# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpg00916.fasta.nr -Q ../query/mKIAA0990.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0990, 821 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919761 sequences Expectation_n fit: rho(ln(x))= 5.0249+/-0.000186; mu= 14.7077+/- 0.010 mean_var=74.8897+/-14.848, 0's: 42 Z-trim: 48 B-trim: 1589 in 1/65 Lambda= 0.148205 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|67462203|sp|Q6ZQ11.2|CHSS1_MOUSE RecName: Full= ( 800) 5407 1165.9 0 gi|149057104|gb|EDM08427.1| carbohydrate (chondroi ( 788) 5227 1127.4 0 gi|73951186|ref|XP_545821.2| PREDICTED: similar to ( 859) 5194 1120.4 0 gi|116241296|sp|Q86X52.3|CHSS1_HUMAN RecName: Full ( 802) 5143 1109.5 0 gi|37182181|gb|AAQ88893.1| CHSY1 [Homo sapiens] ( 802) 5137 1108.2 0 gi|15617453|dbj|BAB64936.1| chondroitin synthase [ ( 802) 5135 1107.8 0 gi|119913522|ref|XP_001250941.1| PREDICTED: chondr ( 803) 5122 1105.0 0 gi|157743178|gb|AAI53828.1| Chsy1 protein [Mus mus ( 756) 5020 1083.2 0 gi|124504599|gb|AAI28568.1| Chsy1 protein [Mus mus ( 747) 4993 1077.4 0 gi|194034522|ref|XP_001926161.1| PREDICTED: simila ( 842) 4763 1028.3 0 gi|126277218|ref|XP_001373151.1| PREDICTED: simila ( 823) 4675 1009.4 0 gi|114659220|ref|XP_523172.2| PREDICTED: carbohydr ( 813) 4604 994.2 0 gi|194206350|ref|XP_001490859.2| PREDICTED: chondr ( 751) 4585 990.1 0 gi|119850888|gb|AAI27294.1| LOC100036707 protein [ ( 812) 4444 960.0 0 gi|224062764|ref|XP_002197962.1| PREDICTED: hypoth ( 748) 4377 945.7 0 gi|118095963|ref|XP_413889.2| PREDICTED: similar t ( 699) 4351 940.1 0 gi|40352710|gb|AAH64670.1| Carbohydrate (chondroit ( 801) 4296 928.4 0 gi|109082546|ref|XP_001084554.1| PREDICTED: simila ( 583) 3753 812.2 0 gi|145559453|sp|Q70JA7.3|CHSS3_HUMAN RecName: Full ( 882) 3606 780.9 0 gi|114601499|ref|XP_001160577.1| PREDICTED: chondr ( 882) 3601 779.8 0 gi|57093919|ref|XP_538613.1| PREDICTED: similar to ( 884) 3598 779.2 0 gi|224088545|ref|XP_002188750.1| PREDICTED: chondr ( 710) 3592 777.8 0 gi|119895088|ref|XP_606561.3| PREDICTED: chondroit ( 882) 3593 778.1 0 gi|194219960|ref|XP_001503128.2| PREDICTED: simila ( 884) 3583 776.0 0 gi|37573674|dbj|BAC98832.1| chondroitin sulfate sy ( 882) 3581 775.5 0 gi|119582783|gb|EAW62379.1| chondroitin sulfate sy ( 727) 3579 775.0 0 gi|41529141|emb|CAE17326.1| chodroitin synthase 2 ( 882) 3561 771.3 0 gi|148675278|gb|EDL07225.1| mCG19971 [Mus musculus ( 866) 3546 768.0 0 gi|62664487|ref|XP_225912.2| PREDICTED: similar to ( 886) 3537 766.1 0 gi|172045941|sp|Q5DTK1.2|CHSS3_MOUSE RecName: Full ( 884) 3523 763.1 0 gi|148677895|gb|EDL09842.1| mCG51595 [Mus musculus ( 884) 3521 762.7 0 gi|109078465|ref|XP_001099447.1| PREDICTED: simila ( 882) 3473 752.4 1.8e-214 gi|109082548|ref|XP_001084436.1| PREDICTED: simila ( 530) 3383 733.0 7.5e-209 gi|194384664|dbj|BAG59492.1| unnamed protein produ ( 530) 3381 732.6 1e-208 gi|149408730|ref|XP_001506710.1| PREDICTED: simila ( 657) 3319 719.4 1.2e-204 gi|151555979|gb|AAI49797.1| CHSY3 protein [Bos tau ( 646) 3283 711.7 2.4e-202 gi|157743058|gb|AAI53827.1| Unknown (protein for I ( 444) 2906 631.0 3.3e-178 gi|47213615|emb|CAF95956.1| unnamed protein produc ( 838) 2881 625.8 2.2e-176 gi|28411190|emb|CAD43233.1| chondroitin synthase 2 ( 573) 2817 612.0 2.2e-172 gi|210109078|gb|EEA56958.1| hypothetical protein B ( 892) 2709 589.1 2.7e-165 gi|118104233|ref|XP_413966.2| PREDICTED: similar t ( 812) 2652 576.9 1.2e-161 gi|189538333|ref|XP_001335846.2| PREDICTED: simila ( 669) 2421 527.4 7.4e-147 gi|115767105|ref|XP_784554.2| PREDICTED: similar t ( 785) 2338 509.7 1.8e-141 gi|210116690|gb|EEA64433.1| hypothetical protein B ( 704) 2292 499.8 1.6e-138 gi|26386606|dbj|BAC25596.1| unnamed protein produc ( 431) 2089 456.3 1.3e-125 gi|210098618|gb|EEA46725.1| hypothetical protein B ( 727) 1893 414.5 7.6e-113 gi|210098643|gb|EEA46750.1| hypothetical protein B (1123) 1734 380.7 1.8e-102 gi|16974773|gb|AAL32463.1|AF440749_1 chondroitin s ( 246) 1648 361.8 2e-97 gi|198433688|ref|XP_002129676.1| PREDICTED: simila (1086) 1592 350.3 2.4e-93 gi|210098644|gb|EEA46751.1| hypothetical protein B ( 769) 1590 349.8 2.5e-93 >>gi|67462203|sp|Q6ZQ11.2|CHSS1_MOUSE RecName: Full=Chon (800 aa) initn: 5407 init1: 5407 opt: 5407 Z-score: 6242.3 bits: 1165.9 E(): 0 Smith-Waterman score: 5407; 100.000% identity (100.000% similar) in 800 aa overlap (22-821:1-800) 10 20 30 40 50 60 mKIAA0 GRAEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGFVLASRLVLPRASELKRVGP ::::::::::::::::::::::::::::::::::::::: gi|674 MAARGRRAWLSMLLGLVLGFVLASRLVLPRASELKRVGP 10 