# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpg00887.fasta.nr -Q ../query/mKIAA1851.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA1851, 705 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7906658 sequences
Expectation_n fit: rho(ln(x))= 4.8736+/-0.000188; mu= 14.6302+/- 0.011
mean_var=76.7384+/-14.723, 0's: 36 Z-trim: 120 B-trim: 12 in 1/65
Lambda= 0.146409
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|73985503|ref|XP_850642.1| PREDICTED: similar to ( 876) 3921 838.2 0
gi|68052349|sp|Q8C2S7.1|AMGO3_MOUSE RecName: Full= ( 508) 3458 740.2 4.3e-211
gi|68051982|sp|Q80ZD5.1|AMGO3_RAT RecName: Full=Am ( 508) 3216 689.1 1e-195
gi|109039650|ref|XP_001107400.1| PREDICTED: simila ( 504) 2620 563.2 8.2e-158
gi|68052343|sp|Q86WK7.1|AMGO3_HUMAN RecName: Full= ( 504) 2609 560.9 4.1e-157
gi|72533373|gb|AAI01366.1| Adhesion molecule with ( 504) 2599 558.7 1.8e-156
gi|26324562|dbj|BAC26035.1| unnamed protein produc ( 243) 1511 328.6 1.6e-87
gi|81875204|sp|Q8BTZ7.1|GMPPB_MOUSE RecName: Full= ( 360) 1300 284.2 5.5e-74
gi|149018555|gb|EDL77196.1| GDP-mannose pyrophosph ( 360) 1299 284.0 6.4e-74
gi|109039623|ref|XP_001106890.1| PREDICTED: simila ( 360) 1278 279.6 1.4e-72
gi|160013885|sp|Q9Y5P6.2|GMPPB_HUMAN RecName: Full ( 360) 1264 276.6 1.1e-71
gi|5052351|gb|AAD38516.1|AF135421_1 GDP-mannose py ( 360) 1258 275.4 2.6e-71
gi|194221308|ref|XP_001494237.2| PREDICTED: simila ( 296) 1256 274.9 3e-71
gi|73985501|ref|XP_541882.2| PREDICTED: similar to ( 360) 1255 274.7 4e-71
gi|122138202|sp|Q2YDJ9.1|GMPPB_BOVIN RecName: Full ( 360) 1247 273.0 1.3e-70
gi|160011348|sp|P0C5I2.1|GMPPB_PIG RecName: Full=M ( 360) 1234 270.3 8.7e-70
gi|118096735|ref|XP_414268.2| PREDICTED: similar t ( 439) 1127 247.8 6.4e-63
gi|224065863|ref|XP_002190824.1| PREDICTED: putati ( 340) 1122 246.6 1.1e-62
gi|82182098|sp|Q6DBU5.1|GMPPB_DANRE RecName: Full= ( 360) 1106 243.2 1.2e-61
gi|82181763|sp|Q68EY9.1|GMPBA_XENLA RecName: Full= ( 360) 1093 240.5 8e-61
gi|82181704|sp|Q68EQ1.1|GMPPB_XENTR RecName: Full= ( 360) 1085 238.8 2.6e-60
gi|160011330|sp|A2VD83.1|GMPBB_XENLA RecName: Full ( 360) 1079 237.5 6.2e-60
gi|94469186|gb|ABF18442.1| GDP-mannose pyrophospho ( 360) 1039 229.1 2.2e-57
gi|157012864|gb|EDO63272.1| AGAP001299-PA [Anophel ( 360) 1038 228.9 2.5e-57
gi|215501609|gb|EEC11103.1| GDP-mannose pyrophosph ( 329) 1027 226.5 1.2e-56
gi|189238443|ref|XP_974073.2| PREDICTED: similar t ( 359) 1014 223.8 8.4e-56
gi|109039626|ref|XP_001106755.1| PREDICTED: simila ( 387) 1012 223.4 1.2e-55
gi|169154896|emb|CAQ14854.1| novel protein similar ( 488) 1013 223.7 1.2e-55
gi|193917059|gb|EDW15926.1| GI10243 [Drosophila mo ( 371) 1011 223.2 1.3e-55
gi|194133361|gb|EDW54877.1| GM10777 [Drosophila se ( 369) 1006 222.1 2.8e-55
gi|190628783|gb|EDV44307.1| GF18913 [Drosophila an ( 371) 1004 221.7 3.7e-55
gi|148725834|emb|CAN88395.1| novel protein similar ( 486) 1003 221.6 5.2e-55
gi|121990043|sp|Q295Y7.1|GMPPB_DROPS RecName: Full ( 371) 1001 221.1 5.8e-55
gi|194143344|gb|EDW59747.1| GJ11048 [Drosophila vi ( 371) 1000 220.9 6.7e-55
gi|190650568|gb|EDV47823.1| GG12578 [Drosophila er ( 369) 999 220.7 7.7e-55
