# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mnj12200.fasta.nr -Q ../query/mKIAA4013.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4013, 308 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919780 sequences Expectation_n fit: rho(ln(x))= 4.9752+/-0.000185; mu= 10.8126+/- 0.010 mean_var=66.6446+/-13.036, 0's: 54 Z-trim: 65 B-trim: 942 in 1/66 Lambda= 0.157106 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|21759414|sp|Q9D753.1|EXOS8_MOUSE RecName: Full= ( 276) 1824 421.8 7e-116 gi|37589850|gb|AAH59089.1| Exosome component 8 [Mu ( 276) 1819 420.7 1.5e-115 gi|148703331|gb|EDL35278.1| exosome component 8, i ( 283) 1796 415.5 5.8e-114 gi|149064770|gb|EDM14921.1| exosome component 8 (p ( 276) 1790 414.1 1.5e-113 gi|45595709|gb|AAH67250.1| Exosc8 protein [Mus mus ( 270) 1785 413.0 3.1e-113 gi|109120492|ref|XP_001085228.1| PREDICTED: exosom ( 276) 1738 402.3 5.1e-110 gi|114649397|ref|XP_522661.2| PREDICTED: exosome c ( 276) 1733 401.2 1.1e-109 gi|149730159|ref|XP_001495596.1| PREDICTED: simila ( 276) 1727 399.9 2.9e-109 gi|21759409|sp|Q96B26.1|EXOS8_HUMAN RecName: Full= ( 276) 1722 398.7 6.3e-109 gi|122920909|pdb|2NN6|C Chain C, Structure Of The ( 278) 1722 398.7 6.4e-109 gi|73993245|ref|XP_534492.2| PREDICTED: similar to ( 276) 1721 398.5 7.4e-109 gi|74146647|dbj|BAE41329.1| unnamed protein produc ( 257) 1699 393.5 2.2e-107 gi|55957290|emb|CAI14013.1| exosome component 8 [H ( 275) 1694 392.4 5.1e-107 gi|126327460|ref|XP_001368047.1| PREDICTED: simila ( 276) 1673 387.6 1.4e-105 gi|119628984|gb|EAX08579.1| exosome component 8, i ( 316) 1669 386.8 2.9e-105 gi|122135904|sp|Q2KHU3.1|EXOS8_BOVIN RecName: Full ( 276) 1663 385.3 6.7e-105 gi|2815604|gb|AAC39558.1| Opa-interacting protein ( 265) 1657 384.0 1.7e-104 gi|109120494|ref|XP_001084987.1| PREDICTED: exosom ( 267) 1646 381.5 9.5e-104 gi|149635838|ref|XP_001511768.1| PREDICTED: simila ( 276) 1595 369.9 2.9e-100 gi|114649399|ref|XP_001147508.1| PREDICTED: exosom ( 246) 1523 353.6 2.2e-95 gi|224043308|ref|XP_002196618.1| PREDICTED: simila ( 276) 1482 344.3 1.5e-92 gi|51513372|gb|AAH80360.1| Exosc8 protein [Xenopus ( 276) 1419 330.0 3e-88 gi|27371055|gb|AAH41271.1| MGC52847 protein [Xenop ( 276) 1415 329.1 5.6e-88 gi|56269196|gb|AAH87445.1| LOC496046 protein [Xeno ( 276) 1413 328.7 7.7e-88 gi|148703326|gb|EDL35273.1| exosome component 8, i ( 212) 1409 327.7 1.2e-87 gi|66267273|gb|AAH95236.1| Exosome component 8 [Da ( 277) 1338 311.7 1e-82 gi|49618917|gb|AAT68043.1| Opa-interacting protein ( 277) 1335 311.0 1.6e-82 gi|182889712|gb|AAI65543.1| Exosc8 protein [Danio ( 277) 1333 310.6 2.2e-82 gi|156230391|gb|AAI52249.1| MGC174638 protein [Dan ( 277) 1331 310.1 3e-82 gi|47227071|emb|CAG00433.1| unnamed protein produc ( 275) 1308 304.9 1.1e-80 gi|114649403|ref|XP_001147354.1| PREDICTED: exosom ( 210) 1291 300.9 1.3e-79 gi|73993249|ref|XP_857305.1| PREDICTED: similar to ( 210) 1278 298.0 1e-78 gi|210105378|gb|EEA53390.1| hypothetical protein B ( 275) 1274 297.2 2.3e-78 gi|72041533|ref|XP_796992.1| PREDICTED: similar to ( 275) 1179 275.6 7.1e-72 gi|72061093|ref|XP_783510.1| PREDICTED: similar to ( 275) 1179 275.6 7.1e-72 gi|59006476|emb|CAI46226.1| hypothetical protein [ ( 248) 1138 266.3 4.1e-69 gi|194040557|ref|XP_001927006.1| PREDICTED: simila ( 246) 1067 250.2 2.8e-64 gi|156213123|gb|EDO34153.1| predicted protein [Nem ( 276) 1057 248.0 1.5e-63 gi|73993247|ref|XP_857268.1| PREDICTED: similar to ( 200) 1052 246.8 2.5e-63 gi|210105377|gb|EEA53389.1| hypothetical