FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0050.ptfa, 158 aa vs ./tmplib.26680 library 1768859 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.4055+/-0.00406; mu= 10.4040+/- 0.268 mean_var=78.5433+/-18.999, 0's: 0 Z-trim: 26 B-trim: 153 in 1/35 Lambda= 0.1447 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0041 ( 807 res) mbg03660 ( 807) 704 156 2.2e-39 mKIAA1716 ( 277 res) mbj00321 ( 277) 525 119 2e-28 mKIAA1334 ( 992 res) mpm09174 ( 992) 174 46 5.2e-06 mKIAA1728 ( 1313 res) mbg03474 (1313) 170 45 1.1e-05 mKIAA0379 ( 377 res) mtj01105 ( 377) 159 42 2.4e-05 mKIAA1223 ( 600 res) mfj51380 ( 600) 159 43 3.3e-05 mKIAA1148 ( 1589 res) mfj27189 (1589) 157 43 8.2e-05 mFLJ00246 ( 1454 res) mpm02140 (1454) 152 42 0.00016 mKIAA0229 ( 1198 res) mpf00455 (1198) 151 41 0.00016 mKIAA0946 ( 465 res) mbx00001 ( 465) 144 39 0.00025 mFLJ00392 ( 445 res) mid31005 ( 445) 143 39 0.00028 mKIAA1977 ( 649 res) mph01546 ( 649) 137 38 0.00084 mKIAA1981 ( 296 res) mic06024 ( 296) 133 37 0.0009 mFLJ00040 ( 638 res) mpm09196 ( 638) 132 37 0.0017 mKIAA4244 ( 902 res) msh08318 ( 902) 133 37 0.0018 mKIAA1099 ( 981 res) mfj15083 ( 981) 127 36 0.0046 mKIAA1785 ( 617 res) mph01357 ( 617) 123 35 0.0061 mKIAA1306 ( 1347 res) mbg04314 (1347) 126 36 0.0065 >>mKIAA0041 ( 807 res) mbg03660 (807 aa) initn: 819 init1: 553 opt: 704 Z-score: 799.3 bits: 156.4 E(): 2.2e-39 Smith-Waterman score: 704; 68.153% identity (69.935% ungapped) in 157 aa overlap (2-154:647-803) 10 20 30 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIR .:: ::.::::::::::.: ...:::::. mKIAA0 PEGERQESSVFLDSKHLNPGLQLYRASYEKNLPKMAEALAHGADVNWANSDENQATPLIQ 620 630 640 650 660 670 40 50 60 70 80 90 mKIAA0 ATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEG :. ..::..::::::::::::: : :::::::::.::::: .::::::::. : : :: mKIAA0 AVLGGSLVTCEFLLQNGANVNQRDVQGRGPLHHATVLGHTGQVCLFLKRGANQHATDEEG 680 690 700 710 720 730 100 110 120 130 140 mKIAA0 RDPLTIAMETTNADIVTLLRLAK----MREAEAAQGQAGDETYLDIFRDFSLMASDDPEK .:::.::.:..:::::::::::. :::.:. :: ::::: ::::::: :::..::: mKIAA0 KDPLSIAVEAANADIVTLLRLARMNEEMRESEGLYGQPGDETYQDIFRDFSQMASNNPEK 740 750 760 770 780 790 150 mKIAA0 LSRRSHDLHTL :.: ..: mKIAA0 LNRFQQDSQKF 800 >>mKIAA1716 ( 277 res) mbj00321 (277 aa) initn: 625 init1: 498 opt: 525 Z-score: 602.7 bits: 118.5 E(): 2e-28 Smith-Waterman score: 525; 64.062% identity (66.129% ungapped) in 128 aa overlap (3-126:123-250) 10 20 30 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRA ::..: ::::::.:::..... . :::..: mKIAA1 EAWSLADVRELHPGLLHPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLVQA 100 110 120 130 140 150 40 50 60 70 80 90 mKIAA0 TAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGR . ..::..:::::::::.::: :: ::.::::::.::.:: .::::::::: : : : . mKIAA1 VLGGSLIVCEFLLQNGADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQQ 160 170 180 190 200 210 100 110 120 130 140 mKIAA0 DPLTIAMETTNADIVTLLRLAK----MREAEAAQGQAGDETYLDIFRDFSLMASDDPEKL ::::::....:::::::::::. :::::: :: : mKIAA1 DPLTIAVQAANADIVTLLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQEFIGL 220 230 240 250 260 270 150 mKIAA0 SRRSHDLHTL mKIAA1 HLEES >>mKIAA1334 ( 992 res) mpm09174 (992 aa) initn: 164 init1: 164 opt: 174 Z-score: 200.3 bits: 45.9 E(): 5.2e-06 Smith-Waterman score: 174; 34.906% identity (35.922% ungapped) in 106 aa overlap (12-117:154-256) 10 20 30 40 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLLAC : . .: .. .:: ::. :. . :: mKIAA1 PAENIDNSGKTALHYAAAQGCLQAVQLLCEHKSPINLKDL-DGNI-PLLVAVQNGHSEAC 130 140 150 160 170 180 50 60 70 80 90 100 mKIAA0 EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLTIAMET .:::..::.::. :. :: : : : .. . ..:.::::. :. :.. : . . mKIAA1 HFLLDHGADVNSRDKNGRTALMLACETGSSNTVDALIKKGADLSLVDSLGHNALHYSKLS 190 200 210 220 230 240 110 120 130 140 150 mKIAA0 TNADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL :: : .:: :.:. . mKIAA1 ENAGIQNLL-LSKISQDADLKTPTKPKQHDQVSKISSERSGTPKKRKAPPPPISPTQLSD 250 260 270 280 290 300 >>mKIAA1728 ( 1313 res) mbg03474 (1313 aa) initn: 405 init1: 153 opt: 170 Z-score: 194.4 bits: 45.2 E(): 1.1e-05 Smith-Waterman score: 172; 34.653% identity (35.354% ungapped) in 101 aa overlap (10-110:586-684) 10 20 30 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLL : .: ::: . :: :::. :. . : mKIAA1 GAAVSRANRRGVPPLFCAARQGHWQVVRLLLDRGCDVNLSD-KQGR-TPLMVASCEGHLS 560 570 580 590 600 610 40 50 60 70 80 90 mKIAA0 ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLTIAM . ::::..:: ... :. : . : : . :: ... ....::.. : .:: :: .: mKIAA1 TVEFLLSKGAALSSLDKEGLSALSWACLKGHRAVVQYLVEEGAEIDQTDKNGRTPLDLAA 620 630 640 650 660 670 100 110 120 130 140 150 mKIAA0 ETTNADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL .:. : : mKIAA1 FYGDAETVLYLVEKGAVIEHVDHSGMRPLDRAIGCRNTAVVVTLLRKGAKLGNAAWAMAT 680 690 700 710 720 730 >>mKIAA0379 ( 377 res) mtj01105 (377 aa) initn: 162 init1: 135 opt: 159 Z-score: 188.2 bits: 42.3 E(): 2.4e-05 Smith-Waterman score: 159; 36.667% identity (37.931% ungapped) in 90 aa overlap (24-110:110-199) 10 20 30 40 50 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNA-TPLIRATAANSLLACEFLLQN-GAN- ::: .:: :. .. : :.:... ::. mKIAA0 GYTALHWACYNGHETCVELLLEQDVFQKIDGNAFSPLHCAVINDNEGAAEMLIDSLGASI 80 90 100 110 120 130 60 70 80 90 100 110 mKIAA0 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLTIAMETTNADIVTLL :: .:: :: ::: :.. :. :.:...:.... :. :. :: .: :. ... : .: mKIAA0 VNATDSKGRTPLHAAAFTDHVECLQLLLSQNAQVNSADSTGKTPLMMAAENGQTNTVEML 140 150 160 170 180 190 120 130 140 150 mKIAA0 RLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL mKIAA0 VSSASADLTLQDKSKNTALHLACGKGHETSALLILEKITDRNLINATNAALQTPLHVAAR 200 210 220 230 240 250 >>mKIAA1223 ( 600 res) mfj51380 (600 aa) initn: 156 init1: 156 opt: 159 Z-score: 185.9 bits: 42.5 E(): 3.3e-05 Smith-Waterman score: 181; 36.634% identity (37.374% ungapped) in 101 aa overlap (10-110:106-204) 10 20 30 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLL ..::::::. .. .: : : : :.: mKIAA1 KSNIDQRGYDGRNALRVAALEGHRDIVELLFSHGADVNYKDA-DGRPTLYILALE-NQLT 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA0 ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLTIAM :..:.:::::. .:. :: :: . ::. .. ... ::..: :.: :. : : mKIAA1 MAEYFLENGANVEASDAEGRTALHVSCWQGHVEMVRVLIACHADVNAADNEKRSALQSAA 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA0 ETTNADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL .. .: :: mKIAA1 WQGHVKVVQLLIEHGAVVDHTCNQGATALCIAAQEGHVDVVQVLLEHGADPNHADQFGRT 200 210 220 230 240 250 >>mKIAA1148 ( 1589 res) mfj27189 (1589 aa) initn: 259 init1: 145 opt: 157 Z-score: 178.8 bits: 42.6 E(): 8.2e-05 Smith-Waterman score: 180; 35.644% identity (36.364% ungapped) in 101 