FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1443.ptfa, 564 aa vs ./tmplib.26680 library 1768453 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.3248+/-0.00697; mu= -3.5766+/- 0.464 mean_var=242.4415+/-57.910, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0824 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0395 ( 198 res) mbg08208 ( 198) 270 44 1.2e-05 mKIAA4149 ( 906 res) mfj00914 ( 906) 270 45 3.7e-05 mKIAA0854 ( 719 res) mbh04022 ( 719) 214 38 0.0031 >>mKIAA0395 ( 198 res) mbg08208 (198 aa) initn: 393 init1: 258 opt: 270 Z-score: 194.0 bits: 44.3 E(): 1.2e-05 Smith-Waterman score: 323; 33.129% identity (39.416% ungapped) in 163 aa overlap (378-538:12-150) 350 360 370 380 390 400 mKIAA1 PQRLWNNSEPNSAGPTEYLSPDMQHQRKTKRKTKEQLAILKSFFLQCQWARREDYHKLEQ .:: .: .:...:.: :: .:: .. mKIAA0 LVEQPPSKVSYKKTAQQRHLLRQLFVQTQWPSNQDYDSIMA 10 20 30 40 410 420 430 440 450 460 mKIAA1 ITGLPRPEIIQWFGDTRYALKHGQLKWFRDNAVLGTPSFQDPA--IPTPSTRSLKEWAKT :::::::...::::.:::::.:::::..: . : :. . .:..: : mKIAA0 QTGLPRPEVVRWFGDSRYALKNGQLKWYEDYKRGNFP----PGLLVIAPGNREL------ 50 60 70 80 90 470 480 490 500 510 520 mKIAA1 PPLPAPPPPPDIRPLEKYWAAHQQLQEADILKLSQASRLSTQQVLDWFDSRLPKPAEVVV :. :. .:..: : :. : . ...:.::: .:: .. . ...:. mKIAA0 --------------LQDYYMTHKMLCEEDLQTLCDKTQMSAQQVKQWFAEKMGEETRAVA 100 110 120 130 530 540 550 560 mKIAA1 CLDEEDEEDEEDELPEDGEEEEEEEEDDDDGDDDVIIWD .. ::. .. : mKIAA0 DISSEDQGPRNGEPVAVHKVLGDAYSELSENSESWEPSAPEASSEPFDTSSPQSGRQLEA 140 150 160 170 180 190 >>mKIAA4149 ( 906 res) mfj00914 (906 aa) initn: 631 init1: 234 opt: 270 Z-score: 184.9 bits: 44.8 E(): 3.7e-05 Smith-Waterman score: 512; 27.863% identity (34.534% ungapped) in 585 aa overlap (75-554:313-889) 50 60 70 80 90 100 mKIAA1 HDMSPNKDASSLNSSAAGLVCLPPVSEELQLVWTQAIQT--SELDGNEHLLQAFSYFPYP :. ...: : . ::.: ::.... :::: mKIAA4 VVTPTAVLPGLAQVITAVSAQQNSNLLPKVLIPVNSIPTYNAALDNNPLLLNTYNKFPYP 290 300 310 320 330 340 110 120 130 140 150 mKIAA1 SLADIALLCLRHGLQMEKVKTWFMAQRLRCGISWSSEEIEETRAR----VVYHRDQLL-- ....:..: . :..: :: ::::. :.::. ::.::.: . .:. : . mKIAA4 TMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTVHTVPQTITV 350 360 370 380 390 400 160 170 180 mKIAA1 -----------FKSLLSFTQQSVRP-------------PQERPPVLR----PEQVALGLS . :.:. : .: : : .: :.:. . : mKIAA4 IPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGVPNQTNVQKS 410 420 430 440 450 460 190 200 210 220 230 mKIAA1 PLAPSEQP-THMK-GLKVEPEEPSQVSQLPLNHQNA--------KEPLM-----MGSRTF . :. :: : : . . : :: . : . .. :: : . . : mKIAA4 QV-PAAQPATDTKPATAAVPSSPSVRPEAALVNPDSFGIRAKKTKEQLAELKVSYLKNQF 470 480 490 500 510 520 240 250 260 270 280 290 mKIAA1 SHQSDC-QDLQISGLSKEQAGRG-PDQSCGKTASWNHFTAVHQPDKPASVSLLDNSCKEE :.:. . ..:.::.: . . : .. : .. .: . ... ..:.: : mKIAA4 PHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSN-QCLHLNNDSSATIIIDSS-DET 530 540 550 560 570 300 310 320 330 mKIAA1 SEPSGIPPSSSTSS----PSF--QALANGTTATLKPLQPLGCISQSLSPSE--------- :: . :.. .: :.: : . . :. :. :: :. :. : mKIAA4 PEPPAAAASQQKQSWNPFPDFAPQKFKEKTAEQLRALQASFLNSSVLTDEEVNRLRAQTK 580 590 600 610 620 630 340 350 360 370 mKIAA1 ----------------KALSPQ-VEPLWPQRLWNNSEPNSAGP-TEYLSPDMQHQRKTKR :::. . .: . .. ::. ..: : ..: : . mKIAA4 LTRREIDAWFTEKNKTKALKDEKIEVDESNVGSSKEEPGESSPGDETVAPKSGGTGKICK 640 650 660 670 680 690 380 390 400 410 420 430 mKIAA1 KTKEQLAILKSFFLQCQWARREDYHKLEQITGLPRPEIIQWFGDTRYALKHGQLKWFR-- :: ::: .::: :.. :: :.: :: . .:: : .:..:::::::: :.:.:::. mKIAA4 KTPEQLHMLKSAFVRTQWPSAEEYDKLAEESGLARTDIVSWFGDTRYAWKNGNLKWYYYY 700 710 720 730 740 750 440 450 460 470 mKIAA1 ---DNAVL-----------GTPSFQDPAIPTPSTRSLKE---WAKTPPLPAPPPPPDIRP ... : : :. . . : :. :. : ..: : : mKIAA4 QSSNSSSLNGLSSLRRRGRGRPKGRGRGRPRGRPRGGKRMNTWDRVPSLIKFKTGTAI-- 760 770 780 790 800 810 480 490 500 510 520 530 mKIAA1 LEKYWAAHQQLQEADILKLSQASRLSTQQVLDWFDSRLPKPAEVVVCLDEEDEEDEEDEL :. :. :. :.: :. .: . :... .:: .:: : . .:. . : ::.:: :::. mKIAA4 LKDYYLKHKFLNEQDLDELVNRSHMGYEQVREWFAER-QRRSELGIELFEENEE--EDEV 820 830 840 850 860 870 540 550 560 mKIAA1 PEDGEEEEEEEEDDDDGDDDVIIWD .: ::.::: .:.: mKIAA4 VDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD 880 890 900 >>mKIAA0854 ( 719 res) mbh04022 (719 aa) initn: 365 init1: 191 opt: 214 Z-score: 150.3 bits: 38.0 E(): 0.0031 Smith-Waterman score: 268; 21.314% identity (25.751% ungapped) in 563 aa overlap (64-551:129-669) 40 50 60 70 80 90 mKIAA1 RRAVSEGYKPEHDMSPNKDASSLNSSAAGLVCLPP---VSEELQLVWTQAIQTSELDGNE : ::: . .. . . . .: :: : mKIAA0 ARLVTDTAEILARLGSVELLQDSLGHVMPSVQLPPNINLVPKVPVPLNTTKYNSALDTNA 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA1 