gi|122129600|sp|Q7JZB4.1|GMPPB_DROME RecName: Full ( 369) 998 220.4 9e-55
gi|119585416|gb|EAW65012.1| GDP-mannose pyrophosph ( 387) 998 220.5 9.3e-55
gi|194182088|gb|EDW95699.1| GE25436 [Drosophila ya ( 369) 996 220.0 1.2e-54
gi|193895976|gb|EDV94842.1| GH23007 [Drosophila gr ( 371) 995 219.8 1.4e-54
gi|114586919|ref|XP_001165804.1| PREDICTED: GDP-ma ( 387) 992 219.2 2.2e-54
gi|10436672|dbj|BAB14882.1| unnamed protein produc ( 387) 992 219.2 2.2e-54
gi|194170119|gb|EDW85020.1| GK12822 [Drosophila wi ( 371) 990 218.8 2.9e-54
gi|156224577|gb|EDO45402.1| predicted protein [Nem ( 360) 988 218.3 3.8e-54
gi|125851929|ref|XP_695083.2| PREDICTED: similar t ( 483) 980 216.8 1.5e-53
gi|193690703|ref|XP_001946280.1| PREDICTED: simila ( 364) 978 216.2 1.7e-53
gi|110764629|ref|XP_392845.3| PREDICTED: similar t ( 359) 976 215.8 2.2e-53
gi|47223144|emb|CAG11279.1| unnamed protein produc ( 460) 969 214.4 7.3e-53
gi|210109562|gb|EEA57431.1| hypothetical protein B ( 360) 963 213.0 1.5e-52
gi|210101408|gb|EEA49473.1| hypothetical protein B ( 360) 963 213.0 1.5e-52
gi|156539647|ref|XP_001598989.1| PREDICTED: simila ( 359) 962 212.8 1.7e-52
>>gi|73985503|ref|XP_850642.1| PREDICTED: similar to GDP (876 aa)
initn: 4084 init1: 3921 opt: 3921 Z-score: 4471.6 bits: 838.2 E(): 0
Smith-Waterman score: 3921; 81.986% identity (91.631% similar) in 705 aa overlap (1-705:172-876)
10 20 30
mKIAA1 NAGMYILSPAVLQRIQLKPTSIEKEIFPVM
:::::::.:.::.::::.::::::::::::
gi|739 SKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILNPTVLRRIQLQPTSIEKEIFPVM
150 160 170 180 190 200
40 50 60 70 80 90
mKIAA1 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSAR
::::::::::::::::::::::::::::::::::::::.::.: ::::::::::::::::
gi|739 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPEQLCSGPGIVGNVLVDPSAR
210 220 230 240 250 260
100 110 120 130 140 150
mKIAA1 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME
270 280 290 300 310 320
160 170 180 190 200 210
mKIAA1 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCM
::::::::::::::::::::::::::::::::::::::: :::::: :::::: : ::::
gi|739 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIMSSSLVVTTMAWLVLLGALLCM
330 340 350 360 370 380
220 230 240 250 260 270
mKIAA1 LGAGLGTSDLEDVLPPAPHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNAL
.:.:. : :: ::::: :.::::.::::: ::::.:.:::..::.::::::::
gi|739 SRVGVGSLGTEGFLPSMPHNCPYKCVCAADLLSCAGLGLQDVPAALPAAAADLDLSHNAL
390 400 410 420 430 440
280 290 300 310 320 330
mKIAA1 KRLHPGWLAPLSRLRALHLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLE
.::.:::::::::::::.::.:.:.:::.:.:::::.:: :::::: :: : ::::::
gi|739 QRLRPGWLAPLSRLRALRLGHNELDVLGRGVFTNASALRLLDLSSNALRALGRHDLDGLG
450 460 470 480 490 500
340 350 360 370 380 390
mKIAA1 ELEKLLLFNNSLMHLDLDAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSN
::.:::::: : :::. ::.:: ::.:::.:::::::::.:::::: :.:::::::::
gi|739 ALERLLLFNNRLAHLDVHAFRGLGALSRLYLGCNELSSFSFDHLHGLGTTHLRTLDLSSN
510 520 530 540 550 560
400 410 420 430 440 450
mKIAA1 WLKHISIPELAALPTYLKNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLV
. .: . .:::::..::: :::::::::::: :::.::::.::::::. :: ::: ::.
