FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1205.ptfa, 1848 aa vs ./tmplib.26680 library 1767169 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 15.5890+/-0.0117; mu= -27.8449+/- 0.775 mean_var=855.2167+/-203.734, 0's: 0 Z-trim: 28 B-trim: 0 in 0/36 Lambda= 0.0439 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 42, opt: 30, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4062 ( 1285 res) mbg09432 (1285) 413 43 0.00065 mKIAA0306 ( 1359 res) mbh00666 (1359) 400 42 0.0012 mKIAA1172 ( 1200 res) mfj66157 (1200) 367 40 0.0047 >>mKIAA4062 ( 1285 res) mbg09432 (1285 aa) initn: 287 init1: 287 opt: 413 Z-score: 162.6 bits: 42.8 E(): 0.00065 Smith-Waterman score: 430; 37.991% identity (48.066% ungapped) in 229 aa overlap (1147-1348:537-744) 1120 1130 1140 1150 1160 1170 mKIAA1 VPASVPTRGLQPPPPTVPTVPHPAPSGPFGLGGALEAAESEGLGLGCPSPCKRLDEELKR : : .: .:: . . . :. :... mKIAA4 KKLDSELTARHELQVEMKKMENDFEQKLQDLQGEKDALDSEKQQITAQK--QDLEAEVSK 510 520 530 540 550 560 1180 1190 1200 1210 1220 1230 mKIAA1 NLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLTGPKDTSTPEEPPL--DTGPTA . ..:.. :: :::. . :.:... : : ... ....: ::: :.: . mKIAA4 LTGEVAKLSKELED--AKNE--MASLSAVVVA---PSVSS--SAAVPPAPPLPGDSGTVI 570 580 590 600 610 1240 1250 1260 1270 1280 mKIAA1 SGPPPLPSLPSSNSSGTPEPPLLEEKPPPT--PPPAPTPQPA--PPPP--------PPPP ::: : ::.. : ::: :: : ::: : : : :::: :::: mKIAA4 PPPPPPPPLPGGVVP--PSPPL----PPGTCIPPPPPLPGGACIPPPPQLPGSAAIPPPP 620 630 640 650 660 1290 1300 1310 1320 mKIAA1 PVP---ALPSPTPLVTPVASSPPPPPPPP-----PPPPALPS----PPPPPP-PAPTTVP :.: ..: : :: : :.. ::::: : :::: ::. :::::: :. . :: mKIAA4 PLPGVASIPPPPPL--PGATAIPPPPPLPGATAIPPPPPLPGGTGIPPPPPPLPGSVGVP 670 680 690 700 710 720 1330 1340 1350 1360 1370 1380 mKIAA1 PVAPPEEPPAPSPEDPEPPDARPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEFVI : :: : .:. : :: mKIAA4 P--PPPLPGGPGLPPPPPPFPGAPGIPPPPPGMGVPPPPPFGFGVPAAPVLPFGLTPKKV 730 740 750 760 770 780 >>mKIAA0306 ( 1359 res) mbh00666 (1359 aa) initn: 476 init1: 158 opt: 400 Z-score: 157.8 bits: 42.0 E(): 0.0012 Smith-Waterman score: 570; 23.221% identity (27.458% ungapped) in 1335 aa overlap (79-1327:140-1354) 50 60 70 80 90 100 mKIAA1 PPPRHLPTQFNLLASSSAATAAEPSSPQLYNFSGAAPGP----PPERALPRQDTVIKHYQ ..:: :.: : : : . .. mKIAA0 FSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSPQYGAPGSFAAPGEGGTLA--- 110 120 130 140 150 160 110 120 130 140 150 160 mKIAA1 RPASAQPPPPPPPAHSLQHYLSCGGSYPSMGHRASLACSPLGG----GEPSPGAGEPSKG .:..:: : : :. : .. : .: . : : .. : :. . . mKIAA0 --TSGRPPLLPSRASRSQRAASE--DMTSDEERMVI-CEEEGDDDVIADDSFGTTDIDLK 170 180 190 200 210 220 170 180 190 200 210 220 mKIAA1 GPSGATAGAAGRATGPETAGGGAAGGGGGYRPIIQSPGYKTSKGGYGPATGGATRPPPPR .: . .: ..: : :. . : . :.:.: .. . : : :: : mKIAA0 CKERVTDSESGDSSG-EDPEGNKGFGRKVFSPVIRS-SFTHCRPTLDPEPPG---PPDP- 230 240 250 260 270 230 240 250 260 270 mKIAA1 STATPKCQSLG-GPAAAYAAGKASGAGGAGSQAYSPGQPQGLLGPQAYGQGFGGGQAQDL : : : ::. . ... :: . .. : ..: :. : . : ::: . : : mKIAA0 ----PAAFSKGYGPTPSSSSSPASTSVSV-STSFSLGS--GTFKTQESGQG---STAVPL 280 290 300 310 320 280 290 300 310 320 330 mKIAA1 SKGPSYSGGPPQPPSGP--PPPGLATCQSYSPDQLQGQLYGVQSEPYPGPAAHSQGLPTA : .::: : .. :: :: . :... :.: . :::.. . :.. mKIAA0 RPPPPGAGGPATPSKATRFPPTDSATFRRKRPESV-GSLEA------PGPSVIAAP-PSG 330 340 350 360 370 340 350 360 370 380 390 mKIAA1 SPSLSYSTGHSPALSGHGGGWGPSS----LGGGGEASPSHIIRPLQSP-PATGRPPGVGS . .: . :. . : ::. :. :. :.: . :: . . :: :.: mKIAA0 GGNLLQTLVLPPSKEDREGTRVPSAPAPPLAYGAPAAP--LCRPAATMVTNVVRP--VSS 380 390 400 410 420 430 400 410 420 430 440 mKIAA1 PGAPGKYLSSVLASAPFLAPPGASSYAAG---AGGYKGKGDGSELLAG-PGGSAAERTED .: .:: :: : .. . :.. ::. : ::.. .: : : . .. mKIAA0 TPVP-------IASKPF--PTSGRAEASSNDIAGARTEMGTGSRVPGGSPMGVSLVYSDK 440 450 460 470 480 450 460 470 480 490 500 mKIAA1 EEFLIQHLLQAPSPPRTSGAD-GLVGEDGPADAAKGLGGSGGAGGAPGTP--YELAKEDP . .:.: ..: : ::. .:: ... : :. : : ::..: .:. : mKIAA0 KSAAAA---TSPAPHLVAGPLLGTVGK-APATVTNLLVGTPGYG-APASPAVQFIAQGAP 490 500 510 520 530 510 520 530 540 550 560 mKIAA1 QRYHLQSVIRTSASLDEGATAALELGLGRMKDKKKGPERGGETPEGLATSVVHYGAGAKE . ..:: : .. . ::. .. : . :: : :.: . mKIAA0 GS---ATPAGSGASTGSGPNGPVPLGI--LQPGALG-KAGGITQ-------VQYILPT-- 540 550 560 570 580 570 580 590 600 610 620 mKIAA1 LGAFLQKSP-PPPPPSAQATQPAPHGLLLEAGGPDLPMVLPPPPPQLLPSVLSHAPSPSP : :: .: : : :...:. :: : : .. ..::: .. ... . mKIAA0 LPQQLQVAPAPAPAPGTKAA--APSG---PAPTTSIRFTLPP-------GTSTNGKVLAA 590 600 610 620 630 630 640 650 660 670 680 mKIAA1 SAPKVGVHLLEPATRDGAPQPPPPPPPPM-PLQLEAHLRGHGLEPTAPSPRLRPEESLEP .:: .:. .:. ..:. ::: . :.: :.. : .: : . : : mKIAA0 TAPTAGIPILQ-----SVPSAPPPKAQSVSPVQAT---------PSGGSAQLLPGKVLVP 640 650 660 670 690 700 710 720 730 mKIAA1 ---PGAMQELLGALEPLPSGPGDPGVGPPNSEGKDPAGAYR-SPSPQGTKAPRFVPLTSI :. . :: .::: ..: : .. ...:. . .: : .: . ::. mKIAA0 LAAPSMSVRGGGAGQPLPL-VSSPFSVPVQNGAQQPSKIIQLTPVPVSTPSGLVPPLSPA 680 690 700 710 720 730 740 750 760 770 780 790 mKIAA1 CFPDSLLQDEERSFFPTMEEMF----GGGAADDYGKAGQTEDDGDPKTGAGPPP----GP .: : . . ..:. .. .:: . : .. . : :. :: : mKIAA0 TMPGPTSQPQ-KVLLPSSTRITYVQSAGGHTLPLGTSSACSQTGTV-TSYGPTSSVALGF 