Comparison of KIAA cDNA sequences between mouse and human (KIAA1542)

<<Original sequence data>>

mouse  mKIAA1542 (mpg00592)     length:   4150 bp, CDS:   119 -  2953
human   KIAA1542  (hh03408)     length:   5521 bp, CDS:   114 -  5078

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:    187 -   842      64       58      47.5
  CDS:    843 -  4592    1867      784      29.6
3'UTR:   4593 -  5888     700      187      21.1

amino acid

  CDS:    843 -  4592     547      635      53.7
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mpg00592     1 .................................................. 1
                                                                 
hh03408      1 GAGCGCACGGCGGCGGCAGAGGCGGCGGCGGCCGGGCCTAGGAGCGACTC 50

            51 ----+----*----+----*----+----*----+----*----+----* 100
mpg00592     1 .................................................. 1
                                                                 
hh03408     51 TCGGTCGTGCAGCGGCGGCGAGCGCTCGCGAGCGGCTGCGGGACGCGAGG 100

           101 ----+----*----+----*----+----*----+----*----+----* 150
mpg00592     1 .................................................. 1
                                                                 
hh03408    101 TTTCCGGAGCTGAGCTCAATGTGCAGCAATGGATGACGACAGCCTGGATG 150
                            A  Q  C  A  A  M  D  D  D  S  L  D  E

           151 ----+----*----+----*----+----*----+----*----+----* 200
                                                     *  V  -  T  
mpg00592     1 ....................................CATAGGTAGG.ACA 13
                                                   || |||| ||  | 
hh03408    151 AGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCT 200
                 L  V  A  R  S  P  G  P  D  G  H  P  Q  V  G  P  

           201 ----+----*----+----*----+----*----+----*----+----* 250
               A  D  L  *                                        
mpg00592    14 GCTGACCTGTAA...................................... 25
               || |||| |  |                                      
hh03408    201 GCGGACCCGGCAGGTGACTTTGAAGAAAGCAGCGTGGGCAGCAGTGGGGA 250
               A  D  P  A  G  D  F  E  E  S  S  V  G  S  S  G  D 

           251 ----+----*----+----*----+----*----+----*----+----* 300
mpg00592    26 .................................................. 26
                                                                 
hh03408    251 CTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAG 300
                S  G  D  D  S  D  S  E  H  G  D  G  T  D  G  E  D

           301 ----+----*----+----*----+----*----+----*----+----* 350
mpg00592    26 .................................................. 26
                                                                 
hh03408    301 ACGAGGGGGCGTCTGAGGAGGAAGACCTGGAAGACAGATCTGGTTCCGAG 350
                 E  G  A  S  E  E  E  D  L  E  D  R  S  G  S  E  

           351 ----+----*----+----*----+----*----+----*----+----* 400
mpg00592    26 .................................................. 26
                                                                 
hh03408    351 GATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAGGG 400
               D  S  E  D  D  G  E  T  L  L  E  V  A  G  T  Q  G 

           401 ----+----*----+----*----+----*----+----*----+----* 450
mpg00592    26 .................................................. 26
                                                                 
hh03408    401 GAAACTGGAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCT 450
                K  L  E  A  A  G  S  F  N  S  D  D  D  A  E  S  C

           451 ----+----*----+----*----+----*----+----*----+----* 500
mpg00592    26 .................................................. 26
                                                                 
hh03408    451 GCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTGGGGACGCCGGAG 500
                 P  I  C  L  N  A  F  R  D  Q  A  V  G  T  P  E  

           501 ----+----*----+----*----+----*----+----*----+----* 550
mpg00592    26 .................................................. 26
                                                                 
hh03408    501 AACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAA 550
               N  C  A  H  Y  F  C  L  D  C  I  V  E  W  S  K  N 

           551 ----+----*----+----*----+----*----+----*----+----* 600
                   H  S  R  C  V  V  Q  G  L  L  V  S  T  L  E  T
mpg00592    26 ....CATTCCCGTTGTGTTGTGCAGGGACTATTAGTGTCCACTCTGGAAA 71
                    ||||| ||   ||||  |     |||||   || || |       
hh03408    551 TGCCAATTCCTGTCCAGTTGATCGAACTCTATTTAAGTGCATTTGTATTC 600
                A  N  S  C  P  V  D  R  T  L  F  K  C  I  C  I  R

           601 ----+----*----+----*----+----*----+----*----+----* 650
                 E  *  F  Q  C  L  F  *  S  Y  F  T              
mpg00592    72 CAGAGTAGTTTCAGTGTCTGTTCTGATCATATTTCACA............ 109
                ||   | |||    ||    ||| |  | |  || ||            
hh03408    601 GAGCTCAATTTGGTGGTAAAATCTTAAAAAAGATCCCAGTGGAGAACACC 650
                 A  Q  F  G  G  K  I  L  K  K  I  P  V  E  N  T  

           651 ----+----*----+----*----+----*----+----*----+----* 700
mpg00592   110 .................................................. 110
                                                                 
hh03408    651 AAAGCGAGCGAGGAGGAGGAGGACCCGACCTTCTGTGAGGTGTGCGGCAG 700
               K  A  S  E  E  E  E  D  P  T  F  C  E  V  C  G  R 

           701 ----+----*----+----*----+----*----+----*----+----* 750
mpg00592   110 .................................................. 110
                                                                 
hh03408    701 GAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGT 750
                S  D  R  E  D  R  L  L  L  C  D  G  C  D  A  G  Y

           751 ----+----*----+----*----+----*----+----*----+----* 800
mpg00592   110 .................................................. 110
                                                                 
hh03408    751 ACCACATGGAATGCTTGGACCCCCCTCTCCAGGAGGTGCCGGTGGACGAG 800
                 H  M  E  C  L  D  P  P  L  Q  E  V  P  V  D  E  

           801 ----+----*----+----*----+----*----+----*----+----* 850
                                                V  I  E  L  V  T 
mpg00592   110 ................................TGTCATTGAACTTGTTAC 127
                                               |||| |||    || | |
hh03408    801 TGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGATGC 850
               W  F  C  P  E  C  A  A  P  G  V  V  L  A  A  D  A 

           851 ----+----*----+----*----+----*----+----*----+----* 900
                -     V  G  R  V  A  I  *  L  L  F  F            
mpg00592   128 AGG..AGGTGGGAAGGGTTGCTATCTGACTTCTGTTTTTT.......... 165
                ||    ||| |   ||  |   |||  || || ||   |          
hh03408    851 GGGTCCCGTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGC 900
                G  P  V  S  E  E  E  V  S  L  L  L  A  D  V  V  P

