FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0783.ptfa, 358 aa vs ./tmplib.26680 library 1768659 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.1126+/-0.00566; mu= 15.6582+/- 0.379 mean_var=143.8770+/-32.738, 0's: 0 Z-trim: 8 B-trim: 4 in 1/35 Lambda= 0.1069 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4034 ( 1554 res) mbg21043 (1554) 190 41 0.00054 mKIAA1696 ( 675 res) mpm12224 ( 675) 169 37 0.0032 mKIAA0234 ( 1390 res) mpm08099 (1390) 167 37 0.006 >>mKIAA4034 ( 1554 res) mbg21043 (1554 aa) initn: 171 init1: 143 opt: 190 Z-score: 164.0 bits: 41.0 E(): 0.00054 Smith-Waterman score: 190; 25.688% identity (29.016% ungapped) in 218 aa overlap (13-219:224-427) 10 20 30 mKIAA0 DIFPVDNSDTSSSVDGRRKHKQPALTADFVNYYFERN---MR : :. : ..: ::.: . .. . .: mKIAA4 TKMGFAPGKAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTSDTKDKEYKPHDIPQR 200 210 220 230 240 250 40 50 60 70 80 90 mKIAA0 M-IQIQENMAEQKNIKDKLENEQEKLHVEYNKLCESLEELQNLNGKLRSEGQGIWALLGR . .: :. . : ... : ....: .. :. . .:: .. : mKIAA4 QSVQPAETCPPARRAK-RMRAEAMNIKIEPEEATEA--RTHNLRRRMGCTTPK-WE---- 260 270 280 290 300 100 110 120 130 140 150 mKIAA0 ITGQKLNVPAILRAPKERKP----SKKEG--GTQKTSALPTVLYSCGICKKNHDQHLLLL ..: .: . : :.: :.:: . : .: . :: : .: ...:. ::: mKIAA4 --NEKEMKSTIKQEPTEKKDCELESEKEKPKSRAKKTATAVDLYVCLLCGSGNDEDRLLL 310 320 330 340 350 360 160 170 180 190 200 210 mKIAA0 CDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSEC-DQAGSSDMEAEMAMETLPDGTKRSR :: : :: :: ::: .:. :.: .: : .. .:: .. : : :. mKIAA4 CDGCDDSYHTFCLVPPLHDVPKGD----WRCPKCLAQECNKPQEAFGFEQAARDYTLRTF 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 RQIKEPVKFVPQDVPPEPKKIPIRNTRTRGRKRSFVPEEEKHEERVPRERRQRQSVLQKK .. . : mKIAA4 GEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRD 420 430 440 450 460 470 >>mKIAA1696 ( 675 res) mpm12224 (675 aa) initn: 255 init1: 125 opt: 169 Z-score: 150.1 bits: 37.2 E(): 0.0032 Smith-Waterman score: 181; 36.559% identity (40.964% ungapped) in 93 aa overlap (248-337:452-537) 220 230 240 250 260 270 mKIAA0 VKFVPQDVPPEPKKIPIRNTRTRGRKRSFVPEEEKHEERVPRERRQRQSVLQKKPKAEDL ::.:: : : : .: . : mKIAA1 RKRGRPPKYNAVLGFGALTPTSPPSSHPDSPENEKTETTFTFPA-PVQPVSLPSPTSTDG 430 440 450 460 470 480 280 290 300 310 320 330 mKIAA0 RTE---CSTCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDSSSSK . ::.:. .:. :. :: : ::. ::.:::: :: :. ::: .:... : mKIAA1 DIHEDFCSVCRKSGQ---LLMCDTCSRVYHLDCLEPPLKTIPK--GM-WICPRCQDQMLK 490 500 510 520 530 340 350 mKIAA0 EDENEAEKKNASQELSMEQKTPKK ..: mKIAA1 KEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKELSSSISKCM 540 550 560 570 580 590 >>mKIAA0234 ( 1390 res) mpm08099 (1390 aa) initn: 169 init1: 112 opt: 167 Z-score: 145.3 bits: 37.4 E(): 0.006 Smith-Waterman score: 167; 38.889% identity (42.000% ungapped) in 54 aa overlap (136-189:161-210) 110 120 130 140 150 160 mKIAA0 VPAILRAPKERKPSKKEGGTQKTSALPTVLYSCGICKKNHDQHLLLLCDTCKLHYHLGCL : : .:... .. ::::: : .::. :: mKIAA0 KEELSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCL 140 150 160 170 180 190 170 180 190 200 210 220 mKIAA0 DPPLTRMPRKTKNSYWQCSECDQAGSSDMEAEMAMETLPDGTKRSRRQIKEPVKFVPQDV ::: ..:. . :.: .: .: mKIAA0 LPPLPEIPK----GVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFN 200 210 220 230 240 358 residues in 1 query sequences 1768659 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:28:34 2006 done: Mon Mar 27 10:28:34 2006 Scan time: 0.580 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]