HLLQAFSYFPYPSLADIALLCLRHGLQMEKVKTWFMAQRLRCGISWSSEEIEETRARVVY ....:. ::::. :... : :... :: .:::. ::::: ::.::.: .. mKIAA0 TMINSFNKFPYPTQAELSWLTAASKHPEEHIRIWFATQRLKHGISWSPEEVEEARKKMFN 160 170 180 190 200 210 160 170 180 190 mKIAA1 HRDQLLFKSLLSFTQQSVRPPQERPPVLR---PEQV----------------ALGLSPLA : . .. . : . : . :.:. : :. ... ::.. mKIAA0 GTIQSVPPTITVLPAQ-LTPTKVSQPILQTALPCQILGQPSLVLTQVTSGSTTVSCSPIT 220 230 240 250 260 270 200 210 220 230 mKIAA1 -----------------PSEQPTHMKGLKVE-PEEPSQVSQLPLN--HQNAKEPLMMGSR :. : . .. :: : .:.. ::. . : :... mKIAA0 LAVAGVTNHGQKRPLVTPQAAPEPKRPHIAQVPEPPPKVANTPLTPASDRKKTKLQIAHL 280 290 300 310 320 330 240 250 260 270 280 mKIAA1 TFSH-QSDCQD-------LQISGLSKEQAGRG-PDQSCGKTASWNHFTAVHQPDKPASVS : ::. : ....::.. . . :. . :.:. ... mKIAA0 KASFLQSQFPDDAEVYRLIEVTGLARSEIKKWFSDHRYRCQRGIVHITSESLAKDQMAIT 340 350 360 370 380 390 290 300 310 320 330 mKIAA1 LLDNSCKEESEPSGIPPSSSTSSP--------SFQALANGTTATLKPLQPLGCISQ---- .. . :. : . . .: :: . : : .. :. .:. mKIAA0 GTRHGRTYHVYPDFAPQKFKEKSQGQLKTLEDSFLKSSFPTQAEVERLRVETKLSRREID 400 410 420 430 440 450 340 350 360 370 mKIAA1 SLSPSEKALSPQVEPLWPQRLWNNSE------PNSAGPT------EYLSPDMQHQRKTKR : .. : ..: . . .... ::.: :. .. .. mKIAA0 SWFSERRKLRDSMEQAVLDSMGSGKKGSDAVAPNGALSRLDQLSGAQLAGSLPSPSSAIV 460 470 480 490 500 510 380 390 400 410 420 430 mKIAA1 KTKEQLAILKSFFLQCQWARREDYHKLEQITGLPRPEIIQWFGDTRYALKHGQLKWFRDN ...::. .:.: : . :: ..: .: ::: : ::..:: ..: :: : :.:... mKIAA0 QNQEQVHLLRSTFARTQWPTPQEYDQLAAKTGLVRTEIVRWFKENRCLLKTGTLSWLEQ- 520 530 540 550 560 570 440 450 460 470 480 490 mKIAA1 AVLGTPSFQDPAIPTPSTRSLKEWAKTPPLPAPPPPPDIRPLEKYWAAHQQLQEADILKL .: . :. :. : : . ..: . :.: : :: mKIAA0 -------YQRHHMSDDRGRDAVS-RKVAKQVAESPKNGSEAAHQYAKDPKALSEEDSEKL 580 590 600 610 620 500 510 520 530 540 550 mKIAA1 SQASRLSTQQVLDWFDSRLPKPAEVVVCLDEEDEEDEEDELPEDGEEEEEEEEDDDDGDD ... . . : . . ::.:.. ....: .::. ::.::. mKIAA0 VPRMKVGGDPTKDCLAG---KPSEAT---------SDRSEGSRDGQGSEENEESGIVDFV 630 640 650 660 670 560 mKIAA1 DVIIWD mKIAA0 EVTVGEEDAISEKWGSWSRRVAEGTVERADSDSDSTPAEAGQA 680 690 700 710 564 residues in 1 query sequences 1768453 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:45:03 2006 done: Mon Mar 27 10:45:04 2006 Scan time: 0.760 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]