# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpg00620.fasta.nr -Q ../query/mKIAA1016.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1016, 777 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7904026 sequences Expectation_n fit: rho(ln(x))= 6.0885+/-0.000203; mu= 9.7391+/- 0.011 mean_var=117.6641+/-22.743, 0's: 37 Z-trim: 98 B-trim: 567 in 1/64 Lambda= 0.118237 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|49036032|sp|P62046.1|LRCH1_MOUSE RecName: Full= ( 709) 4710 814.9 0 gi|90991704|ref|NP_001028611.2| leucine-rich repea ( 709) 4704 813.8 0 gi|74180769|dbj|BAE25596.1| unnamed protein produc ( 754) 4064 704.7 3.4e-200 gi|148703891|gb|EDL35838.1| mCG121291, isoform CRA ( 796) 4035 699.8 1.1e-198 gi|183985874|gb|AAI66585.1| Lrch1 protein [Rattus ( 677) 3194 556.2 1.5e-155 gi|148703892|gb|EDL35839.1| mCG121291, isoform CRA ( 481) 3166 551.3 3.2e-154 gi|149049959|gb|EDM02283.1| similar to Leucine-ric ( 675) 3165 551.3 4.6e-154 gi|55731334|emb|CAH92381.1| hypothetical protein [ ( 729) 2941 513.1 1.5e-142 gi|33126227|gb|AAK95567.1| neuronal protein isofor ( 696) 2909 507.6 6.6e-141 gi|49066056|sp|Q9Y2L9.2|LRCH1_HUMAN RecName: Full= ( 728) 2909 507.7 6.8e-141 gi|109659120|gb|AAI17473.1| LRCH1 protein [Homo sa ( 763) 2904 506.8 1.3e-140 gi|158259257|dbj|BAF85587.1| unnamed protein produ ( 696) 2895 505.2 3.4e-140 gi|219521527|gb|AAI43884.1| Unknown (protein for M ( 763) 2892 504.8 5.3e-140 gi|194221898|ref|XP_001915067.1| PREDICTED: leucin ( 728) 2868 500.7 8.7e-139 gi|74193656|dbj|BAE22780.1| unnamed protein produc ( 579) 2865 500.1 1e-138 gi|194671967|ref|XP_581598.4| PREDICTED: similar t ( 834) 2722 475.8 3e-131 gi|126327703|ref|XP_001379008.1| PREDICTED: simila ( 734) 2658 464.8 5.3e-128 gi|73989286|ref|XP_534123.2| PREDICTED: similar to ( 767) 2480 434.5 7.6e-119 gi|149635922|ref|XP_001514226.1| PREDICTED: simila ( 691) 2454 430.0 1.5e-117 gi|118084878|ref|XP_417050.2| PREDICTED: similar t ( 705) 2318 406.8 1.5e-110 gi|55661728|emb|CAH73642.1| leucine-rich repeats a ( 734) 2224 390.8 1e-105 gi|74144471|dbj|BAE36081.1| unnamed protein produc ( 438) 1942 342.5 2.1e-91 gi|119629171|gb|EAX08766.1| leucine-rich repeats a ( 521) 1729 306.2 2.1e-80 gi|189523516|ref|XP_689376.3| PREDICTED: wu:fb80e0 ( 655) 1392 248.8 5e-63 gi|62740127|gb|AAH94210.1| MGC115205 protein [Xeno ( 601) 1323 237.0 1.6e-59 gi|47217123|emb|CAG02624.1| unnamed protein produc ( 643) 1292 231.8 6.7e-58 gi|118095156|ref|XP_422732.2| PREDICTED: similar t ( 784) 1216 218.9 6.2e-54 gi|114591388|ref|XP_001166942.1| PREDICTED: leucin ( 597) 1207 217.2 1.5e-53 gi|13960126|gb|AAH07504.1| Leucine-rich repeats an ( 712) 1207 217.3 1.7e-53 gi|114591386|ref|XP_516983.2| PREDICTED: leucine-r ( 712) 1207 217.3 1.7e-53 gi|194382758|dbj|BAG64549.1| unnamed protein produ ( 725) 1207 217.3 1.7e-53 gi|114591374|ref|XP_001167057.1| PREDICTED: leucin ( 743) 1207 217.3 1.7e-53 gi|114591384|ref|XP_001167002.1| PREDICTED: leucin ( 747) 1207 217.3 1.7e-53 gi|114591376|ref|XP_001166845.1| PREDICTED: leucin ( 750) 1207 217.3 1.7e-53 gi|114591378|ref|XP_001166969.1| PREDICTED: leucin ( 757) 1207 217.3 1.7e-53 gi|119612649|gb|EAW92243.1| leucine-rich repeats a ( 767) 1207 217.3 1.8e-53 gi|114591382|ref|XP_001167119.1| PREDICTED: leucin ( 767) 1207 217.3 1.8e-53 gi|116248531|sp|Q96II8.2|LRCH3_HUMAN RecName: Full ( 777) 1207 217.4 1.8e-53 gi|114591370|ref|XP_001167088.1| PREDICTED: leucin ( 777) 1207 217.4 1.8e-53 gi|114591380|ref|XP_001167143.1| PREDICTED: leucin ( 779) 1207 217.4 1.8e-53 gi|119612650|gb|EAW92244.1| leucine-rich repeats a ( 803) 1207 217.4 1.8e-53 gi|114591372|ref|XP_001167178.1| PREDICTED: leucin ( 803) 1207 217.4 1.8e-53 gi|149731259|ref|XP_001501537.1| PREDICTED: simila ( 774) 1205 217.0 2.2e-53 gi|149060670|gb|EDM11384.1| leucine-rich repeats a ( 526) 1198 215.7 3.9e-53 gi|224060621|ref|XP_002190674.1| PREDICTED: simila ( 718) 1199 216.0 4.3e-53 gi|149060669|gb|EDM11383.1| leucine-rich repeats a ( 719) 1198 