           901 ----+----*----+----*----+----*----+----*----+----* 950
mpg00592   166 .................................................. 166
                                                                 
hh03408    901 CCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACCCGGGCGATAGCC 950
                 T  T  S  R  L  R  P  R  A  G  R  T  R  A  I  A  

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mpg00592   166 .................................................. 166
                                                                 
hh03408    951 AGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGAT 1000
               R  T  R  Q  S  E  R  V  R  A  T  V  N  R  N  R  I 

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mpg00592   166 .................................................. 166
                                                                 
hh03408   1001 CTCCACGGCCAGGAGGGTCCAGCACACACCAGGGCGCCTCGGGTCTTCCC 1050
                S  T  A  R  R  V  Q  H  T  P  G  R  L  G  S  S  L

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mpg00592   166 .................................................. 166
                                                                 
hh03408   1051 TGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTG 1100
                 L  D  E  A  I  E  A  V  A  T  G  L  S  T  A  V  

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mpg00592   166 .................................................. 166
                                                                 
hh03408   1101 TATCAGCGCCCCCTGACGCCGCGCACTCCCGCCCGACGGAAGAGGAAGAC 1150
               Y  Q  R  P  L  T  P  R  T  P  A  R  R  K  R  K  T 

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mpg00592   166 .................................................. 166
                                                                 
hh03408   1151 AAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCAT 1200
                R  R  R  K  K  V  P  G  R  K  K  T  P  S  G  P  S

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mpg00592   166 .................................................. 166
                                                                 
hh03408   1201 CCGCAAAAAGTAAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGA 1250
                 A  K  S  K  S  S  A  T  R  S  K  K  R  Q  H  R  

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mpg00592   166 .................................................. 166
                                                                 
hh03408   1251 GTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGCTC 1300
               V  K  K  R  R  G  K  K  V  K  S  E  A  T  T  R  S 

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mpg00592   166 .................................................. 166
                                                                 
hh03408   1301 TCGAATCGCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCA 1350
                R  I  A  R  T  L  G  L  R  R  P  V  H  S  S  C  I

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpg00592   166 .................................................. 166
                                                                 
hh03408   1351 TCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTGCTGAGAGCG 1400
                 P  S  V  L  K  P  V  E  P  S  L  G  L  L  R  A  

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mpg00592   166 .................................................. 166
                                                                 
hh03408   1401 GATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGA 1450
               D  I  G  A  A  S  L  S  L  F  G  D  P  Y  E  L  D 

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mpg00592   166 .................................................. 166
                                                                 
hh03408   1451 TCCCTTCGACAGCAGTGAAGAGCTTTCTGCAAACCCTCTTTCCCCTCTGA 1500
                P  F  D  S  S  E  E  L  S  A  N  P  L  S  P  L  S

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mpg00592   166 .................................................. 166
                                                                 
hh03408   1501 GTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCC 1550
                 A  K  R  R  A  L  S  R  S  A  L  Q  S  H  Q  P  

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mpg00592   166 .................................................. 166
                                                                 
hh03408   1551 GTGGCCAGGCCCGTCTCCGTGGGGCTTTCCAGGAGGCGCCTCCCTGCCGC 1600
               V  A  R  P  V  S  V  G  L  S  R  R  R  L  P  A  A 

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mpg00592   166 .................................................. 166
                                                                 
hh03408   1601 GGTGCCAGAGCCAGACTTGGAGGAGGAGCCAGTGCCTGACCTGCTGGGCA 1650
                V  P  E  P  D  L  E  E  E  P  V  P  D  L  L  G  S

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mpg00592   166 .................................................. 166
                                                                 
hh03408   1651 GCATCCTGTCGGGCCAGAGCCTCCTGATGCTGGGCAGCAGTGATGTCATC 1700
                 I  L  S  G  Q  S  L  L  M  L  G  S  S  D  V  I  

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
                                                   A  P  V  S  L 
mpg00592   166 ...................................AGCTCCTGTTTCTCT 180
                                                   ||||| |||||| |
hh03408   1701 ATCCACCGCGACGGCTCCCTCAGCGCCAAGAGGGCGGCTCCAGTTTCTTT 1750
               I  H  R  D  G  S  L  S  A  K  R  A  A  P  V  S  F 

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
                Q  R  N  S  V  T  Q  S  R  E  E  S  R  L  R  D  N
mpg00592   181 TCAGCGAAATTCTGTGACTCAATCCAGAGAAGAGTCCAGGCTCAGAGACA 230
               ||||||||| || |  | ||  |||||||  ||     |  |||  | | 
hh03408   1751 TCAGCGAAACTCAGGCAGTCTGTCCAGAGGGGAAGAAGGATTCAAGGGCT 1800
                Q  R  N  S  G  S  L  S  R  G  E  E  G  F  K  G  C

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
                 P  Q  P  G  A  L  P  S  E  S  A  S  G  G  F  V  
mpg00592   231 ACCCGCAGCCTGGGGCACTACCCTCAGAGAGTGCATCTGGTGGATTCGTG 280
                || ||||||  | ||||| ||||| | |||  |  |    ||       
hh03408   1801 GCCTGCAGCCCCGAGCACTGCCCTCCGGGAGCCCGGCCCAAGGCCCGTCA 1850
                 L  Q  P  R  A  L  P  S  G  S  P  A  Q  G  P  S  

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
               G  D  R  Q  P  N  S  G  L  S  C           T  A  L 
mpg00592   281 GGAGACAGACAACCAAACTCAGGGCTGAGCTGTGGGAATAGAACAGCTCT 330
               ||| |||| | ||  | | ||||||| ||||||           ||    
hh03408   1851 GGAAACAGGCCACAGAGCACAGGGCTCAGCTGT.........CAAGGCAG 1891
               G  N  R  P  Q  S  T  G  L  S  C           Q  G  R 

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
                C  C  L  P  A  R  I  A  Q  T  P  V  R  S  D  P  S
mpg00592   331 GTGCTGTCTCCCTGCCCGCATTGCCCAGACACCTGTGAGGTCAGATCCCT 380
               || | |   ||| |||||||  ||   | | |||||||||   ||     
hh03408   1892 GTCCCGCACCCCCGCCCGCACCGCGGGGGCGCCTGTGAGGCTGGACTTGC 1941
                S  R  T  P  A  R  T  A  G  A  P  V  R  L  D  L  P

