Comparison of KIAA cDNA sequences between mouse and human (KIAA0106)
<<Original sequence data>>
mouse mKIAA0106 (mni09115) length: 1394 bp, CDS: 3 - 686
human KIAA0106 (ha00683) length: 1653 bp, CDS: 2 - 718
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 33 - 34 1 1 50.0
CDS: 35 - 718 597 87 12.7
3'UTR: 719 - 1689 441 252 36.4
amino acid
CDS: 35 - 718 204 24 10.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
T A A M P G
mni09115 1 ................................CCACTGCCGCCATGCCCG 18
||| | |||||||||||
ha00683 1 CGGTTGCTTGCTGTCCCAGCGGCGCCCCCTCATCACCGTCGCCATGCCCG 50
G C L L S Q R R P L I T V A M P G
51 ----+----*----+----*----+----*----+----*----+----* 100
G L L L G D E A P N F E A N T T
mni09115 19 GAGGGTTGCTTCTCGGGGACGAAGCCCCCAACTTTGAGGCCAATACCACC 68
|||| ||||||||||||||| || ||||||||||||||||||||||||
ha00683 51 GAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACC 100
G L L L G D V A P N F E A N T T
101 ----+----*----+----*----+----*----+----*----+----* 150
I G R I R F H D F L G D S W G I L
mni09115 69 ATCGGCCGCATCCGCTTCCACGATTTCCTGGGAGATTCATGGGGCATTCT 118
||||||||||||| |||||||| || |||||||| ||||||||||||||
ha00683 101 GTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCATGGGGCATTCT 150
V G R I R F H D F L G D S W G I L
151 ----+----*----+----*----+----*----+----*----+----* 200
F S H P R D F T P V C T T E L G R
mni09115 119 CTTTTCCCACCCACGGGACTTTACCCCAGTGTGCACCACAGAACTTGGCA 168
||| |||||||| ||||||||||||||||||||||||||||| |||||||
ha00683 151 CTTCTCCCACCCTCGGGACTTTACCCCAGTGTGCACCACAGAGCTTGGCA 200
F S H P R D F T P V C T T E L G R
201 ----+----*----+----*----+----*----+----*----+----* 250
A A K L A P E F A K R N V K L I
mni09115 169 GAGCTGCAAAGCTGGCGCCAGAGTTTGCCAAGAGGAATGTTAAGTTGATT 218
|||||||||||||||| ||||| |||||||||||||||||||||||||||
ha00683 201 GAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATT 250
A A K L A P E F A K R N V K L I
251 ----+----*----+----*----+----*----+----*----+----* 300
A L S I D S V E D H L A W S K D I
mni09115 219 GCTCTTTCAATAGACAGTGTTGAGGATCATCTTGCCTGGAGCAAGGACAT 268
|| ||||||||||||||||||||||| |||||||||||||||||||| ||
ha00683 251 GCCCTTTCAATAGACAGTGTTGAGGACCATCTTGCCTGGAGCAAGGATAT 300
A L S I D S V E D H L A W S K D I
301 ----+----*----+----*----+----*----+----*----+----* 350
N A Y N G E T P T E K L P F P I I
mni09115 269 CAATGCTTACAATGGTGAAACACCCACGGAAAAGTTGCCATTTCCCATCA 318
||||||||||||| ||||| ||||| |||||||| || ||||||||||
ha00683 301 CAATGCTTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCA 350
N A Y N C E E P T E K L P F P I I
351 ----+----*----+----*----+----*----+----*----+----* 400
D D K G R D L A I L L G M L D P
mni09115 319 TTGATGATAAGGGCAGGGACCTTGCCATCCTTTTGGGCATGTTGGATCCA 368
| ||||||| | |||| ||||||||||| ||||||||| ||||||||
ha00683 351 TCGATGATAGGAATCGGGAGCTTGCCATCCTGTTGGGCATGCTGGATCCA 400
D D R N R E L A I L L G M L D P
401 ----+----*----+----*----+----*----+----*----+----* 450
V E K D A N N M P V T A R V V F I
mni09115 369 GTCGAGAAGGACGCTAACAACATGCCTGTGACGGCCCGTGTGGTGTTCAT 418
| |||||||| | || |||||||||||| || ||||||||||| |
