# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mni13228.fasta.nr -Q ../query/mKIAA0118.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0118, 253 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7908268 sequences Expectation_n fit: rho(ln(x))= 5.0937+/-0.000187; mu= 9.7564+/- 0.010 mean_var=81.7223+/-15.704, 0's: 39 Z-trim: 128 B-trim: 0 in 0/65 Lambda= 0.141874 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full= ( 222) 1464 308.6 5.5e-82 gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ra ( 223) 1452 306.2 3e-81 gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=R ( 223) 1430 301.7 6.9e-80 gi|109097798|ref|XP_001117520.1| PREDICTED: simila ( 223) 1424 300.4 1.6e-79 gi|114645863|ref|XP_522469.2| PREDICTED: similar t ( 224) 1420 299.6 2.8e-79 gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full= ( 225) 1418 299.2 3.8e-79 gi|126339429|ref|XP_001370428.1| PREDICTED: simila ( 227) 1415 298.6 5.8e-79 gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full ( 222) 1412 298.0 8.8e-79 gi|194037756|ref|XP_001925094.1| PREDICTED: simila ( 222) 1410 297.6 1.2e-78 gi|118082329|ref|XP_001233648.1| PREDICTED: simila ( 220) 1390 293.5 2e-77 gi|224094073|ref|XP_002192267.1| PREDICTED: simila ( 220) 1384 292.3 4.6e-77 gi|89266851|emb|CAJ82566.1| RAB21, member RAS onco ( 221) 1380 291.4 8.2e-77 gi|38014530|gb|AAH60498.1| MGC68816 protein [Xenop ( 221) 1380 291.4 8.2e-77 gi|47212281|emb|CAF89513.1| unnamed protein produc ( 217) 1287 272.4 4.4e-71 gi|115313619|gb|AAI24523.1| Zgc:154045 [Danio reri ( 216) 1282 271.4 8.8e-71 gi|149743106|ref|XP_001490458.1| PREDICTED: simila ( 181) 1111 236.3 2.7e-60 gi|73535741|pdb|1YZT|A Chain A, Gppnhp-Bound Rab21 ( 184) 1110 236.1 3.1e-60 gi|73535743|pdb|1YZU|A Chain A, Gppnhp-Bound Rab21 ( 170) 1107 235.5 4.5e-60 gi|73535747|pdb|1Z08|A Chain A, Gppnhp-Bound Rab21 ( 170) 1098 233.6 1.6e-59 gi|198418761|ref|XP_002119635.1| PREDICTED: simila ( 218) 1043 222.5 4.7e-56 gi|215493921|gb|EEC03562.1| RAS-related protein, p ( 215) 1034 220.6 1.7e-55 gi|190579637|gb|EDV19728.1| hypothetical protein T ( 209) 1026 219.0 5.1e-55 gi|156213990|gb|EDO34991.1| predicted protein [Nem ( 216) 1023 218.4 8e-55 gi|149898836|gb|ABR27886.1| Ras-related small GTPa ( 218) 989 211.4 1e-52 gi|193654889|ref|XP_001948825.1| PREDICTED: simila ( 226) 987 211.0 1.4e-52 gi|156547415|ref|XP_001604485.1| PREDICTED: simila ( 222) 964 206.3 3.5e-51 gi|91078236|ref|XP_966494.1| PREDICTED: similar to ( 216) 926 198.5 7.6e-49 gi|212517295|gb|EEB19206.1| rab21, putative [Pedic ( 218) 897 192.6 4.7e-47 gi|30580479|sp|Q8WQ53|RAB21_GEOCY Ras-related prot ( 229) 856 184.2 1.6e-44 gi|166208512|sp|P34142.2|RAB21_DICDI RecName: Full ( 212) 845 181.9 7.3e-44 gi|66548006|ref|XP_393353.2| PREDICTED: similar to ( 222) 844 181.7 8.7e-44 gi|304604|gb|AAC37383.1| RabB gi|739977|prf||2 ( 213) 834 179.7 3.5e-43 gi|89258431|gb|ABD65439.1| Rab21 [Suberites domunc ( 222) 833 179.5 4.2e-43 gi|72132814|ref|XP_793125.1| PREDICTED: similar to ( 180) 795 171.6 7.9e-41 gi|221126548|ref|XP_002167019.1| PREDICTED: simila ( 138) 770 166.4 2.2e-39 gi|158596123|gb|EDP34522.1| ras-related protein Ra ( 219) 747 161.9 8.2e-38 gi|190617160|gb|EDV32684.1| GF22152 [Drosophila an ( 225) 740 160.5 2.3e-37 gi|194149713|gb|EDW65404.1| GJ18919 [Drosophila vi ( 229) 738 160.0 3e-37 gi|193901559|gb|EDW00426.1| GH12858 [Drosophila gr ( 229) 734 159.2 5.4e-37 gi|193908415|gb|EDW07282.1| GI14949 [Drosophila mo ( 222) 731 158.6 8e-37 gi|223634478|gb|ACN09816.1| GH27649p [Drosophila m ( 263) 729 158.3 1.2e-36 gi|190650402|gb|EDV47680.1| GG17497 [Drosophila er ( 222) 728 158.0 1.2e-36 gi|21429138|gb|AAM50288.1| RE42508p [Drosophila me ( 222) 727 157.8 1.4e-36 gi|194189572|gb|EDX03156.1| GE15254 [Drosophila ya ( 222) 727 157.8 1.4e-36 gi|220901851|gb|EAA46055.3| Rab21, isoform C [Dros ( 222) 725 157.4 1.9e-36 gi|198146025|gb|EDY72428.1| GA22589 [Drosophila ps ( 224) 724 157.2 2.2e-36 gi|162682061|gb|EDQ68482.1| Rab21-family small GTP ( 222) 723 157.0 2.5e-36 gi|194129619|gb|EDW51662.1| GM10050 [Drosophila se ( 224) 723 157.0 2.5e-36 gi|194160261|gb|EDW75162.1| GK20025 [Drosophila wi ( 230) 723 157.0 2.6e-36 gi|194104976|gb|EDW27019.1| GL16463 [Drosophila pe ( 223) 720 156.4 3.8e-36 >>gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full=Ras- (222 