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
                 L  T  P  R  S  G  L  S  R  T  L  S  D  E  N  R  
mpg00592   381 CACTGACTCCTCGCTCAGGTCTGTCTAGGACCCTTTCAGATGAGAACAGG 430
               ||    | ||| |  | | || | || ||| | | ||| ||| ||    |
hh03408   1942 CAGCAGCCCCTGGGGCGGTTCAGGCTCGGAACTTGTCAAATGGGAGTGTG 1991
                 A  A  P  G  A  V  Q  A  R  N  L  S  N  G  S  V  

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
               P  S  R  T  H  S  S  S  P  Q  L  N  G  S  -       
mpg00592   431 CCCAGCCGGACACACAGCAGCAGCCCCCAACTCAATGGCTCCAA...... 474
               ||  ||   | ||| |||  |||||||    |||| ||| ||||      
hh03408   1992 CCTGGCTTCAGACAGAGCCACAGCCCCTGGTTCAACGGCACCAACAAGCA 2041
               P  G  F  R  Q  S  H  S  P  W  F  N  G  T  N  K  H 

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
                   V  R  V  S  S  A  S  T  K  I     V  T  H  S  S
mpg00592   475 ...TGTACGGGTTAGTTCTGCCTCGACTAAGATC...GTGACTCATTCTA 518
                    | |   ||   |||||| || ||||||||      |   ||||||
hh03408   2042 CACCTTGCCCCTTGCCTCTGCCGCGTCTAAGATCTCAAGCAGAGATTCTA 2091
                T  L  P  L  A  S  A  A  S  K  I  S  S  R  D  S  K

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
                 F  P  S  K  N  T  A  S  G  L  P  Q  R  T  G  P  
mpg00592   519 GCTTTCCATCGAAAAATACAGCTTCTGGGCTTCCTCAGAGAACAGGTCCC 568
                    ||||     | |   |   | |||| ||| | ||   |||  |||
hh03408   2092 AGCCCCCATGTCGCAGTGTGGTGCCGGGGCCTCCCCTGAAGCCAGCGCCC 2141
                 P  P  C  R  S  V  V  P  G  P  P  L  K  P  A  P  

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
               R  R  P  D  F  S  K  L  P  R  I  P  K  I  H  R  D 
mpg00592   569 AGGAGACCTGATTTCTCCAAGCTACCCAGGATACCAAAGATCCATCGGGA 618
               || ||| | ||  ||||  |||||||||||||||||||||||    | ||
hh03408   2142 AGAAGAACAGACATCTCTGAGCTACCCAGGATACCAAAGATCAGGAGAGA 2191
               R  R  T  D  I  S  E  L  P  R  I  P  K  I  R  R  D 

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
                G  N  K  S  T  Q  D  Q  A  P  A  S  G  H  I  V  E
mpg00592   619 TGGCAATAAGAGCACGCAGGACCAGGCCCCAGCCAGCGGCCACATTGTCG 668
               || |  |    |||  | |||   |||||| |||  ||| || |   | |
hh03408   2192 TGACGGTGGTGGCAGACGGGATGCGGCCCCGGCCCACGGGCAGAGCATTG 2241
                D  G  G  G  R  R  D  A  A  P  A  H  G  Q  S  I  E

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
                 L  P  S  T  C  I  S  R  L  T  G  R  E  G  P  G  
mpg00592   669 AGCTCCCTAGCACTTGCATCAGCCGCCTGACTGGCAGGGAAGGCCCTGGG 718
               || |||| ||  | ||||||||||| |||||||||||||| ||| | |||
hh03408   2242 AGATCCCCAGTGCCTGCATCAGCCGACTGACTGGCAGGGAGGGCACCGGG 2291
                 I  P  S  A  C  I  S  R  L  T  G  R  E  G  T  G  

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
               Q  P  G  R  G     R  V  D  S  E  P  S  S  R  G  P 
mpg00592   719 CAGCCAGGACGAGGC...CGAGTCGACAGTGAGCCAAGCAGCAGGGGTCC 765
               |||||||| ||||||   || |  || || ||| | ||||||||||  ||
hh03408   2292 CAGCCAGGGCGAGGCACACGGGCAGAGAGCGAGGCCAGCAGCAGGGTGCC 2341
               Q  P  G  R  G  T  R  A  E  S  E  A  S  S  R  V  P 

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
                Q  E  T  G  S  H  T  S  G  S  R  P  P  A  P  S  S
mpg00592   766 CCAGGAGACTGGCTCACACACAAGTGGTTCTCGACCTCCTGCGCCCAGCT 815
               || |||| | ||    |||||  |  | || || || || || |||||||
hh03408   2342 CCGGGAGCCCGGGGTGCACACGGGCAGCTCCCGGCCCCCAGCCCCCAGCT 2391
                R  E  P  G  V  H  T  G  S  S  R  P  P  A  P  S  S

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
                 H  G  S  L  A  H  L  G  P  S  R  G  K  G  I  G  
mpg00592   816 CCCATGGCAGCTTAGCCCATCTAGGGCCCTCAAGAGGAAAGGGCATTGGG 865
               |||||||||| || ||||  || || || |||||||| || ||  | |||
hh03408   2392 CCCATGGCAGTTTGGCCCCACTGGGACCATCAAGAGGGAAAGGGGTCGGG 2441
                 H  G  S  L  A  P  L  G  P  S  R  G  K  G  V  G  

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
               S  S  F  E  S  F  R  I  N  I  P  G  N  T  A  H  C 
mpg00592   866 TCTAGCTTTGAAAGTTTCCGGATCAACATCCCTGGGAACACTGCACATTG 915
               || | |||||| || ||||||||||| || ||||| ||||  ||||||| 
hh03408   2442 TCGACCTTTGAGAGCTTCCGGATCAATATTCCTGGAAACATGGCACATTC 2491
               S  T  F  E  S  F  R  I  N  I  P  G  N  M  A  H  S 

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
                S  Q  L  S  S  P  G  F  C  N  T  F  R  P  V  D  S
mpg00592   916 CAGCCAGCTGTCCAGCCCTGGATTCTGTAACACGTTCCGGCCGGTAGACA 965
               ||||||||| ||||||||||| |||||||||||||||||||| || ||| 
hh03408   2492 CAGCCAGCTCTCCAGCCCTGGCTTCTGTAACACGTTCCGGCCTGTGGACG 2541
                S  Q  L  S  S  P  G  F  C  N  T  F  R  P  V  D  D

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
                 K  V  Q  R  K  E  T  P  F  P  L  F  S  I  K  K  
mpg00592   966 GCAAGGTGCAGAGGAAGGAGACCCCGTTCCCCCTCTTCTCCATCAAGAAG 1015
                 |||| |||||||||||||| ||| |  |||||||||||||||||||||
hh03408   2542 ATAAGGAGCAGAGGAAGGAGAACCCCTCACCCCTCTTCTCCATCAAGAAG 2591
                 K  E  Q  R  K  E  N  P  S  P  L  F  S  I  K  K  

