Comparison of KIAA cDNA sequences between mouse and human (FLJ00179)
<<Original sequence data>>
mouse mFLJ00179 (mpf00882) length: 5935 bp, CDS: 2669 - 3625
human (sj01277) length: 4319 bp, CDS: 2 - 586
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 35 - 35 1 0 0.0
CDS: 36 - 1113 321 283 46.9
3'UTR: 1114 - 6263 2186 1318 37.6
amino acid
CDS: 36 - 1113 39 156 80.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
P A A S G
mpf00882 1 ATTCTCCGAGCAGCGCCGAGCTGCGTCGGGCTCAGCCGGCTGCGTCCGGA 50
| | || | || |
sj01277 1 ..................................GGGTGGTGGGACCAGC 16
G G G T S
51 ----+----*----+----*----+----*----+----*----+----* 100
G A G D G A
mpf00882 51 GGTGCGGGCGACGGCGCCGCTGTGCTCCAGCGGTGCTAACCGAGGCAGAA 100
||| |||| | || ||
sj01277 17 AGTGGGGGCAGCAGCACC................................ 34
S G G S S T
101 ----+----*----+----*----+----*----+----*----+----* 150
A I R P G R K A P E T R A
mpf00882 101 GCCATCCGGCCGGGTCGGAAGGCGCCTGAGACTCGGGCAGGGCAGGAGCG 150
| || | | || | | || || ||||| |
sj01277 35 AACTCCCTGACTGGGTCCCGGCCCCCCAAGGCTCGGCC............ 72
N S L T G S R P P K A R P
151 ----+----*----+----*----+----*----+----*----+----* 200
V G P R T E R E A D R H T F P A
mpf00882 151 GCGTAGGTCCCAGGACTGAGCGGGAGGCGGACCGGCACACGTTCCCGGCC 200
| || ||| | | || | | ||| | || | || | ||
sj01277 73 .CACTATTCTCAGCTCAGGGCTGCCAGAGGAACCCGACCAGAACCTGTCC 121
T I L S S G L P E E P D Q N L S
201 ----+----*----+----*----+----*----+----*----+----* 250
R P A E P G R S
mpf00882 201 CGGCAGAGCCTCCCGAAGCGGTCCCTGCAGAGCCGGGTCGGTCGCCGAGG 250
| ||||| ||| | | |
sj01277 122 AG....................CCCTGAGGAGGTGTTCCACT........ 143
S P E E V F H S
251 ----+----*----+----*----+----*----+----*----+----* 300
S A S R G L T C A G Q
mpf00882 251 TGGCTTCCGCTTCCCGGGGCCTCACCTGCGCAGGCCGCGGTGCGCCAGGT 300
|| | ||||| | || || || |||
sj01277 144 ...CTGGCCACTCCCGCAACTCCAGCTATGCCAGCC.............. 176
G H S R N S S Y A S Q
301 ----+----*----+----*----+----*----+----*----+----* 350
A C A S P G H L P R H
mpf00882 301 GCGGAGGCGTGTGCGTCGCCTGGGCACCTCCCACGGCAGCCAGCGGGGCG 350
|| || | | || || | || |||
sj01277 177 ....AGCAGTCCAAGATCTCCGGCTACAGCACAGAGCA............ 210
Q S K I S G Y S T E H
351 ----+----*----+----*----+----*----+----*----+----* 400
G A A A R V S S G S P G R
mpf00882 351 GAGGCGGGGCCGCCGCCCGGGTCTCCAGCGGTTCGCCCGGCCGTCTCCGT 400
| | | || || | |||| | ||| | ||||
sj01277 211 ....CTCGCGCTCCTCCAGCCTCTCAGACCTGACGCACCGCCG....... 249
S R S S S L S D L T H R R
401 ----+----*----+----*----+----*----+----*----+----* 450
H R S A G P R G S G C
mpf00882 401 CAGTCTCACCGGTCCGCCGGGCCCCGCGGATCGGGATGCTGCTGCTCGCT 450
|| |||| || | | ||| || || ||
sj01277 250 .....CAACACGTCCACCAGCAGCAGCGCCTCTGGGGGC........... 283
N T S T S S S A S G G
451 ----+----*----+----*----+----*----+----*----+----* 500
V
mpf00882 451 TGCGAGCCGCCCTCCACGCCAGCCCCCGCTGCCGGGGCCGCACCTCGCTG 500
sj01277 284 .................................................C 284
L
501 ----+----*----+----*----+----*----+----*----+----* 550
Y M S V E P R G * E Q P A H
mpf00882 501 TTTACATGTCAGTGGAGCCCGGGTTCCCCGAGGGTGAGAGCAGCCGGCTC 550
|| |||| | |||||| || | | | ||| || |
sj01277 285 TTGGCATGACCGTGGAG........GGCCCTGAGGGCAGTGAGCGGGAGC 326
G M T V E G P E G S E R E H
551 ----+----*----+----*----+----*----+----*----+----* 600
W T W A Q P P P
mpf00882 551 ACTGGACCTGGGGCTCCGAACTCAGATCCTCTCCTGCCCGCAGCCTCCGC 600
|| || || || | |||| ||||
sj01277 327 ACCGGCCCCCGG..........................AGAAGCCGCCGC 350
R P P E K P P R
601 ----+----*----+----*----+----*----+----*----+----* 650
P S
mpf00882 601 CGCCATCTGGACTGGATCCAGCTCTGGTGTTTTTGAGGAGGGGGGTGTGG 650
|||| |
