# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mni13228.fasta.nr -Q ../query/mKIAA0118.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0118, 253 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7908268 sequences
Expectation_n fit: rho(ln(x))= 5.0937+/-0.000187; mu= 9.7564+/- 0.010
mean_var=81.7223+/-15.704, 0's: 39 Z-trim: 128 B-trim: 0 in 0/65
Lambda= 0.141874
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full= ( 222) 1464 308.6 5.5e-82
gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ra ( 223) 1452 306.2 3e-81
gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=R ( 223) 1430 301.7 6.9e-80
gi|109097798|ref|XP_001117520.1| PREDICTED: simila ( 223) 1424 300.4 1.6e-79
gi|114645863|ref|XP_522469.2| PREDICTED: similar t ( 224) 1420 299.6 2.8e-79
gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full= ( 225) 1418 299.2 3.8e-79
gi|126339429|ref|XP_001370428.1| PREDICTED: simila ( 227) 1415 298.6 5.8e-79
gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full ( 222) 1412 298.0 8.8e-79
gi|194037756|ref|XP_001925094.1| PREDICTED: simila ( 222) 1410 297.6 1.2e-78
gi|118082329|ref|XP_001233648.1| PREDICTED: simila ( 220) 1390 293.5 2e-77
gi|224094073|ref|XP_002192267.1| PREDICTED: simila ( 220) 1384 292.3 4.6e-77
gi|89266851|emb|CAJ82566.1| RAB21, member RAS onco ( 221) 1380 291.4 8.2e-77
gi|38014530|gb|AAH60498.1| MGC68816 protein [Xenop ( 221) 1380 291.4 8.2e-77
gi|47212281|emb|CAF89513.1| unnamed protein produc ( 217) 1287 272.4 4.4e-71
gi|115313619|gb|AAI24523.1| Zgc:154045 [Danio reri ( 216) 1282 271.4 8.8e-71
gi|149743106|ref|XP_001490458.1| PREDICTED: simila ( 181) 1111 236.3 2.7e-60
gi|73535741|pdb|1YZT|A Chain A, Gppnhp-Bound Rab21 ( 184) 1110 236.1 3.1e-60
gi|73535743|pdb|1YZU|A Chain A, Gppnhp-Bound Rab21 ( 170) 1107 235.5 4.5e-60
gi|73535747|pdb|1Z08|A Chain A, Gppnhp-Bound Rab21 ( 170) 1098 233.6 1.6e-59
gi|198418761|ref|XP_002119635.1| PREDICTED: simila ( 218) 1043 222.5 4.7e-56
gi|215493921|gb|EEC03562.1| RAS-related protein, p ( 215) 1034 220.6 1.7e-55
gi|190579637|gb|EDV19728.1| hypothetical protein T ( 209) 1026 219.0 5.1e-55
gi|156213990|gb|EDO34991.1| predicted protein [Nem ( 216) 1023 218.4 8e-55
gi|149898836|gb|ABR27886.1| Ras-related small GTPa ( 218) 989 211.4 1e-52
gi|193654889|ref|XP_001948825.1| PREDICTED: simila ( 226) 987 211.0 1.4e-52
gi|156547415|ref|XP_001604485.1| PREDICTED: simila ( 222) 964 206.3 3.5e-51
gi|91078236|ref|XP_966494.1| PREDICTED: similar to ( 216) 926 198.5 7.6e-49
gi|212517295|gb|EEB19206.1| rab21, putative [Pedic ( 218) 897 192.6 4.7e-47
gi|30580479|sp|Q8WQ53|RAB21_GEOCY Ras-related prot ( 229) 856 184.2 1.6e-44
gi|166208512|sp|P34142.2|RAB21_DICDI RecName: Full ( 212) 845 181.9 7.3e-44
gi|66548006|ref|XP_393353.2| PREDICTED: similar to ( 222) 844 181.7 8.7e-44
gi|304604|gb|AAC37383.1| RabB gi|739977|prf||2 ( 213) 834 179.7 3.5e-43
gi|89258431|gb|ABD65439.1| Rab21 [Suberites domunc ( 222) 833 179.5 4.2e-43
gi|72132814|ref|XP_793125.1| PREDICTED: similar to ( 180) 795 171.6 7.9e-41
gi|221126548|ref|XP_002167019.1| PREDICTED: simila ( 138) 770 166.4 2.2e-39
gi|158596123|gb|EDP34522.1| ras-related protein Ra ( 219) 747 161.9 8.2e-38
gi|190617160|gb|EDV32684.1| GF22152 [Drosophila an ( 225) 740 160.5 2.3e-37
gi|194149713|gb|EDW65404.1| GJ18919 [Drosophila vi ( 229) 738 160.0 3e-37
gi|193901559|gb|EDW00426.1| GH12858 [Drosophila gr ( 229) 734 159.2 5.4e-37
gi|193908415|gb|EDW07282.1| GI14949 [Drosophila mo ( 222) 731 158.6 8e-37
gi|223634478|gb|ACN09816.1| GH27649p [Drosophila m ( 263) 729 158.3 1.2e-36
gi|190650402|gb|EDV47680.1| GG17497 [Drosophila er ( 222) 728 158.0 1.2e-36
gi|21429138|gb|AAM50288.1| RE42508p [Drosophila me ( 222) 727 157.8 1.4e-36
gi|194189572|gb|EDX03156.1| GE15254 [Drosophila ya ( 222) 727 157.8 1.4e-36
gi|220901851|gb|EAA46055.3| Rab21, isoform C [Dros ( 222) 725 157.4 1.9e-36
gi|198146025|gb|EDY72428.1| GA22589 [Drosophila ps ( 224) 724 157.2 2.2e-36
gi|162682061|gb|EDQ68482.1| Rab21-family small GTP ( 222) 723 157.0 2.5e-36
gi|194129619|gb|EDW51662.1| GM10050 [Drosophila se ( 224) 723 157.0 2.5e-36
gi|194160261|gb|EDW75162.1| GK20025 [Drosophila wi ( 230) 723 157.0 2.6e-36
gi|194104976|gb|EDW27019.1| GL16463 [Drosophila pe ( 223) 720 156.4 3.8e-36
>>gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full=Ras- (222 aa)
initn: 1464 init1: 1464 opt: 1464 Z-score: 1628.2 bits: 308.6 E(): 5.5e-82
Smith-Waterman score: 1464; 100.000% identity (100.000% similar) in 222 aa overlap (32-253:1-222)