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
               P  K  Q  L  K  S  E  I  Y  D  P  F  D  P  T  G  S 
mpg00592  1016 CCGAAACAACTCAAAAGCGAAATCTATGACCCCTTTGACCCCACTGGCTC 1065
                |||| || ||    |||||  |||| ||||| |  |||||||| |||||
hh03408   2592 ACGAAGCAGCTGCGGAGCGAGGTCTACGACCCATCCGACCCCACCGGCTC 2641
               T  K  Q  L  R  S  E  V  Y  D  P  S  D  P  T  G  S 

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
                D  S  S  P  P  S  S  S  P  E  S  L  G  P  G  L  L
mpg00592  1066 GGACTCTAGCCCTCCTAGCAGCAGCCCAGAGAGTCTTGGTCCAGGCCTCC 1115
                ||||| ||| | ||| |||||||||| |||||   ||| || |||||||
hh03408   2642 CGACTCCAGCGCCCCTGGCAGCAGCCCCGAGAGGTCTGGCCCCGGCCTCC 2691
                D  S  S  A  P  G  S  S  P  E  R  S  G  P  G  L  L

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
                 P  S  E  I  T  R  T  I  S  I  N  S  P  K  A  P  
mpg00592  1116 TACCCTCTGAGATCACAAGAACTATCTCCATCAACAGCCCAAAGGCCCCA 1165
               | ||||||||||||||| |||| ||||||||||||||||| |||||||  
hh03408   2692 TGCCCTCTGAGATCACACGAACCATCTCCATCAACAGCCCGAAGGCCCAG 2741
                 P  S  E  I  T  R  T  I  S  I  N  S  P  K  A  Q  

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
               A  F  Q  T  V  R  C  V  T  S  Y  R  V  E  S  I  F 
mpg00592  1166 GCCTTCCAGACTGTGCGCTGTGTTACCTCCTACAGGGTAGAAAGCATCTT 1215
                |  | ||| |||||||||| || |||||||||| ||| || ||||||||
hh03408   2742 ACGGTGCAGGCTGTGCGCTGCGTCACCTCCTACACGGTGGAGAGCATCTT 2791
               T  V  Q  A  V  R  C  V  T  S  Y  T  V  E  S  I  F 

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
                G  T              E  P  Q  P  P  S  E  P  V  S  G
mpg00592  1216 TGGGACTGAGATGGAACCTGAGCCCCAGCCCCCTAGTGAGCCTGTATCTG 1265
               ||| |            | |||||| | ||||||   |  ||    || |
hh03408   2792 TGGTA............CAGAGCCCGAACCCCCTCTCGGACCGTCCTCCG 2829
                G  T              E  P  E  P  P  L  G  P  S  S  A

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
                 M  L  E  L  L  S  K  G  S  A  E  G  T  S  D  L  
mpg00592  1266 GCATGCTGGAGTTACTCAGCAAGGGATCTGCTGAGGGAACCTCTGATTTG 1315
                ||||    || | |   |    |   |||| |||||  |||||||   |
hh03408   2830 CCATGTCCAAGCTCCGGGGTGCAGTGGCTGCCGAGGGGGCCTCTGACACG 2879
                 M  S  K  L  R  G  A  V  A  A  E  G  A  S  D  T  

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
               E  Q  E                 E  P  T  E  I  R  G  S  T 
mpg00592  1316 GAGCAAGAGGGACTAGGGGAAATAGAGCCTACAGAGATTCGGGGCTCCAC 1365
               |||| ||||               ||||| |||||||  | ||||    |
hh03408   2880 GAGCGAGAG...............GAGCCCACAGAGAGCCAGGGCCTGGC 2914
               E  R  E                 E  P  T  E  S  Q  G  L  A 

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
                A  R  T  Q  R  P  P  P  P  D  P  W  D  D  E  D  E
mpg00592  1366 AGCCCGGACACAGAGGCCACCCCCACCAGACCCTTGGGATGATGAGGACG 1415
                ||||||   | ||||||| |||| ||||| || |||||||| ||||| |
hh03408   2915 TGCCCGGCTGCGGAGGCCATCCCCCCCAGAGCCCTGGGATGAGGAGGATG 2964
                A  R  L  R  R  P  S  P  P  E  P  W  D  E  E  D  G

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
                 V  S  C  T  P  F  F  G  S  E  E  R  T  V  T  C  
mpg00592  1416 AAGTGTCCTGTACACCCTTCTTTGGCTCTGAGGAACGGACAGTGACGTGT 1465
                 | ||| || |   ||||||||||||||||||| ||||| ||||| |||
hh03408   2965 GGGCGTCTTGCAGCACCTTCTTTGGCTCTGAGGAGCGGACGGTGACCTGT 3014
                 A  S  C  S  T  F  F  G  S  E  E  R  T  V  T  C  

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
               V  T  V  E  E  P  G  V  L  P  S  P  D  A  P  Q  I 
mpg00592  1466 GTGACTGTTGAGGAGCCAGGTGTTCTACCAAGCCCAGATGCTCCACAGAT 1515
               |||||||| | |||||| |  |  | ||| ||||| || |  |  |||  
hh03408   3015 GTGACTGTCGTGGAGCCGGAAGCCCCACCCAGCCCGGACGTGCTGCAGGC 3064
               V  T  V  V  E  P  E  A  P  P  S  P  D  V  L  Q  A 

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
                T  T  H  R  I  V  E  F  R  A  S  S  R  S  R  S  T
mpg00592  1516 CACCACCCACAGAATTGTGGAGTTCAGGGCCTCATCCCGTTCCCGCTCCA 1565
                 ||||||||||| | |||||| ||||| || | ||||| ||||||||||
hh03408   3065 TGCCACCCACAGAGTCGTGGAGCTCAGGCCCCCTTCCCGGTCCCGCTCCA 3114
                A  T  H  R  V  V  E  L  R  P  P  S  R  S  R  S  T

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
                 S  S  S  R  S  R  K  K  T  K  K  K        K  V  
mpg00592  1566 CCTCCAGCTCCCGAAGCAGGAAGAAAACGAAGAAGAAGAAGAAAAAGGTT 1615
               | ||||||||||| |||||||||||  | |||| ||||      | ||| 
hh03408   3115 CATCCAGCTCCCGCAGCAGGAAGAAGGCCAAGAGGAAG......AGGGTG 3158
                 S  S  S  R  S  R  K  K  A  K  R  K        R  V  