sj01277 351 GGCCACC........................................... 357
P P
651 ----+----*----+----*----+----*----+----*----+----* 700
mpf00882 651 TGTCGGGAAAGGAATCCTGGGGTTTTCTAGTATCCCCTTCTTTTTTTCTT 700
sj01277 358 .................................................. 358
701 ----+----*----+----*----+----*----+----*----+----* 750
G L Q T Q G T
mpf00882 701 TTTTCTTTTCTTTTTCTTTTTGGCCCTGCGGGCTTCAGACTCAGGGAACT 750
| ||| | | || | |
sj01277 358 ............................CCGGCCCCTGCATCTGTCCGAT 379
R P L H L S D
751 ----+----*----+----*----+----*----+----*----+----* 800
C S L M K K K K S
mpf00882 751 TGCTCATGGCTTTTTTGATGAAGAAGAAGAAATTTAAATTTCAAACCACT 800
|||| ||| | | ||||||| | |
sj01277 380 CGCTC........TTTCAGGCGGAAGAAGGACT................. 404
R S F R R K K D S
801 ----+----*----+----*----+----*----+----*----+----* 850
A V P F V N G V
mpf00882 801 TTCACCTTGGAGGAGCTGACTGCGGTCCCCTTCGTGAACGGGGTCCTCTT 850
| | || | | || | ||||
sj01277 405 ...................CGGTGGAGAGCCACCCGACCTGGGT...... 429
V E S H P T W V
851 ----+----*----+----*----+----*----+----*----+----* 900
K V R L L D G G D F V
mpf00882 851 TTGCAAGGTCCGGCTGCTGGATGGCGGGGATTTTGTCAGCTTGTCGTCCA 900
| | | || | | |||| | | | ||
sj01277 430 ...GGACGACACGCGGATCGATGCGGATGCCATCGT.............. 462
D D T R I D A D A I V
901 ----+----*----+----*----+----*----+----*----+----* 950
E E V Q E R K R F T F
mpf00882 901 GGGAGGAGGTGCAGGAGAACTGTGTACGATGGCGGAAGAGGTTCACCTTT 950
|||| || | | ||| | || ||||| |
sj01277 463 .GGAGAAGATCGTGCAGA...............GCCAGGACTTCACAGAT 496
E K I V Q S Q D F T D
951 ----+----*----+----*----+----*----+----*----+----* 1000
V C K M D P C I
mpf00882 951 GTGTGTAAAATGAGTGCCAACCCGGCCACAGGCCTGCTGGACCCCTGCAT 1000
| | || | || | |||
sj01277 497 GGCAGCAACA...........................CCGAGGACAGCAA 519
G S N T E D S N
1001 ----+----*----+----*----+----*----+----*----+----* 1050
F R V S V R G K A Y S K
mpf00882 1001 CTTTCGAGTGTCTGTGCGCAAGGAGCTGAAAGGTGGGAAGGCGTATTCCA 1050
| | || ||| ||| || | | | | | |||
sj01277 520 CCTCCGGCTGTTCGTGAGC...............CGCGATGGCTCTGCCA 554
L R L F V S R D G S A T
1051 ----+----*----+----*----+----*----+----*----+----* 1100
V R G T * D
mpf00882 1051 AGGTAAGAGGGACATGTGGGAGCCTTGCTTCTCCCGTCCTTTTCCTAGGA 1100
| | || || | | ||
sj01277 555 CGCTGAGCGGCA...............................TCCAGCT 573
L S G I Q L
1101 ----+----*----+----*----+----*----+----*----+----* 1150
P T S Q
mpf00882 1101 TCCCACTAGTCAGGCTGGGGATTGGGTAAGAGCTTAGCAAGACCACCCAG 1150
| |||| || ||| || | ||
sj01277 574 TGCCACCAGGTAGGGCAGGCTTAGG......................... 598
A T R *
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mpf00882 1151 CCCCTGCTCCCGAAGGGTCGAAGGGGTGTGCGACCACACCCAGCTTCTGT 1200
|| |||||| |||| |
sj01277 599 ...........GAGGGGTCGTCGGGGCG...................... 615
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mpf00882 1201 ACTTTGTATGTTTTGCTGGGGATTGAACCCAGGGCCTTGCAATGCTAGGC 1250
||||||| ||| | || ||
sj01277 616 ..............GCTGGGGCTTG.............GGGGTGAGAGCA 638
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mpf00882 1251 AAGTCCTCTACCATTGCTTCTGGTTTTCTAAGGAAAAAAGAAACACACAT 1300
||||| |
sj01277 639 GAGTCCCC.......................................... 646
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mpf00882 1301 CCAAAACTGAATGAAATGGGCACAGACTTGGAGAAAAGGAAGGCGAGTGC 1350
sj01277 647 .................................................. 647
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpf00882 1351 TGTGCGCATGCGCGTCTAAGCAGCAGTTGTTCACAATGCTGTGCAGATGC 1400
| || || |
sj01277 647 .....................................ACAGTCCACTCAC 659
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mpf00882 1401 CGCAGCTTGAGCGCCTTA.CTTACCTACCCAGTGTATCCTGAGCGGCTTT 1449