gi|739 RVGRIPVAHLAALPAFLKNGLYLHNNPLPCDCRLYHVLRRWQQRGLSAVSDFAREYMCLA
570 580 590 600 610 620
460 470 480 490 500 510
mKIAA1 FKVSESRVRFFEHSRVFKNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVS
::: ::::::::::.:.:::.: : ::: ::::::.:.:.:: : ::::.::.::::::
gi|739 FKVLASRVRFFEHSRIFQNCSTALARGLERPEEQLHVQMGRSLTLRCNTSAPAVRVAWVS
630 640 650 660 670 680
520 530 540 550 560 570
mKIAA1 PKNELLVAPASQDGSIAVLADGSLAIGRVQEQHAGVFVCLASGPRLHHNQTLEYNVSVQK
:..::::::.::::::.:::::::::. :: :: ::::::::::::::::: ::::::.
gi|739 PQHELLVAPGSQDGSISVLADGSLAISNVQPQHEGVFVCLASGPRLHHNQTHEYNVSVHF
690 700 710 720 730 740
580 590 600 610 620 630
mKIAA1 ARPEPETFNTGFTTLLGCIVGLVLVLLYLFAPPCRGCCHCCQRACRNRCWPRASSPLQEL
.::::.::::::::::: ::::::::::::::: :: .: .:.:: :::::: :::.::
gi|739 PHPEPEAFNTGFTTLLGCAVGLVLVLLYLFAPPCPGCRRCYRRTCRCRCWPRAPSPLREL
750 760 770 780 790 800
640 650 660 670 680 690
mKIAA1 SAQSSMLSTTPPDAPSRKASVHKHVVFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAG
:::::.:::::::.:::::::::::::::::..:::::::::::::::: ::.:::::::
gi|739 SAQSSVLSTTPPDVPSRKASVHKHVVFLEPGRRGLNGRVQLAVAEDFDLYNPVGLQLKAG
810 820 830 840 850 860
700
mKIAA1 SESASSTGSEGLVMS
::::::::::::::.