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
               A  R  E  H  Q  R  T  R  S  S  T  R  S  G  S  R  D 
mpg00592  1616 GCCAGAGAGCACCAGAGGACACGCTCCAGCACTCGCTCTGGCTCCAGGGA 1665
                |||| ||||||    |||| |||||  | || |||||||  ||||||||
hh03408   3159 TCCAGGGAGCACGGACGGACGCGCTCTGGGACGCGCTCTGAATCCAGGGA 3208
               S  R  E  H  G  R  T  R  S  G  T  R  S  E  S  R  D 

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
                R  T  S  R  S  V  S  -     V  A  E  E  H  T  R  R
mpg00592  1666 CAGGACTTCACGCTCAGTATCTC...CAGTTGCTGAGGAACACACCAGGA 1712
               |||||  ||  | ||||  || |   |||| | |||||| | | ||||||
hh03408   3209 CAGGAGCTCGAGGTCAGCGTCACCATCAGTGGGTGAGGAGCGCCCCAGGA 3258
                R  S  S  R  S  A  S  P  S  V  G  E  E  R  P  R  R

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
                 H  R  A  K  T  K  S  R  R  S  S  S  D  R  A  S  
mpg00592  1713 GGCACAGAGCCAAGACTAAGAGCCGGAGGTCTTCCAGTGACCGTGCCAGC 1762
               ||||  |  ||||| | ||||||||| |||| |||||||||||  |||||
hh03408   3259 GGCAGCGGTCCAAGGCCAAGAGCCGGCGGTCCTCCAGTGACCGCTCCAGC 3308
                 Q  R  S  K  A  K  S  R  R  S  S  S  D  R  S  S  

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
               S  Q  D  R  A  K  R  R  K  D  R  D  D  S     R  E 
mpg00592  1763 AGCCAGGACAGAGCAAAGAGGAGGAAGGACAGAGACGACAGAGACAGGGA 1812
               ||||  ||  |||| ||||||| ||| | ||  ||| | ||   ||||||
hh03408   3309 AGCCGAGAGCGAGCTAAGAGGAAGAAAGCCAAGGACAAGAG...CAGGGA 3355
               S  R  E  R  A  K  R  K  K  A  K  D  K  S     R  E 

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
                H  R  R  G  S  W  G  Q        C  R  R  K  S  R  S
mpg00592  1813 GCATAGGCGGGGTTCCTGGGGTCATGGCAGGTGCCGGCGGAAGTCCAGGT 1862
               ||| ||||||||  ||||||| ||        ||||| ||| |||| |||
hh03408   3356 GCACAGGCGGGGCCCCTGGGGCCA......CAGCCGGAGGACGTCCCGGT 3399
                H  R  R  G  P  W  G  H        S  R  R  T  S  R  S

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
                 R  S  G  S  P  G  S  S  S  C  E  R  H  E  S  K  
mpg00592  1863 CTCGCTCAGGGAGCCCTGGCAGTTCTTCCTGTGAGCGCCATGAGAGTAAG 1912
               | || || |||||||||||||| ||||||| ||||| | ||||||||| |
hh03408   3400 CGCGGTCGGGGAGCCCTGGCAGCTCTTCCTATGAGCACTATGAGAGTAGG 3449
                 R  S  G  S  P  G  S  S  S  Y  E  H  Y  E  S  R  

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
               R  R  K  R  R  H  S  G  S  R  S  R  -             
mpg00592  1913 AGACGGAAGAGGCGACATTCGGGGTCCAGGTCTCGGGG............ 1950
               |    |||||   |    || | ||||||  |||||||            
hh03408   3450 AAGAAGAAGAAAAGGAGATCAGCGTCCAGACCTCGGGGAAGGGAGTGCTC 3499
               K  K  K  K  R  R  S  A  S  R  P  R  G  R  E  C  S 

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
                      S  S  L  E  R  D  R  R  H  K  H     R  E  R
mpg00592  1951 ......CAGCAGTCTGGAGAGGGACCGGAGACACAAACAT...CGGGAGA 1991
                     |||||| |||||||||  | | || ||||| |||   |||||  
hh03408   3500 CCCCACCAGCAGCCTGGAGAGGCTCTGCAGGCACAAGCATCAGCGGGAAC 3549
                P  T  S  S  L  E  R  L  C  R  H  K  H  Q  R  E  R

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
                 S  R  E  R  M  D  K  Q  E  S  V  T  R  S  R  E  
mpg00592  1992 GGAGCCGAGAGCGAATGGACAAGCAGGAGAGTGTGACCCGGTCCCGGGAG 2041
               | ||||  |||||    |||| | ||||||||||| |  || |||| || 
hh03408   3550 GCAGCCACGAGCGGCCAGACAGGAAGGAGAGTGTGGCGTGGCCCCGAGAC 3599
                 S  H  E  R  P  D  R  K  E  S  V  A  W  P  R  D  

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
               R  R  R  W  R  S  R  S  P  S  L  E  H  R  P  -    
mpg00592  2042 AGGAGGAGGTGGCGATCTCGGTCGCCTAGCTTGGAGCATAGGCCAC.... 2087
                |||||| | || | || ||||| || |||| |||||| ||| |||    
hh03408   3600 CGGAGGAAGCGGAGGTCCCGGTCCCCAAGCTCGGAGCACAGGGCACGGGA 3649
               R  R  K  R  R  S  R  S  P  S  S  E  H  R  A  R  E 

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
                      R  P  P  S  R  E  K              R  A  H  S
mpg00592  2088 .....GAAGGCCACCTTCCCGTGAGAAG............CGTGCCCATT 2120
                    |  |||| |  ||||||||||||            ||  ||||||
hh03408   3650 GCACAGGCGGCCTCGGTCCCGTGAGAAGTGGCCGCAGACCCGGTCCCATT 3699
                H  R  R  P  R  S  R  E  K  W  P  Q  T  R  S  H  S

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
                 P  E  K  K  G  P  V  R  E  V  S  P  A  P  A  T  
mpg00592  2121 CCCCAGAGAAAAAGGGGCCTGTGAGGGAGGTTTCCCCAGCCCCTGCTACA 2170
               |||||||||  |||||| |||||||||||| ||||||||| ||   | ||
hh03408   3700 CCCCAGAGAGGAAGGGGGCTGTGAGGGAGGCTTCCCCAGCGCCCCTTGCA 3749
                 P  E  R  K  G  A  V  R  E  A  S  P  A  P  L  A  