20 30 70 80 90 100 110 120 mKIAA0 RRRPSPEGCRPGQEASQPGGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 RRRPSPEGCRPGQEASQPGGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYLQT 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 RAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHY 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 LDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 LDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCM 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 GGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 GGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYEN 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 YEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 MSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQPPRRGMDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 MSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQPPRRGMDSA 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 QREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 QREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKG 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA0 KKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLKKLVAFQLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 KKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLKKLVAFQLP 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA0 GSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNPDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 GSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNPDK 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA0 AKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDVDLVFTAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 AKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDVDLVFTAEF 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA0 LQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 LQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYK 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA0 GDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCDPNLDPKQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 GDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCDPNLDPKQY 700 710 720 730 740 750 790 800 810 820 mKIAA0 KMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGSARTA ::::::::::::::::::::::::::::::::::::::::: gi|674 KMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGSARTA 760 770 780 790 800 >>gi|149057104|gb|EDM08427.1| carbohydrate (chondroitin) (788 aa) initn: 5250 init1: 5209 opt: 5227 Z-score: 6034.3 bits: 1127.4 E(): 0 Smith-Waterman score: 5227; 98.096% identity (99.112% similar) in 788 aa overlap (33-820:1-787) 10 20 30 40 50 60 mKIAA0 AEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGFVLASRLVLPRASELKRVGPRR :::::::::::::::::::::::::::::: gi|149 MLLGLVLGFVLASRLVLPRASELKRVGPRR 10 20 30 70 80 90 100 110 120 mKIAA0 RPSPEGCRPGQEASQPGGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYLQTRA ::.:::::::: ::::::: :::::::::::::::::::::::::::::::::::::::: gi|149 RPNPEGCRPGQAASQPGGAPGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYLQTRA 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 VAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 KYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGG 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 PGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYE 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 QNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVLMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVLMS 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQPPRRGMDSAQR ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 KYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATEGQPPRRGMDSAQR 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 EALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKK :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EALDDIVLQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKK 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA0 MTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLKKLVAFQLPGS :::::::::::::::::.:::::: :::::::::::::::::::::::::::: :::::: gi|149 MTVPVRRHAYLQQTFSKIQFVEHEGLDAQELADRINQDSGSLSFLSNSLKKLVPFQLPGS 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA0 KTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNPDKAK : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KMEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNPDKAK 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA0 QVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDVDLVFTAEFLQ :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 QVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFSNESLLFFCDVDLVFTAEFLQ 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA0 RCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGD 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA0 LVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCDPNLDPKQYKM ::::::::::::::::::::::::::::::::::::::::::.:::: :::::::::::: gi|149 LVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKM 700 710 720 730 740 750 790 800 810 820 mKIAA0 CLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGSARTA ::::::::::::::::::::::::::::.::. ::::: gi|149 CLGSKASTFGSTQQLAEMWLEKNDPSYSRGGN-GSARTV 760 770 780 >>gi|73951186|ref|XP_545821.2| PREDICTED: similar to car (859 aa) initn: 4822 init1: 4822 opt: 5194 Z-score: 5995.7 bits: 1120.4 E(): 0 Smith-Waterman score: 5194; 93.473% identity (98.276% similar) in 812 aa overlap (12-821:48-859) 10 20 30 40 mKIAA0 GRAEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGF .::::: :.::::::::::::.:::::::: gi|739 EVQVLWTIGNPLHHEGDRSTESPDERRRRRRRPGGRSGTGMAARGRRAWLSVLLGLVLGF 20 30 40 50 60 70 50 60 70 80 90 mKIAA0 VLASRLVLPRASELKRVGPRRRPSPEGCRPGQEA--SQPGGARGDARGAQLWPQGSAAEG ::::::::::::::::.::::: ::::::::: : :: ::::::::::::::.: :..: gi|739 VLASRLVLPRASELKRAGPRRRASPEGCRPGQAAAASQAGGARGDARGAQLWPHGPASDG 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA0 VPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGV :::.::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 GPRDKNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPIVPLRGV 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA0 DDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQT :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|739 DDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQT 200 210 220 230 240 250 220 230 240 250 260 270 mKIAA0 GLGTTEEMGKLALEPGENFCMGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCV :::::::::::::::::::::::::::.::::::::.::::::::::::::::::::::: gi|739 GLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCV 260 270 280 290 300 310 280 290 300 310 320 330 mKIAA0 RRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYM ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|739 RRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYM 320 330 340 350 360 370 340 350 360 370 380 390 mKIAA0 LSRKIAELRHRTIQLHREIVLMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFL :::.::::::::::::::::::.:::.:::. ::::::::::::::: :::::::::::: gi|739 LSRRIAELRHRTIQLHREIVLMGKYSNTEIHPEDLQLGIPPSFMRFQPRQREEILEWEFL 380 390 400 410 420 430 400 410 420 430 440 450 mKIAA0 TGKYLYSATDGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRV ::::::::..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TGKYLYSAAEGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRV 440 450 460 470 480 490 460 470 480 490 500 510 mKIAA0 NPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQ ::::::::::::::::::::::::::::::::::::::::.::::::::::.:::..::: gi|739 NPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFVEHEELDAKELANKINQ 500 510 520 530 540 550 520 530 540 550 560 570 mKIAA0 DSGSLSFLSNSLKKLVAFQLPGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCL .::::::::::::::: :::::::.::::::::::::::::::::::::::::::::::: gi|739 ESGSLSFLSNSLKKLVPFQLPGSKNEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCL 560 570 580 590 600 610 580 590 600 610 620 630 mKIAA0 IPNLNVKLVILLFNSDSNPDKAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSS ::. :::::.::::::::::::::::::::::.::::::::.::::: :::::::::::: gi|739 IPSQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQILPVSGEFSRALALEVGSS 620 630 640 650 660 670 640 650 660 670 680 690 mKIAA0 QFNNESLLFFCDVDLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHF ::::::::::::::::::..:::::::::::::::::::::::::::::::::::::::: gi|739 QFNNESLLFFCDVDLVFTTDFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHF 680 690 700 710 720 730 700 710 720 730 740 750 mKIAA0 AFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQE 740 750 760 770 780 790 760 770 780 790 800 810 mKIAA0 VGVVHIHHPVVCDPNLDPKQYKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGSAR :::::.:::: ::::::::::::::::::::.:::::::::::::.::::::....::.: gi|739 VGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEMWLEKHDPSYSKSSNNGSVR 800 810 820 830 840 850 820 mKIAA0 TA :: gi|739 TA >>gi|116241296|sp|Q86X52.3|CHSS1_HUMAN RecName: Full=Cho (802 aa) initn: 5137 init1: 4819 opt: 5143 Z-score: 5937.2 bits: 