# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpf01029.fasta.nr -Q ../query/mKIAA0646.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0646, 749 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7904213 sequences Expectation_n fit: rho(ln(x))= 5.3866+/-0.000195; mu= 12.3477+/- 0.011 mean_var=107.8419+/-20.399, 0's: 35 Z-trim: 103 B-trim: 104 in 1/66 Lambda= 0.123504 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|73972753|ref|XP_864751.1| PREDICTED: similar to ( 880) 3712 672.9 1.5e-190 gi|73972755|ref|XP_538896.2| PREDICTED: similar to (1090) 3712 673.0 1.7e-190 gi|109070995|ref|XP_001117035.1| PREDICTED: simila (1272) 3586 650.6 1.1e-183 gi|21362895|sp|Q8VC56.1|RNF8_MOUSE RecName: Full=E ( 488) 3243 589.0 1.4e-165 gi|68534363|gb|AAH99079.1| Ring finger protein 8 [ ( 487) 2911 529.8 9.1e-148 gi|73972751|ref|XP_864730.1| PREDICTED: similar to ( 487) 2367 432.9 1.4e-118 gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN RecName: Full= ( 487) 2308 422.4 2e-115 gi|194040433|ref|XP_001927699.1| PREDICTED: simila ( 512) 2290 419.2 1.9e-114 gi|90075162|dbj|BAE87261.1| unnamed protein produc ( 486) 2245 411.2 4.8e-112 gi|21362894|sp|O76064.1|RNF8_HUMAN RecName: Full=E ( 485) 2242 410.6 7e-112 gi|30584345|gb|AAP36421.1| Homo sapiens ring finge ( 486) 2242 410.6 7e-112 gi|62897089|dbj|BAD96485.1| ring finger protein 8 ( 485) 2238 409.9 1.1e-111 gi|119624348|gb|EAX03943.1| ring finger protein 8, ( 485) 2237 409.8 1.3e-111 gi|194223467|ref|XP_001500360.2| PREDICTED: simila ( 550) 2230 408.6 3.3e-111 gi|75061601|sp|Q5R4I2.1|RNF8_PONAB RecName: Full=E ( 486) 2209 404.8 4.1e-110 gi|119624350|gb|EAX03945.1| ring finger protein 8, ( 448) 1822 335.8 2.2e-89 gi|194390908|dbj|BAG60572.1| unnamed protein produ ( 417) 1815 334.5 5e-89 gi|118088051|ref|XP_419487.2| PREDICTED: hypotheti ( 523) 1669 308.6 4e-81 gi|8052306|emb|CAB92239.1| AIP37 protein [Mus musc ( 275) 1631 301.5 2.8e-79 gi|149549697|ref|XP_001511244.1| PREDICTED: simila ( 573) 1571 291.2 7.6e-76 gi|26339874|dbj|BAC33600.1| unnamed protein produc ( 837) 1471 273.5 2.3e-70 gi|74214476|dbj|BAE31091.1| unnamed protein produc ( 837) 1471 273.5 2.3e-70 gi|81906080|sp|Q9DBC3.1|FTSJ2_MOUSE RecName: Full= ( 837) 1471 273.5 2.3e-70 gi|74191719|dbj|BAE32821.1| unnamed protein produc ( 837) 1453 270.3 2.1e-69 gi|81883532|sp|Q5U2Z5.1|FTSJ2_RAT RecName: Full=Ft ( 837) 1453 270.3 2.1e-69 gi|45478098|gb|AAS66220.1| LRRG00129 [Rattus norve (1035) 1453 270.4 2.4e-69 gi|109070997|ref|XP_001117026.1| PREDICTED: simila ( 835) 1364 254.5 1.2e-64 gi|158258565|dbj|BAF85253.1| unnamed protein produ ( 835) 1364 254.5 1.2e-64 gi|126010617|gb|AAI33560.1| FTSJD2 protein [Bos ta ( 835) 1353 252.5 4.8e-64 gi|149549695|ref|XP_001511215.1| PREDICTED: simila ( 853) 1238 232.0 7.2e-58 gi|13365825|dbj|BAB39298.1| hypothetical protein [ ( 750) 1130 212.7 4.1e-52 gi|224047575|ref|XP_002187143.1| PREDICTED: hypoth ( 828) 1113 209.7 3.6e-51 gi|82184587|sp|Q6GQ76.1|FTSJ2_XENLA RecName: Full= ( 846) 1064 201.0 1.5e-48 gi|189442295|gb|AAI67621.1| LOC100170565 protein [ ( 503) 1036 195.8 3.5e-47 gi|56206049|emb|CAI19602.1| FtsJ methyltransferase ( 372) 1006 190.3 1.2e-45 