ha00683 401 GCAGAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTGGTGTTTGT 450
A E K D E K G M P V T A R V V F V
451 ----+----*----+----*----+----*----+----*----+----* 500
F G P D K K L K L S I L Y P A T T
mni09115 419 TTTTGGCCCTGACAAGAAACTGAAGCTGTCTATCCTCTACCCTGCCACCA 468
|||||| ||||| ||||| ||||||||||||||||||||||| || ||||
ha00683 451 TTTTGGTCCTGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCA 500
F G P D K K L K L S I L Y P A T T
501 ----+----*----+----*----+----*----+----*----+----* 550
G R N F D E I L R V V D S L Q L
mni09115 469 CGGGCAGGAACTTTGATGAGATTCTCAGAGTGGTTGACTCTCTCCAGCTG 518
| |||||||||||||||||||||||||| || || |||||||||||||
ha00683 501 CTGGCAGGAACTTTGATGAGATTCTCAGGGTAGTCATCTCTCTCCAGCTG 550
G R N F D E I L R V V I S L Q L
551 ----+----*----+----*----+----*----+----*----+----* 600
T G T K P V A T P V D W K K G E S
mni09115 519 ACAGGCACAAAGCCGGTTGCCACCCCAGTTGACTGGAAGAAGGGAGAGAG 568
|||| ||| |||||||||||||||||| |||||| | || || ||
ha00683 551 ACAGCAGAAAAAAGGGTTGCCACCCCAGTTGATTGGAAGGATGGGGATAG 600
T A E K R V A T P V D W K D G D S
601 ----+----*----+----*----+----*----+----*----+----* 650
V M V V P T L S E E E A K Q C F P
mni09115 569 CGTGATGGTAGTTCCCACCCTCTCCGAAGAGGAAGCCAAACAATGTTTCC 618
|||||||| |||| ||| || | ||||| ||||||||| || |||||
ha00683 601 TGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAACTTTTCC 650
V M V L P T I P E E E A K K L F P
651 ----+----*----+----*----+----*----+----*----+----* 700
K G V F T K E L P S G K K Y L R
mni09115 619 CTAAAGGAGTCTTCACCAAAGAGCTCCCGTCTGGCAAAAAATACCTCCGT 668
| |||||||||||||||||||||||||| |||||||| |||||||||||
ha00683 651 CGAAAGGAGTCTTCACCAAAGAGCTCCCATCTGGCAAGAAATACCTCCGC 700
K G V F T K E L P S G K K Y L R
701 ----+----*----+----*----+----*----+----*----+----* 750
Y T P Q P *
mni09115 669 TATACACCCCAGCCTTAAGTCT.TTGCGGAAATTGGGGCTGCATCTGCAC 717
|| ||||||||||||||||||| ||| ||| |||| ||||
ha00683 701 TACACACCCCAGCCTTAAGTCTCTTGGAGAAGTTGGTGCTG......... 741
Y T P Q P *
751 ----+----*----+----*----+----*----+----*----+----* 800
mni09115 718 ATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCA 767
| ||| |||||||||||||| || ||| | | ||||
ha00683 742 ..........TGAGCCAGAGGATGTCAGCTGCCAATTGTGTTTTCCTGCA 781
801 ----+----*----+----*----+----*----+----*----+----* 850
mni09115 768 GCAGGTCCGTAGAAAGATCGTGGCATGATCACAGCCGGTCCTGTAGATCG 817
||| ||| || | | ||| ||| | ||||||||| || | |
ha00683 782 GCAATTCCATAAACACATCCTGGTGTCATCACAGCC...AAGGTTTTTAG 828
851 ----+----*----+----*----+----*----+----*----+----* 900
mni09115 818 CTCGCTATACTACTGGGTCATTAAATGGAAATGGCACCAAAACCTTCTCG 867
| ||||||| | ||| | |||||||| ||||||||| |||| |||| |
ha00683 829 GTTGCTATACCAATGGCTTATTAAATGAAAATGGCACTAAAAGTTTCTTG 878
901 ----+----*----+----*----+----*----+----*----+----* 950
mni09115 868 GGATTCTT..TACTCTGTGCCTTCGCCAGCATTCTGCCCCTCTGCCTGTC 915
||||||| |||||| ||||||| || | | || ||
ha00683 879 AGATTCTTTATACTCTCTGCCTTCAGCA.........ATCAATTCCATTC 919
951 ----+----*----+----*----+----*----+----*----+----* 1000
mni09115 916 ACAGTGCCCTACT.GACTGGCTCTCTTTGAAACGAATTATGTATTGAAGA 964
| | | ||| |||| ||| ||||||| || |||||| || |
