# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpg00446.fasta.nr -Q ../query/mKIAA1795.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1795, 531 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918701 sequences Expectation_n fit: rho(ln(x))= 5.7105+/-0.000192; mu= 9.7777+/- 0.011 mean_var=94.9159+/-18.033, 0's: 33 Z-trim: 39 B-trim: 7 in 1/65 Lambda= 0.131645 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|73998460|ref|XP_543946.2| PREDICTED: similar to ( 554) 3408 657.6 2.7e-186 gi|109460122|ref|XP_345034.3| PREDICTED: similar t ( 574) 3336 643.9 3.6e-182 gi|109463877|ref|XP_001054322.1| PREDICTED: simila ( 619) 3336 643.9 3.8e-182 gi|109090123|ref|XP_001093998.1| PREDICTED: simila ( 547) 3245 626.6 5.5e-177 gi|110287677|sp|Q6ZPI3.2|LCOR_MOUSE RecName: Full= ( 433) 2840 549.6 6.6e-154 gi|60334801|gb|AAH90652.1| Lcor protein [Mus muscu ( 433) 2831 547.9 2.2e-153 gi|149040164|gb|EDL94202.1| similar to DKFZP564P19 ( 433) 2811 544.1 3e-152 gi|108936028|sp|Q96JN0.2|LCOR_HUMAN RecName: Full= ( 433) 2787 539.5 7.1e-151 gi|30268387|emb|CAD38921.2| hypothetical protein [ ( 433) 2781 538.4 1.6e-150 gi|30722299|emb|CAD91159.1| hypothetical protein [ ( 433) 2779 538.0 2e-150 gi|74196148|dbj|BAE32988.1| unnamed protein produc ( 436) 2756 533.6 4.2e-149 gi|74183077|dbj|BAC31007.2| unnamed protein produc ( 397) 2615 506.8 4.5e-141 gi|31418481|gb|AAH53359.1| MLR2 protein [Homo sapi ( 406) 2610 505.9 8.9e-141 gi|194678763|ref|XP_584325.4| PREDICTED: similar t ( 406) 2607 505.3 1.3e-140 gi|29747945|gb|AAH50068.1| Lcor protein [Mus muscu ( 380) 2506 486.1 7.4e-135 gi|124504635|gb|AAI28543.1| LCOR protein [Homo sap ( 268) 1694 331.8 1.5e-88 gi|30722297|emb|CAD91160.1| hypothetical protein [ ( 200) 1272 251.5 1.6e-64 gi|126273157|ref|XP_001374231.1| PREDICTED: simila (1691) 1195 237.6 2.1e-59 gi|47208262|emb|CAF91037.1| unnamed protein produc ( 607) 821 166.3 2.3e-38 gi|118341581|gb|AAI27574.1| Zgc:158268 [Danio reri ( 464) 745 151.7 4.1e-34 gi|220672934|emb|CAX12736.1| novel protein similar ( 480) 745 151.7 4.3e-34 gi|194041785|ref|XP_001928609.1| PREDICTED: simila (1551) 702 144.0 3e-31 gi|114632102|ref|XP_507956.2| PREDICTED: similar t (1556) 702 144.0 3e-31 gi|119570347|gb|EAW49962.1| ligand-dependent corep (1557) 702 144.0 3e-31 gi|194205806|ref|XP_001500481.2| PREDICTED: simila (1553) 692 142.1 1.1e-30 gi|224052684|ref|XP_002192446.1| PREDICTED: simila (1605) 637 131.7 1.6e-27 gi|220678159|emb|CAX13255.1| novel protein [Danio ( 382) 578 119.9 1.3e-24 gi|189526570|ref|XP_684050.3| PREDICTED: wu:fc17b0 (1668) 578 120.5 3.8e-24 gi|134025725|gb|AAI36245.1| LOC100125102 protein [ ( 832) 511 107.5 1.5e-20 gi|156229892|gb|AAI52024.1| LOC100127542 protein [ ( 201) 500 104.9 2.3e-20 gi|56269889|gb|AAH87288.1| LOC495928 protein [Xeno ( 125) 491 103.0 5.1e-20 gi|189442699|gb|AAI67565.1| LOC100125102 protein [ (1265) 500 105.5 9e-20 gi|47192124|emb|CAF92258.1| unnamed protein produc ( 109) 398 85.3 9.6e-15 gi|114593302|ref|XP_001162914.1| PREDICTED: transc ( 319) 404 86.8 9.8e-15 gi|149412301|ref|XP_001513101.1| PREDICTED: hypoth ( 630) 405 87.3 1.4e-14 gi|159163811|pdb|2COB|A Chain A, Solution Structur ( 70) 392 84.0 1.5e-14 gi|54673563|gb|AAH37322.3| Ligand dependent nuclea ( 318) 399 85.9 1.9e-14 gi|16549953|dbj|BAB70892.1| unnamed protein produc ( 213) 389 83.8 5.2e-14 gi|119613193|gb|EAW92787.1| transcription factor M ( 518) 389 84.1 1e-13 gi|109500706|ref|XP_001058603.1| PREDICTED: simila ( 624) 390 84.4 1e-13 gi|160395582|sp|Q8N3X6.4|LCORL_HUMAN RecName: Full ( 602) 389 84.2 1.1e-13 gi|114593304|ref|XP_517122.2| PREDICTED: hypotheti ( 603) 389 84.2 1.1e-13 gi|109073819|ref|XP_001103051.1| PREDICTED: simila ( 603) 389 84.2 1.1e-13 gi|148705681|gb|EDL37628.1| ligand dependent nucle ( 314) 385 83.2 1.2e-13 gi|26335719|dbj|BAC31560.1| unnamed protein produc ( 315) 385 83.2 1.2e-13 gi|26335960|dbj|BAC31678.1| unnamed protein produc ( 315) 385 83.2 1.2e-13 