FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0687.ptfa, 1310 aa vs ./tmplib.26680 library 1767707 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.5737+/-0.00745; mu= 7.2877+/- 0.484 mean_var=722.1737+/-169.112, 0's: 0 Z-trim: 27 B-trim: 0 in 0/36 Lambda= 0.0477 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4090 ( 483 res) mej00160 ( 483) 2155 164 6.3e-41 mKIAA0551 ( 453 res) mbg05521 ( 453) 1654 129 1.5e-30 mKIAA4026 ( 986 res) mbg12171 ( 986) 399 44 0.00022 mKIAA0204 ( 1307 res) mbg01039 (1307) 396 44 0.00028 mKIAA0642 ( 1048 res) mbg08843 (1048) 360 41 0.0014 >>mKIAA4090 ( 483 res) mej00160 (483 aa) initn: 2193 init1: 2069 opt: 2155 Z-score: 827.2 bits: 163.9 E(): 6.3e-41 Smith-Waterman score: 2240; 71.343% identity (75.264% ungapped) in 499 aa overlap (814-1310:9-483) 790 800 810 820 830 840 mKIAA0 EEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLI :.:.::.::.::: :: . :: : . mKIAA4 RGGGGRRWGDTDSVSTMVVHD-VEEISGTQPSYGGGTM 10 20 30 850 860 870 880 890 900 mKIAA0 VRQSTVDQKRASH-HESNGFAGRIHLLPDLLQQSHSSSTSSTSSSPSSSQPTPTMSPQTP : : : ...:. .:::... :::..: ::: :: . . :.: mKIAA4 VVQRTPEEERSLLLADSNGYTN----LPDVVQPSHS--------------PTENSKGQSP 40 50 60 70 910 920 930 940 950 960 mKIAA0 QDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTT-VTSVVGFSCDGLRPEA : ... :: . : : ..:::: :.: . : . :. : .:..:: .: : . mKIAA4 PTKDGGSDYQSRG--LVKAPGKSSFTMFVDLGIYQPGGSGDTIPITALVG--GEGGRLDQ 80 90 100 110 120 130 970 980 990 1000 1010 1020 mKIAA0 IRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLL .. : .:::::::::::::: .:.::::::::::::::::::::::::::::::.::::: mKIAA4 LQFD-VRKGSVVNVNPTNTRAHSETPEIRKYKKRFNSEILCAALWGVNLLVGTENGLMLL 140 150 160 170 180 190 1030 1040 1050 1060 1070 1080 mKIAA0 DRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEK ::::::::: ::.::::::::::::::.:.:::::..::::::::::::::::::::::: mKIAA4 DRSGQGKVYGLIGRRRFQQMDVLEGLNLLITISGKRNKLRVYYLSWLRNKILHNDPEVEK 200 210 220 230 240 250 1090 1100 1110 1120 1130 1140 mKIAA0 KQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHK :::::::::.::: ::.:::::::::::::::.:::::::::::::::::::::..: :. mKIAA4 KQGWTTVGDMEGCGHYRVVKYERIKFLVIALKNSVEVYAWAPKPYHKFMAFKSFADLPHR 260 270 280 290 300 310 1150 1160 1170 1180 1190 1200 mKIAA0 PLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDG :::::::::::::::::::: :::::::::::. ::::.:.::: .: :::::.:::::: mKIAA4 PLLVDLTVEEGQRLKVIYGSSAGFHAVDVDSGNSYDIYIPVHIQSQITPHAIIFLPNTDG 320 330 340 350 360 370 1210 1220 1230 1240 1250 1260 mKIAA0 MELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGH ::.:.::::::::::::::: ::::::::::::::::: ::: ::::::::: ::::::: mKIAA4 MEMLLCYEDEGVYVNTYGRIIKDVVLQWGEMPTSVAYICSNQIMGWGEKAIETRSVETGH 380 390 400 410 420 430 1270 1280 1290 1300 1310 mKIAA0 LDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW :::::::::::::::::::::::::::::::::::::::::.:. ...: mKIAA4 LDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLNRNCIMNW 440 450 460 470 480 >>mKIAA0551 ( 453 res) mbg05521 (453 aa) initn: 1947 init1: 1647 opt: 1654 Z-score: 641.0 bits: 129.4 E(): 1.5e-30 Smith-Waterman score: 1898; 62.725% identity (70.179% ungapped) in 499 aa overlap (748-1239:1-453) 720 730 740 750 760 770 mKIAA0 GSPSPRQESAAKKPDDKKEVFRPLKPAGEVDLTALAKELRAV---EDVRPPHKVTDYSSS :::::::::: . : :: .:::::::: mKIAA0 DLTALAKELRELRIEETNRPLKKVTDYSSS 10 20 30 780 790 800 810 820 830 mKIAA0 SEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAM :::: ...::::: :.: : ... . : . .:.: .. . .: .:. : mKIAA0 SEESESSEEEEEDGESETHDGTVAVSDIPRLIPTGAPGNNEQYNMGMVGTHG-LETSHAD 40 50 60 70 80 840 850 860 870 880 890 mKIAA0 T----PSKEGTLIVRQSTVDQKRASHHESNGFAGRIHLLPDLLQQSHSSSTSSTSSSPSS : :.::::..:... ..::..: .::::::.:.: :::.::::: :.. mKIAA0 TFGGSISREGTLMIRETAEEKKRSGHSDSNGFAGHINL-PDLVQQSHS---------PAG 90 100 110 120 130 900 910 920 930 940 950 mKIAA0 SQPTPTMSPQTPQDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVV . :: .. . ... : .:.. .:. mKIAA0 T-PTEGLGRVSTHSQ----EMDSGAESLKAL----------------------------- 140 150 160 960 970 980 990 1000 1010 mKIAA0 GFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNL :. . :: : . . .:: ::::::::: ::.::::::::::::::::::::::::::: mKIAA0 -FTSELLRQEQAKLNEARKISVVNVNPTNIRPHSDTPEIRKYKKRFNSEILCAALWGVNL 170 180 190 200 210 220 1020 1030 1040 1050 1060 1070 mKIAA0 LVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRN :::::.:::::::::::::: ::.:::::::::::::::::::::::.:::::::::::: mKIAA0 LVGTENGLMLLDRSGQGKVYNLINRRRFQQMDVLEGLNVLVTISGKKNKLRVYYLSWLRN 230 240 250 260 270 280 1080 1090 1100 1110 1120 1130 mKIAA0 KILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFM .:::::::::::::: ::::::::.::::::::::::::::::..::.:::::::::::: mKIAA0 RILHNDPEVEKKQGWITVGDLEGCIHYKVVKYERIKFLVIALKNAVEIYAWAPKPYHKFM 290 300 310 320 330 340 1140 1150 1160 1170 1180 1190 mKIAA0 AFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKP :::::..: :::::::::::::::::::.:: .:::..:::::. ::::.:.::: .: : mKIAA0 AFKSFADLQHKPLLVDLTVEEGQRLKVIFGSHTGFHVIDVDSGNSYDIYIPSHIQGNITP 350 360 370 380 390 400 1200 1210 1220 1230 1240 1250 mKIAA0 HAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEK :::.:::.:::::.::::::::::::::::::::::::::::::::. . mKIAA0 HAIVILPKTDGMEMLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVGRL 410 420 430 440 450 1260 1270 1280 1290 1300 1310 mKIAA0 AIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW >>mKIAA4026 ( 986 res) mbg12171 (986 aa) initn: 712 init1: 195 opt: 399 Z-score: 171.2 bits: 43.6 E(): 0.00022 Smith-Waterman score: 491; 30.631% identity (36.170% ungapped) in 333 aa overlap (38-331:51-371) 10 20 30 40 50 60 mKIAA0 LARSRSGDPGKMANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQ :: ..:.: .:.:..:.:::... .:: mKIAA4 MAFANFRRILRLSTFEKRKSREYEHVRRDLDPNDVWEIVGELGDGAFGKVYKAKNKETGA 