ha00683 920 ATACATCAGCACTCTGCTGGTTCTGTTTGAAATATGTTCTGTATTTAAAA 969
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mni09115 965 TTC.......CTTAGGTCTCTGTAGGGTCTTTGATCAGCAAACAAGGTAG 1007
|| || | |||||| |||| | ||| || ||
ha00683 970 CTCAAATCTTGTTGGATCTCTGCAGGGCTTGTGACCAATGAAGTCATATT 1019
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mni09115 1008 TGTCAGTG...............TGGGCTCTGTGCTAGAATGA.TGAAAC 1041
||| || | ||| | ||||||| | |
ha00683 1020 TGTTGATGGTTGACAAAGCTTGCTTCACTCCATCAGAGAATGACTATCAA 1069
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mni09115 1042 ACCTTTTGTATCTTTCCGA..ACTGAATCTTCTGTTACCCATTTTGGAGA 1089
|||| || || ||| | || ||| |||| |||||||||| |||
ha00683 1070 TTTTTTTTTAACTGTCCTATCACGTCCTCTCCTGTCACCCATTTTGAAGA 1119
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mni09115 1090 GCACTGACATAGGGAGAAGCTTTCGATTCTGT.................. 1121
| || || | |||| | | || |
ha00683 1120 G...TGGCAGAACTTGAAGTTCAACTTCCTCTGTAAATATCCAAGTATAA 1166
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mni09115 1122 .................................................. 1122
ha00683 1167 AGCCCAGGAACTTCTAGAATAACCCAGATGCGCTTTAATTTTTTTTAATA 1216
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mni09115 1122 ...........................................ATTTTTA 1128
|| ||
ha00683 1217 TGTTTTGATCACAGAACTTCTAGAATAACCCAGATGCTCTTTCATATTCT 1266
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mni09115 1129 GTAAATAAAAAGTGGGGACAGCCGGGAGAA.................... 1158
| |||| | || ||||| ||| |||
ha00683 1267 TTTAATACATCTTGATCACAGCTGGGGGAAAAAAAGCTTTTTAATTCTGT 1316
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mni09115 1159 .................................................. 1159
ha00683 1317 ACCTTCCTAGTAGATAAGTGAAGAGCAGGGAAAGAGACCTTTAAATATTT 1366
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mni09115 1159 TTCTTACAGGGAATCTATTGTAAGTTTCTATCGAAGTGGGCTCA...... 1202
| || | ||| | | |||||||||||| || |||| |
ha00683 1367 TGCTATAAAAAAATTTGTGATAAGTTTCTATCAAAATGGGGAGATTGCAG 1416
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mni09115 1203 GAAAGCCTT...TCGCCTCCCAAGAGTGCG.................... 1229
|||| ||| | | |||||||| | |
ha00683 1417 AAAAGGCTTCCCTTGGCTCCCAAGGAGGTGTAGCAGGTGTGAGCAATATT 1466
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mni09115 1230 .....CATGTACCT....CCTAGAGTTTCCA......CATCTGCTCTCTG 1264
||||| ||| | || |||| || |||| | || |
ha00683 1467 AGTGCCATGTGCCTTTCACACAGGGTTTGCATTTATCAGTCTGTTTTCCG 1516
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mni09115 1265 GTGATGTCTGCCTGTGAACGCACCTTAT........AAAAGACGGGCGGT 1306
|||||| | | || | | || || || ||| |
ha00683 1517 ATGATGTGTACATGAAAGAGTACACCATGTGAAGAGAAGAGAGAATGATT 1566
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mni09115 1307 GACAGTGTTTTACCA.CTCAGTGTCCTAGTAGTGGGTGGCCA.TTTCTGA 1354
|| | ||||||| | | | | || | ||||||| || | |||||
ha00683 1567 GAAAATGTTTTAGTATAGAACTCTTCTTGCAGTGGGTTGCTATTTTCTAG 1616
1651 ----+----*----+----*----+----*----+----* 1690
mni09115 1355 ATTCTGCTTTTTGAGGTTCAACAAATAAAATCCTGATCAG 1394
||| | |||||| || || ||||||||||||
ha00683 1617 ATTTTACTTTTTAGGGAACA..AAATAAAATCCTTTGTT. 1653