gi|739 SESASSTGSEGLVMT
870
>>gi|68052349|sp|Q8C2S7.1|AMGO3_MOUSE RecName: Full=Amph (508 aa)
initn: 3458 init1: 3458 opt: 3458 Z-score: 3946.1 bits: 740.2 E(): 4.3e-211
Smith-Waterman score: 3458; 100.000% identity (100.000% similar) in 508 aa overlap (198-705:1-508)
170 180 190 200 210 220
mKIAA1 NGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCMLGAGLGTSDLEDVLPPA
::::::::::::::::::::::::::::::
gi|680 MAWLVLSGILLCMLGAGLGTSDLEDVLPPA
10 20 30
230 240 250 260 270 280
mKIAA1 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
40 50 60 70 80 90
290 300 310 320 330 340
mKIAA1 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
100 110 120 130 140 150
350 360 370 380 390 400
mKIAA1 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
160 170 180 190 200 210
410 420 430 440 450 460
mKIAA1 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVFKVSESRVRFFEHSRVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVFKVSESRVRFFEHSRVF
220 230 240 250 260 270
470 480 490 500 510 520
mKIAA1 KNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVSPKNELLVAPASQDGSIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 KNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVSPKNELLVAPASQDGSIA
280 290 300 310 320 330
530 540 550 560 570 580
mKIAA1 VLADGSLAIGRVQEQHAGVFVCLASGPRLHHNQTLEYNVSVQKARPEPETFNTGFTTLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 VLADGSLAIGRVQEQHAGVFVCLASGPRLHHNQTLEYNVSVQKARPEPETFNTGFTTLLG
340 350 360 370 380 390
590 600 610 620 630 640
mKIAA1 CIVGLVLVLLYLFAPPCRGCCHCCQRACRNRCWPRASSPLQELSAQSSMLSTTPPDAPSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 CIVGLVLVLLYLFAPPCRGCCHCCQRACRNRCWPRASSPLQELSAQSSMLSTTPPDAPSR
400 410 420 430 440 450
650 660 670 680 690 700
mKIAA1 KASVHKHVVFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAGSESASSTGSEGLVMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|680 KASVHKHVVFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAGSESASSTGSEGLVMS
460 470 480 490 500
>>gi|68051982|sp|Q80ZD5.1|AMGO3_RAT RecName: Full=Amphot (508 aa)
initn: 3216 init1: 3216 opt: 3216 Z-score: 3669.9 bits: 689.1 E(): 1e-195
Smith-Waterman score: 3216; 91.732% identity (97.835% similar) in 508 aa overlap (198-705:1-508)
170 180 190 200 210 220
mKIAA1 NGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCMLGAGLGTSDLEDVLPPA
:::::: :.:::::::: :::::: ::::
gi|680 MAWLVLLGLLLCMLGAGSGTSDLEGVLPPD
10 20 30
230 240 250 260 270 280
mKIAA1 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
:::::. :.:::::::::::::::::.:::.:::::::::::::::::::::::::::::
gi|680 PHNCPNKCVCAADVLSCAGRGLQDLPAALPATAAELDLSHNALKRLHPGWLAPLSRLRAL
40 50 60 70 80 90
290 300 310 320 330 340
mKIAA1 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
.::::::.:::.:.:::::::: ::::::.:: :.:.:::::::::::::::: ::::::
gi|680 YLGYNKLDVLGRGVFTNASGLRILDLSSNLLRRLRTYDLDGLEELEKLLLFNNRLMHLDL
100 110 120 130 140 150
350 360 370 380 390 400
mKIAA1 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
:::::: :::::::::::::::::::::::::::::::::::::: :.:.::::::::.:
gi|680 DAFQGLSMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLGHVSVPELAALPTFL
160 170 180 190 200 210
410 420 430 440 450 460
mKIAA1 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVFKVSESRVRFFEHSRVF
::::::::::::::::::::::::::::::::::::::::::.:::.:::::::::::::
gi|680 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLAFKVAESRVRFFEHSRVF
220 230 240 250 260 270
470 480 490 500 510 520
mKIAA1 KNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVSPKNELLVAPASQDGSIA
::::::::::::::::.::..:::::::::::.:::.:::::::::::::::.:::::::
gi|680 KNCSVAAAPGLELPEEELHTHVGQSLRLFCNTTVPAARVAWVSPKNELLVAPGSQDGSIA
280 290 300 310 320 330
530 540 550 560 570 580
mKIAA1 VLADGSLAIGRVQEQHAGVFVCLASGPRLHHNQTLEYNVSVQKARPEPETFNTGFTTLLG
::::::::::::::::::.::::::::::::::::::::::.: :::::.::::::::::
gi|680 VLADGSLAIGRVQEQHAGLFVCLASGPRLHHNQTLEYNVSVHKPRPEPEAFNTGFTTLLG
340 350 360 370 380 390
590 600 610 620 630 640
mKIAA1 CIVGLVLVLLYLFAPPCRGCCHCCQRACRNRCWPRASSPLQELSAQSSMLSTTPPDAPSR
:::::::::::::::::::::.::.:::::::::::::::::::::::.:::::::::::
gi|680 CIVGLVLVLLYLFAPPCRGCCRCCRRACRNRCWPRASSPLQELSAQSSVLSTTPPDAPSR
400 410 420 430 440 450
650 660 670 680 690 700
mKIAA1 KASVHKHVVFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAGSESASSTGSEGLVMS
::::::::.::::::::::::::::::::::::::::::::::::::::::::::.::
gi|680 KASVHKHVAFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAGSESASSTGSEGLMMS
460 470 480 490 500
>>gi|109039650|ref|XP_001107400.1| PREDICTED: similar to (504 aa)
initn: 2094 init1: 2094 opt: 2620 Z-score: 2989.5 bits: 563.2 E(): 8.2e-158
Smith-Waterman score: 2620; 77.183% identity (88.294% similar) in 504 aa overlap (198-701:1-500)
170 180 190 200 210 220
mKIAA1 NGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCMLGAGLGTSDLEDVLPPA
:.::.: : ::::: .:::: : : : .