aa overlap (10-110:672-770) 10 20 30 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLL :.:::::: .. :: :::. :.. . : mKIAA1 GAAVAQPNRRGAVPLFSTVRQGHWQIVDLLLTHGADVNMAD-KQGR-TPLMMAASEGHLG 650 660 670 680 690 40 50 60 70 80 90 mKIAA0 ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLTIAM . .::: .::.. :. : : : . :: ... .. :: : .:: :: .: mKIAA1 TVDFLLAQGASIALMDKEGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA0 ETTNADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL .:..: .: mKIAA1 FYGDAEVVQFLVDHGAMIEHVDYSGMRPLDRAVGCRNTSVVVTLLKKGAKIGCQTLPSRP 760 770 780 790 800 810 >>mFLJ00246 ( 1454 res) mpm02140 (1454 aa) initn: 452 init1: 149 opt: 152 Z-score: 173.6 bits: 41.5 E(): 0.00016 Smith-Waterman score: 152; 31.683% identity (31.683% ungapped) in 101 aa overlap (10-110:1278-1378) 10 20 30 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLL : .::::: : .. : : :. . mFLJ00 RKANVEHRARLVLHPMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYK 1250 1260 1270 1280 1290 1300 40 50 60 70 80 90 mKIAA0 ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLTIAM ::.:.. ::... .. : :: :. :: .. :... :::. : :.. :: :. mFLJ00 FCELLINRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKITPLMSAF 1310 1320 1330 1340 1350 1360 100 110 120 130 140 150 mKIAA0 ETTNADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL . .. .: : mFLJ00 RKGHVKVVQYLVKEVSQFPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEANK 1370 1380 1390 1400 1410 1420 >>mKIAA0229 ( 1198 res) mpf00455 (1198 aa) initn: 173 init1: 151 opt: 151 Z-score: 173.4 bits: 41.2 E(): 0.00016 Smith-Waterman score: 151; 39.394% identity (39.394% ungapped) in 66 aa overlap (45-110:93-158) 20 30 40 50 60 70 mKIAA0 DVNWVNVGQGNATPLIRATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLA . : ::: .::.: :::::.. :: .. mKIAA0 GGGGGGSGSGGGSGGGGLGSSSHPLSSLLSMWRGPNVNCVDSTGYTPLHHAALNGHRDVV 70 80 90 100 110 120 80 90 100 110 120 130 mKIAA0 CLFLKRGADLGARDTEGRDPLTIAMETTNADIVTLLRLAKMREAEAAQGQAGDETYLDIF ..:. : .. :..: :: .: .:.:: :: mKIAA0 EVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVRLLIQQGPSHTRVNEQNNDNETALHCA 130 140 150 160 170 180 140 150 mKIAA0 RDFSLMASDDPEKLSRRSHDLHTL mKIAA0 AQYGHTEVVKALLEELTDPTMRNNKFETPLDLAALYGRLEVVKLLLGAHPNLLSCSTRKH 190 200 210 220 230 240 >>mKIAA0946 ( 465 res) mbx00001 (465 aa) initn: 120 init1: 120 opt: 144 Z-score: 170.2 bits: 39.2 E(): 0.00025 Smith-Waterman score: 144; 31.373% identity (32.000% ungapped) in 102 aa overlap (10-110:146-246) 10 20 30 mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLL ...:: :. .. :. :.::: :: . : mKIAA0 GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG-GDLNSTPLHWATRQGHLS 120 130 140 150 160 170 40 50 60 70 80 90 mKIAA0 ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGRDPLT-IA :.. ::. . :. : . .: :. .:::... .. .: :. : .: :: : mKIAA0 MVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAA 180 190 200 210 220 230 100 110 120 130 140 150 mKIAA0 METTNADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL ..: ..: . :: mKIAA0 YRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGGNVDAQNVKG 240 250 260 270 280 290 158 residues in 1 query sequences 1768859 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:11:13 2006 done: Mon Mar 27 10:11:13 2006 Scan time: 0.380 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]