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
               Q  G  E  S  R  Q  D  G  D  H  S  A  E  P  P  V    
mpg00592  2171 CAGGGGGAGTCGAGGCAGGATGGAGACCACTCTGCTGAGCCTCCGGTTTC 2220
               ||||||||| |  ||| ||| |    || | |      |||  |  |   
hh03408   3750 CAGGGGGAGCCAGGGCGGGAAGACCTCCCCACCAGGTTGCCAGCCTT... 3796
               Q  G  E  P  G  R  E  D  L  P  T  R  L  P  A  L    

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
                                  E  V  V  S  V  L  P  E  V  V  V
mpg00592  2221 AGAAGTAAGTGTCTTGCCTGAGGTAGTAAGTGTCCTGCCAGAGGTGGTTG 2270
                                  | || || |  ||||  ||| ||||||| | 
hh03408   3797 ..................GGGGGAAGCACATGTCTCGCCGGAGGTGGCTA 3828
                                  G  E  A  H  V  S  P  E  V  A  T

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
                 A  D  L  N  P  P  E  V  P  P  V  L  A  E  P  V  
mpg00592  2271 TGGCTGACCTGAACCCTCCAGAAGTCCCTCCTGTCCTGGCAGAGCCAGTT 2320
                ||| |||  |  ||| |   | |  || ||||||||||  | | ||| |
hh03408   3829 CGGCCGACAAGGCCCCCCTGCAGGCTCCCCCTGTCCTGGAGGTGGCAGCT 3878
                 A  D  K  A  P  L  Q  A  P  P  V  L  E  V  A  A  

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
               A  H  V  P  -        D  L  D  Y  G  E  S  V  E  A 
mpg00592  2321 GCCCATGTGCCTGA......GGACCTGGACTATGGTGAGTCTGTGGAGGC 2364
               |    || ||| ||      ||||||||| ||||| || || ||||||||
hh03408   3879 GAGTGTGAGCCGGACGACCTGGACCTGGATTATGGCGACTCCGTGGAGGC 3928
               E  C  E  P  D  D  L  D  L  D  Y  G  D  S  V  E  A 

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
                G  H  V  F  E  D  F  S  N  E  A  I  F  I  Q  L  D
mpg00592  2365 AGGCCACGTCTTTGAGGATTTTTCAAATGAAGCCATCTTCATCCAGCTCG 2414
                || ||||||||||| ||||| ||||  || ||| | |||||||||||||
hh03408   3929 CGGACACGTCTTTGATGATTTCTCAAGCGACGCCGTTTTCATCCAGCTCG 3978
                G  H  V  F  D  D  F  S  S  D  A  V  F  I  Q  L  D

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
                 D  M  S  S  P  P  S  P  E  S  T  D  S  S  P  E  
mpg00592  2415 ATGACATGAGCTCGCCTCCTTCTCCTGAGAGTACAGACTCCTCCCCTGAG 2464
               |||||||||||||||| |||||||| || || |||||||| ||||| |||
hh03408   3979 ATGACATGAGCTCGCCACCTTCTCCCGAAAGCACAGACTCTTCCCCGGAG 4028
                 D  M  S  S  P  P  S  P  E  S  T  D  S  S  P  E  

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
               R  D  F  P  P  N  P  I  L  P  P  A  S  L          
mpg00592  2465 AGAGACTTCCCACCAAATCCCATACTGCCCCCAGCCAGCCTTCCACAAGA 2514
                ||||||||||||  || ||     ||||||||||||||||         
hh03408   4029 CGAGACTTCCCACTGAAGCCTGCGTTGCCCCCAGCCAGCCT......... 4069
               R  D  F  P  L  K  P  A  L  P  P  A  S  L          

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
                   T  L  P  T  I  Q  R  E  V  L  P  I  H  S  E  D
mpg00592  2515 CAGTACTTTACCTACCATCCAAAGGGAGGTGTTACCCATTCACAGTGAAG 2564
                    |  |  |  ||||||| |||||||||| |   || |||  |||||
hh03408   4070 ...GGCCGTGGCCGCCATCCAGAGGGAGGTGTCATTGATGCACGATGAAG 4116
                   A  V  A  A  I  Q  R  E  V  S  L  M  H  D  E  D

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
                 I  S  K  P  V  P  Q  A  L  A  P  S  D  Q  S  L  
mpg00592  2565 ATATCTCAAAGCCTGTGCCCCAGGCCTTGGCCCCATCAGACCAGAGTCTG 2614
               |    ||  ||||    |||| | |   || | |    || |    | ||
hh03408   4117 ACCCTTCGCAGCCCCCACCCCTGCCAGAGGGCACCCAGGAGCCACATTTG 4166
                 P  S  Q  P  P  P  L  P  E  G  T  Q  E  P  H  L  

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
               L  K  Q  D  T  V  E     T  T  T  T  P  S  T  P  A 
mpg00592  2615 CTCAAGCAAGACACTGTAGAGATCACCACTACAACTCCCAGCACCCCAGC 2664
               |||| ||  ||| | |  |||   |   ||    | |||||  |||| | 
hh03408   4167 CTCAGGCCGGACGCGGCTGAG...AAGGCTGAGGCACCCAGTTCCCCGGA 4213
               L  R  P  D  A  A  E     K  A  E  A  P  S  S  P  D 

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
                V  V  P  M  T  K     D  S  P  V  L  S  A  R  G  W
mpg00592  2665 TGTGGTGCCCATGACAAAG...GACAGTCCGGTGCTGAGTGCAAGAGGAT 2711
               ||||| |||   |   |||   ||||| ||      |||||  || | | 
hh03408   4214 TGTGGCGCCTGCGGGGAAGGAAGACAGCCCCTCTGCGAGTGGGAGGGTAC 4263
                V  A  P  A  G  K  E  D  S  P  S  A  S  G  R  V  Q

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
                 E  A  V  R  P  R  D  A  V  A  Q  A  P  L  L  R  
mpg00592  2712 GGGAAGCAGTCAGGCCCAGGGATGCTGTGGCCCAGGCCCCACTGCTACGA 2761
                ||| |||| | ||||   ||| |  ||  | ||| |||| ||||| || 
hh03408   4264 AGGAGGCAGCCCGGCCTGAGGAGGTGGTTTCGCAGACCCCCCTGCTGCGG 4313
                 E  A  A  R  P  E  E  V  V  S  Q  T  P  L  L  R  

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
               S  R  T  L  V  K  R  V  T  W  N  L  Q  E  A  E  H 
mpg00592  2762 TCCCGAACCCTGGTGAAAAGAGTCACCTGGAACCTGCAGGAAGCAGAACA 2811
               ||| || ||||||||||  | ||||||||||||||||||||  | ||   
hh03408   4314 TCCAGAGCCCTGGTGAAGCGGGTCACCTGGAACCTGCAGGAGTCGGAGAG 4363
               S  R  A  L  V  K  R  V  T  W  N  L  Q  E  S  E  S 