| ||||| |||| | ||| | | |||||| || | |
sj01277 660 CTGGCCTTGAACGCCAAATCTTGTCGCCACAGTGTGACCCTGGGCCTGTC 709
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mpf00882 1450 CTGTATTCTTTCTAATGGCAGCAGCGGCTCGCTGTGTGCTGGTGAGACAG 1499
||| | | |
sj01277 710 ATGTCT.........................................CTG 718
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mpf00882 1500 AGTCAGCCCTTCACTGCTGTTGTAGAGCTGTGTTGACCCCAGGTCTTCCT 1549
| | || ||| | | ||| ||||||| ||
sj01277 719 AACCTCCCTTTCCC..CATCTGTCAGGCTGTGTGGA.............. 752
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mpf00882 1550 TAGTGCCGTCTTCCACCGCCACCTCCTCCCCTGGCTTCAGGCCTACAGTT 1599
| ||||| |||| ||||| |
sj01277 753 ................CACCACCACCTCACCTGGGAGC............ 774
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mpf00882 1600 AGAAGCTTCTCTGTGGGAACAAGTGGGAGAAGAGGGCCTGGCTTTGAGTG 1649
||| || | || | | | ||| || |||
sj01277 775 ..........CTGGGGCAGTGAGGGCACGGACAGG........TTCGGTG 806
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mpf00882 1650 AGCCCGTTCTGTCCTCTGTCTCTGCTCTCTGGGGTACTCTTGGTCAGCCC 1699
| | || | | || ||| || || || |
sj01277 807 GTTTCCCACAGTTCACAAGGTCACCTCCAGCAATGCCTGGTGCAGGGCTC 856
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mpf00882 1700 AGCACAGGTGGGGCTGTACCTCTCACCCCGTGGGGGACCTGAGATAGGGG 1749
|||||| |
sj01277 857 AGCACATG.......................................... 864
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mpf00882 1750 AGCACGGGCTCAGACATCCCCACTGCTGGAGTTCCAGAAGCCCACAGCTT 1799
||| |||| | | | | || | || |||
sj01277 865 .GCAGGGGC...........CTCACACGCATTTATTTAGAACCCTCCCTT 902
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mpf00882 1800 CTCATGTCTGCCTGGCCCAGGACTGGAGGGGCTGTCGGAGGGCAGGTGTC 1849
|| | || || | ||||| || | | | | | || |
sj01277 903 CTACTTCCTCCCAGCTCCAGGGACTCGGGAAGAATGGTGGTGGTGATGCC 952
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mpf00882 1850 TCTTGTTTACTCATGAGTAAGGACTGCAGTGTTATAGCCAAGGAGCCCCC 1899
|| || | | | || | | || ||| || | |
sj01277 953 TCATGGGTTTACTGAACAAATCTTTCC....CTAGCACCAGCTAGGCACT 998
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mpf00882 1900 AGGCCACATCAGATGCTGCCAGACCTTTCCCTGCTGTTCCACAGCAGAAC 1949
||||| | || | ||| | || |||
sj01277 999 AGGCCCTAAGTGAAG................GCCTGGTTCAATGCA.... 1028
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mpf00882 1950 CTCACCATGGATTTATCCCACTATGCAGACAAGGAAGCCAGTATACTCAG 1999
|| | || || ||| || || | |||
sj01277 1029 ........GGCTGCTGCCTACACAGCATCCACAGATGGCAG......... 1061
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mpf00882 2000 AAGGACTAAACTGTAAAATGGTGTCCCTCTGAGTCATCACAGGGGCTTGA 2049
|| | | || | || || | | || | ||
sj01277 1062 ..GGGTAGATGGGACCAAAGTTGCGGGAACGACAGTTTATAGAGTGCTGC 1109
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mpf00882 2050 ATCCAAACCCACTTTTCTGACCCTGAAGGCCGTACCCCTAAAACACGGGA 2099
|| | | || || | || | | | ||| | |
sj01277 1110 GTCACAGACATTCATTTGGAGCATGTTGACTATGTGCCTGGCTCTC.... 1155
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mpf00882 2100 GTGGAGATTTGTGTGTTACTGGTGCACAGTAAATGTCCAGTTGGCTGGCC 2149
|||| || || | || | ||| ||
sj01277 1156 .......CATGTGCTTTGGCTAACCAAATGAATGAGCGAGTGAGCGAATG 1198
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mpf00882 2150 AACCAGACACTACCTCCCTCTCTCTGTTCAGGTAGATGTGGAGTCCACCC 2199
| | ||| | || | || || || |||| || ||
sj01277 1199 AGCTTCCCACAGGCGGGCT.....GCTGAGGGCAGGTGGGGAGCCCGCCT 1243
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mpf00882 2200 AACTTTCCCATGCTGCTGCCCTTGCCCTGTCTCTGTCTCACGTGCACACG 2249
||| | | ||| |
sj01277 1244 AACATCCACATCC..................................... 1256