gi|53133518|emb|CAG32088.1| hypothetical protein [ ( 518) 387 83.8 1.3e-13 gi|119613194|gb|EAW92788.1| transcription factor M ( 184) 381 82.3 1.3e-13 gi|26334845|dbj|BAC31123.1| unnamed protein produc ( 393) 385 83.3 1.4e-13 gi|160395560|sp|Q5ZJK5.2|LCORL_CHICK RecName: Full ( 600) 387 83.8 1.5e-13 >>gi|73998460|ref|XP_543946.2| PREDICTED: similar to lig (554 aa) initn: 3479 init1: 3408 opt: 3408 Z-score: 3501.0 bits: 657.6 E(): 2.7e-186 Smith-Waterman score: 3408; 96.798% identity (99.435% similar) in 531 aa overlap (1-531:24-554) 10 20 30 mKIAA1 ALLKDLSLFKECDPESISDWAFDENCLFCCLKRDKVK ::::::::::.:. ::::::.::::::::::.::::: gi|739 MTFFVYDRGVLGFESILEGLFGPALLKDLSLFKDCERESISDWTFDENCLFCCLRRDKVK 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 GHLVGLDEPASGAGQEALLKQEHAKIIRLQRQAEEFLNAVFYRKDSPWVSDPNIPLVARE ::::::::::::::::::::::.:::::..:::::::::::::::::::::::::::::: gi|739 GHLVGLDEPASGAGQEALLKQEQAKIIRFERQAEEFLNAVFYRKDSPWVSDPNIPLVARE 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 IMQRMIQQFAAEYTSKTSSTQDPSQPNSTKNQSLPKASPVTTSPTAATTQNPVLSKLLMA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|739 IMQRMIQQFAAEYTSKNSSTQDPSQPNSTKNQSLPKASPVTTSPTAATTQNPVLSKLLMA 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 DQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCASSTSLSHSPGCSSTQGNGRPGRPSQY ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|739 DQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSLSHSPGCSSTQGNGRPGRPSQY 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 RPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTAASLGPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTAASLGPSG 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 LQNHGQHLILSREASWAKPHYEFSLSRMKFRGNGALSNISDLPFLAENSAFPKMAHQTKQ :::::::::::::::::::::::.::::::::::::::::::::::::::::::: :.:: gi|739 LQNHGQHLILSREASWAKPHYEFNLSRMKFRGNGALSNISDLPFLAENSAFPKMALQAKQ 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 DGKRDMSHSSPVDLKIPQVRGMDLSWESRTGDQYSYSSLVMGSQTESALSKKLRAILPKQ :::.: ::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DGKKDGSHASPVDLKIPQVRGMDLSWESRTGDQYSYSSLVMGSQTESALSKKLRAILPKQ 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 NRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSEILEEAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSEILEEAIS 430 440 450 460 470 480 460 470 480 490 500 510 mKIAA1 VVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVSVKIELDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVSVKIELDP 490 500 510 520 530 540 520 530 mKIAA1 QGEAAQSANESKTE ::::::::::::.: gi|739 QGEAAQSANESKNE 550 >>gi|109460122|ref|XP_345034.3| PREDICTED: similar to Mb (574 aa) initn: 3345 init1: 3100 opt: 3336 Z-score: 3426.9 bits: 643.9 E(): 3.6e-182 Smith-Waterman score: 3336; 95.292% identity (97.740% similar) in 531 aa overlap (1-531:45-574) 10 20 30 mKIAA1 ALLKDLSLFKECDPESISDWAFDENCLFCC ::::::::::::.::::::::::::::::: gi|109 RGFRQELDSWRHKLIHCVGFESILEGLFGPALLKDLSLFKECEPESISDWAFDENCLFCC 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA1 LKRDKVKGHLVGLDEPASGAGQEALLKQEHAKIIRLQRQAEEFLNAVFYRKDSPWVSDPN :.::::: . : . . .:.::::::::. :::::::::::::::::::::::::: gi|109 LRRDKVK-ECVWSTSSSETTENETLLKQEHAKVTRLQRQAEEFLNAVFYRKDSPWVSDPN 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA1 IPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKNQSLPKASPVTTSPTAATTQNPV :::::::::::::::::::::::.::::::::::::::::::::::::::::::: :::: gi|109 IPLVAREIMQRMIQQFAAEYTSKNSSTQDPSQPNSTKNQSLPKASPVTTSPTAATPQNPV 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA1 LSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCASSTSLSHSPGCSSTQGNGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCASSTSLSHSPGCSSTQGNGR 200 210 220 230 240 250 220 230 240 250 260 270 mKIAA1 PGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTA 260 270 280 290 300 310 280 290 300 310 320 330 mKIAA1 ASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFRGNGALSNISDLPFLAENSAFPK ::::::::::::::::::::::::::::::.:.:.::::::::::::::::::::::::: gi|109 