gi|109 MTWLMLLGALLCMLCVGLGTPDSEGFPPRT
10 20 30
230 240 250 260 270 280
mKIAA1 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
::::: ::::::.:::.: ::::.:. ::...:.::::::::.::.::::::: .::::
gi|109 PHNCPHKCICAADLLSCTGLGLQDVPAELPAATADLDLSHNALQRLRPGWLAPLFQLRAL
40 50 60 70 80 90
290 300 310 320 330 340
mKIAA1 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
:::.:.::.:: :.:.:::::: :::::: :: : :::::: ::::::::: :.:::
gi|109 HLGHNELEALGLGVFANASGLRLLDLSSNALRALGRHDLDGLGALEKLLLFNNRLVHLDE
100 110 120 130 140 150
350 360 370 380 390 400
mKIAA1 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
::.:: ::::::.::::.::::.:::::. :.: ::::::: : :::.:::::::..:
gi|109 HAFHGLSALSHLYLGCNELASFSFDHLHGLSATHLLTLDLSSNRLGHISVPELAALPAFL
160 170 180 190 200 210
410 420 430 440 450 460
mKIAA1 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVFKVSESRVRFFEHSRVF
:: :::::::::::: :::::.:::::::::..:: ::: ::.::: ::::::.:::::
gi|109 KNGLYLHNNPLPCDCRLYHLLQRWHQRGLSAVRDFAREYICLAFKVPASRVRFFQHSRVF
220 230 240 250 260 270
470 480 490 500 510 520
mKIAA1 KNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVSPKNELLVAPASQDGSIA
.::: : : ::: :::.:.: ::.::::.::::::: :.:::::..::: ::.:.:::::
gi|109 ENCSSAPALGLERPEEHLYALVGRSLRLYCNTSVPAMRIAWVSPQQELLRAPGSRDGSIA
280 290 300 310 320 330
530 540 550 560 570 580
mKIAA1 VLADGSLAIGRVQEQHAGVFVCLASGPRLHHNQTLEYNVSVQKARPEPETFNTGFTTLLG
:::::::::: :::::::.:::::.::::::::: ::::::. :::::.::::::::::
gi|109 VLADGSLAIGNVQEQHAGLFVCLATGPRLHHNQTHEYNVSVHFPRPEPEAFNTGFTTLLG
340 350 360 370 380 390
590 600 610 620 630 640
mKIAA1 CIVGLVLVLLYLFAPPCRGCCHCCQRACRNRCWPRASSPLQELSAQSSMLSTTPPDAPSR
: :::::::::::::: :: ::.:::: : :::. :::.:::::::.:::::::::::
gi|109 CAVGLVLVLLYLFAPP---CC-CCRRACRCRRWPRTPSPLHELSAQSSVLSTTPPDAPSR
400 410 420 430 440
650 660 670 680 690 700
mKIAA1 KASVHKHVVFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAGSESASSTGSEGLVMS
::::::::::::::..::::::::::::.:::::: :::::::::::: ::::
gi|109 KASVHKHVVFLEPGRRGLNGRVQLAVAEEFDLCNPGDLQLKAGSESASSIGSEGPMTT
450 460 470 480 490 500
>>gi|68052343|sp|Q86WK7.1|AMGO3_HUMAN RecName: Full=Amph (504 aa)
initn: 2161 init1: 2096 opt: 2609 Z-score: 2977.0 bits: 560.9 E(): 4.1e-157
Smith-Waterman score: 2609; 77.183% identity (88.492% similar) in 504 aa overlap (198-701:1-500)
170 180 190 200 210 220
mKIAA1 NGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCMLGAGLGTSDLEDVLPPA
:.:::: : ::::: .:::: : : : :
gi|680 MTWLVLLGTLLCMLRVGLGTPDSEGFPPRA
10 20 30
230 240 250 260 270 280
mKIAA1 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
:::: ::::::.:::.: ::::.:. ::...:.::::::::.::.::::::: .::::
gi|680 LHNCPYKCICAADLLSCTGLGLQDVPAELPAATADLDLSHNALQRLRPGWLAPLFQLRAL