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mpf00882 2250 TCCCAGGAGGACCAGACCAGCTCCTGGGTTCATGTCCTTACACTAGCCCT 2299
|| ||| ||
sj01277 1257 .CCAGGGAAGA....................................... 1266
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mpf00882 2300 TCACCCTTCCCTCCACCAGGACTTCATGGTGATCCTGCCCTGCCTGCTCT 2349
| || || | | |||
sj01277 1267 ...............................GGCGTGGCCAGGCCGCTGC 1285
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mpf00882 2350 GTAGTATCTCATCCCCCTACCCTGACACCAAGTTCCCACGGGCCTTCCTT 2399
| | | | || || |
sj01277 1286 GCA....................................GAGGCTACCCT 1299
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mpf00882 2400 CTCTGCCTGCTCTTCTGTCAGCTCCCTACAGCATGGCCTTGTTTCCCTGG 2449
||| ||||||| ||| | || | | || ||||| | | | |
sj01277 1300 CTCAAGCTGCTCTGCTGACTCCTGCTGGC..CACGGCCTGGAATGGCAGC 1347
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mpf00882 2450 GAACAATGTGTCTGTGTCACAGACAACAATGTCCTTTCATCTCAGGCACA 2499
| ||
sj01277 1348 CATCA............................................. 1352
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mpf00882 2500 CTGGCGTAGTGCACCCTGGGACTGCACACAAAGGGTGCTTTGTGCCACAT 2549
||| | | | | || |||| || |
sj01277 1353 ..............CCTCCCAGTAGCCTCCTGGGCTGCTCTGGGGTGGGG 1388
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mpf00882 2550 GTGAGCTTCTTGCTTGCCGCATTGGTGCTGCTGACCCAGGATCCTGTCCT 2599
||||| | || | | ||| | | | |||| |
sj01277 1389 GTGAGGGGGCGGTGAGCAAGAAGGAAACTGAGGGGCTGGCTTCCT....T 1434
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mpf00882 2600 TGGGTCCTGATTATACAACAGTCAGTGGGGCTGTGGTGGGGTGAGCTGCT 2649
|| || | ||| | || |||
sj01277 1435 ATGGGTTTGTAAACACACCCCTCCCTGG...................... 1462
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mpf00882 2650 CTCCCCGCGCTCCCCCTAAGTTAACCCTTCTGGTGCATCTGCTGCCCAGC 2699
|||||| | || | | |||||| | ||
sj01277 1463 ...........CCCCCTCTGAAAA...TGAGGAAGCATCTTGGGGAAAGA 1498
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mpf00882 2700 AGCCATCCTCCCTGCAGCCTCCCACATTTTTTTTCCCCTCCCAGCTGGGC 2749
| ||| || || | || |||| | ||
sj01277 1499 AACCAATCTGGTTGGGAGCGAGATCA...............CAGCAGAGC 1533
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mpf00882 2750 TTCACTGACTTGAACCTAGCCGAGTTTGCAGGCTCAGGCTCCACCGTCCG 2799
| || || | || || || | | | ||||| | | |
sj01277 1534 TACA.TGCTGAGCCCCGAG..........AGTCCCCGACTCCA.GGGCTG 1571
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mpf00882 2800 CTGCTGCCTATTGGAAGGATACGACACCAAGAATACCCGCCAGGACAACT 2849
||| | | ||| | || | ||||| ||
sj01277 1572 GGCCTGGGCTCGGCAGGGAAAGGAG..........CTGACCAGGTTTCCT 1611
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mpf00882 2850 CCATCCTCAAGGTCACCATTGGCATGTTCCTGCTCTCTGGGGACCCCTGT 2899
| | || | | | | | || || || || | || | ||
sj01277 1612 GACTTCCCACTGCCCTCTTGGTCACCCTCA.CATCCCTCTGAGCCTCAGT 1660
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mpf00882 2900 TTCAAGACGCCACCGTCTACCGCCAAATCCATCTCCATCCCGGGCCAGGA 2949
||| || | | ||| | | || || ||
sj01277 1661 TTC...........TTCACCTGTCAAGTGGGGCAGGAT.....GCAGTGA 1694
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mpf00882 2950 CTCCTCCCTGCAGCTGACGTGTAAAGGTGGTGGGACCAGCAGCGGTGGCA 2999
|||| | | | |||| | | ||||| || ||| ||| |
sj01277 1695 CTCCCTGCCGAGGTGACCGTGAGGATGGGGTGGCACAGCCAGATGTGCCC 1744
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mpf00882 3000 GCAGCAGCACCAATTCCCTAACTGGATCCCGGCCCCCCAAGACCCGGCCC 3049
| | || | | | |||||| ||
sj01277 1745 GGAAGGGCTC................TGCAGGCCCCACA........... 1767
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mpf00882 3050 ACCATCCTGGGCTCAGGACTACCAGAGGAGCCAGACCAGAGCCTGTCCAG 3099
||