1109.5 E(): 0 Smith-Waterman score: 5143; 94.389% identity (98.005% similar) in 802 aa overlap (22-821:1-802) 10 20 30 40 50 60 mKIAA0 GRAEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGFVLASRLVLPRASELKRVGP :::::::::::.::::::::::::::::::::::::.:: gi|116 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGP 10 20 30 70 80 90 100 110 mKIAA0 RRRPSPEGCRPGQEA-SQPGGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYLQ ::: :::::: :: : :: :::::::::::::: :: .: ::::::::::::::::::: gi|116 RRRASPEGCRSGQAAASQAGGARGDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQ 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA0 TRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHDH ::::::::::::::::::.::::::::::.:::::::::::::::::::::::::::::: gi|116 TRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDH 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA0 YLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFC :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|116 YLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFC 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA0 MGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYE :::::::.::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|116 MGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYE 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA0 NYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIV ::::::::::::::.::::.:::::::::::::::::::::::::.:::::::::::::: gi|116 NYEQNKKGYIRDLHNSKIHQAITLHPNKNPPYQYRLHSYMLSRKISELRHRTIQLHREIV 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA0 LMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQPPRRGMDS ::::::.:::.:::::::::::::::: ::::::::::::::::::::.::::::::::: gi|116 LMSKYSNTEIHKEDLQLGIPPSFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDS 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA0 AQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 AQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHK 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 GKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLKKLVAFQL ::::::::::::::::::::.:::::::::::::: ::::.::::::::::::::: ::: gi|116 GKKMTVPVRRHAYLQQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQL 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 PGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNPD ::::.::::::.::::::::::::::::::::::::::::::: :::::.:::::::::: gi|116 PGSKSEHKEPKDKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPD 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA0 KAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDVDLVFTAE ::::::::::::.::::::::.::::: ::::::::::::::::::::::::::::::.: gi|116 KAKQVELMRDYRIKYPKADMQILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTE 580 590 600 610 620 630 660 670 680 690 700 710 mKIAA0 FLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 FLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIY 640 650 660 670 680 690 720 730 740 750 760 770 mKIAA0 KGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCDPNLDPKQ :::::::::::::::::::::::::::::::::::::::::::::.:::: ::::::::: gi|116 KGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQ 700 710 720 730 740 750 780 790 800 810 820 mKIAA0 YKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSH-GSARTA :::::::::::.::::::::::::::::::::.... ::.::: gi|116 YKMCLGSKASTYGSTQQLAEMWLEKNDPSYSKSSNNNGSVRTA 760 770 780 790 800 >>gi|37182181|gb|AAQ88893.1| CHSY1 [Homo sapiens] (802 aa) initn: 5131 init1: 4813 opt: 5137 Z-score: 5930.2 bits: 1108.2 E(): 0 Smith-Waterman score: 5137; 94.264% identity (98.005% similar) in 802 aa overlap (22-821:1-802) 10 20 30 40 50 60 mKIAA0 GRAEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGFVLASRLVLPRASELKRVGP :::::::::::.::::::::::::::::::::::::.:: gi|371 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGP 10 20 30 70 80 90 100 110 mKIAA0 RRRPSPEGCRPGQEA-SQPGGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYLQ ::: :::::: :: : :: :::::::::::::: :: .: ::::::::::::::::::: gi|371 RRRASPEGCRSGQAAASQAGGARGDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQ 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA0 TRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHDH ::::::::::::::::::.::::::::::.:::::::::::::::::::::::::::::: gi|371 TRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDH 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA0 YLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFC :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|371 YLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFC 