FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0274.ptfa, 652 aa vs ./tmplib.26680 library 1768365 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.4269+/-0.0051; mu= 7.6332+/- 0.340 mean_var=124.5069+/-28.872, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1149 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0851 ( 611 res) mbh00089 ( 611) 257 54 5e-08 mKIAA0966 ( 1169 res) mpm04106 (1169) 243 52 4e-07 mKIAA0910 ( 1584 res) mbg06264 (1584) 208 46 2.8e-05 mKIAA0348 ( 1299 res) mpm09073 (1299) 195 44 0.00011 >>mKIAA0851 ( 611 res) mbh00089 (611 aa) initn: 484 init1: 137 opt: 257 Z-score: 236.5 bits: 54.0 E(): 5e-08 Smith-Waterman score: 469; 31.389% identity (36.218% ungapped) in 360 aa overlap (7-359:225-543) 10 20 30 mKIAA0 GQSKLLIYGRPVYVTLIARRSSRFAGTRFLKRGANC : :. ::.::: ::.:. :: . mKIAA0 HLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDS 200 210 220 230 240 250 40 50 60 70 80 90 mKIAA0 EGDVANEVETEQILCDASVMSFTAGSYSSYVQVRGSVPLFWSQDIST-MMPKPPIT--LD :: .:: ::::::. .:. .:.::.:::.:.:::: . . :.: :. . mKIAA0 EGHAANFVETEQIV-------HYSGNRASFVQTRGSIPIFWSQRPNLKYKPHPQISKVAN 260 270 280 290 300 100 110 120 130 140 150 mKIAA0 QADPFAHVAALHFDQMLQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPE . : : . :::... .:. .:: :::... . :. : . .. :. :.. . mKIAA0 HMDGFQR----HFDSQVIIYGKQVII-NLVNHKGS---EKPLEQTFANMVSSLGSGM--- 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 HTIVYIPWDMAKYTKSKLCNVLDRLNVIAESVVKKTGFFVNRPDSYCSILRPDEKWNELG : :: .:. : :. :::... ..:.. . :: . . . mKIAA0 --IRYIAFDFHKECKNMR---WDRLSILLDQVAEMQDEL-----SYFLV--------DSA 360 370 380 390 220 230 240 250 260 270 mKIAA0 GHVIPTGRLQTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLID-KPNLQFDTDAV :.:. . : :..:.::.:::::::. : .... .: :: ::.. .:. . . mKIAA0 GKVVTN---QDGVFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFE 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA0 RLFEELYEDHGDTLSLQYGGSQLVHRVKTYRKIAPWTQHS--KDIMQTLSRYYSNAFSDA . ... . :.... . ::.:. .. . . . :: . : ...: :::.: :::. mKIAA0 KTYKNAWADNANACAKQYAGTGALKT--DFTRTGKRTQLGLLMDGFNSLLRYYKNNFSDG 460 470 480 490 500 510 340 350 360 370 380 mKIAA0 DRQDSINLFLGVFHPTEGKPHL-WELPTDFYLHHKNTMSLLPPRRSYTYWWTPEVVKHLP :::::.:::: . : . : .: :. mKIAA0 FRQDSIDLFLGNYSVDELESHSPLSVPRDWKFLALPIIMVVAFSMCIICLLMAGDTWTET 520 530 540 550 560 570 >>mKIAA0966 ( 1169 res) mpm04106 (1169 aa) initn: 469 init1: 131 opt: 243 Z-score: 220.2 bits: 51.9 E(): 4e-07 Smith-Waterman score: 448; 30.631% identity (35.540% ungapped) in 333 aa overlap (14-342:315-605) 10 20 30 40 mKIAA0 GQSKLLIYGRPVYVTLIARRSSRFAGTRFLKRGANCEGDVANE :.::.::: . :: :. .::.. .:.::: mKIAA0 