sj01277 1768 ..........................................GACTCTGA 1775
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mpf00882 3100 TCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAGCTATGCCA 3149
| || | | ||| |||| |||
sj01277 1776 TGCTTACTATCTGTGTCACTGTGG.......................... 1799
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mpf00882 3150 GCCAGCAGTCCAAGCTATCTGGCTACAGTACAGAGCACTCTCGCTCCTCC 3199
|| || | | |||| | ||| | | || | |
sj01277 1800 GCAAGGGACTTACCATCGCTGGGGCACGGTTTTAGCCCCTTTGCAACACA 1849
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mpf00882 3200 AGCCTGTCTGACTTGACACACCGCAGAAATACATCCACCAGCAGCAGCGC 3249
| ||| | || || | |||| || |||| || | | |
sj01277 1850 GGGCTGGTTAACAGTACCTGCTTGTGAAACACCTCCAGAGGC..CTGGTC 1897
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mpf00882 3250 CTCTGGTGGCCTCAGTATGGCTGTAGAGGGTCCTGAGGGCATGGAGAGGG 3299
| ||| | ||||| | ||| || ||| |||
sj01277 1898 CAGTGGAGCGCTCAGGA...............AATGGGGTATCGAGGGGG 1932
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mpf00882 3300 AGCATCGGCCCTCTGAGAAGCCACCTCGGCCTCCTGAGAAGCCCCCACGC 3349
| | | ||| |
sj01277 1933 ACATGCTGACCTGT.................................... 1946
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mpf00882 3350 CCCCCACGCCCCTTGCATCTATCAGATCGCTCTTTTCGGCGAAAGAAAGA 3399
sj01277 1947 .................................................. 1947
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mpf00882 3400 CTCTGTGGAGAGCCACCCAACCTGGGTAGATGACACTCGAATTGATGCAG 3449
sj01277 1947 .................................................. 1947
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mpf00882 3450 ACGACATTGTGGAGAAGATAATGCAGAGCCAGGACTTCACTGATGGCAGC 3499
sj01277 1947 .................................................. 1947
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mpf00882 3500 AACACTGAGGACAGTAACCTTCGGCTGTTCGTGAGCCGTGATGGCTCCAC 3549
sj01277 1947 .................................................. 1947
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mpf00882 3550 CACACTGAGCGGCATTCAGCTGGGCAACAGAGTCTCCTCGGGAGTCTACG 3599
|| | ||| ||||| || || |||||||
sj01277 1947 .................CTCTCACCTGCAGGGTCTCTTCTGGGGTCTACG 1979
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mpf00882 3600 AGCCAGTCGTAATTGAGAGCCACTGAGGGACCCAGGAGTCC.GGCTGAAG 3648
||||||| || ||||| ||||| ||||| |||| |||| ||||| ||
sj01277 1980 AGCCAGTTGTGATTGAAAGCCATTGAGG..AGCAGGTGTCCGGGCTGGAG 2027
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mpf00882 3649 AAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGA.. 3696
||| ||||||| ||||||| |||| || || |||||| |||||
sj01277 2028 AAGAGTCCTGCTTTCTCTGGAGTCCAGACCTGTATCATTCCATGAGGAAC 2077
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mpf00882 3697 ..................TCTGCTCTGCATTGCATCTGTGCCTCCTC... 3725
||||| | ||| |||| |||||||||
sj01277 2078 TTTCCCCTTCAGATCACCTCTGCGCCACATCTCATCCATGCCTCCTCCAT 2127
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mpf00882 3726 TTACTCTAG.CCACACTGGCCCCCAAAGCGTCATTCCATT.TTCCTCCCA 3773
|||| || ||||||| |||| ||| |||||||||| ||||| |
sj01277 2128 GCACTCCAGTCCACACT...CCCCGTAGCATCATTCCATTGCCCCTCCTA 2174
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mpf00882 3774 TCCACCCTGGAACC...........ACTGGTCCTGGGTGCCACTGTGAAT 3812
|||| |||| ||| | | || || |||||||||||
sj01277 2175 TCCATGCTGGGACCCTCCTGGCCCACCAAGGCCCAGGCACCACTGTGAAT 2224
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mpf00882 3813 ATTGTCCTCCGAACCACTAGA............................. 3833
||| ||||| |||||||||||
sj01277 2225 ATTCTCCTCTGAACCACTAGAGGGCAGGCCAGGCAGGCCAGGCGGGCCCG 2274
