FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0200.ptfa, 1045 aa vs ./tmplib.26680 library 1767972 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 12.3842+/-0.00777; mu= -18.3167+/- 0.512 mean_var=447.8021+/-108.841, 0's: 0 Z-trim: 11 B-trim: 0 in 0/36 Lambda= 0.0606 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1816 ( 826 res) mfj37232 ( 826) 413 51 8.4e-07 mKIAA1819 ( 443 res) mpj02074 ( 443) 396 49 1.5e-06 mKIAA0827 ( 1033 res) mbg05617 (1033) 291 40 0.0016 >>mKIAA1816 ( 826 res) mfj37232 (826 aa) initn: 593 init1: 175 opt: 413 Z-score: 214.5 bits: 51.0 E(): 8.4e-07 Smith-Waterman score: 1224; 30.998% identity (35.559% ungapped) in 842 aa overlap (294-1044:1-825) 270 280 290 300 310 320 mKIAA0 IAGAGGSVAQSNLMPDLNLNEQEWKELIEELNRSVPDEDMKDLFTEDFEEKKDPEPPGSA : .::..:..:::.:::::::. : .. mKIAA1 LANTVPEDDIQDLFNEDFEEKKEQEFSQTT 10 20 30 330 340 350 360 370 380 mKIAA0 TQTPLAQD-INIKTEFSPAAFEQEQLGSPQVRAGSAGQTFLGASSAPVGTDSPSLGSSQT .:::.:. ...:.. : . : . .:::::.: .:.: : :.. .::. ::.... mKIAA1 METPLSQESVSVKSDASHSPFAHVSLGSPQARPSSSGPPF---STVSTGTNLPSVANTPG 40 50 60 70 80 390 400 410 420 mKIAA0 LFHTTSQPG-VDNSSPNL-----MPASAQAQSAQRAL---TSVVLPSQGPGG----ASEL . .:.:. .::. :..: . .. : .::.. ..: :. .:.. mKIAA1 AQNPASSPANCAVQSPQTPTQAHTPGQAPPRPGNGYLLNPVSVAVSGSGSGSVAGPSSDM 90 100 110 120 130 140 430 440 450 460 470 mKIAA0 SSAHQLQQIAAKQKR-------------EQMLQNPQQAAPAPGPGQLATWQQAGPSHSPL : :.::.:.::.:.. .:. :. :: .: ..:. :: :: mKIAA1 SPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQHSNQTSSWSPLGPPSSPY 150 160 170 180 190 200 480 490 500 510 520 530 mKIAA0 DVPYPMEKPASPSGYKQDFTNSKLLMMPGVNKSSPRPGGPYLQPSHSNLLSHQSPSNLNQ . . ::: :: : : :.:.. .. .:. . . :: .: :..:.: :.::. mKIAA1 GTAFASEKPNSPMMYPQAFNNQNTIVPAMANSLQKTTMNNYLPSNHMNMISQQ-PNNLGT 210 220 230 240 250 260 540 550 560 570 580 mKIAA0 NPVNNQGSVLDYGNTKPLSHYKADCG--QGGPGSGQNKPALMAYL-------------PQ : .:.: ..: :::::::.:..:: . . : .. :: :: :. :: mKIAA1 NSLNKQHNILTYGNTKPLTHFNADLSPRMTPPMANPNKTPLMPYIQQPQQSQQPQPQPPQ 270 280 290 300 310 320 590 600 610 620 mKIAA0 QLP-----------HLSNEQNSLFLMKPK---SGNMPFRSLVPPGQEQNPSSVP-VAAPA : : :::..:. ..:.: : . : . .: ::::. ..: ...: mKIAA1 QQPPPPPQLQAPRAHLSEDQKRMLLIKQKGVMNPPMAYAALPAHGQEQHAVGIPRTTGPM 330 340 350 360 370 380 630 640 650 660 670 680 mKIAA0 ASVGTQPTVSVASTHNSSP----YLSSQQQAAVMKQHQLLLDQQKQREQLQQQQFL--QR . . :. : . . ..:: .:.:: :::.::: .:.::. : . :.:::: :: mKIAA1 