740 750 760 770 780 790 800 810 820 830 840 mKIAA1 TAYDPYGPYCGG--RASGTGPE-TPG-LGLDHNKPPELP--STVNAEPL--GLIQSGPHQ :. : :: ..: .: .:: .:.. :.:: :... :. .. ..: mKIAA0 TSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPSPQLPPACTASGGPVITAFYPGSPAP 800 810 820 830 840 850 850 860 870 880 mKIAA1 -SAPPPPPPPPPP-----------PPVSE--PKG----GLTSPIFCSTKPKKLLK-TSSF ::: :: :: ::.. ::: . ..: : :. . : :. mKIAA0 TSAPLGPPSQAPPSLVYTVATSTTPPAATILPKGPPASATATPAPTSPFPSATGSMTYSL 860 870 880 890 900 910 890 900 910 920 930 940 mKIAA1 HLLRRRDPPFQTPKKLYAQEYEFEADEDKADVPADIRLNPRRLPDLVSSCRSRPALSPLG . . : ..:.:. : . . .. . . .::. : :. .:: .: . mKIAA0 VAPKAQRPSPKAPQKVKAAIASIPVGSFESGTTGRPGSTPRQSSD--SGVAREPA-APES 920 930 940 950 960 970 950 960 970 980 990 1000 mKIAA1 DIDFCPPNPGPDGPRRRGRKPTKAKRDGPPRPRGRPRIRPLEGPAMAGPASITTDGAKKP ... : :.: : . :: :..:: : . : :. :: . . ... mKIAA0 ELEGQPTPPAPPPPTETW-PPTA--RSSPPPP-----LPAEERPGTKGPETASKFPSSSS 980 990 1000 1010 1020 1010 1020 1030 1040 1050 1060 mKIAA1 RGRGRGRGRKAEEMGGTRLEPLKPLKIKLSVPKAGEGLGAPSNDVISGVDHNSLDSNLTR : : : . .: :: : : . : .. :. : . . .. : mKIAA0 DWRVPGLGLE------SRGEPPTP-----PSPAPATGPSGSSSGSSEGSSGRAAGDTPER 1030 1040 1050 1060 1070 1070 1080 1090 1100 1110 mKIAA1 EKIEAKIKEVEEKQPEMKSGF-----MASFLDFLKSGKRHPPLYQAGLTP-PL-----SP ... .. :... . ..:. : . : .:: . . : . . : : . mKIAA0 KEVTSSGKKMKVRPHRLKKTFDSVDKVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATS 1080 1090 1100 1110 1120 1130 1120 1130 1140 1150 1160 1170 mKIAA1 PKSVPASV-PTRGLQPPPPTVPTVPHPAPSGPFGLGGALEAAESEGLGLGCPSPCKRLDE :... .: : . ..: : .:. . .. . . . : . .:. mKIAA0 PRAILGSYRKKRKNSTDLDSAPEDP-TSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDR 1140 1150 1160 1170 1180 1190 1180 1190 1200 1210 1220 1230 mKIAA1 ELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPL-TGPKDTSTPEEPPLDTG .. ..: . .. . : :.. . ... ..: . . . :.. . : mKIAA0 TGTETEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIF 1200 1210 1220 1230 1240 1250 1240 1250 1260 1270 1280 mKIAA1 PTASGPP----PLPSLPSSNSSGTPEPPLLEEKPPPTPPP---APTPQPAPPPPPPPPPV :. . . . .. : .:: : : : ::: : :: :.: : : :. mKIAA0 PSKVCLQLKIREVRQKIMQAATPTEQPPG-AEAPLPGPPPTGMAATPVPTPSPAGGPDPT 1260 1270 1280 1290 1300 1310 1290 1300 1310 1320 1330 1340 mKIAA1 -PALPSPTPLVTPVASSPPPPPPPPPPPPALPSPPPPPPPA-PTTVPPVAPPEEPPAPSP :. : : :.: :::: : : : .: : :::. :.:. mKIAA0 SPGSDSGTAQVAP--PLPPPPEPGPGQPGWEGAPQPSPPPSGPSTAATGR 1320 1330 1340 1350 1350 1360 1370 1380 1390 1400 mKIAA1 EDPEPPDARPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEFVIRAEDIPSLKLALQ >>mKIAA1172 ( 1200 res) mfj66157 (1200 aa) initn: 225 init1: 225 opt: 367 Z-score: 147.2 bits: 39.9 E(): 0.0047 Smith-Waterman score: 535; 22.985% identity (28.171% ungapped) in 1092 aa overlap (606-1636:172-1123) 580 590 600 610 620 mKIAA1 PPPPSAQATQPAPHGLLLEAGGPDLPMVLPPPPPQLLPSVLSHAPS---------PSPSA :::: . : :..::. :: .: mKIAA1 IEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISSELAQAPTNSMPTVAQLPSSDA 150 160 170 180 190 200 630 640 650 660 670 mKIAA1 PKVGVHLLEPATRDGAP---------QPPPPPPPPMPLQLEAHLRGHGLE-PTAPS--PR . ..:.. : .: ::: : : . . :.... . :::. :. mKIAA1 FAAVAQLFQ--TTQGQQLQQILQTFQQPPQPQSPALDSAVMAQVQAITAQLKTAPTQPPE 210 220 230 240 250 680 690 700 710 720 mKIAA1 LRP--EESL-------EPPGAMQELLGALEPLPSGPGDPGVGPPNSEGKDPAGAYRSPSP . ...: . : :... : . ..:: . :: : : : mKIAA1 QKTAFDKKLLDRFDYDDEPEAVEDSKKEDAAAISTAALATAAPPAPTAATPAVATAVPVP 260 270 280 290 300 310 730 740 750 760 770 780 mKIAA1 QGTKAPRFVPLTSICFPDSLLQDEERSFFPTMEEM---FGGGAADDYGKAGQTEDDGD-P ..:. : : : . .: . .:. . .:... . : . . .:. : mKIAA1 SATSPPP--PQTPFGYPGDGVQQPACTQHQSMDQFQPRMMPIQQDTMHHQVPLPPNGQMP 320 330 340 350 360 370 790 800 810 820 830 mKIAA1 KTG--AGPPPGPTAYDPYGPYCGGRASGTGPETPGLGLDHNKPPELPSTVNAEPLGLIQS : ..::: : .: : : : . ::.. : .:. .: :. : mKIAA1 GFGLLSAPPPFPPMPQPGMPQPGMAQPGLAQ--PGMAQPTMPQPGMPQPGMPQP-GMAQP 380 390 400 410 420 430 840 850 860 870 880 890 mKIAA1 G---PHQSAPPPPPPPPPPPPVSEPKGGLTSPIFCSTKPKKLLKTSSFHLLRRRDPPFQT : : .. : : : : : . .: :...: . : . :.:. . .: : mKIAA1 GLAQPGMAQPGMPQPAMPQPAMPQP--GMAQPGVSPAPPVQPTFQSTFQ--PQNEPHSQK 440 450 460 470 480 490 900 910 920 930 940 950 mKIAA1 PKKLYAQEYEFEADEDKADVPADIRLNPRRLPDLVSSCRSRPALSPLGDIDFCPPNPGPD :. :. :.:... . .... :..:. .: ::: :: mKIAA1 PH----QQVEMEVEQPCV---TEVK---RHVPESRKS-RSR---SP-------------- 500 510 520 960 970 980 990 1000 1010 mKIAA1 GPRRRGRKPTKAKRDGPPRPRGRPRIRPLEGPAMAGPASITTDGAKKPRGRGRGRGRKAE :::.:. ....:. : :.: : : ..: . ... : : . : :. . mKIAA1 -KRRRSRSGSRSRRSRHRRSRSRSRDRRRHSP---------RSRSQERRDREKERERRQK 530 540 550 560 570 1020 1030 1040 1050 1060 1070 mKIAA1 EMGGTRLEPLKPLKIKLSVPKAGEGLGAPSNDVISGVDH-NSLDS-NLTREKIEAKIKEV . . : . . : : . . . ..:: : ... . ..: :. . : : : mKIAA1 GLPQIKSETASVCSTTLWVGQLDKR--TTQQDVASLLEEFGPIESINMIPPRGCAYIVMV 580 590 600 610 620 630 1080 1090 1100 1110 1120 1130 mKIAA1 EEKQPEMKSGFMASFLDFLKSGKRHPPLYQAGLTPPLSPPKSVP-ASVPTRGLQPPPPTV . .: ... :. :. :. :... ::. : . ..:.. mKIAA1 H-RQDAYRA------LQKLSRGN-----YKVN-------QKSIKIAWALNKGIKADYKQY 640 650 660 670 1140 