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
                S  T  P     A  L  D  R  A                        
mpg00592  2812 CAGCACGCCAGCAGCCCTGGACAGAGATCCAAGTGAGTTTGTCCTGCCCC 2861
               |||| | |   | |||  ||||||||                        
hh03408   4364 CAGCGCCC...CCGCCGAGGACAGAG........................ 4386
                S  A  P     A  E  D  R  A                        

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mpg00592  2862 CGGCTGGGACCCTGGTGGTGGTTGTCCTTATGGGTCAGGGGTGTAGAGCA 2911
                                                                 
hh03408   4387 .................................................. 4387

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mpg00592  2912 GGCATGAGGCAGTGGGGCAGCCTCCCTAAGAGCCTCTCCTGACAATTTTG 2961
                                                                 
hh03408   4387 .................................................. 4387

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mpg00592  2962 GGGCCCCTACCCAAGTACAGCTTCTAACAGACACATCTGCAGCTCGGCCT 3011
                                                                 
hh03408   4387 .................................................. 4387

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
mpg00592  3012 CGGTTCCCACTGCTGGTTCTCTGAAAATGTTTTGGCCAGGGTTGACCACA 3061
                                                                 
hh03408   4387 .................................................. 4387

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
                                             S  G  T  P  L  Q  R 
mpg00592  3062 AGGCATCCACACTCCCTGTCTGTTGGGTCCTCAGGGACACCACTTCAGAG 3111
                                           || |  || |||||||||| ||
hh03408   4387 ............................CCCCCCGGGCACCACTTCACAG 4408
                                             P  R  A  P  L  H  R 

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
                P  Q  R  P  Q  E  G  D  W  D  A  E  D  R  A  L  I
mpg00592  3112 GCCCCAGAGGCCCCAGGAAGGAGACTGGGATGCAGAGGACAGGGCCCTCA 3161
               ||| |||| |||||  ||||||| ||||||    |||||   ||||| ||
hh03408   4409 GCCACAGAAGCCCCGAGAAGGAGCCTGGGACATGGAGGATGTGGCCCCCA 4458
                P  Q  K  P  R  E  G  A  W  D  M  E  D  V  A  P  T

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
                 G  F  Q  Q  A     F  S  E  L  P  P  P  I  H  V  
mpg00592  3162 TAGGATTTCAGCAGGCACCATTCTCCGAGCTGCCCCCTCCCATCCACGTG 3211
                |||  |   |||||   | |||||||||||||||  |||||  ||||||
hh03408   4459 CAGGGGTCAGGCAGG...CGTTCTCCGAGCTGCCCTTTCCCAGTCACGTG 4505
                 G  V  R  Q  A     F  S  E  L  P  F  P  S  H  V  

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
               L  Q  E  S  G  L  P  D  A  D  P  S                
mpg00592  3212 CTCCAGGAGTCTGGGTTACCTGATGCAGATCCCTCTCAGGTGGGTGCTGG 3261
               || | |||  | ||||| || ||  |||| ||||||              
hh03408   4506 CTTCCGGAACCCGGGTTCCCAGACACAGACCCCTCT.............. 4541
               L  P  E  P  G  F  P  D  T  D  P  S                

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
mpg00592  3262 GCTAGAGGGACATGGTCCTTGTGCTGGGCTTTTTGGGCTGCCCTGCCTAG 3311
                                                                 
hh03408   4542 .................................................. 4542

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
mpg00592  3312 GGCTTAGACCTCATGGTACTACTTCCTTTCTATACAGCCCCCTGGTGCTC 3361
                                                                 
hh03408   4542 .................................................. 4542

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
mpg00592  3362 CCAGGGCAGAAGGGCTTCCAGCTGCTGGGACTCTGCACTCAGCAGGGGGT 3411
                                                                 
hh03408   4542 .................................................. 4542

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
                        Q  V  Y  S  P  N  M  P  P  P  L  A  Q  P 
mpg00592  3412 ATTCTTGCCCAGGTTTACAGCCCCAACATGCCACCACCCTTGGCTCAGCC 3461
                        |||||||||||||||  | |||| ||  ||  ||| |||||
hh03408   4542 .........CAGGTTTACAGCCCCGGCCTGCCGCCTGCCCCGGCCCAGCC 4582
                        Q  V  Y  S  P  G  L  P  P  A  P  A  Q  P 

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
                S  S  I  L  P  Y  A  L  V  S  Q  P  S  V  Q  L  I
mpg00592  3462 CTCAAGCATCCTGCCCTATGCACTGGTCAGCCAGCCCTCAGTCCAGTTGA 3511
               |||||||||||  ||||  |||||||||||||||||| | |||||||| |
hh03408   4583 CTCAAGCATCCCACCCTGCGCACTGGTCAGCCAGCCCACGGTCCAGTTCA 4632
                S  S  I  P  P  C  A  L  V  S  Q  P  T  V  Q  F  I

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
                 L  Q  G  T  L  P  L  A  G  C  G  T  A  Q  S  L  
mpg00592  3512 TCCTGCAGGGGACCCTTCCCCTAGCAGGCTGCGGTACAGCACAGAGCCTG 3561
               |||| ||||||| ||| || ||||  ||||| ||  ||||||||| ||||
hh03408   4633 TCCTTCAGGGGAGCCTGCCGCTAGTGGGCTGTGGGGCAGCACAGACCCTG 4682
                 L  Q  G  S  L  P  L  V  G  C  G  A  A  Q  T  L  

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
               A  P  V  P  T  M  P  A  T  V  S  E  L  A  V  P  T 
mpg00592  3562 GCACCAGTGCCCACAATGCCAGCTACAGTCTCAGAGCTAGCTGTTCCAAC 3611
               || ||||||||| |    |   |  ||| |||||||| |||   || | |
hh03408   4683 GCCCCAGTGCCCGCTGCCCTGACCCCAGCCTCAGAGCCAGCCAGTCAAGC 4732
               A  P  V  P  A  A  L  T  P  A  S  E  P  A  S  Q  A 

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
                -        N  N  S  E  E  R  T  A  T  P  K  T  A  A
mpg00592  3612 CA......CCAACAACTCAGAAGAAAGGACTGCTACTCCCAAAACAGCTG 3655
               ||      ||| |||||| || || | |||  |  | ||||    |||||
hh03408   4733 CACTGCAGCCAGCAACTCGGAGGAGAAGACCCCGGCCCCCAGGCTAGCTG 4782
                T  A  A  S  N  S  E  E  K  T  P  A  P  R  L  A  A

