FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4113.ptfa, 618 aa vs ./tmplib.26680 library 1768399 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.2960+/-0.00728; mu= -2.8026+/- 0.480 mean_var=322.5099+/-77.431, 0's: 0 Z-trim: 10 B-trim: 24 in 1/35 Lambda= 0.0714 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0655 ( 1083 res) mfj00059 (1083) 1484 167 5.9e-42 mKIAA1027 ( 2564 res) mia05043 (2564) 361 52 6.6e-07 mKIAA0320 ( 1471 res) mbg01292 (1471) 297 45 4.6e-05 >>mKIAA0655 ( 1083 res) mfj00059 (1083 aa) initn: 1606 init1: 1293 opt: 1484 Z-score: 845.6 bits: 167.4 E(): 5.9e-42 Smith-Waterman score: 1752; 48.823% identity (51.405% ungapped) in 637 aa overlap (1-608:406-1039) 10 20 30 mKIAA4 LEAELAEQQHLGRQAMDDCEFLRTELDELK ::::: ::.. ..:. : : :: :: .:: mKIAA0 REVETLRAELEKIKMEAQRYISQLKGQVNGLEAELEEQRKQKQKALVDNEQLRHELAQLK 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA4 RQREDTEKAQRSLTEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQVSVARQ . . . : : ::::.:.: ::::::::.:::...::.::::::...::..:..: mKIAA0 ALQLEGARNQGLREEAERKASATEARYSKLKEKHSELINTHAELLRKNADTAKQLTVTQQ 440 450 460 470 480 490 100 110 120 130 140 mKIAA4 AQVDLEREKKELA--------DSFARTQEQQDVLENLKHELATSRQELQVLHSNLETSAQ .: .. : :..:: .: . .::.: ::.::.:::. :: . : . : mKIAA0 SQEEVARVKEQLAFQMEQAKRESEMKMEEQSDQLEKLKRELAARAGELARAQEALSRTEQ 500 510 520 530 540 550 150 160 170 180 mKIAA4 SEAKWLTQIAELEKEQGSLATVAAQREEEL----SALRD--------QLESTQIK--LAG : .. ... :. :. .:. :. ::: :: : .:. : .:.: : : : mKIAA0 SGSELSSRLDTLNAEKEALSGVVRQREAELLAAQSLVREKEEALSQEQQRSSQEKGELRG 560 570 580 590 600 610 190 200 210 220 230 240 mKIAA4 ------AQES-MCQQVKDQRKTLLAGIRKAAEREIQEALSQLEEPTLISCAGSTDHLLSK .::. . :.. :.. ..: . :: .:.:.:.:..: . :..: :.:.:. mKIAA0 QLAEKESQEQGLRQKLLDEQLAVLRSAAAEAEAILQDAVSKLDDPLHLRCTSSPDYLVSR 620 630 640 650 660 670 250 260 270 280 290 300 mKIAA4 VSSVSSCLEQLEKNGSQYLACPEDISELLHSITLLAHLTGDTIIQGSATSLRAPPEPADS .... . . ::.. .:::: :: : :. ..: ..::..:::..:.::: :: .::: mKIAA0 AQAALDSVSGLEQGHTQYLASSEDASALVAALTRFSHLAADTIVNGAATSHLAPTDPADR 680 690 700 710 720 730 310 320 330 340 350 360 mKIAA4 LTEACRQYGRETLAYLSSLEEEGTMENADVTALRNCLSRVKTLGEELLPRGLDIKQEELG : ..::. : ..: ...:... .. :. . .: :. . ::..: :..::..::::: mKIAA0 LMDTCRECGARALELVGQLQDQTVLPRAQPSLMRAPLQGILQLGQDLKPKSLDVRQEELG 740 750 760 770 780 790 370 380 390 400 410 420 mKIAA4 DLVDKEMAATSAAIEAATTRIEEILSKSRAGDTGVKLEVNERILGSCTSLMQAIKVLVVA .::::::::::::: :. :::...:..: ..:::::::::::.:::.::.::..::.. mKIAA0 AMVDKEMAATSAAIEDAVRRIEDMMSQARHESSGVKLEVNERILNSCTDLMKAIRLLVMT 800 810 820 830 840 850 430 440 450 460 470 480 mKIAA4 SKDLQKEIVESGRGTASPKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGKGKF : .:::::::::::.:. .::::::::::::::::::::::::: .:..:: :: ::. mKIAA0 STSLQKEIVESGRGAATQQEFYAKNSRWTEGLISASKAVGWGATQLVESADKVVLHMGKY 860 870 880 890 900 910 490 500 510 520 530 540 mKIAA4 EELMVCSREIAASTAQLVAASKVKANKGSLNLTQLQQASRGVNQATAAVVASTISGKSQI :::.:::.:::::::::::::::::::.: .:..::. :: ::. .: ::::: ::. :: mKIAA0 EELIVCSHEIAASTAQLVAASKVKANKNSPHLSRLQECSRTVNERAANVVASTKSGQEQI 920 930 940 950 960 970 550 560 570 580 590 600 mKIAA4 EETDSMDFSSMTLTQIKRQEMDSQVRVLELENDLQKERQKLGELRKKHYELAGVAEGWEE :. :.::::...: ..:.:::..::::::::. :. :: .::::::.:: ::: : mKIAA0 EDRDTMDFSGLSLIKLKKQEMETQVRVLELEKTLEAERVRLGELRKQHYVLAG---GMGT 980 990 1000 1010 1020 1030 610 mKIAA4 GTEASPSTVQEAIPDKE .: :: mKIAA0 PSEEEPSRPSPAPRSGATKKPPLAQKPSIAPRTDNQLDKKDGVYPAQLVNY 1040 1050 1060 1070 1080 >>mKIAA1027 ( 2564 res) mia05043 (2564 aa) initn: 275 init1: 183 opt: 361 Z-score: 216.3 bits: 52.2 E(): 6.6e-07 Smith-Waterman score: 387; 23.679% identity (25.341% ungapped) in 549 aa overlap (60-592:2027-2555) 30 40 50 60 70 80 mKIAA4 KRQREDTEKAQRSLTEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNAEV-TKQVSVA :... .: .: . . :.:.: .....: mKIAA1 GTQACITAASAVSGIIADLDTTIMFATAGTLNREGAETFADHREGILKTAKVLVEDTKVL 2000 2010 2020 2030 2040 2050 90 100 110 120 130 140 mKIAA4 RQ-AQVDLEREKKELADSFARTQEQQDVLENLKHELATSRQELQVLHSNLETSAQSEAKW : : . :. . .: : . ::.. :.. : ::. : .... :: mKIAA1 VQNAAGSQEKLAQAAQSSVATITRLADVVKLGAASLGAEDPETQVVLIN---AVKDVAKA 2060 2070 2080 2090 2100 2110 150 160 170 180 190 200 mKIAA4 LTQIAELEKEQGSLATVAAQREEELSALRDQLESTQIKLAGAQESMCQQVKDQRKTLLAG : .. : .:: . . :. ::... .. :. . :: . : mKIAA1 LGDLISATK-------AAAGKVGDDPAVW-QLKNSAKVMVTNVTSLLKTVKAVEDEATKG 2120 2130 2140 2150 2160 210 220 230 240 250 260 mKIAA4 IR--KAAEREIQEALSQLEEPTLISCAGSTDHLLSKVSSVSSCLEQLEKNGSQYLACPED : .:. ..:.. :. . : . ... . .. ..... . :. .: .. mKIAA1 TRALEATTEHIRQELAVFCSPEPPAKTSTPEDFIRMTKGITMATAKAVAAGN---SCRQE 2170 2180 2190 2200 2210 2220 270 280 290 300 310 320 mKIAA4 ISELLHSITLLAHLTGDTIIQGSATSLRAPPEPADSLTEACRQYGRETL-AYLSSLEEEG ... . .: . .: . . .... :: : .. .:::: .:: :.. mKIAA1 --DVIATANLSRRAIADMLRACKEAAFH--PEVAPDVRLRALHYGRECANGYLELLDHVL 2230 2240 2250 2260 2270 330 340 350 360 370 mKIAA4 -TME--NADVTA-LRNCLSRVKTLGEELLPRGLDIKQEELGD------LVDKEMAATSAA :.. : :. : . .:: ::. . .: : : ....:. ...:: mKIAA1 LTLQKPNPDLKQQLTGHSKRVAGSVTELIQAAEAMKGTEWVDPEDPTVIAENELLGAAAA 2280 2290 2300 2310 2320 2330 380 390 400 410 420 430 mKIAA4 IEAATTRIEEILSKSRAGDTGVKLEVNERILGSCTSLMQAIKVLVVASKDLQKEIVESGR ::::. ..:.. ... .. .:. .:.:: . :. : ..:: :.. :.:.: .:. mKIAA1 IEAAAKKLEQLKPRAKPKEADESLNFEEQILEAAKSIAAATSALVKAASAAQRELVAQGK 2340 2350 2360 2370 2380 2390 440 450 460 470 480 490 mKIAA4 GTASPKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGKGKFEELMVCSREIAAS : : . ...:..:::::.. :. ... . .::. .:::... :.:. ....::: mKIAA1 VGAIPANAL-DDGQWSQGLISAARMVAAATNNLCEAANAAVQGHASQEKLISSAKQVAAS 2400 2410 2420 2430 2440 2450 500 510 520 530 540 550 mKIAA4 TAQLVAASKVKANKGSLNLTQLQQASRGVNQATAAVV-ASTISGKSQIEETDSMDFSSMT ::::..: ::::.. : . .:: :. .:..:. .: :. .. . .:.... . mKIAA1 TAQLLVACKVKADQDSEAMKRLQAAGNAVKRASDNLVKAAQKAAAFEDQENETVVVKEKM 2460 2470 