215.8 4.9e-53 gi|149060668|gb|EDM11382.1| leucine-rich repeats a ( 769) 1198 215.8 5.1e-53 gi|126325785|ref|XP_001364043.1| PREDICTED: simila ( 768) 1197 215.6 5.8e-53 gi|194374545|dbj|BAG57168.1| unnamed protein produ ( 803) 1195 215.3 7.5e-53 gi|148665406|gb|EDK97822.1| mCG130130, isoform CRA ( 530) 1189 214.1 1.1e-52 >>gi|49036032|sp|P62046.1|LRCH1_MOUSE RecName: Full=Leuc (709 aa) initn: 4710 init1: 4710 opt: 4710 Z-score: 4346.3 bits: 814.9 E(): 0 Smith-Waterman score: 4710; 100.000% identity (100.000% similar) in 709 aa overlap (69-777:1-709) 40 50 60 70 80 90 mKIAA1 RLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQH :::::::::::::::::::::::::::::: gi|490 MATPGSEPQAFAPALSVTALHPHLHQHHQH 10 20 30 100 110 120 130 140 150 mKIAA1 HQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 HQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 RADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 RADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 VHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 VHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPS 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 DEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEFQPKPSVLGDSGISGQEREQLAGRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 DEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEFQPKPSVLGDSGISGQEREQLAGRA 340 350 360 370 380 390 460 470 480 490 500 510 mKIAA1 DARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAELLQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 DARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAELLQD 400 410 420 430 440 450 520 530 540 550 560 570 mKIAA1 PNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 PNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQYS 460 470 480 490 500 510 580 590 600 610 620 630 mKIAA1 PNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 PNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRPQ 520 530 540 550 560 570 640 650 660 670 680 690 mKIAA1 RNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 RNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLAN 580 590 600 610 620 630 700 710 720 730 740 750 mKIAA1 HVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 HVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVK 640 650 660 670 680 690 760 770 mKIAA1 VGTTVQALLDVTVTKALFT ::::::::::::::::::: gi|490 VGTTVQALLDVTVTKALFT 700 >>gi|90991704|ref|NP_001028611.2| leucine-rich repeats a (709 aa) initn: 4704 init1: 4704 opt: 4704 Z-score: 4340.7 bits: 813.8 E(): 0 Smith-Waterman score: 4704; 99.718% identity (100.000% similar) in 709 aa overlap (69-777:1-709) 40 50 60 70 80 90 mKIAA1 RLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQH :::::::::::::::::::::::::::::: gi|909 MATPGSEPQAFAPALSVTALHPHLHQHHQH 10 20 30 100 110 120 130 140 150 mKIAA1 HQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 HQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 RADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 RADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 VHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 VHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPS 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 DEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEFQPKPSVLGDSGISGQEREQLAGRA :::::::::::::::::::::::::::::::.:::::::::.:::::::::::::::::: gi|909 DEDTVSLNAPMSNIVEEDQTIKEDACHRLTPTKGEFQPKPSILGDSGISGQEREQLAGRA 340 350 360 370 380 390 460 470 480 490 500 510 mKIAA1 DARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAELLQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 DARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAELLQD 400 410 420 430 440 450 520 530 540 550 560 570 mKIAA1 PNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 PNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQYS 460 470 480 490 500 510 580 590 600 610 620 630 mKIAA1 PNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 PNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRPQ 520 530 540 550 560 570 640 650 660 670 680 690 mKIAA1 RNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 RNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLAN 580 590 600 610 620 630 700 710 720 730 740 750 mKIAA1 HVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|909 HVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVK 640 650 660 670 680 690 760 770 mKIAA1 VGTTVQALLDVTVTKALFT ::::::::::::::::::: gi|909 VGTTVQALLDVTVTKALFT 700 >>gi|74180769|dbj|BAE25596.1| unnamed protein product [M (754 aa) initn: 4064 init1: 4064 opt: 4064 Z-score: 3750.4 bits: 704.7 E(): 3.4e-200 Smith-Waterman score: 4934; 96.268% identity (96.525% similar) in 777 aa overlap (1-777:5-754) 10 20 30 40 50 mKIAA1 PPLPSLPPPQPLAPPAGNLGDRTAASTSAPLAAPPAVPRLSRERCGDSGPPGKPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DSGAPPLPSLPPPQPLAPPAGNLGDRTAASTSAPLAAPPAVPRLSRERCGDSGPPGKPVT 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 PRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQHHQHHQHHGGTGGTGFNLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQHHQHHQHHGGTGGTGFNLP 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTVRADLSKNRLVEVPMELCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTVRADLSKNRLVEVPMELCQ 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 FVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPACLCGLPLKVLIASNNKLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPACLCGLPLKVLIASNNKLG 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 SLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNYLKVLPPELVDLPLVKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNYLKVLPPELVDLPLVKF 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 DFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTSD 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 SLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNAPMSNIVEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNAPMSNIVEED 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA1 QTIKEDACHRLTPAKGEFQPKPSVLGDSGISGQEREQLAGRADARHSGLMNYIKDQAEDC :::::::::::::.:::::::::.:::::::::::::::::::::::::::::::::::: gi|741 QTIKEDACHRLTPTKGEFQPKPSILGDSGISGQEREQLAGRADARHSGLMNYIKDQAEDC 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA1 EELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAELLQDPNGLSADIIERSILNLFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAELLQDPNGLSADIIERSILNLFP 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA1 MDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQYSPNEIRENSPSVSPTANIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQYSPNEIRENSPSVSPTANIT 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA1 APFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRPQRNLESIDPQFTIRRKMEQ ::::::::: :::::::::::::::::::::::: gi|741 APFGLKPRS---------------------------VFLRPQRNLESIDPQFTIRRKMEQ 610 620 630 660 670 680 690 700 710 mKIAA1 MREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLANHVRPRSVASIHVPSPAVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLANHVRPRSVASIHVPSPAVP 640 650 660 670 680 690 720 730 740 750 760 770 mKIAA1 KLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVGTTVQALLDVTVTKALF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVGTTVQALLDVTVTKALF 700 710 720 730 740 750 mKIAA1 T : gi|741 T >>gi|148703891|gb|EDL35838.1| mCG121291, isoform CRA_a [ (796 aa) initn: 4102 init1: 3166 opt: 4035 Z-score: 3723.3 bits: 699.8 E(): 1.1e-198 Smith-Waterman score: 4905; 96.010% identity (96.268% similar) in 777 aa overlap (1-777:49-796) 10 20 30 mKIAA1 PPLPSLPPPQPLAPPAGNLGDRTAASTSAP :::::::::::::::::::::::::::::: gi|148 QFQPASGVERQQAAEEERRAGARARADTGAPPLPSLPPPQPLAPPAGNLGDRTAASTSAP 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA1 LAAPPAVPRLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LAAPPAVPRLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHP 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA1 HLHQHHQHHQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HLHQHHQHHQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAP 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA1 GHDLSDTVRADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GHDLSDTVRADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSR 200 210 220 230 240 250 220 230 240 250 260 270 mKIAA1 NQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKS 260 270 280 290 300 310 280 290 300 310 320 330 mKIAA1 LRELNVRRNYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRELNVRRNYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPP 320 330 340 350 360 370 340 350 360 370 380 390 mKIAA1 AQICTKGKVHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AQICTKGKVHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDK 380 390 400 410 420 430 400 410 420 430 440 450 mKIAA1 RLSATEPSDEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEFQPKPSVLGDSGISGQE :::::::::::::::::::::::::::::::::::::::.:::::::::.:::::::::: gi|148 RLSATEPSDEDTVSLNAPMSNIVEEDQTIKEDACHRLTPTKGEFQPKPSILGDSGISGQE 440 450 460 470 480 490 460 470 480 490 500 510 mKIAA1 REQLAGRADARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQL :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|148 REQLAGRADARHSGLMNYIK--AEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQL 500 510 520 530 540 550 520 530 540 550 560 570 mKIAA1 REAELLQDPNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 REAELLQDPNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLML 560 570 580 590 600 610 580 590 600 610 620 630 mKIAA1 QSNGSQYSPNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLS ::::::::::::::::::::::::::::::::::: gi|148 QSNGSQYSPNEIRENSPSVSPTANITAPFGLKPRS------------------------- 620 630 640 650 640 650 660 670 680 690 mKIAA1 RHVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 --VFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDG 660 670 680 690 700 700 710 720 730 740 750 mKIAA1 VVLCHLANHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VVLCHLANHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHI 710 720 730 740 750 760 760 770 mKIAA1 LEEKGLVKVGTTVQALLDVTVTKALFT ::::::::::::::::::::::::::: gi|148 LEEKGLVKVGTTVQALLDVTVTKALFT 770 780 790 >>gi|183985874|gb|AAI66585.1| Lrch1 protein [Rattus norv (677 aa) initn: 3509 init1: 2579 opt: 3194 Z-score: 2948.9 bits: 556.2 E(): 1.5e-155 Smith-Waterman score: 4058; 88.592% identity (92.535% similar) in 710 aa overlap (69-777:1-677) 40 50 60 70 80 90 mKIAA1 RLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQH :::::::::::::::::::::::.::: gi|183 MATPGSEPQAFAPALSVTALHPHIHQH--- 10 20 100 110 120 130 140 150 mKIAA1 HQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV :::::.::..::::::::::::::::::::::::::::::::::::.:::::::::: gi|183 ---HQHHGSTGSAGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 30 40 50 60 70 80 160 170 180 190 200 210 mKIAA1 RADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA .::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|183 QADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA 90 100 110 120 130 140 220 230 240 250 260 270 mKIAA1 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR 150 160 170 180 190 200 280 290 300 310 320 330 mKIAA1 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK 210 220 230 240 250 260 340 350 360 370 380 390 mKIAA1 VHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPS ::::::::::::::::.::::: .::::: :::::::::::::::::::::::::::::: gi|183 VHIFKYLSIQACQIKTADSLYLHSIERPHSHQHVEDSKKDSDSGVGSDNGDKRLSATEPS 270 280 290 300 310 320 400 410 420 430 440 450 mKIAA1 DEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEFQPKPSVLGDSGISGQEREQLAGRA ::::::::.:::::.::::: ::::::::.::.:.::: ::.::::: :::::::.:::: gi|183 DEDTVSLNVPMSNIAEEDQTTKEDACHRLAPAEGDFQPTPSLLGDSGSSGQEREQFAGRA 330 340 350 360 370 380 460 470 480 490 500 510 mKIAA1 DARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAE-LLQ :. : ::::::::::::::::::::::::. :::::::::..:::.::::::::: ::: gi|183 