40 50 60 70 80 90
290 300 310 320 330 340
mKIAA1 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
:: .:.:..::.:.:.:::::: :::::: :: : :::::: ::::::::: :.:::
gi|680 HLDHNELDALGRGVFVNASGLRLLDLSSNTLRALGRHDLDGLGALEKLLLFNNRLVHLDE
100 110 120 130 140 150
350 360 370 380 390 400
mKIAA1 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
::.::: ::::::.::::.::::.:::::. :.: ::::::: : :::.:::::::..:
gi|680 HAFHGLRALSHLYLGCNELASFSFDHLHGLSATHLLTLDLSSNRLGHISVPELAALPAFL
160 170 180 190 200 210
410 420 430 440 450 460
mKIAA1 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVFKVSESRVRFFEHSRVF
:: :::::::::::: :::::.:::::::::..:: :::.::.::: ::::::.:::::
gi|680 KNGLYLHNNPLPCDCRLYHLLQRWHQRGLSAVRDFAREYVCLAFKVPASRVRFFQHSRVF
220 230 240 250 260 270
470 480 490 500 510 520
mKIAA1 KNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVSPKNELLVAPASQDGSIA
.::: : : ::: :::.:.: ::.::::.::::::: :.:::::..::: ::.:.:::::
gi|680 ENCSSAPALGLERPEEHLYALVGRSLRLYCNTSVPAMRIAWVSPQQELLRAPGSRDGSIA
280 290 300 310 320 330
530 540 550 560 570 580
mKIAA1 VLADGSLAIGRVQEQHAGVFVCLASGPRLHHNQTLEYNVSVQKARPEPETFNTGFTTLLG
:::::::::: :::::::.:::::.::::::::: ::::::. :::::.::::::::::
gi|680 VLADGSLAIGNVQEQHAGLFVCLATGPRLHHNQTHEYNVSVHFPRPEPEAFNTGFTTLLG
340 350 360 370 380 390
590 600 610 620 630 640
mKIAA1 CIVGLVLVLLYLFAPPCRGCCHCCQRACRNRCWPRASSPLQELSAQSSMLSTTPPDAPSR
: :::::::::::::::: ::.:::: : ::.. :::::::::::.:::::::::::
gi|680 CAVGLVLVLLYLFAPPCR----CCRRACRCRRWPQTPSPLQELSAQSSVLSTTPPDAPSR
400 410 420 430 440
650 660 670 680 690 700
mKIAA1 KASVHKHVVFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAGSESASSTGSEGLVMS
::::::::::::::..::::::::::::.::: :: ::::::::::::: ::::
gi|680 KASVHKHVVFLEPGRRGLNGRVQLAVAEEFDLYNPGGLQLKAGSESASSIGSEGPMTT
450 460 470 480 490 500
>>gi|72533373|gb|AAI01366.1| Adhesion molecule with Ig-l (504 aa)
initn: 2161 init1: 2096 opt: 2599 Z-score: 2965.6 bits: 558.7 E(): 1.8e-156
Smith-Waterman score: 2599; 76.984% identity (88.294% similar) in 504 aa overlap (198-701:1-500)
170 180 190 200 210 220
mKIAA1 NGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCMLGAGLGTSDLEDVLPPA
:.:::: : ::::: .:::: : : : :
gi|725 MTWLVLLGTLLCMLRVGLGTPDSEGFPPRA
10 20 30
230 240 250 260 270 280
mKIAA1 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
:::: ::::::.:::.: ::::.:. ::...:.::::::::.::.::::::: .::::
gi|725 LHNCPYKCICAADLLSCTGLGLQDVPAELPAATADLDLSHNALQRLRPGWLAPLFQLRAL
40 50 60 70 80 90
290 300 310 320 330 340
mKIAA1 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
:: .:.:..::.:.:.:::::: :::::: :: : :::::: ::::::::: :.:::
gi|725 HLDHNELDALGRGVFVNASGLRLLDLSSNTLRALGRHDLDGLGALEKLLLFNNRLVHLDE