gi|47224577|emb|CAG03561.1| unnamed protein produc ( 768) 964 183.2 3.3e-43 gi|82177092|sp|Q803R5.1|FTSJ2_DANRE RecName: Full= ( 829) 960 182.5 5.8e-43 gi|47123933|gb|AAH70792.1| Rnf8-b-prov protein [Xe ( 532) 910 173.4 2.1e-40 gi|28279440|gb|AAH46256.1| Rnf8-prov protein [Xeno ( 540) 877 167.5 1.2e-38 gi|194040435|ref|XP_001927703.1| PREDICTED: simila ( 179) 839 160.2 6.4e-37 gi|149043520|gb|EDL96971.1| ring finger protein 8, ( 126) 834 159.1 9.4e-37 gi|149269142|ref|XP_001479559.1| PREDICTED: simila ( 202) 786 150.8 4.8e-34 gi|195539833|gb|AAI68076.1| Unknown (protein for M ( 342) 787 151.2 6.1e-34 gi|210094783|gb|EEA42958.1| hypothetical protein B ( 584) 774 149.2 4.3e-33 gi|41351026|gb|AAH65643.1| Zgc:55936 [Danio rerio] ( 531) 769 148.2 7.5e-33 gi|27882568|gb|AAH44545.1| Zgc:55936 [Danio rerio] ( 485) 758 146.2 2.8e-32 gi|162329958|pdb|2PIE|A Chain A, Crystal Structure ( 138) 738 142.1 1.4e-31 gi|223648922|gb|ACN11219.1| E3 ubiquitin-protein l ( 475) 744 143.7 1.5e-31 gi|148690679|gb|EDL22626.1| ring finger protein 8 ( 146) 715 138.0 2.5e-30 gi|159163929|pdb|2CSW|A Chain A, Solution Structur ( 145) 713 137.6 3.2e-30 >>gi|73972753|ref|XP_864751.1| PREDICTED: similar to CG6 (880 aa) initn: 3774 init1: 2755 opt: 3712 Z-score: 3577.4 bits: 672.9 E(): 1.5e-190 Smith-Waterman score: 3712; 78.779% identity (89.182% similar) in 721 aa overlap (31-743:1-720) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL : :: ::.:. :. : ::::: :. ::: gi|739 MEEPGSLVTGDRAGGRRWCLRRARMNAEWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :: :.:::::::..:::::.::.:::::::.::::::: :::::::::::::::::::: gi|739 LLEDGNEVTIGRGFGVTYQLVSKICPLMISRNHCVLKQNVEGQWTIMDNKSLNGVWLNRE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :: ::. : :.::::::::::::..:.::::::: ::::: . ::::::::: . :..: gi|739 RLEPLKVYSIHKGDHIQLGVPLENKENAEYEYEVTEEDWERMYPCLAPKNDQIIGKNRGL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL ::::::: ::. ::: : :. ...:. :: .: : ::::...:: : : :::: gi|739 RTKRKFSLDELEGPGAEGPSHLKSKISKVSYKPGQPVKSHGKGEVASQPSEYLDPKLTSL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ . ::.:. :. . ::. : ::::: :::::.:::::::::::.::::::::::: gi|739 ELSEKATDAHVYPSSTKVVALH-HKKQKASSPSASQSSLELFKVTMSRILKLKTQMQEKQ 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL .:::::::::.::.:::::.:::::..::::: :::::::::::::::::::: ..:::: gi|739 VAVLNVKRQTQKGNSKKIVKMEKELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE ::.::: ::::::.::::::.::::::: :::::: ::::::::::::::::.:.::::: gi|739 EKDQGEEDLKQQLAQALQEHRALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR :::::.::.::::::::::::::::::::::::::::.:::::::::::::::::::.:. gi|739 EVLSHVNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKSK 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF :.::::::::.::::::::.::.:: ::::::.::::::::::::::::: ::.: ::: gi|739 THSLVLDNCINKMVDNLSSEVKDRRIVLIRERKASATSLSGSDSETEGKQHSSDSFDDAF 450 460 470 480 490 500 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT :::::::::::::::::::::.:::::::.:::::::::::::::::.:::::::::::: gi|739 KADSLVEGTSSRYSMYNSVSQKLMAKMGFKEGEGLGKYSQGRKDIVEASNQKGRRGLGLT 510 520 530 540 550 560 610 620 630 640 650 660 mKIAA0 LQGFDQELNVDWRDEPEPNACEQVSWFPECTTEIPDSREMSDWMVVGKRKMVIEDETEFC ::::::::::::::::::.:::::::::::::::::..:::::::.:::::::::::::: gi|739 LQGFDQELNVDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVMGKRKMVIEDETEFC 570 580 590 600 610 620 670 680 690 700 710 720 mKIAA0 GEELLHSMLKCKSVFDILDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMF :::::::.:.::::::.::::::::::::::::::::::::::::::::::::::::.:: gi|739 GEELLHSVLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDHMF 630 640 650 660 670 680 730 740 mKIAA0 TNPLDSSGA-----REASP---STCCGGRSGTQRALG ::: :: : ::: . :.: .: gi|739 TNPRDSCGKPLVKDREAELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLE 690 700 710 720 730 740 gi|739 DFYSASSELFEPYYGRDMKEEDGDITRPENITAFRNFVLDNTDRKGVHFLMADGGFSVEG 750 760 770 780 790 800 >>gi|73972755|ref|XP_538896.2| PREDICTED: similar to CG6 (1090 aa) initn: 3774 init1: 2755 opt: 3712 Z-score: 3576.3 bits: 673.0 E(): 1.7e-190 Smith-Waterman score: 3712; 78.779% identity (89.182% similar) in 721 aa overlap (31-743:1-720) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL : :: ::.:. :. : ::::: :. ::: gi|739 MEEPGSLVTGDRAGGRRWCLRRARMNAEWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :: :.:::::::..:::::.::.:::::::.::::::: :::::::::::::::::::: gi|739 LLEDGNEVTIGRGFGVTYQLVSKICPLMISRNHCVLKQNVEGQWTIMDNKSLNGVWLNRE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :: ::. : :.::::::::::::..:.::::::: ::::: . ::::::::: . :..: gi|739 RLEPLKVYSIHKGDHIQLGVPLENKENAEYEYEVTEEDWERMYPCLAPKNDQIIGKNRGL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL ::::::: ::. ::: : :. ...:. :: .: : ::::...:: : : :::: gi|739 RTKRKFSLDELEGPGAEGPSHLKSKISKVSYKPGQPVKSHGKGEVASQPSEYLDPKLTSL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ . ::.:. :. . ::. : ::::: :::::.:::::::::::.::::::::::: gi|739 ELSEKATDAHVYPSSTKVVALH-HKKQKASSPSASQSSLELFKVTMSRILKLKTQMQEKQ 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL .:::::::::.::.:::::.:::::..::::: :::::::::::::::::::: ..:::: gi|739 VAVLNVKRQTQKGNSKKIVKMEKELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE ::.::: ::::::.::::::.::::::: :::::: ::::::::::::::::.:.::::: gi|739 EKDQGEEDLKQQLAQALQEHRALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR :::::.::.::::::::::::::::::::::::::::.:::::::::::::::::::.:. gi|739 EVLSHVNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKSK 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF :.::::::::.::::::::.::.:: ::::::.::::::::::::::::: ::.: ::: gi|739 THSLVLDNCINKMVDNLSSEVKDRRIVLIRERKASATSLSGSDSETEGKQHSSDSFDDAF 450 460 470 480 490 500 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT :::::::::::::::::::::.:::::::.:::::::::::::::::.:::::::::::: gi|739 KADSLVEGTSSRYSMYNSVSQKLMAKMGFKEGEGLGKYSQGRKDIVEASNQKGRRGLGLT 510 520 530 540 550 560 610 620 630 640 650 660 mKIAA0 LQGFDQELNVDWRDEPEPNACEQVSWFPECTTEIPDSREMSDWMVVGKRKMVIEDETEFC ::::::::::::::::::.:::::::::::::::::..:::::::.:::::::::::::: gi|739 LQGFDQELNVDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVMGKRKMVIEDETEFC 570 580 590 600 610 620 670 680 690 700 710 720 mKIAA0 GEELLHSMLKCKSVFDILDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMF :::::::.:.::::::.::::::::::::::::::::::::::::::::::::::::.:: gi|739 GEELLHSVLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDHMF 630 640 650 660 670 680 730 740 mKIAA0 TNPLDSSGA-----REASP---STCCGGRSGTQRALG ::: :: : ::: . :.: .: gi|739 TNPRDSCGKPLVKDREAELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLE 690 700 710 720 730 740 gi|739 DFYSASSELFEPYYGEGGIDGDGDITRPENITAFRNFVLDNTDRKGVHFLMADGGFSVEG 750 760 770 780 790 800 >>gi|109070995|ref|XP_001117035.1| PREDICTED: similar to (1272 aa) initn: 3643 init1: 2686 opt: 3586 Z-score: 3454.2 bits: 650.6 E(): 1.1e-183 Smith-Waterman score: 3586; 75.867% identity (87.656% similar) in 721 aa overlap (31-743:1-719) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL :::: .:.:. : :::::::.::. :: gi|109 MGEPGFFVTGDRARGRSWCLRRVGMSAGWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :: : :::.:::..:::::.::.:::::::.::::::::::::::::::::::::::: gi|109 LLEDGREVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRA 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :: ::. : :..::.::::::::..:.::::::: :::::.. :::.::::: .::.: gi|109 RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEEDWETIYPCLSPKNDQMIEKNKEL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL ::::::: : . ::: :.:. . .:. . . : .:::...: : : ::.: gi|109 RTKRKFSLDQLGGPGAEGPSNLKSKINKVSCESSQSVKSQGKGEVASTPSENLDPKLTAL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ . : ...: ..: : :. ..::: :::: ::..:::::::.:.:: :::::. gi|109 EPSTKTTGAPIYPGFPIVTEVH--HEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKH 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL ::.:::.::.::.::::::::.::..::::: :::::::::::::::::::: ..:::: gi|109 EAVMNVKKQTQKGNSKKIVRMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE : ::: ::::::.:::::: ::::::: :::::: ::::::::::::::::.::::::: gi|109 EIAQGEEDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR ::::::::.::::::::::::::::::::::::::::.:::::::::.:::::::::::. gi|109 EVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIESK 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF : ::::::::.:::.::::.::::: ::::::.::.:::::::::::::: ::.: ::: gi|109 TYSLVLDNCINKMVNNLSSEVKERRIVLIRERKASTTSLSGSDSETEGKQHSSDSFDDAF 450 460 470 480 490 500 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT :::::::::::::::::::::.:::::::::::::::::::::::::.:.:::::::::: gi|109 KADSLVEGTSSRYSMYNSVSQKLMAKMGFREGEGLGKYSQGRKDIVEASSQKGRRGLGLT 510 520 530 540 550 560 610 620 630 640 650 660 mKIAA0 LQGFDQELNVDWRDEPEPNACEQVSWFPECTTEIPDSREMSDWMVVGKRKMVIEDETEFC :.::::::::::::::::.:::::::::::::::::..:::::::::::::.:::::::: gi|109 LRGFDQELNVDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVVGKRKMIIEDETEFC 570 580 590 600 610 620 670 680 690 700 710 720 mKIAA0 GEELLHSMLKCKSVFDILDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMF :::::::.:.::::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 GEELLHSVLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMF 630 640 650 660 670 680 730 740 mKIAA0 TNPLDSSGA-----REASP---STCCGGRSGTQRALG ::: :: : ::: . :.: .: gi|109 TNPRDSYGKPLVKDREAELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLE 690 700 710 720 730 740 gi|109 DFYSASSELFEPYYGEGGIDGDGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEG 750 760 770 780 790 800 >>gi|21362895|sp|Q8VC56.1|RNF8_MOUSE RecName: Full=E3 