QN--SVPSGSGSMVSGASPGGLGFLGSQPQAAIMKQ--MLMDQRAQLMEHQKQQFLREQR 390 400 410 420 430 440 690 700 710 720 mKIAA0 QHLLAEQEKQQFQRH---------LTRP--PPQYQDPTQSTFP-QQVGQFTG-PSAAVPG :. .:..:: :.. : .: : :. . .. .: :::.:: : :. . mKIAA1 QQQQQQQQQQQQQQQQQQILAEQQLQQPHLPRQHLQQQRNPYPVQQVNQFQGSPQDIAAV 450 460 470 480 490 500 730 740 750 760 770 780 mKIAA0 MNNLGPSNSSCPRVFPQPGTLMSMGPGHAPVSSLPSSSGQQDRGVAQFTGSQSLPQNSLY :... .. :.. : . .:.:::.. : ... ....:.. :.:.... . : ..: mKIAA1 RNQVALQSMRASRLIAQNAGMMGMGPSQNP-GTMATAAAQSEIGLASYSAPPT-SQPGMY 510 520 530 540 550 560 790 800 810 820 830 840 mKIAA0 GMASGLAQIVAQPPPQATS---THAHIPRQTNVGQNASTSAAYGQNSLGSASLSQQHS-- .: .:..:.. . .. . .... :: .:... ...::. : ...:::::. mKIAA1 NMNTGMTQMLQHSNQSGMGIPHNQSQGPRPPASSQGVGMVSGFGQSMLVNSALSQQHQQL 570 580 590 600 610 620 850 860 870 880 890 mKIAA0 KGTLPPGLTKPQ-VPRVSAAMGS--QNA-SWQHQGMPNLSSQTSGNSSVNPFTAAPSFHI ::.. .: .:: ::....::. :.: .::.... .. ..:::. ..::. . :. . mKIAA1 KGSVGQALPRPQGPPRLQSVMGTVQQGAQNWQQRSLQGVPGRTSGE--LGPFNNGASYPL 630 640 650 660 670 900 910 920 930 940 950 mKIAA0 QQAHLKLAGQQFSQAMPSRPMAPLSSAGAAGPMLPPVSAQQRNSAPASAPPQAAPQ---Q : .. .:. :.: :.. :.:. ...::. . : .:. :. :. : :.: : mKIAA1 QAGQPRLTKQHFPQGL-SQPVMD-ANTGAVRTLNP--AAMGRQMMPTLAGQQSASQVRPL 680 690 700 710 720 730 960 970 980 990 1000 1010 mKIAA0 GLPGLSPSGPELGAFGQSPTSQ-MSGR--PGLHCAQAYPVRTMGQELPFAYSGQPGSSGL .:::: . : . ::.: :..: ..: . . .::: :: .:.. ..:::. .... mKIAA1 VMPGLSQGVPGMPAFSQPPAQQQIAGGNFAASNQGQAYE-RTPAQDMSYSYSGEGVGAAF 740 750 760 770 780 790 1020 1030 1040 mKIAA0 SSVAGHTDLIDSLLKNRTSEEWINELDDLLGSQ .. :::.::..:. ..::..:::.:.:. mKIAA1 PGLPDSTDLVDSIIKSGPGDEWMQELDELFGNP 800 810 820 >>mKIAA1819 ( 443 res) mpj02074 (443 aa) initn: 134 init1: 87 opt: 396 Z-score: 210.1 bits: 49.3 E(): 1.5e-06 Smith-Waterman score: 427; 26.906% identity (29.777% ungapped) in 446 aa overlap (628-1044:10-441) 600 610 620 630 640 650 mKIAA0 PKSGNMPFRSLVPPGQEQNPSSVPVAAPAASVGTQPTVSVASTHNS-SPYLSSQQQAAVM ..: .:. . :. :. : :..::: ... mKIAA1 LDQHTVVGQNTGPSPSPNSCSNPNTGSGYMNSQQ--SLL 10 20 30 660 670 680 690 700 710 mKIAA0 KQHQLLLDQQKQREQL-QQQQFLQRQHLLAEQEK----QQFQRHLTRPPPQYQDPTQSTF .:... : :: . :.::.: .:..::. :: .:..::::::::.:.: ..: mKIAA1 NQQMMGKKQTLQRPTMEQKQQLLLQQQMLADAEKLSPQDQMNRHLTRPPPDYKDQRRNTG 40 50 60 70 80 90 720 730 740 750 760 mKIAA0 P-QQVGQFTGPSAAVPGMNNLGPSNS-SCPRVFPQPGTLMSMGPGHAPVSSLPSSSGQQD : ..:..: :..: .: . .: : .. ..::: . : .: : :. mKIAA1 TLQPAAQYSGGSSTVSLNSNQALTNPVSTHTILTPNSSLMSTSHGM----RMPLLSTVQN 100 110 120 130 140 150 770 780 790 800 810 820 mKIAA0 RGVAQFTGSQSLPQNSLYGMASGLAQIVAQPPPQATSTHAHIP---RQTNVG-QNASTSA :. :. : . :...: . :.. : :. . : : . .: .:... : mKIAA1 IGMY---GNLPCNQPGTYNVTSTMNQLTQQRNTTQLITNQNNPLMSRPSPLGANNGNNVA 160 170 180 190 200 210 830 840 850 860 870 880 mKIAA0 AYGQNSLGSASLSQQHSKGTLPPGLTKPQVPRVSAAMGSQNAS---WQHQGMPNLSSQTS ..: .: :: ::: . .: .:. .. : :..: . :.. : : . . .... mKIAA1 TFGAGSAGS---SQQL-RPNLAHSLSGMSAQRSSTVMITANTTATNWASQEVTGKQQEAL 220 230 240 250 260 890 900 910 920 930 mKIAA0 GNSSVNPFTAAPSFHIQQAHLK--LAGQQFSQ--AMPSRPMAPLSSAGAAGPMLPPVSAQ ...: :..:. . . :. ...: ::: . : ..: . . : ...: mKIAA1 KSTGVRFPTSTPAAYTPNQSLQPGVGSQPFSQRAVAPPSQLSPAVQMRPMNQMNQALNGQ 270 280 290 300 310 320 940 950 960 970 980 990 mKIAA0 QRNSAPA-SAPPQAAPQQGLPGLSPSG-----PELGAFGQSPTSQMSGRPGLH-CAQAYP .: . . :. :.: ...::: :. :. .: :. .. :. . ..:. mKIAA1 TLGSLRGLNLRPNQLAAQSLSNMNPSGTGLNHPRTGT-NQPPSLTPNAFPSSNQSSRAFQ 330 340 350 360 370 380 1000 1010 1020 1030 1040 mKIAA0 VRTMGQELPFAYSGQPGSSGLSSVAGHTDLIDSLLKNRT-SEEWINE--LDDLLGSQ :..: : . .: ..: .. . .:.::::::.. ...:... ::..:::. mKIAA1 GPDHGSDLAFDFLSQQSDSMCPALNSDADFIDSLLKTEPGNDDWMKDINLDEILGSNS 390 400 410 420 430 440 >>mKIAA0827 ( 1033 res) mbg05617 (1033 aa) initn: 198 init1: 92 opt: 291 Z-score: 155.6 bits: 40.4 E(): 0.0016 Smith-Waterman score: 336; 24.533% identity (29.582% ungapped) in 750 aa overlap (239-931:335-1013) 210 220 230 240 250 260 mKIAA0 LQTAGKHSLGLDPINKKCLADSGIHLNGGSNSSEPFPLSLSKE-LKQEPVDDLPCMIAGA :: : .: .. .. .: . :: : mKIAA0 LSSVLFSTPDGNENVQEQLNADIFQVSQIQNSVSPGMFSSAESAVHTRPDNLLP----GR 310 320 330 340 350 360 270 280 290 300 310 mKIAA0 GGSVAQS--NLMPDLNLNEQEWKELIE-------ELNRSV---PDEDMKDLF----TEDF . :: :. : . . . ..:. ....: :...:. . ...:: . . mKIAA0 ADSVHQQTENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSAASASG 370 380 390 400 410 420 320 330 340 350 360 mKIAA0 EEKKDP---EPPGSATQTPLAQDINIKTE-FS--PAAF--EQEQLGSPQVRAGSAGQTFL ...: .: . : .:.... : :: ::: : .::: .. :.:.. mKIAA0 SLQQSPVYQQPSHMMSALPTNEDMQMQCELFSSPPAASGNETSTTTTPQV--ATPGSTMF 430 440 450 460 470 370 380 390 400 410 mKIAA0 GASSAPVGTDSPSLGSS--QTLFHTT--------SQPGVD--NSSPNLMPASAQAQSAQR . :. : .. . ... ...:.: ::: :. .:. :.: :.: ...:. mKIAA0 QTPSSGDGEETGAQAKQIQNSVFQTMVQMQRSGDSQPQVNLFSSTKNIM--SVQNNGTQQ 480 490 500 510 520 530 420 430 440 