100 110 120 130 140 150
350 360 370 380 390 400
mKIAA1 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
::.::: ::::::.::::.::::.:::::. :.: ::::::: : :::.:::::::..:
gi|725 HAFHGLRALSHLYLGCNELASFSFDHLHGLSATHLLTLDLSSNRLGHISVPELAALPAFL
160 170 180 190 200 210
410 420 430 440 450 460
mKIAA1 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVFKVSESRVRFFEHSRVF
:: :::::::::::: :::::.:::::::::..:: :::.::.::: ::::::.:::::
gi|725 KNGLYLHNNPLPCDCRLYHLLQRWHQRGLSAVRDFAREYVCLAFKVPASRVRFFQHSRVF
220 230 240 250 260 270
470 480 490 500 510 520
mKIAA1 KNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTSVPATRVAWVSPKNELLVAPASQDGSIA
.::: : : ::: :::.:.: ::.::::.::::::: :.:::::..::: ::.:.:::::
gi|725 ENCSSAPALGLERPEEHLYALVGRSLRLYCNTSVPAMRIAWVSPQQELLRAPGSRDGSIA
280 290 300 310 320 330
530 540 550 560 570 580
mKIAA1 VLADGSLAIGRVQEQHAGVFVCLASGPRLHHNQTLEYNVSVQKARPEPETFNTGFTTLLG
:::::::::: :::::::.:::::.::::::::: ::::::. :::::.::::::::::
gi|725 VLADGSLAIGNVQEQHAGLFVCLATGPRLHHNQTHEYNVSVHFPRPEPEAFNTGFTTLLG
340 350 360 370 380 390
590 600 610 620 630 640
mKIAA1 CIVGLVLVLLYLFAPPCRGCCHCCQRACRNRCWPRASSPLQELSAQSSMLSTTPPDAPSR
: :::::::::::::::: ::. ::: : ::.. :::::::::::.:::::::::::
gi|725 CAVGLVLVLLYLFAPPCR----CCRGACRCRRWPQTPSPLQELSAQSSVLSTTPPDAPSR
400 410 420 430 440
650 660 670 680 690 700
mKIAA1 KASVHKHVVFLEPGKKGLNGRVQLAVAEDFDLCNPMGLQLKAGSESASSTGSEGLVMS
::::::::::::::..::::::::::::.::: :: ::::::::::::: ::::
gi|725 KASVHKHVVFLEPGRRGLNGRVQLAVAEEFDLYNPGGLQLKAGSESASSIGSEGPMTT
450 460 470 480 490 500
>>gi|26324562|dbj|BAC26035.1| unnamed protein product [M (243 aa)
initn: 1595 init1: 1511 opt: 1511 Z-score: 1727.6 bits: 328.6 E(): 1.6e-87
Smith-Waterman score: 1511; 99.554% identity (100.000% similar) in 224 aa overlap (198-421:1-224)
170 180 190 200 210 220
mKIAA1 NGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCMLGAGLGTSDLEDVLPPA
::::::::::::::::::::::::::::::
gi|263 MAWLVLSGILLCMLGAGLGTSDLEDVLPPA
10 20 30
230 240 250 260 270 280
mKIAA1 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 PHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLSRLRAL
40 50 60 70 80 90
290 300 310 320 330 340
mKIAA1 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 HLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMHLDL
100 110 120 130 140 150
350 360 370 380 390 400
mKIAA1 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 DAFQGLRMLSHLYLSCNELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELAALPTYL
160 170 180 190 200 210
410 420 430 440 450 460
mKIAA1 KNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVFKVSESRVRFFEHSRVF
:::::::::::::.