DVLHCELMNYIKDQAEDCEELLRIEEDAHWQTEELLNSSKDQDLDIVMIEQLREAEDLLQ 390 400 410 420 430 440 520 530 540 550 560 570 mKIAA1 DPNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQY ::::..:: :::::::.:: :.:: :::: ::::::::: ::.::::::. ::::::: gi|183 GPNGLTTDITERSILNLYPMCSAEALEFPDSSLNGQLQLERSPEREVQNDVTLQSNGSQC 450 460 470 480 490 500 580 590 600 610 620 630 mKIAA1 SPNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRP :::::::.::: :::::::::::::::: ::::: gi|183 SPNEIREDSPSGSPTANITAPFGLKPRS---------------------------VFLRP 510 520 530 640 650 660 670 680 690 mKIAA1 QRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 QRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLA 540 550 560 570 580 590 700 710 720 730 740 750 mKIAA1 NHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 NHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLV 600 610 620 630 640 650 760 770 mKIAA1 KVGTTVQALLDVTVTKALFT ::: :::::::::::::::: gi|183 KVGMTVQALLDVTVTKALFT 660 670 >>gi|148703892|gb|EDL35839.1| mCG121291, isoform CRA_b [ (481 aa) initn: 3166 init1: 3166 opt: 3166 Z-score: 2925.1 bits: 551.3 E(): 3.2e-154 Smith-Waterman score: 3166; 99.574% identity (100.000% similar) in 470 aa overlap (1-470:1-470) 10 20 30 40 50 60 mKIAA1 PPLPSLPPPQPLAPPAGNLGDRTAASTSAPLAAPPAVPRLSRERCGDSGPPGKPVTPRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PPLPSLPPPQPLAPPAGNLGDRTAASTSAPLAAPPAVPRLSRERCGDSGPPGKPVTPRRS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 GGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQHHQHHQHHGGTGGTGFNLPLNRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQHHQHHQHHGGTGGTGFNLPLNRG 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 LERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTVRADLSKNRLVEVPMELCQFVSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTVRADLSKNRLVEVPMELCQFVSL 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA1 EILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPACLCGLPLKVLIASNNKLGSLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPACLCGLPLKVLIASNNKLGSLPE 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA1 EIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNYLKVLPPELVDLPLVKFDFSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNYLKVLPPELVDLPLVKFDFSC 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA1 NKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTSDSLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTSDSLYL 310 320 330 340 350 360 370 380 390 400 410 420 mKIAA1 PTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNAPMSNIVEEDQTIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNAPMSNIVEEDQTIK 370 380 390 400 410 420 430 440 450 460 470 480 mKIAA1 EDACHRLTPAKGEFQPKPSVLGDSGISGQEREQLAGRADARHSGLMNYIKDQAEDCEELL :::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|148 EDACHRLTPTKGEFQPKPSILGDSGISGQEREQLAGRADARHSGLMNYIKARQKTVKSYC 430 440 450 460 470 480 490 500 510 520 530 540 mKIAA1 RIEEDAHWHMEELLNSSKDRELDIAMIEQLREAELLQDPNGLSADIIERSILNLFPMDSG gi|148 G >>gi|149049959|gb|EDM02283.1| similar to Leucine-rich re (675 aa) initn: 3249 init1: 2319 opt: 3165 Z-score: 2922.2 bits: 551.3 E(): 4.6e-154 Smith-Waterman score: 4029; 88.310% identity (92.254% similar) in 710 aa overlap (69-777:1-675) 40 50 60 70 80 90 mKIAA1 RLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQH :::::::::::::::::::::::.::: gi|149 MATPGSEPQAFAPALSVTALHPHIHQH--- 10 20 100 110 120 130 140 150 mKIAA1 HQHHQHHGGTGGTGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTV :::::.::..::::::::::::::::::::::::::::::::::::.:::::::::: gi|149 ---HQHHGSTGSAGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 30 40 50 60 70 80 160 170 180 190 200 210 mKIAA1 RADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA .::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|149 QADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPA 90 100 110 120 130 140 220 230 240 250 260 270 mKIAA1 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRR 150 160 170 180 190 200 280 290 300 310 320 330 