10 20 30 40 50 60
mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
::::::::::::::::::::::::::::::
gi|465 MAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
10 20 30
70 80 90 100 110 120
mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
160 170 180 190 200 210
250
mKIAA0 QAQSSGGCCSSG
::::::::::::
gi|465 QAQSSGGCCSSG
220
>>gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ras-re (223 aa)
initn: 1455 init1: 1421 opt: 1452 Z-score: 1614.9 bits: 306.2 E(): 3e-81
Smith-Waterman score: 1452; 99.552% identity (99.552% similar) in 223 aa overlap (32-253:1-223)
10 20 30 40 50 60
mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
::::::::::::::::::::::::::::::
gi|818 MAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
10 20 30
70 80 90 100 110 120
mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
160 170 180 190 200 210
250
mKIAA0 QAQS-SGGCCSSG
:::: ::::::::
gi|818 QAQSGSGGCCSSG
220
>>gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=Ras-r (223 aa)
initn: 1487 init1: 1412 opt: 1430 Z-score: 1590.6 bits: 301.7 E(): 6.9e-80
Smith-Waterman score: 1430; 97.309% identity (99.103% similar) in 223 aa overlap (32-253:1-223)
10 20 30 40 50 60
mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
:::::::...::::::::::::::::::::
gi|250 MAAAGGGGGGAAGRAYSFKVVLLGEGCVGK
10 20 30
70 80 90 100 110 120
mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|250 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|250 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
gi|250 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEP
160 170 180 190 200 210
250
mKIAA0 QAQSSGG-CCSSG
::::::: :::::
gi|250 QAQSSGGGCCSSG
220
>>gi|109097798|ref|XP_001117520.1| PREDICTED: similar to (223 aa)
initn: 1438 init1: 1406 opt: 1424 Z-score: 1584.0 bits: 300.4 E(): 1.6e-79
Smith-Waterman score: 1424; 96.861% identity (99.103% similar) in 223 aa overlap (32-253:1-223)
10 20 30 40 50 60
mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
::::::..::::::::::::::::::::::
gi|109 MAAAGGSGAAAAGRAYSFKVVLLGEGCVGK
10 20 30
70 80 90 100 110 120
mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
::::::::::::::::::::::::::::::::::::::::::::: :.::::::::::::
gi|109 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEP
160 170 180 190 200 210
250
mKIAA0 QAQSSGG-CCSSG
:::.::: :::::
gi|109 QAQTSGGGCCSSG
220
>>gi|114645863|ref|XP_522469.2| PREDICTED: similar to GT (224 aa)
initn: 1473 init1: 1402 opt: 1420 Z-score: 1579.5 bits: 299.6 E(): 2.8e-79
Smith-Waterman score: 1420; 96.847% identity (99.099% similar) in 222 aa overlap (33-253:3-224)
10 20 30 40 50 60
mKIAA0 RAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGKT
::.:::.:::::::::::::::::::::::
gi|114 MAAAGGGGGAAAAGRAYSFKVVLLGEGCVGKT
10 20 30
70 80 90 100 110 120
mKIAA0 SLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSN
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 GAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAES
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAES
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 VGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEPQ
:::::::::::::::::::::::::::::::::::::::::::: :.:::::::::::::
gi|114 VGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQ
160 170 180 190 200 210
250
mKIAA0 AQSSGG-CCSSG
::.::: :::::
gi|114 AQTSGGGCCSSG
220
>>gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full=Ras- (225 aa)
initn: 1536 init1: 1392 opt: 1418 Z-score: 1577.3 bits: 299.2 E(): 3.8e-79
Smith-Waterman score: 1418; 96.444% identity (98.222% similar) in 225 aa overlap (32-253:1-225)
10 20 30 40 50
mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGA--AAAAGRAYSFKVVLLGEGCV
:::::::. ::::::::::::::::::::
gi|136 MAAAGGGGGGAAAAGRAYSFKVVLLGEGCV
10 20 30
60 70 80 90 100 110
mKIAA0 GKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|136 GKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYR
40 50 60 70 80 90
120 130 140 150 160 170
mKIAA0 DSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESY
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
gi|136 DSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESY
100 110 120 130 140 150
180 190 200 210 220 230
mKIAA0 AESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDD
::::::::::::::::::::::::::::::::::::::::::::::: :.::::::::::
gi|136 AESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDD
160 170 180 190 200 210
240 250