gi|263 KNRLYLHNNPLPCELQPLPPAPALAPAGPECPA
220 230 240
>>gi|81875204|sp|Q8BTZ7.1|GMPPB_MOUSE RecName: Full=Mann (360 aa)
initn: 1300 init1: 1300 opt: 1300 Z-score: 1484.6 bits: 284.2 E(): 5.5e-74
Smith-Waterman score: 1300; 100.000% identity (100.000% similar) in 189 aa overlap (1-189:172-360)
10 20 30
mKIAA1 NAGMYILSPAVLQRIQLKPTSIEKEIFPVM
::::::::::::::::::::::::::::::
gi|818 SKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLKPTSIEKEIFPVM
150 160 170 180 190 200
40 50 60 70 80 90
mKIAA1 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSAR
210 220 230 240 250 260
100 110 120 130 140 150
mKIAA1 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME
270 280 290 300 310 320
160 170 180 190 200 210
mKIAA1 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCM
:::::::::::::::::::::::::::::::::::::::
gi|818 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM
330 340 350 360
220 230 240 250 260 270
mKIAA1 LGAGLGTSDLEDVLPPAPHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNAL
>>gi|149018555|gb|EDL77196.1| GDP-mannose pyrophosphoryl (360 aa)
initn: 1299 init1: 1299 opt: 1299 Z-score: 1483.4 bits: 284.0 E(): 6.4e-74
Smith-Waterman score: 1299; 99.471% identity (100.000% similar) in 189 aa overlap (1-189:172-360)
10 20 30
mKIAA1 NAGMYILSPAVLQRIQLKPTSIEKEIFPVM
::::::::::::::::::::::::::::::
gi|149 SKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLKPTSIEKEIFPVM
150 160 170 180 190 200
40 50 60 70 80 90
mKIAA1 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSAR
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
gi|149 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGVVGNVLVDPSAR
210 220 230 240 250 260
100 110 120 130 140 150
mKIAA1 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME
270 280 290 300 310 320
160 170 180 190 200 210
mKIAA1 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCM
:::::::::::::::::::::::::::::::::::::::
gi|149 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM
330 340 350 360
220 230 240 250 260 270
mKIAA1 LGAGLGTSDLEDVLPPAPHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNAL
>>gi|109039623|ref|XP_001106890.1| PREDICTED: similar to (360 aa)
initn: 1278 init1: 1278 opt: 1278 Z-score: 1459.4 bits: 279.6 E(): 1.4e-72
Smith-Waterman score: 1278; 97.354% identity (100.000% similar) in 189 aa overlap (1-189:172-360)
10 20 30
mKIAA1 NAGMYILSPAVLQRIQLKPTSIEKEIFPVM
::::::::::::.::::.:::::::.::.:
gi|109 SKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLRRIQLQPTSIEKEVFPIM
150 160 170 180 190 200
40 50 60 70 80 90
mKIAA1 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 AKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSAR
210 220 230 240 250 260
100 110 120 130 140 150
mKIAA1 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|109 IGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRME
270 280 290 300 310 320
160 170 180 190 200 210
mKIAA1 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIMISSLVVTGMAWLVLSGILLCM
:::::::::::::::::::::::::::::::::::::::
gi|109 NVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM
330 340 350 360
220 230 240 250 260 270
mKIAA1 LGAGLGTSDLEDVLPPAPHNCPDICICAADVLSCAGRGLQDLPVALPTTAAELDLSHNAL
705 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Mon Mar 16 03:31:10 2009 done: Mon Mar 16 03:39:16 2009
Total Scan time: 1069.550 Total Display time: 0.150
Function used was FASTA [version 34.26.5 April 26, 2007]