mKIAA1 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGK 210 220 230 240 250 260 340 350 360 370 380 390 mKIAA1 VHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPS ::::::::::::::::.::::: .::::: :::::::::::::::::::::::::::::: gi|149 VHIFKYLSIQACQIKTADSLYLHSIERPHSHQHVEDSKKDSDSGVGSDNGDKRLSATEPS 270 280 290 300 310 320 400 410 420 430 440 450 mKIAA1 DEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEFQPKPSVLGDSGISGQEREQLAGRA ::::::::.:::::.::::: ::::::::.::.:.::: ::.::::: :::::::.:::: gi|149 DEDTVSLNVPMSNIAEEDQTTKEDACHRLAPAEGDFQPTPSLLGDSGSSGQEREQFAGRA 330 340 350 360 370 380 460 470 480 490 500 510 mKIAA1 DARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREAE-LLQ :. : :::::: ::::::::::::::::. :::::::::..:::.::::::::: ::: gi|149 DVLHCELMNYIK--AEDCEELLRIEEDAHWQTEELLNSSKDQDLDIVMIEQLREAEDLLQ 390 400 410 420 430 440 520 530 540 550 560 570 mKIAA1 DPNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQY ::::..:: :::::::.:: :.:: :::: ::::::::: ::.::::::. ::::::: gi|149 GPNGLTTDITERSILNLYPMCSAEALEFPDSSLNGQLQLERSPEREVQNDVTLQSNGSQC 450 460 470 480 490 500 580 590 600 610 620 630 mKIAA1 SPNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRP :::::::.::: :::::::::::::::: ::::: gi|149 SPNEIREDSPSGSPTANITAPFGLKPRS---------------------------VFLRP 510 520 530 640 650 660 670 680 690 mKIAA1 QRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLA 540 550 560 570 580 590 700 710 720 730 740 750 mKIAA1 NHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLV 600 610 620 630 640 650 760 770 mKIAA1 KVGTTVQALLDVTVTKALFT ::: :::::::::::::::: gi|149 KVGMTVQALLDVTVTKALFT 660 670 >>gi|55731334|emb|CAH92381.1| hypothetical protein [Pong (729 aa) initn: 3340 init1: 2040 opt: 2941 Z-score: 2715.3 bits: 513.1 E(): 1.5e-142 Smith-Waterman score: 3904; 80.789% identity (88.684% similar) in 760 aa overlap (35-777:7-729) 10 20 30 40 50 60 mKIAA1 SLPPPQPLAPPAGNLGDRTAASTSAPLAAPPAVPRLSR-ERCGDSGPPGKPVTPRRSGGA : .: : ::: ::. . :.::: gi|557 EHCGTQPELPFSPRGERCD---PPAGAAG--RGGGA 10 20 30 70 80 90 100 110 mKIAA1 GDREKMATPGSEPQAFAPALSVTALHPHLHQHHQHHQHHQHHGGTG----------GTG- :::::::::::: :. ::::..::: :: : .::.::::::::: :.: gi|557 --REKMATPGSEPQPFVQALSVATLHP-LH-HPHHHHHHQHHGGTGAPGGAGGGGGGSGS 40 50 60 70 80 120 130 140 150 160 170 mKIAA1 FNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTTAPGHDLSDTVRADLSKNRLVEVPM :::::::::::::::::::::::::::.:::::::.::::::::::.::::::::::::: gi|557 FNLPLNRGLERALEEAANSGGLNLSARRLKEFPRTAAPGHDLSDTVQADLSKNRLVEVPM 90 100 110 120 130 140 180 190 200 210 220 230 mKIAA1 ELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLNLSRNQLSALPACLCGLPLKVLIASN :::.::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|557 ELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTYLNLSRNQLSALPACLCGLPLKVLIASN 150 160 170 180 190 200 240 250 260 270 280 290 mKIAA1 NKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNYLKVLPPELVDLP ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|557 NKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNYLKVLPQELVDLP 210 220 230 240 250 260 300 310 320 330 340 350 mKIAA1 LVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQI :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|557 LVKFDFSCNKVLVIPICFREMKQLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQI 270 280 290 300 310 320 360 370 380 390 400 410 mKIAA1 KTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNAPMSNI ::.::::: :.:::::::::::.:::::::::::::::::::::::::::::::.::::: gi|557 KTADSLYLHTMERPHLHQHVEDGKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNVPMSNI 330 340 350 360 370 380 420 430 440 450 460 mKIAA1 VEEDQTIKEDACHRLTPAKGEF----QPKPSVLGDSGISGQEREQLAGRADARHSGLMNY .::.: ::::.::::.:.:::: ::.::.:::: ::.::.:.. :::. :: .::: gi|557 MEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNY 390 400 410 420 430 440 470 480 490 500 510 520 mKIAA1 IKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELDIAMIEQLREA-ELLQDPNGLSADII : .:::::::::::::.::. : ...::::...::::::::::: .:::::::::.:: gi|557 -KARAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTDIT 450 460 470 480 490 500 530 540 550 560 570 580 mKIAA1 ERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDREVQNDLMLQSNGSQYSPNEIRENSP :::.:::.:. :.:: :. : .::::.:::::: :::.:: :::::::::::::::::: gi|557 ERSVLNLYPIGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRENSP 510 520 530 540 550 560 590 600 610 620 630 640 mKIAA1 SVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESSPRRPQLLSRHVFLRPQRNLESIDPQ .::::.: :::::::::: ::::::::::::::: gi|557 AVSPTTNSTAPFGLKPRS---------------------------VFLRPQRNLESIDPQ 570 580 590 650 660 670 680 690 700 mKIAA1 FTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLANHVRPRSVAS ::::::::::::::::::::::::::::::.::::::::::::::::::.::.::::::: gi|557 FTIRRKMEQMREEKELVEQLRESIEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVAS 600 610 620 630 640 650 710 720 730 740 750 760 mKIAA1 IHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVGTTVQALL ::::::::::::::::::::::::::::::::::::::::::::::::::::: :.:::: gi|557 IHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVGITIQALL 660 670 680 690 700 710 770 mKIAA1 DVTVTKALFT :.:.:::::: gi|557 DITITKALFT 720 >>gi|33126227|gb|AAK95567.1| neuronal protein isoform a (696 aa) initn: 3360 init1: 2051 opt: 2909 Z-score: 2686.1 bits: 507.6 E(): 6.6e-141 Smith-Waterman score: 3886; 83.172% identity (90.621% similar) in 725 aa overlap (69-777:1-696) 40 50 60 70 80 90 mKIAA1 RLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQH ::::::::: :.:::::..::: ::. :.: gi|331 MATPGSEPQPFVPALSVATLHP-LHHPHHH 10 20 100 110 120 130 140 mKIAA1 HQHHQHHGGTG----------GTG-FNLPLNRGLERALEEAANSGGLNLSARKLKEFPRT :.::::::::: :.: ::::::::::::::::::::::::::::::::::: gi|331 HHHHQHHGGTGAPGGAGGGGGGSGGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRT 30 40 50 60 70 80 150 160 170 180 190 200 mKIAA1 TAPGHDLSDTVRADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLN .::::::::::.::::::::::::::::.::::::::::::::::::::::::::::.:: gi|331 AAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTYLN 90 100 110 120 130 140 210 220 230 240 250 260 mKIAA1 LSRNQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|331 LSRNQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQ 150 160 170 180 190 200 270 280 290 300 310 320 mKIAA1 LKSLRELNVRRNYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQ :::::::::::::::::: :::::::::::::::::::::.::::::::::::::::::: gi|331 LKSLRELNVRRNYLKVLPQELVDLPLVKFDFSCNKVLVIPICFREMKQLQVLLLENNPLQ 210 220 230 240 250 260 330 340 350 360 370 380 mKIAA1 SPPAQICTKGKVHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDN :::::::::::::::::::::::::::.::::: :.:::::::::::.:::::::::::: gi|331 SPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQHVEDGKKDSDSGVGSDN 270 280 290 300 310 320 390 400 410 420 430 440 mKIAA1 GDKRLSATEPSDEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEF----QPKPSVLGD :::::::::::::::::::.:::::.::.: ::::.::::.:.:::: ::.::.::: gi|331 GDKRLSATEPSDEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGD 330 340 350 360 370 380 450 460 470 480 490 500 mKIAA1 SGISGQEREQLAGRADARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELD : ::.::.:.. :::. :: .::: : .:::::::::::::.::. : ...::::...: gi|331 STNSGEERDQFTDRADGLHSEFMNY-KARAEDCEELLRIEEDVHWQTEGIISSSKDQDMD 390 400 410 420 430 440 510 520 530 540 550 560 mKIAA1 IAMIEQLREA-ELLQDPNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDR :::::::::: .:::::::::.:: :::.:::.:: :.:: :. : .::::.:::::: gi|331 IAMIEQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVC 450 460 470 480 490 500 570 580 590 600 610 620 mKIAA1 EVQNDLMLQSNGSQYSPNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESS :::.:: ::::::::::::::::::.::::.: :::::::::: gi|331 EVQSDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRS----------------- 510 520 530 540 550 630 640 650 660 670 680 mKIAA1 PRRPQLLSRHVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHED :::::::::::::::::::::::::::::::::::::::::::::.:::: gi|331 ----------VFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVSLHED 560 570 580 590 600 690 700 710 720 730 740 mKIAA1 LGAALMDGVVLCHLANHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEE ::::::::::::::.::.:::::::::::::::::::::::::::::::::::::::::: gi|331 LGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEE 610 620 630 640 650 660 750 760 770 mKIAA1 KLCLPHHILEEKGLVKVGTTVQALLDVTVTKALFT :::::::::::::::::: :.:::::.:::::::: gi|331 KLCLPHHILEEKGLVKVGITIQALLDITVTKALFT 670 680 690 >>gi|49066056|sp|Q9Y2L9.2|LRCH1_HUMAN RecName: Full=Leuc (728 aa) initn: 3168 init1: 2051 opt: 2909 Z-score: 2685.8 bits: 507.7 E(): 6.8e-141 Smith-Waterman score: 3703; 80.979% identity (89.091% similar) in 715 aa overlap (69-767:1-685) 40 50 60 70 80 90 mKIAA1 RLSRERCGDSGPPGKPVTPRRSGGAGDREKMATPGSEPQAFAPALSVTALHPHLHQHHQH ::::::::: :.:::::..::: ::. :.: gi|490 MATPGSEPQPFVPALSVATLHP-LHHPHHH 10 20 100 110 120 130 140 mKIAA1 HQHHQHHGGTG----------GTG-FNLPLNRGLERALEEAANSGGLNLSARKLKEFPRT :.::::::::: :.: ::::::::::::::::::::::::::::::::::: gi|490 HHHHQHHGGTGAPGGAGGGGGGSGGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRT 30 40 50 60 70 80 150 160 170 180 190 200 mKIAA1 TAPGHDLSDTVRADLSKNRLVEVPMELCQFVSLEILNLYHNCIRVIPEAIVNLQMLTHLN .::::::::::.::::::::::::::::.::::::::::::::::::::::::::::.:: gi|490 AAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTYLN 90 100 110 120 130 140 210 220 230 240 250 260 mKIAA1 LSRNQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 LSRNQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQ 150 160 170 180 190 200 270 280 290 300 310 320 mKIAA1 LKSLRELNVRRNYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMKQLQVLLLENNPLQ :::::::::::::::::: :::::::::::::::::::::.::::::::::::::::::: gi|490 LKSLRELNVRRNYLKVLPQELVDLPLVKFDFSCNKVLVIPICFREMKQLQVLLLENNPLQ 210 220 230 240 250 260 330 340 350 360 370 380 mKIAA1 SPPAQICTKGKVHIFKYLSIQACQIKTSDSLYLPTIERPHLHQHVEDSKKDSDSGVGSDN :::::::::::::::::::::::::::.::::: :.:::::::::::.:::::::::::: gi|490 SPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQHVEDGKKDSDSGVGSDN 270 280 290 300 310 320 390 400 410 420 430 440 mKIAA1 GDKRLSATEPSDEDTVSLNAPMSNIVEEDQTIKEDACHRLTPAKGEF----QPKPSVLGD :::::::::::::::::::.:::::.::.: ::::.::::.:.:::: ::.::.::: gi|490 GDKRLSATEPSDEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGD 330 340 350 360 370 380 450 460 470 480 490 500 mKIAA1 SGISGQEREQLAGRADARHSGLMNYIKDQAEDCEELLRIEEDAHWHMEELLNSSKDRELD : ::.::.:.. :::. :: .::: : .:::::::::::::.::. : ...::::...: gi|490 STNSGEERDQFTDRADGLHSEFMNY-KARAEDCEELLRIEEDVHWQTEGIISSSKDQDMD 390 400 410 420 430 440 510 520 530 540 550 560 mKIAA1 IAMIEQLREA-ELLQDPNGLSADIIERSILNLFPMDSGEASEFPDPSLNGQLQLETSPDR :::::::::: .:::::::::.:: :::.:::.:: :.:: :. : .::::.:::::: gi|490 IAMIEQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVC 450 460 470 480 490 500 570 580 590 600 610 620 mKIAA1 EVQNDLMLQSNGSQYSPNEIRENSPSVSPTANITAPFGLKPRSGSWCPEEVQGSLQAESS :::.:: ::::::::::::::::::.::::.: :::::::::: gi|490 EVQSDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRS----------------- 510 520 530 540 550 630 640 650 660 670 680 mKIAA1 PRRPQLLSRHVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHED :::::::::::::::::::::::::::::::::::::::::::::.:::: gi|490 ----------VFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVSLHED 560 570 580 590 600 690 700 710 720 730 740 mKIAA1 LGAALMDGVVLCHLANHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEE ::::::::::::::.::.::::::::::::::::::::::::::::::::::::::::: gi|490 LGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEA 610 620 630 640 650 660 750 760 770 mKIAA1 KLCLPHHILEEKGLVKVGTTVQALLDVTVTKALFT :: : ::. . .. ::..:: gi|490 DLCSPCDILQLD-FRHIRKTVDTLLALGEKAPPPTSALRSRDLIGFCLVHILFIVLVYIT 670 680 690 700 710 720 777 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 13:59:40 2009 done: Tue Mar 17 14:07:48 2009 Total Scan time: 1075.110 Total Display time: 0.300 Function used was FASTA [version 34.26.5 April 26, 2007]