mKIAA0 EPQAQSSGG-CCSSG
:::::.::: :::::
gi|136 EPQAQTSGGGCCSSG
220
>>gi|126339429|ref|XP_001370428.1| PREDICTED: similar to (227 aa)
initn: 1406 init1: 1406 opt: 1415 Z-score: 1573.9 bits: 298.6 E(): 5.8e-79
Smith-Waterman score: 1415; 93.805% identity (97.788% similar) in 226 aa overlap (28-253:5-227)
10 20 30 40 50 60
mKIAA0 KSRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVG
.::: .::::.:..:::::::::::::::::
gi|126 MAAAAGGG---GGGGAGASGGRAYSFKVVLLGEGCVG
10 20 30
70 80 90 100 110 120
mKIAA0 KTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 KTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRD
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 SNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYA
:::::::::.::::::::::::::::::::::::::::::::::::::::::.::::.::
gi|126 SNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYA
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 ESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDE
:::::::::::::::::::::::::::::::::::::::::::::: : :::::::::::
gi|126 ESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQQGMARRGVQIIDDE
160 170 180 190 200 210
250
mKIAA0 PQAQSSGGCCSSG
::.::::::::::
gi|126 PQGQSSGGCCSSG
220
>>gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full=Ras (222 aa)
initn: 1431 init1: 1384 opt: 1412 Z-score: 1570.7 bits: 298.0 E(): 8.8e-79
Smith-Waterman score: 1412; 96.413% identity (98.655% similar) in 223 aa overlap (32-253:1-222)
10 20 30 40 50 60
mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
:::::::.::: ::.:::::::::::::::
gi|122 MAAAGGGGAAA-GRTYSFKVVLLGEGCVGK
10 20
70 80 90 100 110 120
mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|122 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
30 40 50 60 70 80
130 140 150 160 170 180
mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
::::::::.::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|122 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAE
90 100 110 120 130 140
190 200 210 220 230 240
mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
gi|122 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEP
150 160 170 180 190 200
250
mKIAA0 QAQS-SGGCCSSG
:::: .:::::::
gi|122 QAQSVGGGCCSSG
210 220
>>gi|194037756|ref|XP_001925094.1| PREDICTED: similar to (222 aa)
initn: 1473 init1: 1379 opt: 1410 Z-score: 1568.5 bits: 297.6 E(): 1.2e-78
Smith-Waterman score: 1410; 96.861% identity (98.655% similar) in 223 aa overlap (32-253:1-222)
10 20 30 40 50 60
mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK
:::::::.:::: :::::::::::::::::
gi|194 MAAAGGGGAAAA-RAYSFKVVLLGEGCVGK
10 20
70 80 90 100 110 120
mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS
30 40 50 60 70 80
130 140 150 160 170 180
mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE
90 100 110 120 130 140
190 200 210 220 230 240
mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP
::::::::::::::::::::::::::::::::::::::::::::: ::.:::::::::::
gi|194 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGATRRGVQIIDDEP
150 160 170 180 190 200
250
mKIAA0 QAQSSGG-CCSSG
::::.:: :::::
gi|194 QAQSGGGGCCSSG
210 220
>>gi|118082329|ref|XP_001233648.1| PREDICTED: similar to (220 aa)
initn: 1389 init1: 1389 opt: 1390 Z-score: 1546.4 bits: 293.5 E(): 2e-77
Smith-Waterman score: 1390; 94.545% identity (99.091% similar) in 220 aa overlap (34-253:2-220)
10 20 30 40 50 60
mKIAA0 AREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGKTS
::: ::::. ::..::::::::::::::::
gi|118 MAAGTGAAAG-GRSFSFKVVLLGEGCVGKTS
10 20 30
70 80 90 100 110 120
mKIAA0 LVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 LVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNG
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 AILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESV
::::::.::::::::::::::::::::::::::::::::::::::::::.::::.:::::
gi|118 AILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYAESV
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 GAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEPQA
::::::::::::::::::::::::::::::::::::.::::::.:.:::::::::::::.
gi|118 GAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSSQSGTARRGVQIIDDEPQV
160 170 180 190 200 210
250
mKIAA0 QSSGGCCSSG
::::::::::
gi|118 QSSGGCCSSG
220
253 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Thu Mar 12 22:47:39 2009 done: Thu Mar 12 22:52:51 2009
Total Scan time: 733.650 Total Display time: 0.040
Function used was FASTA [version 34.26.5 April 26, 2007]