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA0 MGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYE :::::::.::::::::.:::::::::::::::::::::::::::::::::::::.::::: gi|371 MGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMRQLFYE 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA0 NYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIV ::::::::::::::.::::.:::::::::::::::::::::::::.:::::::::::::: gi|371 NYEQNKKGYIRDLHNSKIHQAITLHPNKNPPYQYRLHSYMLSRKISELRHRTIQLHREIV 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA0 LMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQPPRRGMDS ::::::.:::.:::::::::::::::: ::::::::::::::::::::.::::::::::: gi|371 LMSKYSNTEIHKEDLQLGIPPSFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDS 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA0 AQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 AQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHK 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 GKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLKKLVAFQL ::::::::::::::::::::.:::::::::::::: ::::.::::::::::::::: ::: gi|371 GKKMTVPVRRHAYLQQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQL 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 PGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNPD ::::.::::::.::::::::::::::::::::::::::::::: :::::.:::::::::: gi|371 PGSKSEHKEPKDKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPD 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA0 KAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDVDLVFTAE ::::::::::::.::::::::.::::: ::::::::::::::::::::::::::::::.: gi|371 KAKQVELMRDYRIKYPKADMQILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTE 580 590 600 610 620 630 660 670 680 690 700 710 mKIAA0 FLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 FLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIY 640 650 660 670 680 690 720 730 740 750 760 770 mKIAA0 KGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCDPNLDPKQ :::::::::::::::::::::::::::::::::::::::::::::.:::: ::::::::: gi|371 KGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQ 700 710 720 730 740 750 780 790 800 810 820 mKIAA0 YKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSH-GSARTA :::::::::::.::::::::::::::::::::.... ::.::: gi|371 YKMCLGSKASTYGSTQQLAEMWLEKNDPSYSKSSNNNGSVRTA 760 770 780 790 800 >>gi|15617453|dbj|BAB64936.1| chondroitin synthase [Homo (802 aa) initn: 5129 init1: 4811 opt: 5135 Z-score: 5927.9 bits: 1107.8 E(): 0 Smith-Waterman score: 5135; 94.264% identity (97.880% similar) in 802 aa overlap (22-821:1-802) 10 20 30 40 50 60 mKIAA0 GRAEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGFVLASRLVLPRASELKRVGP :::::::::::.::::::::::::::::::::::::.:: gi|156 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGP 10 20 30 70 80 90 100 110 mKIAA0 RRRPSPEGCRPGQEA-SQPGGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYLQ ::: :::::: :: : :: :::::::::::::: :: .: ::::::::::::::::::: gi|156 RRRASPEGCRSGQAAASQAGGARGDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQ 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA0 TRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHDH ::::::::::::::::::.::::::::::.:::::::::::::::::::::::::::::: gi|156 TRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDH 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA0 YLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFC :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|156 YLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFC 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA0 MGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYE :::::::.::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|156 MGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYE 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA0 NYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIV ::::::::::::::.::::.:::::::::::::::::::::::::.:::::::::::::: gi|156 NYEQNKKGYIRDLHNSKIHQAITLHPNKNPPYQYRLHSYMLSRKISELRHRTIQLHREIV 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA0 LMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQPPRRGMDS ::::::.:::.:::::::::::::::: ::::::::::::::::::::.::::::::::: gi|156 LMSKYSNTEIHKEDLQLGIPPSFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDS 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA0 AQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 AQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHK 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 GKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLKKLVAFQL ::::::::::::::::::::.:::::::::::::: ::::.::::::::::::::: ::: gi|156 GKKMTVPVRRHAYLQQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQL 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 PGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNPD ::::.::::::.::::::::::::::::::::::::::::::: :::::.:::::::::: gi|156 PGSKSEHKEPKDKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPD 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA0 KAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDVDLVFTAE :::::::: :::.::::::::.::::: ::::::::::::::::::::::::::::::.: gi|156 KAKQVELMTDYRIKYPKADMQILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTE 580 590 600 610 620 630 660 670 680 690 700 710 mKIAA0 FLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 FLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIY 640 650 660 670 680 690 720 730 740 750 760 770 mKIAA0 KGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCDPNLDPKQ :::::::::::::::::::::::::::::::::::::::::::::.:::: ::::::::: gi|156 KGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQ 700 710 720 730 740 750 780 790 800 810 820 mKIAA0 YKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSH-GSARTA :::::::::::.::::::::::::::::::::.... ::.::: gi|156 YKMCLGSKASTYGSTQQLAEMWLEKNDPSYSKSSNNNGSVRTA 760 770 780 790 800 >>gi|119913522|ref|XP_001250941.1| PREDICTED: chondroiti (803 aa) initn: 5105 init1: 4789 opt: 5122 Z-score: 5912.9 bits: 1105.0 E(): 0 Smith-Waterman score: 5122; 93.773% identity (98.132% similar) in 803 aa overlap (22-821:1-803) 10 20 30 40 50 60 mKIAA0 GRAEPAAGTAGQRPGGRRGAGMAARGRRAWLSMLLGLVLGFVLASRLVLPRASELKRVGP ::.::::::::.::::::::::::::::::::::::.:: gi|119 MAVRGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGP 10 20 30 70 80 90 100 110 mKIAA0 RRRPSPEGCRPGQEASQP--GGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVMTAQKYL ::: :::.::::: :. : ::::::::: .:::.: : .:::::::::::::::::::: gi|119 RRRASPEACRPGQAAAVPLAGGARGDARGQRLWPHGEAQDGVPRDRNFLFVGVMTAQKYL 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA0 QTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMMLKYMHD :::::::.::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|119 QTRAVAAFRTWSKTIPGKVEFFSSEGSDTSISIPVVPLRGVDDSYPPQKKSFMMLKYMHD 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA0 HYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENF 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA0 CMGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFY ::::::::.::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|119 CMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFY 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA0 ENYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREI :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|119 ENYEQNKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREI 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA0 VLMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQPPRRGMD :::::::.::..:::::::::::::::: ::::::::::::::::::::.:.:::::::: gi|119 VLMSKYSNTEVHKEDLQLGIPPSFMRFQPRQREEILEWEFLTGKYLYSAADSQPPRRGMD 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA0 SAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKH 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 KGKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLKKLVAFQ :::::::::::::::::::::.::::::::::.:::..:::.::::::::::::::: :: gi|119 KGKKMTVPVRRHAYLQQTFSKIQFVEHEELDAKELANKINQESGSLSFLSNSLKKLVPFQ 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 LPGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLFNSDSNP :::::.:::::::::::::::::::::::::::::::::::::: :::::.::::::::: gi|119 LPGSKNEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNP 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA0 DKAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDVDLVFTA :::::::::::::.::::::::.::::: ::::::::::::::::::::::::::::::: gi|119 DKAKQVELMRDYRIKYPKADMQILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTA 580 590 600 610 620 630 660 670 680 690 700 710 mKIAA0 EFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCI 640 650 660 670 680 690 720 730 740 750 760 770 mKIAA0 YKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCDPNLDPK ::::::::::::::::::::::::::::::::::::::::::::::.:::: :::::::: gi|119 YKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPK 700 710 720 730 740 750 780 790 800 810 820 mKIAA0 QYKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSH-GSARTA ::::::::::::.:::.::::::::::::.:::.... ::.::: gi|119 QYKMCLGSKASTYGSTHQLAEMWLEKNDPNYSKSSNNNGSVRTA 