aa) initn: 1464 init1: 1464 opt: 1464 Z-score: 1628.2 bits: 308.6 E(): 5.5e-82 Smith-Waterman score: 1464; 100.000% identity (100.000% similar) in 222 aa overlap (32-253:1-222) 10 20 30 40 50 60 mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK :::::::::::::::::::::::::::::: gi|465 MAAAGGGAAAAAGRAYSFKVVLLGEGCVGK 10 20 30 70 80 90 100 110 120 mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP 160 170 180 190 200 210 250 mKIAA0 QAQSSGGCCSSG :::::::::::: gi|465 QAQSSGGCCSSG 220 >>gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ras-re (223 aa) initn: 1455 init1: 1421 opt: 1452 Z-score: 1614.9 bits: 306.2 E(): 3e-81 Smith-Waterman score: 1452; 99.552% identity (99.552% similar) in 223 aa overlap (32-253:1-223) 10 20 30 40 50 60 mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK :::::::::::::::::::::::::::::: gi|818 MAAAGGGAAAAAGRAYSFKVVLLGEGCVGK 10 20 30 70 80 90 100 110 120 mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP 160 170 180 190 200 210 250 mKIAA0 QAQS-SGGCCSSG :::: :::::::: gi|818 QAQSGSGGCCSSG 220 >>gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=Ras-r (223 aa) initn: 1487 init1: 1412 opt: 1430 Z-score: 1590.6 bits: 301.7 E(): 6.9e-80 Smith-Waterman score: 1430; 97.309% identity (99.103% similar) in 223 aa overlap (32-253:1-223) 10 20 30 40 50 60 mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK :::::::...:::::::::::::::::::: gi|250 MAAAGGGGGGAAGRAYSFKVVLLGEGCVGK 10 20 30 70 80 90 100 110 120 mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|250 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEP 160 170 180 190 200 210 250 mKIAA0 QAQSSGG-CCSSG ::::::: ::::: gi|250 QAQSSGGGCCSSG 220 >>gi|109097798|ref|XP_001117520.1| PREDICTED: similar to (223 aa) initn: 1438 init1: 1406 opt: 1424 Z-score: 1584.0 bits: 300.4 E(): 1.6e-79 Smith-Waterman score: 1424; 96.861% identity (99.103% similar) in 223 aa overlap (32-253:1-223) 10 20 30 40 50 60 mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK ::::::..:::::::::::::::::::::: gi|109 MAAAGGSGAAAAGRAYSFKVVLLGEGCVGK 10 20 30 70 80 90 100 110 120 mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP ::::::::::::::::::::::::::::::::::::::::::::: :.:::::::::::: gi|109 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEP 160 170 180 190 200 210 250 mKIAA0 QAQSSGG-CCSSG :::.::: ::::: gi|109 QAQTSGGGCCSSG 220 >>gi|114645863|ref|XP_522469.2| PREDICTED: similar to GT (224 aa) initn: 1473 init1: 1402 opt: 1420 Z-score: 1579.5 bits: 299.6 E(): 2.8e-79 Smith-Waterman score: 1420; 96.847% identity (99.099% similar) in 222 aa overlap (33-253:3-224) 10 20 30 40 50 60 mKIAA0 RAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGKT ::.:::.::::::::::::::::::::::: gi|114 MAAAGGGGGAAAAGRAYSFKVVLLGEGCVGKT 10 20 30 70 80 90 100 110 120 mKIAA0 SLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 GAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAES :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAES 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 VGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEPQ :::::::::::::::::::::::::::::::::::::::::::: :.::::::::::::: gi|114 VGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQ 160 170 180 190 200 210 250 mKIAA0 AQSSGG-CCSSG ::.::: ::::: gi|114 AQTSGGGCCSSG 220 >>gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full=Ras- (225 aa) initn: 1536 init1: 1392 opt: 1418 Z-score: 1577.3 bits: 299.2 E(): 3.8e-79 Smith-Waterman score: 1418; 96.444% identity (98.222% similar) in 225 aa overlap (32-253:1-225) 10 20 30 40 50 mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGA--AAAAGRAYSFKVVLLGEGCV :::::::. :::::::::::::::::::: gi|136 MAAAGGGGGGAAAAGRAYSFKVVLLGEGCV 10 20 30 60 70 80 90 100 110 mKIAA0 GKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 GKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYR 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA0 DSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESY ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 DSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESY 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA0 AESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDD ::::::::::::::::::::::::::::::::::::::::::::::: :.:::::::::: gi|136 AESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDD 160 170 180 190 200 210 240 250 mKIAA0 EPQAQSSGG-CCSSG :::::.::: ::::: gi|136 EPQAQTSGGGCCSSG 220 >>gi|126339429|ref|XP_001370428.1| PREDICTED: similar to (227 aa) initn: 1406 init1: 1406 opt: 1415 Z-score: 1573.9 bits: 298.6 E(): 5.8e-79 Smith-Waterman score: 1415; 93.805% identity (97.788% similar) in 226 aa overlap (28-253:5-227) 10 20 30 40 50 60 mKIAA0 KSRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVG .::: .::::.:..::::::::::::::::: gi|126 MAAAAGGG---GGGGAGASGGRAYSFKVVLLGEGCVG 10 20 30 70 80 90 100 110 120 mKIAA0 KTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRD 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 SNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYA :::::::::.::::::::::::::::::::::::::::::::::::::::::.::::.:: gi|126 SNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYA 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 ESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDE :::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::: gi|126 ESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQQGMARRGVQIIDDE 160 170 180 190 200 210 250 mKIAA0 PQAQSSGGCCSSG ::.:::::::::: gi|126 PQGQSSGGCCSSG 220 >>gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full=Ras (222 aa) initn: 1431 init1: 1384 opt: 1412 Z-score: 1570.7 bits: 298.0 E(): 8.8e-79 Smith-Waterman score: 1412; 96.413% identity (98.655% similar) in 223 aa overlap (32-253:1-222) 10 20 30 40 50 60 mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK :::::::.::: ::.::::::::::::::: gi|122 MAAAGGGGAAA-GRTYSFKVVLLGEGCVGK 10 20 70 80 90 100 110 120 mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS 30 40 50 60 70 80 130 140 150 160 170 180 mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE ::::::::.::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|122 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAE 90 100 110 120 130 140 190 200 210 220 230 240 mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|122 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEP 150 160 170 180 190 200 250 mKIAA0 QAQS-SGGCCSSG :::: .::::::: gi|122 QAQSVGGGCCSSG 210 220 >>gi|194037756|ref|XP_001925094.1| PREDICTED: similar to (222 aa) initn: 1473 init1: 1379 opt: 1410 Z-score: 1568.5 bits: 297.6 E(): 1.2e-78 Smith-Waterman score: 1410; 96.861% identity (98.655% similar) in 223 aa overlap (32-253:1-222) 10 20 30 40 50 60 mKIAA0 SRAREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGK :::::::.:::: ::::::::::::::::: gi|194 MAAAGGGGAAAA-RAYSFKVVLLGEGCVGK 10 20 70 80 90 100 110 120 mKIAA0 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDS 30 40 50 60 70 80 130 140 150 160 170 180 mKIAA0 NGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAE 90 100 110 120 130 140 190 200 210 220 230 240 mKIAA0 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEP ::::::::::::::::::::::::::::::::::::::::::::: ::.::::::::::: gi|194 SVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGATRRGVQIIDDEP 150 160 170 180 190 200 250 mKIAA0 QAQSSGG-CCSSG ::::.:: ::::: gi|194 QAQSGGGGCCSSG 210 220 >>gi|118082329|ref|XP_001233648.1| PREDICTED: similar to (220 aa) initn: 1389 init1: 1389 opt: 1390 Z-score: 1546.4 bits: 293.5 E(): 2e-77 Smith-Waterman score: 1390; 94.545% identity (99.091% similar) in 220 aa overlap (34-253:2-220) 10 20 30 40 50 60 mKIAA0 AREERAPRRRRCGVRRGAGLGRRGSGGGMAAAGGGAAAAAGRAYSFKVVLLGEGCVGKTS ::: ::::. ::..:::::::::::::::: gi|118 MAAGTGAAAG-GRSFSFKVVLLGEGCVGKTS 10 20 30 70 80 90 100 110 120 mKIAA0 LVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 LVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 AILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESV ::::::.::::::::::::::::::::::::::::::::::::::::::.::::.::::: gi|118 AILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYAESV 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 GAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEPQA ::::::::::::::::::::::::::::::::::::.::::::.:.:::::::::::::. gi|118 GAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSSQSGTARRGVQIIDDEPQV 160 170 180 190 200 210 250 mKIAA0 QSSGGCCSSG :::::::::: gi|118 QSSGGCCSSG 220 253 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:47:39 2009 done: Thu Mar 12 22:52:51 2009 Total Scan time: 733.650 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]