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mpf00882 3834 .....AAATGGGGCAAGATGGAGCTGGCCAGGACTGCCCTGACTGGAG.. 3876
|||||||| ||||||||| ||||| | | ||||||
sj01277 2275 TGCAGCTTGTGGGCAAGAAGGAGCTGGCAAGGACCGGCGCTGCTGGAGAC 2324
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mpf00882 3877 ......AGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTG.GGT 3919
|| | ||| || | | | |||| | |||| | | |
sj01277 2325 TGACCCAGCCCTCTGGCTGAGGACATGCAGCAGCTCCTAAATGTAGAGAT 2374
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mpf00882 3920 GCTTGTGGC..CTGCCCCATCCCTCCATCCCCCACGACCCACTTCAGGAG 3967
|| |||||| | | || || | | | | || |||| ||||||
sj01277 2375 GCCTGTGGCTGAGGGGGCCTCTCTACCTGTGTCCCCACTCACTCCAGGAG 2424
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mpf00882 3968 CAGCAGCTTCAGCCAGGCTGACGGGGCA....CTTGCTCCATTGT..CCC 4011
|| |||| | || | | ||| |||||||| |||| ||
sj01277 2425 CACTGGCTTTGGTCACGTCTTAGCAGCAGGGCCTTGCTCCGTTGTTCCCT 2474
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mpf00882 4012 TGCCCTTCACGAGCTGGG.......CCACCCCAGAACCCTGCCACCTGTG 4054
|||||| | | ||| | | || ||| |||||||||||||
sj01277 2475 TGCCCTGGTGGTGGGGGGGCCAGACCGCCTCCGGAATCCTGCCACCTGTG 2524
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mpf00882 4055 ACCCT....CTGCTTACTGCTTCA.CTGTCTTTTC..TCTATCCTGAGGA 4097
|| | ||||||| ||||||| ||||| ||| | | ||||| ||
sj01277 2525 ACTGTCTGACTGCTTAGTGCTTCAGCTGTCCCTTCCTTGTGTCCTG.GGG 2573
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mpf00882 4098 GACCTGCAGGCAGCTCTCTCCTGGGAGCTAAGACCTCAAAC....CCCAC 4143
||||||| ||| || |||||||||| | ||||||| || |||||
sj01277 2574 GACCTGCTGGCGGCCTCTTCCTGGGAGCCATGACCTCAGACCCCACCCAC 2623
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mpf00882 4144 ACTCTGGATTGAGACCC......CACCTCCTTAACTGTCCTCCTGCTGCC 4187
|||| ||| ||||||| | || | || |||||||| ||||||
sj01277 2624 ACTCCAGATCGAGACCCCTGCCTCCCCCCGGCAAATGTCCTCCCGCTGCC 2673
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mpf00882 4188 CTGCAGCCTGCACTTTGCACATGCTTGTCCCCAGCACAG..CCACCGGCC 4235
|||||||||||||||||||||||| ||||||||||| |||| ||||
sj01277 2674 TTGCAGCCTGCACTTTGCACATGCTCACCCCCAGCACAGTCCCACTGGCC 2723
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mpf00882 4236 CTT..................GCCCTTCTCCAGACCTCCTGGGTGCTGTC 4267
| | ||||| | || ||||||| ||| |
sj01277 2724 CCTCACCTCCCCTTCCCTGAGCTCCTTCCCAAGGACTCCTGGTCACTGCC 2773
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mpf00882 4268 TGCTGTGCAACCAGA..CCTAGGGTACAGTCGCCCGGCTGGAACGTGGCA 4315
||||||||| |||| || ||||| ||| ||||||| |||||| ||
sj01277 2774 TGCTGTGCAGTCAGAGGCCCAGGGTCCAGCAGCCCGGCGGGAACG.GGTG 2822
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mpf00882 4316 CTACCCCTTCCCTCTAATTAACCCCAAACTCAGACCCAAGACCGGAGCCT 4365
|| || ||||| | | | | | | | ||||| | ||||| | ||
sj01277 2823 CTGCCTCTTCCTCC..AGTTAGCTCCAGCTCAGGTCTGAGACCCGTGCTG 2870
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mpf00882 4366 AGAAGGGCCTGAGCATC.ATGGTTCCATCTGCCCAGGGCTGGGTCCTGAG 4414
|||| || ||||||| | | || || |||||||||||||||||||||||
sj01277 2871 AGAAAGGTCTGAGCACCGACCGTGCCCTCTGCCCAGGGCTGGGTCCTGAG 2920
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mpf00882 4415 CAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGT 4464
||||||| |||||||||||| | | |
sj01277 2921 CAGCTGGTTTTCCTGCAGGAA....................GGTTGGAGC 2950
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mpf00882 4465 AAGCAAAGGCCTTTTCCCCTGCTCTCATGTCAGCCGGCCTGGGCTGGGTT 4514
|||||||| |||| | |||| |||| | | ||| | |||||
sj01277 2951 AAGCAAAGTCCTT...CTCTGCCCTCAGGGTCAGCTGCCCAGACTGGGGC 2997
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mpf00882 4515 CCAGGCTAGAGAGTCAGCCAGGTGGCCTGTGACTGG.GTGAACTGGAGCT 4563
| || |||| || ||||||| ||||| |||| || | ||||||