1150 1160 1170 1180 1190 mKIAA1 PTVPHPAPSGPFGLGGALEAAESEGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVA : . :. ..: : :.. : :. . : .:. ..: :: mKIAA1 WDVELGVTYIPWD---KVKAEELESFCEGGMLDSDTLNPDWK----GIPKKPDNE---VA 680 690 700 710 720 1200 1210 1220 1230 1240 1250 mKIAA1 KNRDLQESISSAISALDDPPLTGPKDTSTPEEPPLDTGPTASGPPPL--PSLPSSNSSGT .: . : . .: :. :: . .: ::. . . ::: : :. :. mKIAA1 QNGGAETSHTEPVS-----PI--PKPVPVPV-PPIPVPAPITVPPPQVPPHQPGPPVVGA 730 740 750 760 770 1260 1270 1280 1290 1300 1310 mKIAA1 PEPPLLEEKPPPTPPPAPTPQPAPPPPPPPPPVPALPSPTPLVTPVASSPPPPPPPPPPP .:: . :: : : :. :::::::: :. .:. : . :: :::: :: mKIAA1 LQPPAFT---PPLGMPPPGFGPGVPPPPPPPPF-LRPGFNPMHLPPGFLPPGPPPPITPP 780 790 800 810 820 1320 1330 1340 1350 mKIAA1 PALPSPPPPPPPAPTTVPPVAPPEE------------PPAPSPEDPEPPDARPLHLAKKQ ..: : :: :. : . : ::: : :: ..:. : : mKIAA1 VSIPPPHTPPISIPNLVSGARGNAESGDSAKMYGSAGPPAAPTSLPTPPVTQPVSLLGTQ 830 840 850 860 870 880 1360 1370 1380 1390 1400 1410 mKIAA1 ETAA--VCGETDEEAGESGGEGIFRERDEFVIRAEDIPSLKLALQTGREPPPIWRVQKAL .: : : .: :. : :: : : :: . : mKIAA1 GVAPGPVIGLQAPSTGLLGA------------RPGLIP---LQRPPGMPPPHLQRFPMMP 890 900 910 920 930 1420 1430 1440 1450 1460 1470 mKIAA1 LQKFTPEI-KDGQRQFCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRVCARKPWHR . . :.. . : : : : . . : : : mKIAA1 PRPMPPHMMHRGPPP--------GPGGFAMPPPHGMKGPF----------------PPHG 940 950 960 970 1480 1490 1500 1510 1520 1530 mKIAA1 PPLPVRRSGQT--KGPTPVGGNSAPPSKVQAPPPKPETPEKMTSEKPPEPAPEPAVPEPP : :: .:. :: : : : . : : . :... ... :. :. . . : mKIAA1 PF--VRPGGMPGLGGPGPGPGASEDRDGRQQQPQQQPPPQQQQQQQQPQQPPQQSPSQQP 980 990 1000 1010 1020 1540 1550 1560 1570 1580 1590 mKIAA1 APEKPSPPRPVEKEKEKEKEKEKEKERVTRPLRSERATSGRQMRTDRSLATGQSTTSRLP :: . .::. ....... .. ...:: : . :. . :. .:. .:. : mKIAA1 APAQQQPPQ-FRNDSRQQFNSGRDQERFGRRSFGSRVENDRERYGSRNDDRDNSNRERRE 1030 1040 1050 1060 1070 1080 1600 1610 1620 1630 1640 1650 mKIAA1 KARPSKVKAEPPPKKRKKWLKEAVGNASAGDGPGGSSSDSESSPGAPSEDERAVPGRLLK .: : : . :.. :.: .:. .: : :: mKIAA1 WGRRS------PDRDRHRDLEERSRRSSGHRDRDRDSRDRESRREKEENRKEKHEVADRA 1090 1100 1110 1120 1130 1140 1660 1670 1680 1690 1700 1710 mKIAA1 TRAMREMYRSYVEMLVSTALDPDMIQALEDTHDELYLPPMRKIDGLLNEHKKKVLKRLSL mKIAA1 GGNKAVEPPLSQVGTIDTVSELNKGEAMATVVKPEESPAEATSPVGPEKDPGSAAEPPR 1150 1160 1170 1180 1190 1200 1848 residues in 1 query sequences 1767169 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:38:20 2006 done: Mon Mar 27 10:38:22 2006 Scan time: 1.460 Display time: 0.410 Function used was FASTA [version 3.4t11 Apr 17, 2002]