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
                 E  K  T  K  K  E  E  Y  M  K  K  L  H  M  Q  E  
mpg00592  3656 CTGAGAAGACCAAAAAGGAGGAGTACATGAAGAAGCTGCACATGCAAGAA 3705
               | ||||| ||||| |||||||||||||||||||||||||||||||| || 
hh03408   4783 CGGAGAAAACCAAGAAGGAGGAGTACATGAAGAAGCTGCACATGCAGGAG 4832
                 E  K  T  K  K  E  E  Y  M  K  K  L  H  M  Q  E  

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
               R  A  V  E  E  V  K  L  A  I  K  P  F  Y  Q  K  R 
mpg00592  3706 CGGGCTGTGGAGGAGGTGAAGCTGGCCATTAAACCCTTCTACCAGAAGAG 3755
               || |||||||||||||||||||||||||| || |||||||||||||||||
hh03408   4833 CGTGCTGTGGAGGAGGTGAAGCTGGCCATCAAGCCCTTCTACCAGAAGAG 4882
               R  A  V  E  E  V  K  L  A  I  K  P  F  Y  Q  K  R 

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
                E  V  T  K  E  E  Y  K  D  I  L  R  K  A  V  Q  K
mpg00592  3756 AGAAGTGACCAAGGAGGAGTACAAGGACATACTGCGCAAAGCCGTGCAGA 3805
                || |||||||||||||||||||||||||| |||||||| ||||||||||
hh03408   4883 GGAGGTGACCAAGGAGGAGTACAAGGACATCCTGCGCAAGGCCGTGCAGA 4932
                E  V  T  K  E  E  Y  K  D  I  L  R  K  A  V  Q  K

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
                 I  C  H  S  K  S  G  E  I  N  P  V  K  V  A  N  
mpg00592  3806 AGATCTGCCACAGCAAGAGTGGTGAAATCAACCCTGTAAAGGTGGCCAAC 3855
               |||||||||||||||||||||| || |||||||| || ||||||||||||
hh03408   4933 AGATCTGCCACAGCAAGAGTGGAGAGATCAACCCCGTGAAGGTGGCCAAC 4982
                 I  C  H  S  K  S  G  E  I  N  P  V  K  V  A  N  

          5501 ----+----*----+----*----+----*----+----*----+----* 5550
               L  V  K  A  Y  V  D  K  Y  R  H  M  R  R  H  K  K 
mpg00592  3856 CTGGTGAAGGCCTATGTGGACAAATACAGGCATATGCGCAGACACAAGAA 3905
               ||||||||||| || |||||||| |||||||| |||||||| ||||||||
hh03408   4983 CTGGTGAAGGCGTACGTGGACAAGTACAGGCACATGCGCAGGCACAAGAA 5032
               L  V  K  A  Y  V  D  K  Y  R  H  M  R  R  H  K  K 

          5551 ----+----*----+----*----+----*----+----*----+----* 5600
                T  E  G  G  E  E  P  P  T  Q  G  A  E  T  *      
mpg00592  3906 GACTGAAGGTGGAGAGGAGCCACCCACTCAGGGTGCTGAGACCTGAGGCT 3955
                 | || |  || |||||||| ||||| ||||| || |||  ||||||| 
hh03408   5033 ACCAGAGGCCGGGGAGGAGCCGCCCACGCAGGGGGCCGAGGGCTGAGGCC 5082
                P  E  A  G  E  E  P  P  T  Q  G  A  E  G  *      

          5601 ----+----*----+----*----+----*----+----*----+----* 5650
mpg00592  3956 AGCCACTC.......................................... 3963
               || || ||                                          
hh03408   5083 AGGCAATCACGGGCTATGCCCGGGGAGCTGTCGGGAGTGGCGGGAATCGG 5132

          5651 ----+----*----+----*----+----*----+----*----+----* 5700
mpg00592  3964 ..............................................TCTG 3967
                                                              | |
hh03408   5133 GGCCATGCCCGGGGAGCTGTCGGGAGTGGCGGGAATCGGGGCCATGCCCG 5182

          5701 ----+----*----+----*----+----*----+----*----+----* 5750
mpg00592  3968 GGGAGGCATCCCCAGCGGGAAAGAAATGGGGCCGCCAGCACTCCTGCCTC 4017
               |||||   ||   || ||     ||  |||| |  || ||  ||||||  
hh03408   5183 GGGAGCTGTCGGGAGTGGCGGGAAATGGGGGGCATCACCATGCCTGCCGT 5232

          5751 ----+----*----+----*----+----*----+----*----+----* 5800
mpg00592  4018 TGAGGGTCT..CATGGTACCTG...TCTGCACCTGTCTTGCTTATAATTG 4062
                | |   ||    ||  |||||   | ||||||||| ||||| | | |||
hh03408   5233 CGGGTTCCTGCGCTGACACCTGGTCTGTGCACCTGTGTTGCTCACAGTTG 5282

          5801 ----+----*----+----*----+----*----+----*----+----* 5850
mpg00592  4063 AAAACTGGACTTTTTTATATGTATATTATAGATACACTGTTTCCATTGTG 4112
               ||||||||||  |||| ||||||||||||||| ||||||||||||     
hh03408   5283 AAAACTGGACACTTTTGTATGTATATTATAGAGACACTGTTTCCA..... 5327

          5851 ----+----*----+----*----+----*----+----*----+----* 5900
mpg00592  4113 TTCTAATTTATCAAAAATGGCTTATGTTTAGAAACTTT............ 4150
               |||||||||||||||||||| |||| ||||||||| |             
hh03408   5328 TTCTAATTTATCAAAAATGGATTATCTTTAGAAACCTCTTGATTGACTTA 5377

          5901 ----+----*----+----*----+----*----+----*----+----* 5950
mpg00592  4151 .................................................. 4151
                                                                 
hh03408   5378 CTACTTGGAAGATAAAGCACTTGGTGATCAAGAGGGGCTCCTGGTGGGGT 5427

          5951 ----+----*----+----*----+----*----+----*----+----* 6000
mpg00592  4151 .................................................. 4151
                                                                 
hh03408   5428 GGCGCGTCCTTGATAAATCTCTAGGTGGCCTCCCGCCAACAGCTGCTGTG 5477

          6001 ----+----*----+----*----+----*----+----*---- 6044
mpg00592  4151 ............................................ 4151
                                                           
hh03408   5478 TACCTTTGGCTCTGAATTAGGAATATCTTTACTTTCTCTTTTCC 5521