Comparison of KIAA cDNA sequences between mouse and human (KIAA0106)

<<Original sequence data>>

mouse  mKIAA0106 (mni09115)     length:   1394 bp, CDS:     3 -   686
human   KIAA0106  (ha00683)     length:   1653 bp, CDS:     2 -   718

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     33 -    34       1        1      50.0
  CDS:     35 -   718     597       87      12.7
3'UTR:    719 -  1689     441      252      36.4

amino acid

  CDS:     35 -   718     204       24      10.5
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
                                                 T  A  A  M  P  G
mni09115     1 ................................CCACTGCCGCCATGCCCG 18
                                                ||| | |||||||||||
ha00683      1 CGGTTGCTTGCTGTCCCAGCGGCGCCCCCTCATCACCGTCGCCATGCCCG 50
                G  C  L  L  S  Q  R  R  P  L  I  T  V  A  M  P  G

            51 ----+----*----+----*----+----*----+----*----+----* 100
                 G  L  L  L  G  D  E  A  P  N  F  E  A  N  T  T  
mni09115    19 GAGGGTTGCTTCTCGGGGACGAAGCCCCCAACTTTGAGGCCAATACCACC 68
               ||||  |||||||||||||||  || ||||||||||||||||||||||||
ha00683     51 GAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACC 100
                 G  L  L  L  G  D  V  A  P  N  F  E  A  N  T  T  

           101 ----+----*----+----*----+----*----+----*----+----* 150
               I  G  R  I  R  F  H  D  F  L  G  D  S  W  G  I  L 
mni09115    69 ATCGGCCGCATCCGCTTCCACGATTTCCTGGGAGATTCATGGGGCATTCT 118
                ||||||||||||| |||||||| || |||||||| ||||||||||||||
ha00683    101 GTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCATGGGGCATTCT 150
               V  G  R  I  R  F  H  D  F  L  G  D  S  W  G  I  L 

           151 ----+----*----+----*----+----*----+----*----+----* 200
                F  S  H  P  R  D  F  T  P  V  C  T  T  E  L  G  R
mni09115   119 CTTTTCCCACCCACGGGACTTTACCCCAGTGTGCACCACAGAACTTGGCA 168
               ||| |||||||| ||||||||||||||||||||||||||||| |||||||
ha00683    151 CTTCTCCCACCCTCGGGACTTTACCCCAGTGTGCACCACAGAGCTTGGCA 200
                F  S  H  P  R  D  F  T  P  V  C  T  T  E  L  G  R

           201 ----+----*----+----*----+----*----+----*----+----* 250
                 A  A  K  L  A  P  E  F  A  K  R  N  V  K  L  I  
mni09115   169 GAGCTGCAAAGCTGGCGCCAGAGTTTGCCAAGAGGAATGTTAAGTTGATT 218
               |||||||||||||||| ||||| |||||||||||||||||||||||||||
ha00683    201 GAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATT 250
                 A  A  K  L  A  P  E  F  A  K  R  N  V  K  L  I  

           251 ----+----*----+----*----+----*----+----*----+----* 300
               A  L  S  I  D  S  V  E  D  H  L  A  W  S  K  D  I 
mni09115   219 GCTCTTTCAATAGACAGTGTTGAGGATCATCTTGCCTGGAGCAAGGACAT 268
               || ||||||||||||||||||||||| |||||||||||||||||||| ||
ha00683    251 GCCCTTTCAATAGACAGTGTTGAGGACCATCTTGCCTGGAGCAAGGATAT 300
               A  L  S  I  D  S  V  E  D  H  L  A  W  S  K  D  I 

           301 ----+----*----+----*----+----*----+----*----+----* 350
                N  A  Y  N  G  E  T  P  T  E  K  L  P  F  P  I  I
mni09115   269 CAATGCTTACAATGGTGAAACACCCACGGAAAAGTTGCCATTTCCCATCA 318
               ||||||||||||| |||||   ||||| |||||||| || ||||||||||
ha00683    301 CAATGCTTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCA 350
                N  A  Y  N  C  E  E  P  T  E  K  L  P  F  P  I  I

           351 ----+----*----+----*----+----*----+----*----+----* 400
                 D  D  K  G  R  D  L  A  I  L  L  G  M  L  D  P  
mni09115   319 TTGATGATAAGGGCAGGGACCTTGCCATCCTTTTGGGCATGTTGGATCCA 368
               | ||||||| |    |||| ||||||||||| ||||||||| ||||||||
ha00683    351 TCGATGATAGGAATCGGGAGCTTGCCATCCTGTTGGGCATGCTGGATCCA 400
                 D  D  R  N  R  E  L  A  I  L  L  G  M  L  D  P  