sj01277 2998 GGATGCCAGAG....AGGCAGGTGGGCTGTGGCTGGACTGGTCCGGAGCT 3043
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mpf00882 4564 GGCTTCC.TGCCAGACGAGCCTCAGCCCTCCTGGG............... 4597
||||||| | ||||| |||||||||| |||| |
sj01277 3044 GGCTTCCTTACCAGAAAAGCCTCAGCCTTCCTCTGGAAGCATCCCCCGTT 3093
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mpf00882 4598 ........................CAAGGGGTGTGCTTTCCCTGGGGAG. 4622
||||||||||||||||| | || |
sj01277 3094 CTGGGCAAGGGGGAAGGGCTCCTTTAAGGGGTGTGCTTTCCCAGTGGGGA 3143
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mpf00882 4623 ..........TCTTCCCCCTACTACTCACCCTCTTGGTACCTCCCCAACC 4662
|| |||||||||| | || | | | | ||
sj01277 3144 GCAGTCTGGCCCTGCCCCCTACTAAAGCCTCTGCTCTCAGCACTTTCCCC 3193
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mpf00882 4663 CCAGCACTTTCTGTCCTATAATTTGCTT.AAGGAGAGTATAGGCTGCCAG 4711
| || || | ||| |||||| |||| | || |||||||||
sj01277 3194 CAAGTCCT........TGTAACTTGCTTGAAGGTGGGTTCTGGCTGCCAG 3235
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mpf00882 4712 CTCAGCCCTGGATAAATTCCC...ACCCCCTTAAGTTTCACTCACTTTGT 4758
| ||||||| ||| || | ||| |||| ||||||||| |||||
sj01277 3236 CCAGTCCCTGGACAAACTCTCCTGCCCCTTTTAAATTTCACTCATTTTGT 3285
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mpf00882 4759 ATCAACCCAGCAGGCTGGTGTTTCCTTGGCCCCTTAAGGT.......... 4798
|| |||||||||||||||||||| ||| |||| || |
sj01277 3286 ATAAACCCAGCAGGCTGGTGTTTACTTAGCCCTGTAGCTTTTTTCATTTT 3335
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mpf00882 4799 ........GTTTTTCCTCCTGAGTTCACAGTTCTTGTATTCCTTCCACCC 4840
|| |||| || ||||||||| |||| | ||| | ||
sj01277 3336 TTCTTTCCGTCTTTCTTCTTGAGTTCACGGTTCAATATTGCCTCCTCGCC 3385
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mpf00882 4841 CAACAAGGGGAGATAGGTGCCTCTGTTCCCCA............TTCCAC 4878
| ||| | ||| | | | ||||| |||||
sj01277 3386 CTGGTGAGGGGAGGTGCTGCTTTTCTGCCCCACCTGCCGGCTGGTTCCAG 3435
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mpf00882 4879 CTGCACCCCAGCAGGGCTGGGGATAGGCGAGTATGGGACATTGTTTCTGT 4928
| || | || ||||||| ||| | ||||| || | ||| |
sj01277 3436 CAGCGCTGGGGCCCAGCTGGGG...GGCCGGGATGGGGGCTTCTCTCTCT 3482
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mpf00882 4929 GGGTGGGG.ATGGCTGGACTCCCCAGGTTGGGAAGG.TCCTTGCCTAG.T 4975
||| |||| | || ||||||||| ||||| || ||||| ||||| |
sj01277 3483 GGGAGGGGTGCAGGTGCCCTCCCCAGGCTGGGAGGGTTCCTTCCCTAGCT 3532
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mpf00882 4976 TTGTGTCTTCCTCAGCTAGCAAAAGTTGGGGCT.GTGGTCTTAGAGCTGC 5024
||| || | ||| | | ||||||| | ||||||| || || |
sj01277 3533 CCCCATCTGCCCCCGCTGGTGAGAGTTGGGCTTCTTGGTCTTGGAACTCC 3582
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mpf00882 5025 CTGGTGTCAGGACCAGATCATTTCTATAGGTTCTGTAGCCGTTGTTTTAA 5074
|||| | ||| |||| |||||| || | ||| | |||||||||
sj01277 3583 CTGGCATTGGGAACAGAGCATTTC..CAGCATTTGTTGTTGTTGTTTTAC 3630
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mpf00882 5075 TC...........AGCAGATGAATGTTAGAAGATG.CTGCCAAGGCAAGG 5112
|| || | |||||||||||||| || ||||| |||| |
sj01277 3631 TCACCTAACCCTTAGAAAATGAATGTTAGAAGGTGCCTGCCGAGGCGGGA 3680
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mpf00882 5113 CAGAACAT.......GGCTAGAGAAGGTTCCG.GCAGCTCAGA...TTCC 5151
|||| | ||| ||||||| || | |||| | || | ||
sj01277 3681 CAGAGTGTTTGCTCGCGCTGGAGAAGGCTCTGCTCAGCCCTGAGAGTCCC 3730
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mpf00882 5152 ATCCTGCCCAGCAGGTGCCTGGCACTTT..AAGGGACTCTGGCAGCTCTG 5199
|||||||| | | | |||||||||| || ||| ||| | || | |
sj01277 3731 TTCCTGCCCCACCGAT.ACTGGCACTTTAAAAAGGAAGCTGACCGCACAG 3779
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mpf00882 5200 TTCCTAGGTGAGGTGACCACCAGAAGATGGACAGAGCCCTAGTGTGCTTG 5249