ASLGPSGLQNHGQHLILSREASWAKPHYEFNLNRVKFRGNGALSNISDLPFLAENSAFPK 320 330 340 350 360 370 340 350 360 370 380 390 mKIAA1 MAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTGDQYSYSSLVMGSQTESALSKKL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|109 MAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTGDQYNYSSLVMGSQTESALSKKL 380 390 400 410 420 430 400 410 420 430 440 450 mKIAA1 RAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSE 440 450 460 470 480 490 460 470 480 490 500 510 mKIAA1 ILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVS 500 510 520 530 540 550 520 530 mKIAA1 VKIELDPQGEAAQSANESKTE ::::::::::::::::::::: gi|109 VKIELDPQGEAAQSANESKTE 560 570 >>gi|109463877|ref|XP_001054322.1| PREDICTED: similar to (619 aa) initn: 3345 init1: 3100 opt: 3336 Z-score: 3426.5 bits: 643.9 E(): 3.8e-182 Smith-Waterman score: 3336; 95.292% identity (97.740% similar) in 531 aa overlap (1-531:90-619) 10 20 30 mKIAA1 ALLKDLSLFKECDPESISDWAFDENCLFCC ::::::::::::.::::::::::::::::: gi|109 RGFRQELDSWRHKLIHCVGFESILEGLFGPALLKDLSLFKECEPESISDWAFDENCLFCC 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 LKRDKVKGHLVGLDEPASGAGQEALLKQEHAKIIRLQRQAEEFLNAVFYRKDSPWVSDPN :.::::: . : . . .:.::::::::. :::::::::::::::::::::::::: gi|109 LRRDKVK-ECVWSTSSSETTENETLLKQEHAKVTRLQRQAEEFLNAVFYRKDSPWVSDPN 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA1 IPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKNQSLPKASPVTTSPTAATTQNPV :::::::::::::::::::::::.::::::::::::::::::::::::::::::: :::: gi|109 IPLVAREIMQRMIQQFAAEYTSKNSSTQDPSQPNSTKNQSLPKASPVTTSPTAATPQNPV 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA1 LSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCASSTSLSHSPGCSSTQGNGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCASSTSLSHSPGCSSTQGNGR 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA1 PGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA1 ASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFRGNGALSNISDLPFLAENSAFPK ::::::::::::::::::::::::::::::.:.:.::::::::::::::::::::::::: gi|109 ASLGPSGLQNHGQHLILSREASWAKPHYEFNLNRVKFRGNGALSNISDLPFLAENSAFPK 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA1 MAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTGDQYSYSSLVMGSQTESALSKKL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|109 MAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTGDQYNYSSLVMGSQTESALSKKL 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA1 RAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSE 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA1 ILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVS 540 550 560 570 580 590 520 530 mKIAA1 VKIELDPQGEAAQSANESKTE ::::::::::::::::::::: gi|109 VKIELDPQGEAAQSANESKTE 600 610 >>gi|109090123|ref|XP_001093998.1| PREDICTED: similar to (547 aa) initn: 3245 init1: 3245 opt: 3245 Z-score: 3333.8 bits: 626.6 E(): 5.5e-177 Smith-Waterman score: 3245; 97.012% identity (99.602% similar) in 502 aa overlap (1-502:44-545) 10 20 30 mKIAA1 ALLKDLSLFKECDPESISDWAFDENCLFCC ::::::::::.:.:::::::.::::::::: gi|109 LSALPATTCITAEDPGSVGFESILEGLFGPALLKDLSLFKDCEPESISDWTFDENCLFCC 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA1 LKRDKVKGHLVGLDEPASGAGQEALLKQEHAKIIRLQRQAEEFLNAVFYRKDSPWVSDPN :.:::::::::::::: ::::::::::::.:::::..::::::::::::::::::::::: gi|109 LRRDKVKGHLVGLDEPDSGAGQEALLKQEQAKIIRFERQAEEFLNAVFYRKDSPWVSDPN 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA1 IPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKNQSLPKASPVTTSPTAATTQNPV :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|109 IPLVAREIMQRMIQQFAAEYTSKNSSTQDPSQPNSTKNQSLPKASPVTTSPTAATTQNPV 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA1 LSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCASSTSLSHSPGCSSTQGNGR :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|109 LSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSLSHSPGCSSTQGNGR 200 210 220 230 240 250 220 230 240 250 260 