           401 ----+----*----+----*----+----*----+----*----+----* 450
               V  E  K  D  A  N  N  M  P  V  T  A  R  V  V  F  I 
mni09115   369 GTCGAGAAGGACGCTAACAACATGCCTGTGACGGCCCGTGTGGTGTTCAT 418
               |  |||||||| |  ||   |||||||||||| || |||||||||||  |
ha00683    401 GCAGAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTGGTGTTTGT 450
               A  E  K  D  E  K  G  M  P  V  T  A  R  V  V  F  V 

           451 ----+----*----+----*----+----*----+----*----+----* 500
                F  G  P  D  K  K  L  K  L  S  I  L  Y  P  A  T  T
mni09115   419 TTTTGGCCCTGACAAGAAACTGAAGCTGTCTATCCTCTACCCTGCCACCA 468
               |||||| ||||| ||||| ||||||||||||||||||||||| || ||||
ha00683    451 TTTTGGTCCTGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCA 500
                F  G  P  D  K  K  L  K  L  S  I  L  Y  P  A  T  T

           501 ----+----*----+----*----+----*----+----*----+----* 550
                 G  R  N  F  D  E  I  L  R  V  V  D  S  L  Q  L  
mni09115   469 CGGGCAGGAACTTTGATGAGATTCTCAGAGTGGTTGACTCTCTCCAGCTG 518
               | |||||||||||||||||||||||||| || ||   |||||||||||||
ha00683    501 CTGGCAGGAACTTTGATGAGATTCTCAGGGTAGTCATCTCTCTCCAGCTG 550
                 G  R  N  F  D  E  I  L  R  V  V  I  S  L  Q  L  

           551 ----+----*----+----*----+----*----+----*----+----* 600
               T  G  T  K  P  V  A  T  P  V  D  W  K  K  G  E  S 
mni09115   519 ACAGGCACAAAGCCGGTTGCCACCCCAGTTGACTGGAAGAAGGGAGAGAG 568
               ||||    |||   |||||||||||||||||| |||||| | || || ||
ha00683    551 ACAGCAGAAAAAAGGGTTGCCACCCCAGTTGATTGGAAGGATGGGGATAG 600
               T  A  E  K  R  V  A  T  P  V  D  W  K  D  G  D  S 

           601 ----+----*----+----*----+----*----+----*----+----* 650
                V  M  V  V  P  T  L  S  E  E  E  A  K  Q  C  F  P
mni09115   569 CGTGATGGTAGTTCCCACCCTCTCCGAAGAGGAAGCCAAACAATGTTTCC 618
                ||||||||  |||| ||| || | ||||| ||||||||| ||  |||||
ha00683    601 TGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAACTTTTCC 650
                V  M  V  L  P  T  I  P  E  E  E  A  K  K  L  F  P

           651 ----+----*----+----*----+----*----+----*----+----* 700
                 K  G  V  F  T  K  E  L  P  S  G  K  K  Y  L  R  
mni09115   619 CTAAAGGAGTCTTCACCAAAGAGCTCCCGTCTGGCAAAAAATACCTCCGT 668
               | |||||||||||||||||||||||||| |||||||| ||||||||||| 
ha00683    651 CGAAAGGAGTCTTCACCAAAGAGCTCCCATCTGGCAAGAAATACCTCCGC 700
                 K  G  V  F  T  K  E  L  P  S  G  K  K  Y  L  R  

           701 ----+----*----+----*----+----*----+----*----+----* 750
               Y  T  P  Q  P  *                                  
mni09115   669 TATACACCCCAGCCTTAAGTCT.TTGCGGAAATTGGGGCTGCATCTGCAC 717
               || ||||||||||||||||||| |||  ||| |||| ||||         
ha00683    701 TACACACCCCAGCCTTAAGTCTCTTGGAGAAGTTGGTGCTG......... 741
               Y  T  P  Q  P  *                                  

           751 ----+----*----+----*----+----*----+----*----+----* 800
mni09115   718 ATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCA 767
                          | ||| |||||||||||||| ||   |||  | | ||||
ha00683    742 ..........TGAGCCAGAGGATGTCAGCTGCCAATTGTGTTTTCCTGCA 781

           801 ----+----*----+----*----+----*----+----*----+----* 850
mni09115   768 GCAGGTCCGTAGAAAGATCGTGGCATGATCACAGCCGGTCCTGTAGATCG 817
               |||  ||| || | | ||| |||  | |||||||||      ||   | |
ha00683    782 GCAATTCCATAAACACATCCTGGTGTCATCACAGCC...AAGGTTTTTAG 828

           851 ----+----*----+----*----+----*----+----*----+----* 900
mni09115   818 CTCGCTATACTACTGGGTCATTAAATGGAAATGGCACCAAAACCTTCTCG 867
                | ||||||| | ||| | |||||||| ||||||||| ||||  |||| |
ha00683    829 GTTGCTATACCAATGGCTTATTAAATGAAAATGGCACTAAAAGTTTCTTG 878

