FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0543.ptfa, 937 aa vs ./tmplib.26680 library 1768080 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.9732+/-0.00448; mu= 10.3996+/- 0.299 mean_var=98.6690+/-23.348, 0's: 0 Z-trim: 17 B-trim: 160 in 1/35 Lambda= 0.1291 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1513 ( 621 res) mbg06025 ( 621) 225 53 1.6e-07 mKIAA1588 ( 617 res) mbp00262 ( 617) 210 50 1.1e-06 mKIAA1954 ( 643 res) mpj01436 ( 643) 200 48 4.2e-06 mKIAA1852 ( 736 res) mej02019 ( 736) 192 47 1.3e-05 mKIAA1431 ( 833 res) mfj27243 ( 833) 189 46 2.1e-05 mKIAA1611 ( 558 res) mph00982 ( 558) 175 43 9.4e-05 mKIAA4218 ( 601 res) mpm12334 ( 601) 167 42 0.00028 mKIAA1862 ( 1098 res) mbg03386 (1098) 170 43 0.0003 mKIAA4237 ( 519 res) mfj17080 ( 519) 162 41 0.00048 mKIAA1710 ( 461 res) mbg19468 ( 461) 160 41 0.00056 mKIAA4236 ( 919 res) mfj05191 ( 919) 157 40 0.0014 >>mKIAA1513 ( 621 res) mbg06025 (621 aa) initn: 246 init1: 217 opt: 225 Z-score: 227.4 bits: 52.8 E(): 1.6e-07 Smith-Waterman score: 225; 45.833% identity (45.833% ungapped) in 72 aa overlap (221-292:44-115) 200 210 220 230 240 250 mKIAA0 LRQKEIGSDILGPSNSSTLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVYFSRE : : . .. .. .:: :...:.::: : mKIAA1 EMESRAYPLNLTLKEEQKEEEVEIQELEDGPIDMQKVQICSEGAWVPALFDEVAIYFSDE 20 30 40 50 60 70 260 270 280 290 300 310 mKIAA0 EWSLLDKQQKELYRDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKPGKSP :: .: .::: :::. :.:.:: . ::: : :::.:..::. mKIAA1 EWEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMINRLERDEECPNSDEWRLQGVTFA 80 90 100 110 120 130 320 330 340 350 360 370 mKIAA0 SLGRKKRVVVREANSQTRASAIESISHAASVEAGDTHCPPSMCGGEVDRPRSVKSLYRPG mKIAA1 ENEESDFRTPDWASPTNATSHFPQPQPFNSFGLRLPQDITELPEWTEGYPFYMAMGFPGY 140 150 160 170 180 190 >>mKIAA1588 ( 617 res) mbp00262 (617 aa) initn: 202 init1: 177 opt: 210 Z-score: 212.3 bits: 50.0 E(): 1.1e-06 Smith-Waterman score: 210; 36.275% identity (38.144% ungapped) in 102 aa overlap (217-318:53-149) 190 200 210 220 230 240 mKIAA0 CESDLRQKEIGSDILGPSNSSTLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVY : :: .:. .. .::.:.:: mKIAA1 SSLDSADNQESEFSLPSKYDSCQQSLGLFACHAPEPDTP----ARVCSQESVTFQDIAVD 30 40 50 60 70 250 260 270 280 290 300 mKIAA0 FSREEWSLLDKQQKELYRDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKP :...:: :::..:..::.: : .: :.:: ..:: ::..:::. ... :.. mKIAA1 FTEKEWPLLDSSQRKLYKDVMLENYSNLSSLGYQVGKPRLISHLEQEEDLRMEE-RGIQQ 80 90 100 110 120 130 310 320 330 340 350 360 mKIAA0 GKSPSLGRKKRVVVREANSQTRASAIESISHAASVEAGDTHCPPSMCGGEVDRPRSVKSL : ::. : ..: mKIAA1 GPSPDWGTTSKVKWSILLEDIFGKEASDDVRLETSHLLETSSEFSHLCEVFDIGPHLAQP 140 150 160 170 180 190 >>mKIAA1954 ( 643 res) mpj01436 (643 aa) initn: 195 init1: 195 opt: 200 Z-score: 202.0 bits: 48.2 E(): 4.2e-06 Smith-Waterman score: 213; 31.250% identity (34.615% ungapped) in 144 aa overlap (221-350:1-144) 200 210 220 230 240 mKIAA0 LRQKEIGSDILGPSNSSTLFKDSIDFCSQEPPDKEWAKASRTAGELP---ATFEDLAVYF : : . : : : .::.:.:: : mKIAA1 PAHTEAGMAPRPPTAKPQESVTFKDVAVNF 10 20 30 250 260 270 280 290 300 mKIAA0 SREEWSLLDKQQKELYRDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKP- ..::: . :. :::: : .:. :.:: ..::..: :::: :::.. . .: mKIAA1 TQEEWHHVGPAQRSLYRDVMLENYNHLVSLGYQVSKPEVIFKLEQGEEPWISEKEIQRPF 40 50 60 70 80 90 310 320 330 340 350 mKIAA0 ----------GKSPSLGRKKRVVVREANSQTRASAIESISHAASVEAGDTHCPPSMCGGE ..::. : .. . .. :.: . : ... . :.: : : mKIAA1 CPDWKTRPESSRSPQQGVSEVFLRTNVLSHTTIGDIWNVAIQGHQESGRRHLGPEASSQK 100 110 120 130 140 150 360 370 380 390 400 410 mKIAA0 VDRPRSVKSLYRPGSIQRSWFGQFPWLVMDSKETKLFCSVCIERPTLHDKSSRLVQGYIG mKIAA1 KITTLEKKIEQNKVGEDSSLSTDLVPQLDISSSIRPSDCKTFGNNLEHNSELVTQSNILA 160 170 180 190 200 210 >>mKIAA1852 ( 736 res) mej02019 (736 aa) initn: 192 init1: 192 opt: 192 Z-score: 193.1 bits: 46.7 E(): 1.3e-05 Smith-Waterman score: 192; 49.180% identity (49.180% ungapped) in 61 aa overlap (237-297:4-64) 210 220 230 240 250 260 mKIAA0 STLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVYFSREEWSLLDKQQKELYRDG :.::.:.:: :..:::. :: :. :::: mKIAA1 MQEPVTFKDVAVAFTQEEWGQLDLVQRTLYRDV 10 20 30 270 280 290 300 310 320 mKIAA0 MQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKPGKSPSLGRKKRVVVREANSQ : .: : :. :::..:. ::: :: mKIAA1 MLETYGHLLSVGNQIAKPEVISLLEQGEEPWSVEQGYPKSSCPEWMRNTESKALIPAQSV 40 50 60 70 80 90 330 340 350 360 370 380 mKIAA0 TRASAIESISHAASVEAGDTHCPPSMCGGEVDRPRSVKSLYRPGSIQRSWFGQFPWLVMD mKIAA1 SEEEQSSNGMMLERYIWDNPWLSRLGVLGYGDQLEMYHMNQSTGMRQMVFMQKQVLSQRG 100 110 120 130 140 150 >>mKIAA1431 ( 833 res) mfj27243 (833 aa) initn: 181 init1: 181 opt: 189 Z-score: 189.4 bits: 46.2 E(): 2.1e-05 Smith-Waterman score: 189; 33.108% identity (35.252% ungapped) in 148 aa overlap (159-298:25-171) 130 140 150 160 170 180 mKIAA0 SPADILASPEHLLTADDPTLYLPGPLGDFDGLDELLSSPRAEPEDASGSGAIPALYLDCE : : .. : :.:. . :. . mKIAA1 ESVRPSRDMQGMASVVSCEPWALLGRGALCTKARPGGGPAAGTVVAPGSPDRGR 10 20 30 40 50 190 200 210 220 230 240 mKIAA0 SDLRQKEIGSDILGPSNSST----LFKDSIDFCSQEPPDKEWAKASRTAGELPA----TF :.. ..: : .:.: ::. . .: :: :. : . : . . :: mKIAA1 PRSRNSLASQDQQGAVTSGTAHKALFSRDTNFL-QEINRKQEAAPTGTRHKAKSQGLVTF 60 70 80 90 100 110 250 260 270 280 290 300 mKIAA0 EDLAVYFSREEWSLLDKQQKELYRDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKD :.:: ::.::: :...:. :: : .:. :::: :..::.::.::: ::. mKIAA1 GDVAVVFSQEEWEWLNSEQRSLYWKVMLDNYRNLASLGLCASQPDMITSLEQGRDPWMMK 120 130 140 150 160 170 310 320 330 340 350 360 mKIAA0 PDGLKPGKSPSLGRKKRVVVREANSQTRASAIESISHAASVEAGDTHCPPSMCGGEVDRP mKIAA1 RKMRKGQHLDLKAMQETKEFPPKDLSEETLFLAVLRKQLLPHRPKCSMVRAAWEGGAVFT 180 190 200 210 220 230 >>mKIAA1611 ( 558 res) mph00982 (558 aa) initn: 170 init1: 170 opt: 175 Z-score: 177.7 bits: 43.5 E(): 9.4e-05 Smith-Waterman score: 175; 38.462% identity (39.474% ungapped) in 78 aa overlap (232-309:9-84) 210 220 230 240 250 260 mKIAA0 GPSNSSTLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVYFSREEWSLLDKQQKE : :.: .: :.:. ::.::: ::. :. mKIAA1 KKKPGMAVTQGQL--SFSDVAIEFSQEEWECLDHAQRA 10 20 30 270 280 290 300 310 320 mKIAA0 LYRDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKPGKSPSLGRKKRVVVR :.:: : .: : :: . . ..:::: .:: . .... :: mKIAA1 LHRDVMLENYSNLLSLGVTLPNLNAMSKLEQYKGPWTVESEAIRTRKSNGKEYIRAMFRR 40 50 60 70 80 90 330 340 350 360 370 380 mKIAA0 EANSQTRASAIESISHAASVEAGDTHCPPSMCGGEVDRPRSVKSLYRPGSIQRSWFGQFP mKIAA1 