| | || || || || ||||||||||| || | | || |||
sj01277 3780 TGTCCAGACGAATTGGCCCCCAGAAGATGGGGAGTTCTGTCCTGCCCTTC 3829
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mpf00882 5250 TCTACTACCTTCCC........................CAGTCAGCATTG 5275
| | | | | || |||| | |
sj01277 3830 TGTGTCTGCGTGACCTCACCCAGCCTAGGAGGGAGGTGCATTCAGGGTAG 3879
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mpf00882 5276 TTTTG.GTCTAGTTCTAAATTCCAGGGCT......CCAAACCAAGCAG.. 5316
|||| ||| ||| || ||| ||||| ||| || |||
sj01277 3880 ATTTGCCTCTCATTCAAAGTTCTGGGGCTTTGGGCGGAAAACAGCCAGCT 3929
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mpf00882 5317 TTGGTACTGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCA 5366
|||| |||| || ||||| | ||| |||| || |||| |
sj01277 3930 TTGGCGCTGTTGGGGAGACTCCTCCAGACCAGGAACCCCAG......... 3970
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mpf00882 5367 AGCCAAGGTCTGGGACTGGATGGCCACTCCAGTAGACGAGAGCTGCCACA 5416
|| |||| ||||||||
sj01277 3971 .............................AAGGAGACAGAGCCTGCCACA 3991
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mpf00882 5417 TCCTCTGCTTCCAGGCACTGGGCCAGGATAACTTAGCTGAAAACATGACC 5466
||||| |||||| |||||||||| | | | |||| || || ||
sj01277 3992 TCCTCCCACGCCAGGCCCTGGGCCAGGGTGATTGGACTGAGAATTTGGCC 4041
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mpf00882 5467 ACAACCAAATGAACACTGGTGGCAGCCAGAGGCTAAGA............ 5504
|||||||||| | |||| | | |||||||| | |
sj01277 4042 ACAACCAAATTGATGCTGGCTGGAACCAGAGGCCAGAAAGCCTGGCCTTG 4091
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mpf00882 5505 .............................GCCTTTCCTCCTGCGCTCAGT 5525
| | ||| | || |||||||
sj01277 4092 TCCCCATGTGGGAGCCCTGTCCTCAGCCCTCTTGTCCCCTTGAGCTCAGT 4141
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mpf00882 5526 GA..TCCCCACGGGTGCCCAGAGCACCTGGACTTCAAATTCTATAT.... 5569
|| |||| | |||||||| ||| |||||||||||||||||||||
sj01277 4142 GAATTCCCACCAGGTGCCCACAGCTCCTGGACTTCAAATTCTATATATTG 4191
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mpf00882 5570 ACAAAGATAGAGGATATATTAGAGGTATTTTTGAAAAGGAATTGGTCTAT 5619
| | || | ||| ||||| |||| |||||||| |||||| |||||||||
sj01277 4192 AGAGAGTTGGAGAGTATATCAGAGATATTTTTGGAAAGGAGTTGGTCTAT 4241
5951 ----+----*----+----*----+----*----+----*----+----* 6000
mpf00882 5620 GCAATGCCAGTTTGGGACCTGTAAGACAGTTTAATGTTTCTATTAGAGAG 5669
|||||| |||||||| | || || |||||||||||| |||||| |||
sj01277 4242 GCAATGTCAGTTTGGAATCTTCTTGAAAGTTTAATGTTTTTATTAG.GAG 4290
6001 ----+----*----+----*----+----*----+----*----+----* 6050
mpf00882 5670 ATATAAAAGATCTGCAATATTTTTAGGGTTCTTTTCTGGTTACCCTACAG 5719
|| ||||
sj01277 4291 ATTTAAA........................................... 4297
6051 ----+----*----+----*----+----*----+----*----+----* 6100
mpf00882 5720 CTGACCACGTGGTCTGGCAGGATGAGCAGGCCCATCTTCTTCTGTGGGGA 5769
sj01277 4298 .................................................. 4298
6101 ----+----*----+----*----+----*----+----*----+----* 6150
mpf00882 5770 GAATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCA 5819
sj01277 4298 .................................................. 4298
6151 ----+----*----+----*----+----*----+----*----+----* 6200
mpf00882 5820 TTCCGTGGGCTGTTCATATCTGTCTCAGCTTATAATAGAAAATTATGTCA 5869
sj01277 4298 .................................................. 4298
6201 ----+----*----+----*----+----*----+----*----+----* 6250
mpf00882 5870 TATGGGGAAATCAGCCTAGTGTCAATGTTTGGTTTGGGGGTGGAATTAAA 5919
| || ||||
sj01277 4298 .........................................GAAAATAAA 4306
6251 ----+----*----+- 6266
mpf00882 5920 TGCCGATGTTTTTGTT 5935
| | | | |
sj01277 4307 GGTCTACAATATC... 4319