protein B ( 259) 1027 241.2 1.6e-61 gi|190584562|gb|EDV24631.1| hypothetical protein T ( 266) 992 233.3 4e-59 gi|148703330|gb|EDL35277.1| exosome component 8, i ( 146) 953 224.2 1.1e-56 gi|198426220|ref|XP_002120565.1| PREDICTED: simila ( 279) 942 221.9 1.1e-55 gi|91081401|ref|XP_972667.1| PREDICTED: similar to ( 271) 931 219.4 5.8e-55 gi|66529825|ref|XP_624000.1| PREDICTED: similar to ( 281) 909 214.5 1.9e-53 gi|156553642|ref|XP_001600402.1| PREDICTED: simila ( 277) 905 213.5 3.5e-53 gi|116116739|gb|EAA00202.3| AGAP012402-PA [Anophel ( 274) 846 200.2 3.7e-49 gi|149064772|gb|EDM14923.1| exosome component 8 (p ( 140) 840 198.6 5.6e-49 gi|212507832|gb|EEB11694.1| Exosome complex exonuc ( 276) 832 197.0 3.4e-48 gi|108884054|gb|EAT48279.1| exosome complex exonuc ( 274) 819 194.0 2.6e-47 >>gi|21759414|sp|Q9D753.1|EXOS8_MOUSE RecName: Full=Exos (276 aa) initn: 1824 init1: 1824 opt: 1824 Z-score: 2236.8 bits: 421.8 E(): 7e-116 Smith-Waterman score: 1824; 100.000% identity (100.000% similar) in 276 aa overlap (33-308:1-276) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|217 MAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI 220 230 240 250 260 270 mKIAA4 QSMRHK :::::: gi|217 QSMRHK >>gi|37589850|gb|AAH59089.1| Exosome component 8 [Mus mu (276 aa) initn: 1819 init1: 1819 opt: 1819 Z-score: 2230.7 bits: 420.7 E(): 1.5e-115 Smith-Waterman score: 1819; 99.638% identity (100.000% similar) in 276 aa overlap (33-308:1-276) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|375 MAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|375 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVAASFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI 220 230 240 250 260 270 mKIAA4 QSMRHK :::::: gi|375 QSMRHK >>gi|148703331|gb|EDL35278.1| exosome component 8, isofo (283 aa) initn: 1796 init1: 1796 opt: 1796 Z-score: 2202.4 bits: 415.5 E(): 5.8e-114 Smith-Waterman score: 1796; 99.632% identity (100.000% similar) in 272 aa overlap (37-308:12-283) 10 20 30 40 50 60 mKIAA4 ALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRA :.:::::::::::::::::::::::::::: gi|148 DALTETRFKHCFRTVEPLEYYRRFLKENCRPDGRELGEFRA 10 20 30 40 70 80 90 100 110 120 mKIAA4 TTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCSSRFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCSSRFR 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 TGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILDACTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILDACTF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 ALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDPTGEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDPTGEE 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 EHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVIQSMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVIQSMR 230 240 250 260 270 280 mKIAA4 HK :: gi|148 HK >>gi|149064770|gb|EDM14921.1| exosome component 8 (predi (276 aa) initn: 1790 init1: 1790 opt: 1790 Z-score: 2195.2 bits: 414.1 E(): 1.5e-113 Smith-Waterman score: 1790; 97.101% identity (99.638% similar) in 276 aa overlap (33-308:1-276) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|149 MAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD ::::::::::::::::::::::..:::.:::::::::::::::::::::::::::::::: gi|149 SRFRTGPPGEEAQVTSQFIADVIENSQIIKKEDLCISPGKLAWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|149 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRANPVATSFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI ::::::::::::::: ::.::::::::::::::::::::::::::::::::::::::::: gi|149 TGEEEHLSTGTLTVVMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI 220 230 240 250 260 270 mKIAA4 QSMRHK :::.:: gi|149 QSMKHK >>gi|45595709|gb|AAH67250.1| Exosc8 protein [Mus musculu (270 aa) initn: 1785 init1: 1785 opt: 1785 Z-score: 2189.2 bits: 413.0 E(): 3.1e-113 Smith-Waterman score: 1785; 100.000% identity (100.000% similar) in 270 aa overlap (39-308:1-270) 10 20 30 40 50 60 mKIAA4 GWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRATT :::::::::::::::::::::::::::::: gi|455 TVEPLEYYRRFLKENCRPDGRELGEFRATT 10 20 30 70 80 90 100 110 120 mKIAA4 VNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 VNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 PPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILDACTFAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 PPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILDACTFAL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 LAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDPTGEEEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 LAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDPTGEEEH 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 LSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVIQSMRHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|455 LSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVIQSMRHK 220 230 240 250 260 270 >>gi|109120492|ref|XP_001085228.1| PREDICTED: exosome co (276 aa) initn: 1738 init1: 1738 opt: 1738 Z-score: 2131.5 bits: 402.3 E(): 5.1e-110 Smith-Waterman score: 1738; 92.754% identity (99.275% similar) in 276 aa overlap (33-308:1-276) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|109 MAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::.::::::::::::::::::::::::::::::::::::.::::.:::::::::::::: gi|109 EFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPTDAPDKGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD ::::.:::::::::.:::::::..:::.:.:::::::::::::::::::::::::::::: gi|109 SRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP ::::::::::::::::::::::::::::::::::::::.::.:::::::::::::::::: gi|109 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI :::::::.:::::.: ::.:::::::::::::::::::::::::::::::::.::.:::: gi|109 TGEEEHLATGTLTIVMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVI 220 230 240 250 260 270 mKIAA4 QSMRHK .::. : gi|109 KSMKPK >>gi|114649397|ref|XP_522661.2| PREDICTED: exosome compo (276 aa) initn: 1733 init1: 1733 opt: 1733 Z-score: 2125.3 bits: 401.2 E(): 1.1e-109 Smith-Waterman score: 1733; 92.391% identity (99.275% similar) in 276 aa overlap (33-308:1-276) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|114 MAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::.::::::::::::::::::::::::::::::::::::.::::.:::::::::::::: gi|114 EFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPTDAPDKGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD ::::.:::::::::.:::::::..:::.:.:::::::::::.:::::::::::::::::: gi|114 SRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP ::::::::::::::::::::::::::::::::::::::.::.:::::::::::::::::: gi|114 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI :::::::.:::::.: ::.:::::::::::::::::::::::::::::::::.::.:::: gi|114 TGEEEHLATGTLTIVMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVI 220 230 240 250 260 270 mKIAA4 QSMRHK .::. : gi|114 KSMKPK >>gi|149730159|ref|XP_001495596.1| PREDICTED: similar to (276 aa) initn: 1727 init1: 1727 opt: 1727 Z-score: 2118.0 bits: 399.9 E(): 2.9e-109 Smith-Waterman score: 1727; 91.667% identity (99.275% similar) in 276 aa overlap (33-308:1-276) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|149 MAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::.:::::::::::::::::::::::::::.::::::::.::::.:::::::::::::: gi|149 EFRTTTVNIGSISTADGSALVKLGNTTVICGIKAEFAAPPTDAPDKGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD ::::.:::::::::.:::::::..:::.:.:::::::::::::::::::::::::::::: gi|149 SRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLAWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP ::::::::::::::::::::.::::::::::::::.::.::.:::::::::::::::::: gi|149 ACTFALLAALKNVQLPEVTISEETALAEVNLKKKSFLNIRTHPVATSFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI :::::::.::::::: ::.:::::::::::::::::::::::::::::::::.::.:::. gi|149 TGEEEHLATGTLTVVMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVV 220 230 240 250 260 270 mKIAA4 QSMRHK .::. : gi|149 KSMKPK >>gi|21759409|sp|Q96B26.1|EXOS8_HUMAN RecName: Full=Exos (276 aa) initn: 1722 init1: 1722 opt: 1722 Z-score: 2111.9 bits: 398.7 E(): 6.3e-109 Smith-Waterman score: 1722; 92.029% identity (98.913% similar) in 276 aa overlap (33-308:1-276) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|217 MAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::.::::::::::::::::::::::::::::::::::: .::::.:::::::::::::: gi|217 EFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD ::::.:::::::::.:::::::..:::.:.:::::::::::.:::::::::::::::::: gi|217 SRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP ::::::::::::::::::::::::::::::::::::::.::.:::::::::::::::::: gi|217 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI :::::::.:::::.: ::.:::::::::::::::::::::::::::::::::.::.:::: gi|217 TGEEEHLATGTLTIVMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVI 220 230 240 250 260 270 mKIAA4 QSMRHK .::. : gi|217 KSMKPK >>gi|122920909|pdb|2NN6|C Chain C, Structure Of The Huma (278 aa) initn: 1722 init1: 1722 opt: 1722 Z-score: 2111.8 bits: 398.7 E(): 6.4e-109 Smith-Waterman score: 1722; 92.029% identity (98.913% similar) in 276 aa overlap (33-308:3-278) 10 20 30 40 50 60 mKIAA4 IPPSALGWRHAWRPEGAGAEGCAGAERAGKMAAGFKTVEPLEYYRRFLKENCRPDGRELG :::::::::::::::::::::::::::::: gi|122 DPMAAGFKTVEPLEYYRRFLKENCRPDGRELG 10 20 30 70 80 90 100 110 120 mKIAA4 EFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRGYVVPNVDLPPLCS :::.::::::::::::::::::::::::::::::::::: .::::.:::::::::::::: gi|122 EFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYVVPNVDLPPLCS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 SRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCDLICLDYDGNILD ::::.:::::::::.:::::::..:::.:.:::::::::::.:::::::::::::::::: gi|122 SRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDP ::::::::::::::::::::::::::::::::::::::.::.:::::::::::::::::: gi|122 ACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDP 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 TGEEEHLSTGTLTVVTDEDGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVI :::::::.:::::.: ::.:::::::::::::::::::::::::::::::::.::.:::: gi|122 TGEEEHLATGTLTIVMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVI 220 230 240 250 260 270 mKIAA4 QSMRHK .::. : gi|122 KSMKPK 308 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 01:42:08 2009 done: Tue Mar 17 01:47:54 2009 Total Scan time: 798.260 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]