SYLLVHERHHTGAKPYKCNECGKVFSQNSHLKSHRRIHTGEKPFKCNHCGKAFSVRSNLT 100 110 120 130 140 150 >>mKIAA4218 ( 601 res) mpm12334 (601 aa) initn: 149 init1: 149 opt: 167 Z-score: 169.2 bits: 42.0 E(): 0.00028 Smith-Waterman score: 167; 46.032% identity (46.032% ungapped) in 63 aa overlap (234-296:51-113) 210 220 230 240 250 260 mKIAA0 SNSSTLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVYFSREEWSLLDKQQKELY : :.::.:.:: ::..:: :: :. :: mKIAA4 RRRPHIWSALGSPLAEKLRREMAVDLLAARGTEPVTFRDVAVSFSQDEWLHLDPAQRSLY 30 40 50 60 70 80 270 280 290 300 310 320 mKIAA0 RDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKPGKSPSLGRKKRVVVREA :. : .: :::: :. : .: ::.. : mKIAA4 REVMLENYSNLASLGFQASIPPVIGKLQKGQDPCMEREAPEDTCLDFEIWPEIEALPPKQ 90 100 110 120 130 140 330 340 350 360 370 380 mKIAA0 NSQTRASAIESISHAASVEAGDTHCPPSMCGGEVDRPRSVKSLYRPGSIQRSWFGQFPWL mKIAA4 DVLTKETSHGLIKNGSTKCVYWKISFGELVKTECRDIAQEQEKKVHGPGAESPKETTSED 150 160 170 180 190 200 >>mKIAA1862 ( 1098 res) mbg03386 (1098 aa) initn: 171 init1: 137 opt: 170 Z-score: 168.6 bits: 42.7 E(): 0.0003 Smith-Waterman score: 170; 47.541% identity (54.717% ungapped) in 61 aa overlap (217-277:14-66) 190 200 210 220 230 240 mKIAA0 CESDLRQKEIGSDILGPSNSSTLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVY ::: :: : ..: .:.:::: mKIAA1 VLRDSLGGPCWHGCSQ-PP-------RRLYPQVPISFKDLAVR 10 20 30 250 260 270 280 290 300 mKIAA0 FSREEWSLLDKQQKELYRDGMQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKP ::.::: ::.. :.:.::: :. .:: :.:. mKIAA1 FSEEEWRLLQEGQREFYRDVMRENYETLVSVGTSELLPLSAFLSPAEAGGATSGESHQDK 40 50 60 70 80 90 310 320 330 340 350 360 mKIAA0 GKSPSLGRKKRVVVREANSQTRASAIESISHAASVEAGDTHCPPSMCGGEVDRPRSVKSL mKIAA1 GQKPHLEHSSQGEQPQQSLHLTALVQLVKEIPEFLFGEVKGTEDYSESGSTSLDGEQTSP 100 110 120 130 140 150 >>mKIAA4237 ( 519 res) mfj17080 (519 aa) initn: 191 init1: 162 opt: 162 Z-score: 165.0 bits: 41.0 E(): 0.00048 Smith-Waterman score: 162; 48.148% identity (48.148% ungapped) in 54 aa overlap (239-292:9-62) 210 220 230 240 250 260 mKIAA0 LFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVYFSREEWSLLDKQQKELYRDGMQ .:::. : :..:::: :. .:..:::: : mKIAA4 VLGFQELVSFEDVIVDFTQEEWSSLNPDQRNLYRDVML 10 20 30 270 280 290 300 310 320 mKIAA0 MSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKPGKSPSLGRKKRVVVREANSQTR .:. ::.. ::.::. :::. mKIAA4 ENYQNLATVGYQLIKPSLISWLEQEEFSKGQKIVFPEWKLQLETKCSAFQQEFLRGNISS 40 50 60 70 80 90 >>mKIAA1710 ( 461 res) mbg19468 (461 aa) initn: 150 init1: 150 opt: 160 Z-score: 163.7 bits: 40.6 E(): 0.00056 Smith-Waterman score: 160; 54.762% identity (54.762% ungapped) in 42 aa overlap (237-278:4-45) 210 220 230 240 250 260 mKIAA0 STLFKDSIDFCSQEPPDKEWAKASRTAGELPATFEDLAVYFSREEWSLLDKQQKELYRDG :.::::.:.:..:::: :: :..:::: mKIAA1 FQAPVTFEDMAMYLTREEWRPLDPTQRDLYRDV 10 20 30 270 280 290 300 310 320 mKIAA0 MQMSYELLASLEPPAAKPDLITKLEQRAAPWIKDPDGLKPGKSPSLGRKKRVVVREANSQ :: .: ..::. mKIAA1 MQENYGNVVSLDFEIRSENEANPKQEFSDDVEFATMSEEPLENAEKNPGSEEAFESGDQA 40 50 60 70 80 90 937 residues in 1 query sequences 1768080 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:22:46 2006 done: Mon Mar 27 10:22:47 2006 Scan time: 1.000 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]