270 mKIAA1 PGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTA 260 270 280 290 300 310 280 290 300 310 320 330 mKIAA1 ASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFRGNGALSNISDLPFLAENSAFPK ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|109 ASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMKFRGNGALSNISDLPFLAENSAFPK 320 330 340 350 360 370 340 350 360 370 380 390 mKIAA1 MAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTGDQYSYSSLVMGSQTESALSKKL :: :.:::::.:.::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MALQAKQDGKKDVSHSSPVDLKIPQVRGMDLSWESRTGDQYSYSSLVMGSQTESALSKKL 380 390 400 410 420 430 400 410 420 430 440 450 mKIAA1 RAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSE 440 450 460 470 480 490 460 470 480 490 500 510 mKIAA1 ILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMSG 500 510 520 530 540 520 530 mKIAA1 VKIELDPQGEAAQSANESKTE >>gi|110287677|sp|Q6ZPI3.2|LCOR_MOUSE RecName: Full=Liga (433 aa) initn: 2840 init1: 2840 opt: 2840 Z-score: 2919.4 bits: 549.6 E(): 6.6e-154 Smith-Waterman score: 2840; 100.000% identity (100.000% similar) in 433 aa overlap (99-531:1-433) 70 80 90 100 110 120 mKIAA1 QAEEFLNAVFYRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKN :::::::::::::::::::::::::::::: gi|110 MQRMIQQFAAEYTSKTSSTQDPSQPNSTKN 10 20 30 130 140 150 160 170 180 mKIAA1 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL 340 350 360 370 380 390 490 500 510 520 530 mKIAA1 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE ::::::::::::::::::::::::::::::::::::::::::: gi|110 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE 400 410 420 430 >>gi|60334801|gb|AAH90652.1| Lcor protein [Mus musculus] (433 aa) initn: 2831 init1: 2831 opt: 2831 Z-score: 2910.2 bits: 547.9 E(): 2.2e-153 Smith-Waterman score: 2831; 99.769% identity (99.769% similar) in 433 aa overlap (99-531:1-433) 70 80 90 100 110 120 mKIAA1 QAEEFLNAVFYRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKN :::::::::::::::::::::::::::::: gi|603 MQRMIQQFAAEYTSKTSSTQDPSQPNSTKN 10 20 30 130 140 150 160 170 180 mKIAA1 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|603 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTPEYKVKERL 340 350 360 370 380 390 490 500 510 520 530 mKIAA1 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE ::::::::::::::::::::::::::::::::::::::::::: gi|603 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE 400 410 420 430 >>gi|149040164|gb|EDL94202.1| similar to DKFZP564P1916 p (433 aa) initn: 2811 init1: 2811 opt: 2811 Z-score: 2889.7 bits: 544.1 E(): 3e-152 Smith-Waterman score: 2811; 98.614% identity (99.769% similar) in 433 aa overlap (99-531:1-433) 70 80 90 100 110 120 mKIAA1 QAEEFLNAVFYRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKN :::::::::::::::.:::::::::::::: gi|149 MQRMIQQFAAEYTSKNSSTQDPSQPNSTKN 10 20 30 130 140 150 160 170 180 mKIAA1 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|149 QSLPKASPVTTSPTAATPQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR ::::::::::::::::::::::::::::::::::::::::::::::::::::.:.:.::: gi|149 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLNRVKFR 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DQYNYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL 340 350 360 370 380 390 490 500 510 520 530 mKIAA1 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE ::::::::::::::::::::::::::::::::::::::::::: gi|149 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE 400 410 420 430 >>gi|108936028|sp|Q96JN0.2|LCOR_HUMAN RecName: Full=Liga (433 aa) initn: 2858 init1: 2787 opt: 2787 Z-score: 2865.0 bits: 539.5 E(): 7.1e-151 Smith-Waterman score: 2787; 97.921% identity (99.769% similar) in 433 aa overlap (99-531:1-433) 70 80 90 100 110 120 mKIAA1 QAEEFLNAVFYRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKN :::::::::::::::.:::::::::::::: gi|108 MQRMIQQFAAEYTSKNSSTQDPSQPNSTKN 10 20 30 130 140 150 160 170 180 mKIAA1 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 PCAGSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|108 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMKFR 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG :::::::::::::::::::::::: :.:::::.:.::::::::::::::::::::::::: gi|108 GNGALSNISDLPFLAENSAFPKMALQAKQDGKKDVSHSSPVDLKIPQVRGMDLSWESRTG 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|108 DQYSYSSLVMGSQTESALSKKLRAILPKQSRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL 340 350 360 370 380 390 490 500 510 520 530 mKIAA1 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE :::::::::::::::::::::::::::::::::::::::::.: gi|108 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKNE 400 410 420 430 >>gi|30268387|emb|CAD38921.2| hypothetical protein [Homo (433 aa) initn: 2852 init1: 2781 opt: 2781 Z-score: 2858.9 bits: 538.4 E(): 1.6e-150 Smith-Waterman score: 2781; 97.691% identity (99.538% similar) in 433 aa overlap (99-531:1-433) 70 80 90 100 110 120 mKIAA1 QAEEFLNAVFYRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKN :::::::::::::::.:::::::::::::: gi|302 MQRMIQQFAAEYTSKNSSTQDPSQPNSTKN 10 20 30 130 140 150 160 170 180 mKIAA1 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 PCAGSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|302 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMKFR 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG :::::::::::::::::::::::: :.:::::.:.::::::::::::::::::::::::: gi|302 GNGALSNISDLPFLAENSAFPKMALQAKQDGKKDVSHSSPVDLKIPQVRGMDLSWESRTG 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ :::::::::::::::::::::::::::::.:::::::::::::::::::: ::::::::: gi|302 DQYSYSSLVMGSQTESALSKKLRAILPKQSRKSMLDAGPDSWGSDAEQSTPGQPYPTSDQ 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL 340 350 360 370 380 390 490 500 510 520 530 mKIAA1 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE :::::::::::::::::::::::::::::::::::::::::.: gi|302 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKNE 400 410 420 430 >>gi|30722299|emb|CAD91159.1| hypothetical protein [Homo (433 aa) initn: 2850 init1: 2779 opt: 2779 Z-score: 2856.8 bits: 538.0 E(): 2e-150 Smith-Waterman score: 2779; 97.691% identity (99.538% similar) in 433 aa overlap (99-531:1-433) 70 80 90 100 110 120 mKIAA1 QAEEFLNAVFYRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKTSSTQDPSQPNSTKN ::::: :::::::::.:::::::::::::: gi|307 MQRMIPQFAAEYTSKNSSTQDPSQPNSTKN 10 20 30 130 140 150 160 170 180 mKIAA1 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 QSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKS 40 50 60 70 80 90 190 200 210 220 230 240 mKIAA1 PCASSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 PCAGSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLK 100 110 120 130 140 150 250 260 270 280 290 300 mKIAA1 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFSLSRMKFR ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|307 VPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMKFR 160 170 180 190 200 210 310 320 330 340 350 360 mKIAA1 GNGALSNISDLPFLAENSAFPKMAHQTKQDGKRDMSHSSPVDLKIPQVRGMDLSWESRTG :::::::::::::::::::::::: :.:::::.:.::::::::::::::::::::::::: gi|307 GNGALSNISDLPFLAENSAFPKMALQAKQDGKKDVSHSSPVDLKIPQVRGMDLSWESRTG 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 DQYSYSSLVMGSQTESALSKKLRAILPKQNRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|307 DQYSYSSLVMGSQTESALSKKLRAILPKQSRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQ 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 EGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERL 340 350 360 370 380 390 490 500 510 520 530 mKIAA1 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKTE :::::::::::::::::::::::::::::::::::::::::.: gi|307 GTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKNE 400 410 420 430 531 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 21:51:25 2009 done: Sun Mar 15 21:58:38 2009 Total Scan time: 967.070 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]