FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0051.ptfa, 1681 aa vs ./tmplib.26680 library 1767336 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.9132+/-0.00523; mu= 18.8833+/- 0.348 mean_var=137.9144+/-33.108, 0's: 0 Z-trim: 4 B-trim: 43 in 1/35 Lambda= 0.1092 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4007 ( 178 res) mnj07273 ( 178) 906 155 1.6e-38 >>mKIAA4007 ( 178 res) mnj07273 (178 aa) initn: 899 init1: 899 opt: 906 Z-score: 783.7 bits: 154.8 E(): 1.6e-38 Smith-Waterman score: 906; 76.966% identity (76.966% ungapped) in 178 aa overlap (112-289:1-178) 90 100 110 120 130 140 mKIAA0 LGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVI :.:: ::::: :::::: .:::::::::.. mKIAA4 KMVSEKKIYDVEQTRYKKSGLHFRHTDNTV 10 20 30 150 160 170 180 190 200 mKIAA0 QWLNAMDEIGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLFKLGLAPQIQDLYGKVDF ::: ::. :::::::::::::.:::::.:: :::::::::::::::.::::::: ::::: mKIAA4 QWLRAMEAIGLPKIFYPETTDVYDRKNIPRMIYCIHALSLYLFKLGIAPQIQDLLGKVDF 40 50 60 70 80 90 210 220 230 240 250 260 mKIAA0 TEEEINNMKIELEKYGIQMPAFSKIGGILANELSVDEAALHAAVIAINEAIDRRVAADTF :::::.::. :::::::::::::::::::::::::::::::::::::::::.. :: .:. mKIAA4 TEEEISNMRKELEKYGIQMPAFSKIGGILANELSVDEAALHAAVIAINEAIEKGVAKQTI 100 110 120 130 140 150 270 280 290 300 310 320 mKIAA0 TALKNPNAMLVNLEEGLAPTYQDVLYQAKQDKMTNAKNRTENSDRERDVYEELLTQAEIQ .:.::::.:. ....:. :: :..: mKIAA4 ITLRNPNAVLTCVDDSLSQEYQKELWEA 160 170 1681 residues in 1 query sequences 1767336 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:11:14 2006 done: Mon Mar 27 10:11:15 2006 Scan time: 1.260 Display time: 0.010 Function used was FASTA [version 3.4t11 Apr 17, 2002]