           901 ----+----*----+----*----+----*----+----*----+----* 950
mni09115   868 GGATTCTT..TACTCTGTGCCTTCGCCAGCATTCTGCCCCTCTGCCTGTC 915
                |||||||  |||||| |||||||  ||           |  | ||  ||
ha00683    879 AGATTCTTTATACTCTCTGCCTTCAGCA.........ATCAATTCCATTC 919

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mni09115   916 ACAGTGCCCTACT.GACTGGCTCTCTTTGAAACGAATTATGTATTGAAGA 964
               | |   |   |||   |||| ||| |||||||    || |||||| || |
ha00683    920 ATACATCAGCACTCTGCTGGTTCTGTTTGAAATATGTTCTGTATTTAAAA 969

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mni09115   965 TTC.......CTTAGGTCTCTGTAGGGTCTTTGATCAGCAAACAAGGTAG 1007
                ||        || | |||||| ||||  | ||| ||   ||        
ha00683    970 CTCAAATCTTGTTGGATCTCTGCAGGGCTTGTGACCAATGAAGTCATATT 1019

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mni09115  1008 TGTCAGTG...............TGGGCTCTGTGCTAGAATGA.TGAAAC 1041
               |||   ||               |   |||  |   ||||||| |   | 
ha00683   1020 TGTTGATGGTTGACAAAGCTTGCTTCACTCCATCAGAGAATGACTATCAA 1069

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mni09115  1042 ACCTTTTGTATCTTTCCGA..ACTGAATCTTCTGTTACCCATTTTGGAGA 1089
                  |||| || || ||| |  ||    ||| |||| |||||||||| |||
ha00683   1070 TTTTTTTTTAACTGTCCTATCACGTCCTCTCCTGTCACCCATTTTGAAGA 1119

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mni09115  1090 GCACTGACATAGGGAGAAGCTTTCGATTCTGT.................. 1121
               |   || || |    |||| |     | || |                  
ha00683   1120 G...TGGCAGAACTTGAAGTTCAACTTCCTCTGTAAATATCCAAGTATAA 1166

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mni09115  1122 .................................................. 1122
                                                                 
ha00683   1167 AGCCCAGGAACTTCTAGAATAACCCAGATGCGCTTTAATTTTTTTTAATA 1216

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mni09115  1122 ...........................................ATTTTTA 1128
                                                          || ||  
ha00683   1217 TGTTTTGATCACAGAACTTCTAGAATAACCCAGATGCTCTTTCATATTCT 1266

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mni09115  1129 GTAAATAAAAAGTGGGGACAGCCGGGAGAA.................... 1158
                | |||| |   ||   ||||| ||| |||                    
ha00683   1267 TTTAATACATCTTGATCACAGCTGGGGGAAAAAAAGCTTTTTAATTCTGT 1316

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mni09115  1159 .................................................. 1159
                                                                 
ha00683   1317 ACCTTCCTAGTAGATAAGTGAAGAGCAGGGAAAGAGACCTTTAAATATTT 1366

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mni09115  1159 TTCTTACAGGGAATCTATTGTAAGTTTCTATCGAAGTGGGCTCA...... 1202
               | ||   |   ||| | |  |||||||||||| || ||||   |      
ha00683   1367 TGCTATAAAAAAATTTGTGATAAGTTTCTATCAAAATGGGGAGATTGCAG 1416

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mni09115  1203 GAAAGCCTT...TCGCCTCCCAAGAGTGCG.................... 1229
                |||| |||   | | ||||||||   | |                    
ha00683   1417 AAAAGGCTTCCCTTGGCTCCCAAGGAGGTGTAGCAGGTGTGAGCAATATT 1466

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mni09115  1230 .....CATGTACCT....CCTAGAGTTTCCA......CATCTGCTCTCTG 1264
                    ||||| |||    |  || |||| ||        |||| | || |
ha00683   1467 AGTGCCATGTGCCTTTCACACAGGGTTTGCATTTATCAGTCTGTTTTCCG 1516

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mni09115  1265 GTGATGTCTGCCTGTGAACGCACCTTAT........AAAAGACGGGCGGT 1306
                |||||| | | ||  |  | ||   ||        || |||       |
ha00683   1517 ATGATGTGTACATGAAAGAGTACACCATGTGAAGAGAAGAGAGAATGATT 1566

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mni09115  1307 GACAGTGTTTTACCA.CTCAGTGTCCTAGTAGTGGGTGGCCA.TTTCTGA 1354
               || | |||||||  |    | | | || | ||||||| || | |||||  
ha00683   1567 GAAAATGTTTTAGTATAGAACTCTTCTTGCAGTGGGTTGCTATTTTCTAG 1616

          1651 ----+----*----+----*----+----*----+----* 1690
mni09115  1355 ATTCTGCTTTTTGAGGTTCAACAAATAAAATCCTGATCAG 1394
               ||| | ||||||  ||  ||  ||||||||||||      
ha00683   1617 ATTTTACTTTTTAGGGAACA..AAATAAAATCCTTTGTT. 1653