450 460 470 mKIAA0 ALTSVVLPSQGPGGASELSSAHQLQQIAAKQKREQMLQNPQQAAPAPGPGQLATWQQAGP .: : .:: : :.:.. ::: . .: . : .::. : .:. :.. mKIAA0 QGNS--LFQQGSEMMS-LQSGNFLQQSSHSQAQ---LFHPQN--PIADAQNLSQETQGSI 540 550 560 570 580 480 490 500 510 520 530 mKIAA0 SHSPLDVPYPMEKPASPSGYKQDFTNSKLLMMPGVNKSSPRPGGPYLQPSHSNLLSHQSP ::: . . . . :: . .. .:. . ..: :. : : . .::..: mKIAA0 FHSPNPIVHSQTSTASSEQLQPSMFHSQNTIAVLQGSSVPQD-----QQSPNIFLSQSSI 590 600 610 620 630 640 540 550 560 570 580 590 mKIAA0 SNLNQNPVNNQGSVLDYGNTKPLSHYKADCGQGGPGSGQNKPALMAYLPQQLPHLSNEQN .::. : : .. .. .. . .: .. . .. :..: . : : ::.:: mKIAA0 NNLQTNTVAQEEQISFFAAQNSISPLQSTSNTEQQAAFQQQPPISHI---QTPILSQEQA 650 660 670 680 690 700 600 610 620 630 640 650 mKIAA0 SLFLMKPKSGNMPFRSLVPPGQEQNPSSVPVAAPAASVGTQ-PTVSVASTHNSSPYLSSQ .:.. .. :. : :. :. .: . :: : :.. : .:: :.. mKIAA0 -----QPSQQGL-FQPQVALGSLP-PNPMPQNQQGPIFQTQRPIVGMQS---NSP--SQE 710 720 730 740 660 670 680 690 700 mKIAA0 QQAAVMKQHQLLLDQQKQREQLQQQQFLQRQHLLAEQEKQQFQRHLTRPPPQYQ-DPTQS :: ..:.: ::.:..: ::. ... :. .: . .:. .:::... .:.:. mKIAA0 QQQQQQQQQQ----QQQQQQQQQQSILFSNQNAMATMASQK------QPPPNMMFSPNQN 750 760 770 780 790 710 720 730 740 750 760 mKIAA0 TFPQQVGQFTGPSAAVPGMNNLGPSNS-SCPRVF---PQPGTLMSMGP--GHAPVSSLPS . .: : .. ..:..: :. . : : : ..:.. :: ...: .:: mKIAA0 PMASQEQQ---NQSIFHQQSNMAPMNQEQQPMQFQNQPTVSSLQNPGPTQSESPQTSLFH 800 810 820 830 840 850 770 780 790 800 810 820 mKIAA0 SSGQQDRGVAQFTGSQSLPQNSLY---GMASGLAQIVAQPPPQATSTHAHIPRQTNVGQN :: : . ..: . :.. : .:. . :.: . :: : . .. :... : . mKIAA0 SSPQIQ--LVQGSPSSQDQQVTLFLSPASMSALQTSINQPDMQQSPLYS--PQNNIPGIQ 860 870 880 890 900 910 830 840 850 860 870 mKIAA0 ASTSAAYGQNSLGSASLSQQHSKGTLPPGLTKPQVPRVSAAMGSQNASWQHQ-GMPNLSS .:::. : :.: .. . ::. ..: .::..: . :. : : mKIAA0 GSTSSPQPQ-----ATLFHNTTGGTINQIQNSPG--------SSQQTSGMFLFGIQNNCS 920 930 940 950 880 890 900 910 920 930 mKIAA0 Q--TSGNSSVNPFTAAPSFHIQQAHLKLAGQQ-----FSQAMP-SRPMAPLSSAGAAGPM : ::: ... : . ::.. . ::. .:: :: . :.: ::.... : mKIAA0 QLLTSGPATLPDQLMAIN---QQGQPQNEGQSSVTTLLSQQMPETSPLA--SSVNSSQNM 960 970 980 990 1000 1010 940 950 960 970 980 990 mKIAA0 LPPVSAQQRNSAPASAPPQAAPQQGLPGLSPSGPELGAFGQSPTSQMSGRPGLHCAQAYP mKIAA0 EKIDLLVSLQSQGNNLTGSF 1020 1030 1045 residues in 1 query sequences 1767972 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:14:25 2006 done: Mon Mar 27 10:14:27 2006 Scan time: 1.050 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]