30 40 50 60 70 80 70 80 90 100 110 120 mKIAA0 LAAIKVMDV-TEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFC ::: ::... .:.: :. .::..: .: :. ::. .: .::...::: mKIAA4 LAAAKVIETKSEEELEDYIVEIEILATCDHPY-IVKLLGAYY------YDGKLWIMIEFC 90 100 110 120 130 130 140 150 160 170 180 mKIAA0 GAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVK .:.. : . : : : . :..:..: :: ...::::.:. :::.: ..... mKIAA4 PGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHGKRIIHRDLKAGNVLMTLEGDIR 140 150 160 170 180 190 190 200 210 mKIAA0 LVDFGVSAQLDRTVGRRNTFIGK----GP------------------------------- :.::::::. .:. .:..::: .: mKIAA4 LADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVLCETMKDAPYDYKADIWSLGITLIEMAQ 200 210 220 230 240 250 220 230 240 250 260 mKIAA0 --PPLCDMHPMRALFLIPRNPPPRLKS-KKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHP :: ...:::.:. : .. :: : . .::: .: .:.. : :: :::. :::.:: mKIAA4 IEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLQHP 260 270 280 290 300 310 270 280 290 300 310 320 mKIAA0 FIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVP :. ... .: . . ... . :. : : . :. . :: .. .. .:: mKIAA4 FVSRVTSNKALR----ELVAEAKAEVMEEIEDGREDGEEEDAVDAVPPLVNHTQDSANVT 320 330 340 350 360 330 340 350 360 370 380 mKIAA0 GESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRR : mKIAA4 QPSLDSNKLLQDSSTPLPPSQPQEPVNGPCSQPSGDGPLQTTSPADGLSKNDNDLKVPVP 370 380 390 400 410 420 >>mKIAA0204 ( 1307 res) mbg01039 (1307 aa) initn: 663 init1: 209 opt: 396 Z-score: 169.1 bits: 43.6 E(): 0.00028 Smith-Waterman score: 531; 26.708% identity (31.311% ungapped) in 483 aa overlap (38-473:134-592) 10 20 30 40 50 60 mKIAA0 LARSRSGDPGKMANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQ .: ..:.. .:.:..:.:::... .:. mKIAA0 GKMSFFNFRKIFKLGSEKKKKQYEHVKRDLNPEEFWEIIGELGDGAFGKVYKAQNKETNV 110 120 130 140 150 160 70 80 90 100 110 120 mKIAA0 LAAIKVMDV-TEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFC ::: ::.:. .:.: :. .::..: . .: ::. :: ....::...::: mKIAA0 LAAAKVIDTKSEEELEDYMVEIDILASCDHP-NIVKLLDAFY------YENNLWILIEFC 170 180 190 200 210 130 140 150 160 170 180 mKIAA0 GAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVK ..:.. : : : :. : . .. :..: .:: ...::::.:. :.:.: ....: mKIAA0 AGGAV-DAVMLELERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIK 220 230 240 250 260 270 190 200 210 mKIAA0 LVDFGVSAQLDRTVGRRNTFIGK----GP------------------------------- :.::::::. ::. ::..::: .: mKIAA0 LADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 280 290 300 310 320 330 220 230 240 250 260 mKIAA0 --PPLCDMHPMRALFLIPRNPPPRL-KSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHP :: ...:::.:. : .. :: : . .:::..: .:.. :: :: : .: :::.:: mKIAA0 IEPPHHELNPMRVLLKIAKSEPPTLAQPSKWSSNFKDFLRKCLEKNVDARWTTSQLLQHP 340 350 360 370 380 390 270 280 290 300 310 320 mKIAA0 FIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVP :. . : . :: . . .. . :: .:.::.::: : . . .: mKIAA0 FVTVDSN-KPVRELIAE---------AKAEVTEEVEDGKEEDEEE------EAENALPIP 400 410 420 430 330 340 350 360 370 380 mKIAA0 GESTLRRDF-LRLQQENKERSEALRRQQLLQE-QQLREQEEYKRQLLAERQKRIEQQKEQ ... :. . ..:.: ..: ... .. .: ..... ..: :. .: mKIAA0 ANKRASSDLSIASSEEDKLSQNACILESVSERTEQSTSEDKFSNKILNEKPTTDGPEKAV 440 450 460 470 480 490 390 400 410 420 430 440 mKIAA0 RRRLEEQQRREREARRQQEREQRRREQEEKR-RLEELERRRKEEE---ERRRAEEEKRRV .. . . . .: .. .:.:: .::.: . .. . :.:. :: mKIAA0 DEHASDVNLETGAELNDQTVGIHENGREKKRPKLENLPDTQDQQTVDVNSVSEENENNRV 500 510 520 530 540 550 450 460 470 480 490 500 mKIAA0 --EREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQA : . . .. . ...... : :...:.: . . mKIAA0 TLETNTDCLKPEEDRNKENQETLESKLIQSEEINDTHIQTMDLVSQETGEKEADFQAVDN 560 570 580 590 600 610 510 520 530 540 550 560 mKIAA0 YLLSLQHDHRRPHAQQQPPPPQQQERSKPSFHAPEPKPHYDPADRAREVQWSHLASLKNN mKIAA0 EVGLTKEETQEKLGKDGTAQKVITSDRSSEVGTDEALDDTQKAAELSKAAQSGEGDEALA 620 630 640 650 660 670 >>mKIAA0642 ( 1048 res) mbg08843 (1048 aa) initn: 597 init1: 226 opt: 360 Z-score: 156.5 bits: 40.9 E(): 0.0014 Smith-Waterman score: 362; 32.862% identity (36.614% ungapped) in 283 aa overlap (260-520:407-682) 230 240 250 260 270 280 mKIAA0 PPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDR :..: . .. .: . ..:.. .. : mKIAA0 LYQMQHLQYQQFLIQQQYAQVLAQQQKAALSSQQQQQLALLLQQFQALKMRMSDQNIIPS 380 390 400 410 420 430 290 300 310 320 330 340 mKIAA0 TRKKRGEKDETEYEYSGSEEEEEEVPEQEG--EPSSIVNVPGESTLRRDFL-RLQQENKE . .. . : .:: : . . : . : .:. ..: ..: : .::: .: mKIAA0 VTRSVSVPD------TGSIWELQPAASQPAVWEGGSVWDLPLDTTAPGPSLEQLQQLEKA 440 450 460 470 480 490 350 360 370 380 390 mKIAA0 RSEALRRQQLLQEQQL-REQEEYKRQLLAERQK----RIEQQKEQRRRLEEQ--QRRERE .. :.... :.. ::.:: ::: .::. : .:..:..:: ::. .:...: mKIAA0 KAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEE 500 510 520 530 540 550 400 410 420 430 440 450 mKIAA0 A-RRQQERE---QRRREQEEKRRLEE----LERRRKEEEERRRAEEEKRRVEREQEYIRR : :::.:.: .:.::.::... :: ::.::.::::::. :: :. :.: : mKIAA0 ALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEAAKWAR 560 570 580 590 600 610 460 470 480 490 500 mKIAA0 QLEEEQRHLEILQQQLLQEQAMLL----ECRWREMEEHRQAERLQRQLQQEQAYLLSLQH . :: ::.:: . .. .: : : : . .:.: .:: . :.:: ::.: : ::. mKIAA0 EEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELELQRQKD-LMRQRQQQQEALRRLQQ 620 630 640 650 660 510 520 530 540 550 560 mKIAA0 DHRRPHAQQQPPPPQQQERSKPSFHAPEPKPHYDPADRAREVQWSHLASLKNNVSPVSRS .... . :. : mKIAA0 QQQQQQLAQMKLPSSSTWGQQSNTATCQSQATLSLAEIQKLEEERERQLREEQRRQQREL 670 680 690 700 710 720 1310 residues in 1 query sequences 1767707 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:26:14 2006 done: Mon Mar 27 10:26:15 2006 Scan time: 1.210 Display time: 0.240 Function used was FASTA [version 3.4t11 Apr 17, 2002]