YNESSDDDKSSPETPPQDSTCVDDIHPRFLVALISRRSRHRAGMRYKRRGVDKNGNVANY 290 300 310 320 330 340 50 60 70 80 90 100 mKIAA0 VETEQILCDASVMSFTAGSYSSYVQVRGSVPLFWSQDISTMMPKPPITLDQADPFAHVAA :::::.. : : :..:.:::::.:::: . :.: . .. . : mKIAA0 VETEQLI---HVHHHTL----SFIQTRGSVPVFWSQVGYRYNPRPRLDKSEKETVDCFCA 350 360 370 380 390 110 120 130 140 150 160 mKIAA0 LHFDQMLQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDM ::...:. . . .:. ::: .. .:.:... . : .:. :. : :. .:. mKIAA0 -HFEEQLKIYKKQVIV-NLV---DQAGREKIIGDAYLKQVLLFNN---PKLT--YVSFDF 400 410 420 430 440 170 180 190 200 210 220 mKIAA0 AKYTKS-KLCNVLDRLNVIAESVVKKTGFFVNRPDSYCSILRPDEKWNELGGHVIPTGRL .. .. :. :: ..: . .. ..: : . .: . mKIAA0 HEHCRGMKFENVQTLTDAIHDIIIDM---------KWC--------WVDQAGVICK---- 450 460 470 480 230 240 250 260 270 280 mKIAA0 QTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLIDKPNLQFDTDAVRLFEELYEDH : ::.:.::.:::::::..: ... .. :: .::.. :. . . : .. .. .. mKIAA0 QEGIFRVNCMDCLDRTNVVQAAIARVVMEQQLKKLGVMP-PEQPLPVKCNRTYQIMWANN 490 500 510 520 530 540 290 300 310 320 330 mKIAA0 GDTLSLQYGGSQLVHR--VKT-YRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINLF ::..: ::.:. .. ..: ::.: :: ... .::: . :.:: :: :.:. mKIAA0 GDSISRQYAGTAALKGDFTRTGERKLAGVM---KDGVNSANRYYLSRFKDAYRQAVIDLM 550 560 570 580 590 600 340 350 360 370 380 390 mKIAA0 LGVFHPTEGKPHLWELPTDFYLHHKNTMSLLPPRRSYTYWWTPEVVKHLPLPYDEVICAA :: mKIAA0 QGVPVTEDLYSIFTKEKEHEALHKESQRSHQELISQLLQSYMQLLLPGDEKFHGGWALVD 610 620 630 640 650 660 >>mKIAA0910 ( 1584 res) mbg06264 (1584 aa) initn: 429 init1: 175 opt: 208 Z-score: 187.1 bits: 46.2 E(): 2.8e-05 Smith-Waterman score: 386; 31.024% identity (38.007% ungapped) in 332 aa overlap (16-340:213-490) 10 20 30 40 mKIAA0 GQSKLLIYGRPVYVTLIARRSSRFAGTRFLKRGANCEGDVANEVE ::.: : . ::::: ::.: .: ::: :: mKIAA0 VNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVE 190 200 210 220 230 240 50 60 70 80 90 100 mKIAA0 TEQILCDASVMSFTAGSYSSYVQVRGSVPLFWSQDISTMMPKPPITLDQA-DPFAHVAAL :::.. . ::..:.:::::::: : . .. . . .... . : . mKIAA0 TEQVI-------YLDDCVSSFIQIRGSVPLFWEQP-GLQVGSHRVRMSRGFEANAPAFDR 250 260 270 280 290 110 120 130 140 150 160 mKIAA0 HFDQMLQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHT--IVYIPWD :: . . .:. :.. ::. .: :..::. .. ... ::. : .. .: mKIAA0 HFRTLKDLYGKQIVV-NLLGSKEG---EHMLSK------AFQSHLKASEHASDIHMVSFD 300 310 320 330 340 170 180 190 200 210 mKIAA0 MAKYTKSKLCNVLDRLNVIAESVVKKT---GFFVNRPDSYCSILRPDEKWNELGGHVIPT . ...:. . ..:. : . :.: ::: : . :..: mKIAA0 YHQMVKG---GKAEKLHSILKPQVQKFLDYGFF------YFD-----------GSEV--- 350 360 370 380 220 230 240 250 260 270 mKIAA0 GRLQTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLIDKPNLQFDTDAVRLFEELY : :.: .::::.:::::::..: ..: :: :: .::: .:: :. : ..:. .. mKIAA0 QRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKP--QLVTRFQEVFRSMW 390 400 410 420 430 280 290 300 310 320 330 mKIAA0 EDHGDTLSLQYGGS-QLVHRVKTYRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINL .::..: :.:. : ..: :: ....: .: : :...:..:.. mKIAA0 SVNGDSISKIYAGTGALEGKAKL-----------KDGARSVTRTIQNNFFDSSKQEAIDV 440 450 460 470 480 340 350 360 370 380 390 mKIAA0 FLGVFHPTEGKPHLWELPTDFYLHHKNTMSLLPPRRSYTYWWTPEVVKHLPLPYDEVICA .: mKIAA0 LLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKNMCENFYKYSKPKKIRVCVG 490 500 510 520 530 540 >>mKIAA0348 ( 1299 res) mpm09073 (1299 aa) initn: 404 init1: 162 opt: 195 Z-score: 176.6 bits: 44.0 E(): 0.00011 Smith-Waterman score: 351; 29.762% identity (37.037% ungapped) in 336 aa overlap (16-340:70-350) 10 20 30 40 mKIAA0 GQSKLLIYGRPVYVTLIARRSSRFAGTRFLKRGANCEGDVANEVE ::.: : . ::.::: ::.: .: :.: :: mKIAA0 VNCHNWLLKVICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVE 40 50 60 70 80 90 50 60 70 80 90 100 mKIAA0 TEQILCDASVMSFTAGSYSSYVQVRGSVPLFWSQDISTMMPKPPITLDQA-DPFAHVAAL ::: . . . ::.::.:::::::: : . .. . . : .. . : . mKIAA0 TEQTI-------YMDDGVSSFVQIRGSVPLFWEQP-GLQVGSHHLRLHRGLEANAPAFER 100 110 120 130 140 150 110 120 130 140 150 160 mKIAA0 HFDQMLQRFGSPIIILNLVKEREKRKHERILS---EELVAAVTYLNQFLPPEHTIVYIPW :. . ...:. ... ::. .: :..:. ..:. : . .. : .: . mKIAA0 HMVLLKEQYGKQVVV-NLLG---SRGGEEVLNRAFKKLLWASCHAGD-TP------MINF 160 170 180 190 200 170 180 190 200 210 mKIAA0 DMAKYTKSKLCNVLDRLNVIAESVVKKTGFFVNRPDSYCSILRPDEK--WNELG----GH :. ...:.. :..:. ..:::. . :...: :. mKIAA0 DFHQFAKGRK---LEKLE---------------------NLLRPQLQLHWEDFGVFAKGE 210 220 230 220 230 240 250 260 270 mKIAA0 VIPTGRLQTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLIDKPNL-QFDTDAVRL . . :.: : :: ::.::::::::.: ... .: :: :::: .:: . .: :. mKIAA0 NV-SPRFQKGTLRMNCLDCLDRTNTVQCFIALEVLHLQLESLGLNSKPIIDRF----VES 240 250 260 270 280 290 280 290 300 310 320 330 mKIAA0 FEELYEDHGDTLSLQYGGSQLVHRVKTYRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQD :. .. .: .:: . ::. .. :. :: ...:: .. : :. .:. mKIAA0 FKAMWSLNGHSLSKVFTGSRALEGKAKVGKL-------KDGARSMSRTIQSNFFDGVKQE 300 310 320 330 340 340 350 360 370 380 390 mKIAA0 SINLFLGVFHPTEGKPHLWELPTDFYLHHKNTMSLLPPRRSYTYWWTPEVVKHLPLPYDE .:.:.: mKIAA0 AIKLLLVGDVYNEESTDKGRMLLDNTALLATPRILKAMTERQSEFTNFKRIQIAVGTWNV 350 360 370 380 390 400 652 residues in 1 query sequences 1768365 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:16:16 2006 done: Mon Mar 27 10:16:17 2006 Scan time: 0.790 Display time: 0.120 Function used was FASTA [version 3.4t11 Apr 17, 2002]