760 770 780 790 800 >>gi|157743178|gb|AAI53828.1| Chsy1 protein [Mus musculu (756 aa) initn: 5020 init1: 5020 opt: 5020 Z-score: 5795.4 bits: 1083.2 E(): 0 Smith-Waterman score: 5020; 98.674% identity (99.072% similar) in 754 aa overlap (68-821:3-756) 40 50 60 70 80 90 mKIAA0 VLGFVLASRLVLPRASELKRVGPRRRPSPEGCRPGQEASQPGGARGDARGAQLWPQGSAA :: .. :. ::::::::::::::::: gi|157 AGGCAAAEAAQGTERARGDARGAQLWPQGSAA 10 20 30 100 110 120 130 140 150 mKIAA0 EGVPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 EGVPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLR 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA0 GVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 GVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLG 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA0 QTGLGTTEEMGKLALEPGENFCMGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 QTGLGTTEEMGKLALEPGENFCMGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGR 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA0 CVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 CVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHS 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA0 YMLSRKIAELRHRTIQLHREIVLMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 YMLSRKIAELRHRTIQLHREIVLMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA0 FLTGKYLYSATDGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 FLTGKYLYSATDGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYR 340 350 360 370 380 390 460 470 480 490 500 510 mKIAA0 RVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 RVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRI 400 410 420 430 440 450 520 530 540 550 560 570 mKIAA0 NQDSGSLSFLSNSLKKLVAFQLPGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 NQDSGSLSFLSNSLKKLVAFQLPGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKT 460 470 480 490 500 510 580 590 600 610 620 630 mKIAA0 CLIPNLNVKLVILLFNSDSNPDKAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 CLIPNLNVKLVILLFNSDSNPDKAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVG 520 530 540 550 560 570 640 650 660 670 680 690 mKIAA0 SSQFNNESLLFFCDVDLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 SSQFNNESLLFFCDVDLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDN 580 590 600 610 620 630 700 710 720 730 740 750 mKIAA0 HFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 HFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRS 640 650 660 670 680 690 760 770 780 790 800 810 mKIAA0 QEVGVVHIHHPVVCDPNLDPKQYKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 QEVGVVHIHHPVVCDPNLDPKQYKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGS 700 710 720 730 740 750 820 mKIAA0 ARTA :::: gi|157 ARTA >>gi|124504599|gb|AAI28568.1| Chsy1 protein [Mus musculu (747 aa) initn: 4993 init1: 4993 opt: 4993 Z-score: 5764.3 bits: 1077.4 E(): 0 Smith-Waterman score: 4993; 100.000% identity (100.000% similar) in 739 aa overlap (83-821:9-747) 60 70 80 90 100 110 mKIAA0 SELKRVGPRRRPSPEGCRPGQEASQPGGARGDARGAQLWPQGSAAEGVPRDRNFLFVGVM :::::::::::::::::::::::::::::: gi|124 RRMCSCRGGDARGAQLWPQGSAAEGVPRDRNFLFVGVM 10 20 30 120 130 140 150 160 170 mKIAA0 TAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 TAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIPIPVVPLRGVDDSYPPQKKSFMM 40 50 60 70 80 90 180 190 200 210 220 230 mKIAA0 LKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 LKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRSLNSSEPLFLGQTGLGTTEEMGKLAL 100 110 120 130 140 150 240 250 260 270 280 290 mKIAA0 EPGENFCMGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 EPGENFCMGGPGVILSREVLRRMAPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYE 160 170 180 190 200 210 300 310 320 330 340 350 mKIAA0 MQQLFYENYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 MQQLFYENYEQNKKGYIRDLHSSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTI 220 230 240 250 260 270 360 370 380 390 400 410 mKIAA0 QLHREIVLMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 QLHREIVLMSKYSSTEIQKEDLQLGIPPSFMRFQARQREEILEWEFLTGKYLYSATDGQP 280 290 300 310 320 330 420 430 440 450 460 470 mKIAA0 PRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 PRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLL 340 350 360 370 380 390 480 490 500 510 520 530 mKIAA0 LLYKKHKGKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 LLYKKHKGKKMTVPVRRHAYLQQTFSKMQFVEHEELDAQELADRINQDSGSLSFLSNSLK 400 410 420 430 440 450 540 550 560 570 580 590 mKIAA0 KLVAFQLPGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 KLVAFQLPGSKTEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNLNVKLVILLF 460 470 480 490 500 510 600 610 620 630 640 650 mKIAA0 NSDSNPDKAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 NSDSNPDKAKQVELMRDYRVKYPKADMQVLPVSGGFSRALALEVGSSQFNNESLLFFCDV 520 530 540 550 560 570 660 670 680 690 700 710 mKIAA0 DLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYG 580 590 600 610 620 630 720 730 740 750 760 770 mKIAA0 FGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHIHHPVVCD 640 650 660 670 680 690 780 790 800 810 820 mKIAA0 PNLDPKQYKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGSARTA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 PNLDPKQYKMCLGSKASTFGSTQQLAEMWLEKNDPSYSKGGSHGSARTA 700 710 720 730 740 >>gi|194034522|ref|XP_001926161.1| PREDICTED: similar to (842 aa) initn: 4759 init1: 4722 opt: 4763 Z-score: 5497.8 bits: 1028.3 E(): 0 Smith-Waterman score: 4771; 86.396% identity (91.169% similar) in 838 aa overlap (15-821:15-842) 10 20 30 40 50 mKIAA0 GRAEPAAGTAGQRPGGRRGAGMA-ARGRRAWLSMLLGLVLGFVLA-SRLVLPRASELKRV ::: ..:. ::::: : . : .:: :: :. :. gi|194 MCSGGSGAGHEEDGGGRSASGVKPARGRRQ----------GETGARTRLPLPWPSHWPRA 10 20 30 40 50 60 70 80 90 mKIAA0 GPRRRPSPEGCRPGQEAS-----QP----G-GARG------------------DARGAQL :.: : : :. :. .: : :.:: : ::::: gi|194 PAREREEPPPSRAGDAAGARRAWSPLKDAGLGGRGGRVPARQRPGFPSPWGSSDERGAQL 60 70 80 90 100 110 100 110 120 130 140 150 mKIAA0 WPQGSAAEGVPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIP ::.: .: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 WPHGPQRDGGQRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEFFSSEGSDTSIP 120 130 140 150 160 170 160 170 180 190 200 210 mKIAA0 IPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLESFLRSLNS ::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|194 IPIVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNS 180 190 200 210 220 230 220 230 240 250 260 270 mKIAA0 SEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVILSREVLRRMAPHIGKCLREMYTTH ::::::::::::::::::::::::::::::::::::.::::::::.:::::::::::::: gi|194 SEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTH 240 250 260 270 280 290 280 290 300 310 320 330 mKIAA0 EDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHSSKIHRAITLHPNKNPP :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|194 EDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHRAITLHPNKNPP 300 310 320 330 340 350 340 350 360 370 380 390 mKIAA0 YQYRLHSYMLSRKIAELRHRTIQLHREIVLMSKYSSTEIQKEDLQLGIPPSFMRFQARQR :::::::::::::::::::::::::::::::::::.:::.:::::::: ::::::: ::: gi|194 YQYRLHSYMLSRKIAELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIAPSFMRFQPRQR 360 370 380 390 400 410 400 410 420 430 440 450 mKIAA0 EEILEWEFLTGKYLYSATDGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFK :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|194 EEILEWEFLTGKYLYSAADGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFK 420 430 440 450 460 470 460 470 480 490 500 510 mKIAA0 EIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKMQFVEHEELDA :::::::::::::::::::::::::::::::::::::::::::::::::.:::::: ::: gi|194 EIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFVEHEGLDA 480 490 500 510 520 530 520 530 540 550 560 570 mKIAA0 QELADRINQDSGSLSFLSNSLKKLVAFQLPGSKTEHKEPKEKKINILIPLSGRFDMFVRF .::::::::.::::::::::::::: :::::::.:::::::::::::::::::::::::: gi|194 KELADRINQESGSLSFLSNSLKKLVPFQLPGSKNEHKEPKEKKINILIPLSGRFDMFVRF 540 550 560 570 580 590 580 590 600 610 620 630 mKIAA0 MGNFEKTCLIPNLNVKLVILLFNSDSNPDKAKQVELMRDYRVKYPKADMQVLPVSGGFSR :::::::::::: :::::.::::::::::::::::::::::.::::::::.::::: ::: gi|194 MGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQILPVSGEFSR 600 610 620 630 640 650 640 650 660 670 680 690 mKIAA0 ALALEVGSSQFNNESLLFFCDVDLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYS :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ALALEVGSSQFHNESLLFFCDVDLVFTAEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYS 660 670 680 690 700 710 700 710 720 730 740 750 mKIAA0 GKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQA 720 730 740 750 760 770 760 770 780 790 800 810 mKIAA0 GLKTFRSQEVGVVHIHHPVVCDPNLDPKQYKMCLGSKASTFGSTQQLAEMWLEKNDPSYS ::::::::::::::.:::: :::::::.::::::::::::.::::::::::::::::.: gi|194 GLKTFRSQEVGVVHVHHPVFCDPNLDPRQYKMCLGSKASTYGSTQQLAEMWLEKNDPNYR 780 790 800 810 820 830 820 mKIAA0 KGGSH-GSARTA ..... ::.::: gi|194 RSSNNNGSVRTA 840 821 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 10:59:03 2009 done: Tue Mar 17 11:07:20 2009 Total Scan time: 1091.670 Total Display time: 0.380 Function used was FASTA [version 34.26.5 April 26, 2007]