ub (488 aa) initn: 3340 init1: 3243 opt: 3243 Z-score: 3128.9 bits: 589.0 E(): 1.4e-165 Smith-Waterman score: 3243; 99.385% identity (99.590% similar) in 488 aa overlap (31-518:1-488) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL :::::::::::::::::::::::::::::: gi|213 MGEPDPLVSGQLAARRSWCLRRLGMDCEWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF ::::::::::::::::::::::::::::::::::. : gi|213 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRAKRLS 460 470 480 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT >>gi|68534363|gb|AAH99079.1| Ring finger protein 8 [Ratt (487 aa) initn: 1540 init1: 1518 opt: 2911 Z-score: 2809.2 bits: 529.8 E(): 9.1e-148 Smith-Waterman score: 2911; 90.289% identity (96.281% similar) in 484 aa overlap (31-514:1-483) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL :::::::::::::::::::::::::: ::: gi|685 MGEPDPLVSGQLAARRSWCLRRLGMDREWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :::::.:::::::.:::::::::::::::::.:::::::::::::::::::::::::::: gi|685 QLEAGSEVTIGRGFSVTYQLISKVCPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS ::::::::::::::::::::::::.: ::::::::::: ::::::::::::. ::::: gi|685 RLAPLQGYCIRKGDHIQLGVPLESKEHAEYEYEVIEEDRESLAPCLAPKNDHTTEKHKGL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL :::::::: :.:.::::: ::::::::. .::: :::::::::.:.:: :::::: :.:: gi|685 RTKRKFSSDGVESLPAEGPSDLRCPLAKGSSKPAEPEKLHGKGEAASQPLGCLCPTLASL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ .::::.:::::::.::::::: ::::::: :::::.::::::.:::::::::::::::: gi|685 EASERTAGPHACSTLPKVLELY-PKKQKACSPSASQSSLELFKMTMSRMLKLKTQMQEKQ 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL :::::::::.:::::::.::::::::.:::::::::::::::::::::::::: ..:::: gi|685 IAVLNVKRQARKGSSKKVVRMEKELRDLQSQLYAEQAQQQARVEQLEKTFQEEEQHLQGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE :::::::::::::.::::::.::::::. :::::::::::::::::.::::::::::::: gi|685 EKEQGECDLKQQLLQALQEHRALMEELDRSKKDFEKIIQAKNKELERTKEEKDKVQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR ::::::::.:::::::::::::::::::::::::::::::.::::::::::::::::::: gi|685 EVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSFCISEWMKRKVECPICRKDIESR 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF ::::::::::::::. :::::::::::::::::: gi|685 TNSLVLDNCISKMVERLSSDVKERRSVLIRERRAKRLL 450 460 470 480 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT >>gi|73972751|ref|XP_864730.1| PREDICTED: similar to Ubi (487 aa) initn: 2436 init1: 1411 opt: 2367 Z-score: 2285.3 bits: 432.9 E(): 1.4e-118 Smith-Waterman score: 2367; 75.000% identity (87.500% similar) in 488 aa overlap (31-518:1-487) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL : :: ::.:. :. : ::::: :. ::: gi|739 MEEPGSLVTGDRAGGRRWCLRRARMNAEWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :: :.:::::::..:::::.::.:::::::.::::::: :::::::::::::::::::: gi|739 LLEDGNEVTIGRGFGVTYQLVSKICPLMISRNHCVLKQNVEGQWTIMDNKSLNGVWLNRE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :: ::. : :.::::::::::::..:.::::::: ::::: . ::::::::: . :..: gi|739 RLEPLKVYSIHKGDHIQLGVPLENKENAEYEYEVTEEDWERMYPCLAPKNDQIIGKNRGL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL ::::::: ::. ::: : :. ...:. :: .: : ::::...:: : : :::: gi|739 RTKRKFSLDELEGPGAEGPSHLKSKISKVSYKPGQPVKSHGKGEVASQPSEYLDPKLTSL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ . ::.:. :. . ::. : ::::: :::::.:::::::::::.::::::::::: gi|739 ELSEKATDAHVYPSSTKVVALH-HKKQKASSPSASQSSLELFKVTMSRILKLKTQMQEKQ 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL .:::::::::.::.:::::.:::::..::::: :::::::::::::::::::: ..:::: gi|739 VAVLNVKRQTQKGNSKKIVKMEKELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE ::.::: ::::::.::::::.::::::: :::::: ::::::::::::::::.:.::::: gi|739 EKDQGEEDLKQQLAQALQEHRALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR :::::.::.::::::::::::::::::::::::::::.:::::::::::::::::::.:. gi|739 EVLSHVNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKSK 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF :.::::::::.::::::::.::.:: ::::::.:. : gi|739 THSLVLDNCINKMVDNLSSEVKDRRIVLIRERKAKRLS 450 460 470 480 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT >>gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN RecName: Full=E3 u (487 aa) initn: 2401 init1: 1357 opt: 2308 Z-score: 2228.5 bits: 422.4 E(): 2e-115 Smith-Waterman score: 2308; 72.671% identity (87.992% similar) in 483 aa overlap (31-513:1-482) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL ::.: ::. :..:::::::.::. ::: gi|119 MGDPGSLVTEGRAGERSWCLRRVGMNTEWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :: :.:::.:::..:::::.::.:::::::.::.:::: :::::: ::::::::::::: gi|119 LLEDGNEVTVGRGFGVTYQLVSKICPLMISRNHCILKQNAEGQWTIKDNKSLNGVWLNRE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :: ::. : :.::::::::::::..:.::::::: ::::: . :::.::.:: :::.:: gi|119 RLEPLKVYSIHKGDHIQLGVPLENKENAEYEYEVTEEDWERIYPCLSPKSDQMMEKNKGL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL ::::::: ::. ::: :.:. ..... .: . : :::: ..:: : : :::. gi|119 RTKRKFSLDELEGSGAEGPSNLKSKISKLSCEPGQQVKSHGKGKVASQPSEYLDPKLTSF 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ . : ...: :. . ::.:: ::.:: :::::.:::::::::::.: ::::::::: gi|119 EPSVKTTGAHVNPGPAKVIEL-LRKKKKASNPSASQSSLELFKVTMSRILMLKTQMQEKQ 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL .::::::.::.::::::::.::.::..::::: ::::::::::::::::.::: ..:.:: gi|119 VAVLNVKKQTKKGSSKKIVKMEQELQDLQSQLCAEQAQQQARVEQLEKTIQEEQQHLEGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE :::.:: ::::::.:::::...:.:::: :::.:: :::::.::::::::::.::::::: gi|119 EKEEGEEDLKQQLAQALQEYRSLVEELNRSKKNFEAIIQAKDKELEQTKEEKEKVQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR ::::::::.::::::::::::::.:::::::::::::.:::::::::::::::::::.:. gi|119 EVLSHMNDVLENELQCIICSEYFVEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKSK 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF : :::::::::::::::.:.::::: ::::::. gi|119 TRSLVLDNCISKMVDNLNSEVKERRIVLIRERKGKRLF 450 460 470 480 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT >>gi|194040433|ref|XP_001927699.1| PREDICTED: similar to (512 aa) initn: 2242 init1: 1407 opt: 2290 Z-score: 2210.9 bits: 419.2 E(): 1.9e-114 Smith-Waterman score: 2290; 74.059% identity (87.657% similar) in 478 aa overlap (37-514:34-508) 10 20 30 40 50 60 mKIAA0 TSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWLQLEAGT ::.: :. :::::::.::. ::. :: gi|194 