2480 2490 2500 2510 560 570 580 590 600 610 mKIAA4 LTQIKRQEMDSQVRVLELENDLQKERQKLGELRKKHYELAGVAEGWEEGTEASPSTVQEA . : : . .: ..:. : .:.. :.:....:...:.. mKIAA1 VGGIA-QIIAAQEEMLRKERELEEARKKFAQIRQQQYKFLPSELRDEH 2520 2530 2540 2550 2560 mKIAA4 IPDKE >>mKIAA0320 ( 1471 res) mbg01292 (1471 aa) initn: 260 init1: 191 opt: 297 Z-score: 183.2 bits: 45.3 E(): 4.6e-05 Smith-Waterman score: 365; 24.330% identity (27.790% ungapped) in 522 aa overlap (137-602:959-1471) 110 120 130 140 150 160 mKIAA4 ARTQEQQDVLENLKHELATSRQELQVLHSNLETSAQSEAKWLTQIAELEKE-QGSLATVA : .::: : .::.::. : .::.. mKIAA0 DHRENILKTAKALVEDTKLLVSGAASTPDKLAQAAQSSAATITQLAEVVKLGAASLGSND 930 940 950 960 970 980 170 180 190 200 mKIAA4 AQREEEL--------SALRDQLESTQ------------IKLAGAQESMCQQVKDQRKTLL . . : .:: : . .:. .: :: . : .: . ::. mKIAA0 PETQVVLINAIKDVAKALSDLIGATKGAASKPADDPSMYQLKGAAKVMVTNVTSLLKTVK 990 1000 1010 1020 1030 1040 210 220 230 240 250 mKIAA4 A-------GIR--KAAEREIQEALSQLEEPTLISCAGSTDHLLSKVSSVSSCLEQLEKNG : : : .:. . :.. :. .. . ..: .. . ..... . : mKIAA0 AVEDEATRGTRALEATIEYIKQELTVFQSKDIPEKTSSPEESIRMTKGITMATAKAVAAG 1050 1060 1070 1080 1090 1100 260 270 280 290 300 310 mKIAA4 SQYLACPEDISELLHSITLLAHLTGDTIIQGSATSLRAPPEPADSLTEACRQYGRE-TLA . .: .. ... . .: . ..: .: . .:. : . :.: : :: : ::. mKIAA0 N---SCRQE--DVIATANLSRKAVSDMLIACKQASFY-PDVSEEVRTRALR-YGTECTLG 1110 1120 1130 1140 1150 1160 320 330 340 350 360 mKIAA4 YLSSLEEEGTMENADVTALRNCLS----RVKTLGEELLPRGLDIKQEELGD------LVD ::. ::. .. . . :.. :. :: ::. . .: : : ... mKIAA0 YLDLLEHVLVILQKPTPELKHQLAAFSKRVAGAVTELIQAAEAMKGTEWVDPEDPTVIAE 1170 1180 1190 1200 1210 1220 370 380 390 400 410 420 mKIAA4 KEMAATSAAIEAATTRIEEILSKSRAGDTGVKLEVNERILGSCTSLMQAIKVLVVASKDL :. ...:.::::. ..:.. ... .. :. .:.:: . :. : ..:: ... mKIAA0 TELLGAAASIEAAAKKLEQLKPRAKPKQADETLDFEEQILEAAKSIAAATSALVKSASAA 1230 1240 1250 1260 1270 1280 430 440 450 460 470 480 mKIAA4 QKEIVESGRGTASPKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGKGKFEELM :.:.: .:. . : . : ...:..:::::.. :. ... . .::. :::... :.:. mKIAA0 QRELVAQGKVGSIPAN-AADDGQWSQGLISAARMVAAATSSLCEAANASVQGHASEEKLI 1290 1300 1310 1320 1330 1340 490 500 510 520 530 mKIAA4 VCSREIAASTAQLVAASKVKANKGSLNLTQLQ---------------QASRGVNQATAAV ....:::::::..: ::::.. : . .:: :. .:..:. . mKIAA0 SSAKQVAASTAQLLVACKVKADQDSEAMKRLQVMVTDAGGKILLLERAAGNAVKRASDNL 1350 1360 1370 1380 1390 1400 540 550 560 570 580 590 mKIAA4 VASTISGKSQIEETDSMDFSSMTLTQIKRQEMDSQVRVLELENDLQKERQKLGELRKKHY : .. .. . :.. .. . : : . .: ..:. : .:.. :.::...:...: mKIAA0 VRAAQKAAFGKADDDDVVVKTKFVGGIA-QIIAAQEEMLKKERELEEARKKLAQIRQQQY 1410 1420 1430 1440 1450 600 610 mKIAA4 ELAGVAEGWEEGTEASPSTVQEAIPDKE .. . .:: mKIAA0 KFLPTELREDEG 1460 1470 618 residues in 1 query sequences 1768399 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:02:16 2006 done: Mon Mar 27 11:02:17 2006 Scan time: 0.780 Display time: 0.160 Function used was FASTA [version 3.4t11 Apr 17, 2002]