YDPEPKVSFSQILLAVITTQGRVGYGGARLLVTGGRAGDRSWCLRRVGMNAEWVLLE--E 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 EVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRERLAPLQ :::.:::..:::::.::.:::::::.::::::: :::::: ::::::::::::::: ::. gi|194 EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNAEGQWTITDNKSLNGVWLNRERLEPLK 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 GYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGSRTKRKF : :..:::::::::::..:.::::::: :.::: . :::. :.:: :::.:: :::::: gi|194 VYSIHEGDHIQLGVPLENKENAEYEYEVTEDDWERVYPCLSLKSDQMMEKNKGLRTKRKF 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 SSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSLKASERA . ::. ::: : :. ...:. .: .: : : :: ...: : : :: :. : .: gi|194 NLDELEGSGAEGPSTLKSKISKVSCEPGQPVKSHEKGKVAGQLNEYLDPKLTCLQPSGKA 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA0 AGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQIAVLNV : :. . ::.::. .:::: :::::.:::::::::::.::::::::::::::::: gi|194 LGAHVYPVPAKVVELQ-HRKQKASNPSASQSSLELFKVTMSRILKLKTQMQEKQIAVLNV 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA0 KRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGLEKEQGE :.::.::.:::::.::.::..::::: :::::::::::::::::::: ..:::::::::: gi|194 KKQTQKGNSKKIVKMEQELHDLQSQLCAEQAQQQARVEQLEKTFQEEQQHLQGLEKEQGE 310 320 330 340 350 360 370 380 390 400 410 420 mKIAA0 CDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKEEVLSHM ::::::.::::::.::::::: :.:::: ::::::::::::::::.::::::::::::: gi|194 EDLKQQLAQALQEHRALMEELNRSRKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHM 370 380 390 400 410 420 430 440 450 460 470 480 mKIAA0 NDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESRTNSLVL ::.::::::::::::::::::::::::::::.:::::::::::::::::::.:.:.:::: gi|194 NDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKSKTHSLVL 430 440 450 460 470 480 490 500 510 520 530 540 mKIAA0 DNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAFKADSLV ::::.::::::::.::::: :::.::.: gi|194 DNCINKMVDNLSSEVKERRVVLIKERKAKRLF 490 500 510 >>gi|90075162|dbj|BAE87261.1| unnamed protein product [M (486 aa) initn: 2303 init1: 1344 opt: 2245 Z-score: 2167.9 bits: 411.2 E(): 4.8e-112 Smith-Waterman score: 2245; 71.281% identity (85.744% similar) in 484 aa overlap (31-514:1-482) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL :::: .:.:. : :::::::.::. :: gi|900 MGEPGFFVTGDRARGRSWCLRRVGMSAGWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :: : :::.:::..:::::.::.:::::::.::::::::::::::::::::::::::: gi|900 LLEDGREVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRA 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :: ::. : :..::.::::::::..:.::::::: :::::.. :::.::::: .::.: gi|900 RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEEDWETIYPCLSPKNDQMIEKNKEL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL ::::::: : . ::: :.:. . .:. . . : .:::...: : : ::.: gi|900 RTKRKFSLDQLGGPGAEGPSNLKSKINKVSCESSQSVKSQGKGEVASTPSENLDPKLTAL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ . :....: ..: : :. ..::: :::: ::..:::::::.:.:: :::::. gi|900 EPSKKTTGAPIYPGFPIVTEVH--HEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKH 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL ::.:::.::.::.::::::::.::..::::: :::::::::::::::::::: ..:::: gi|900 EAVMNVKKQTQKGNSKKIVRMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE : ::: ::::::.:::::: ::::::: :::::: ::::::::::::::::.::::::: gi|900 EIAQGEEDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR ::::::::.::::::::::::::::::::::::::::.:::::::::.:::::::::::. gi|900 EVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIESK 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF : ::::::::.:::.::::.::::: ::::::.: gi|900 TYSLVLDNCINKMVNNLSSEVKERRIVLIRERKAKRLF 450 460 470 480 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT >>gi|21362894|sp|O76064.1|RNF8_HUMAN RecName: Full=E3 ub (485 aa) initn: 2278 init1: 1328 opt: 2242 Z-score: 2165.0 bits: 410.6 E(): 7e-112 Smith-Waterman score: 2242; 70.868% identity (86.364% similar) in 484 aa overlap (31-514:1-481) 10 20 30 40 50 60 mKIAA0 LSCARGTSEAAGAQARGWLVAERCPSADRAMGEPDPLVSGQLAARRSWCLRRLGMDCEWL :::: .:.:. :. :::::::.::. :: gi|213 MGEPGFFVTGDRAGGRSWCLRRVGMSAGWL 10 20 30 70 80 90 100 110 120 mKIAA0 QLEAGTEVTIGRGLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNGVWLNRE :: : :::.:::..:::::.::.:::::::.::::::::::::::::::::::::::: gi|213 LLEDGCEVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRA 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 RLAPLQGYCIRKGDHIQLGVPLESRETAEYEYEVIEEDWESLAPCLAPKNDQRMEKHKGS :: ::. : :..::.::::::::..:.::::::: :::::.. :::.::::: .::.: gi|213 RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEEDWETIYPCLSPKNDQMIEKNKEL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RTKRKFSSPGLENLPAEGSSDLRCPLANVASKPIEPEKLHGKGDASSQSLGCLCPGLTSL ::::::: : . ::: :.:. . .:. . .: : .:::...: : : ::.: gi|213 RTKRKFSLDELAGPGAEGPSNLKSKINKVSCESGQPVKSQGKGEVASTPSDNLDPKLTAL 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 KASERAAGPHACSALPKVLELSCPKKQKACRPSASQNSLELFKVTMSRMLKLKTQMQEKQ . :. ...: ..::: :. ..::: :::: ::..:::::::.:.:: :::::. gi|213 EPSKTTGAP-IYPGFPKVTEVH--HEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKH 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 IAVLNVKRQTRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGL ::.:::.::.::.:::.:.::.::..::::: :::::::::::::::::::: ..:::: gi|213 EAVMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 EKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKELEQTKEEKDKVQAQKE : ::: ::::::.:::::: ::::::: :::::: ::::::::::::::::.:.::::: gi|213 EIAQGEKDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKE 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 EVLSHMNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESR ::::::::.::::::::::::::::::::::::::::.:::::::::.:::::::::.:. gi|213 EVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 TNSLVLDNCISKMVDNLSSDVKERRSVLIRERRASATSLSGSDSETEGKQPCSDDFKDAF : ::::::::.:::.::::.::::: ::::::.: gi|213 TYSLVLDNCINKMVNNLSSEVKERRIVLIRERKAKRLF 450 460 470 480 550 560 570 580 590 600 mKIAA0 KADSLVEGTSSRYSMYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLT 749 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 16:46:33 2009 done: Sun Mar 15 16:54:36 2009 Total Scan time: 1065.240 Total Display time: 0.220 Function used was FASTA [version 34.26.5 April 26, 2007]