# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mnh10335.fasta.nr -Q ../query/mKIAA1178.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1178, 346 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920770 sequences Expectation_n fit: rho(ln(x))= 5.5231+/-0.000186; mu= 9.2415+/- 0.010 mean_var=81.2558+/-15.678, 0's: 21 Z-trim: 21 B-trim: 5 in 1/64 Lambda= 0.142281 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148685558|gb|EDL17505.1| mCG134114, isoform CRA ( 369) 2362 494.0 1.9e-137 gi|31339987|sp|Q9CWK3.1|CD2B2_MOUSE RecName: Full= ( 342) 2330 487.4 1.7e-135 gi|74178565|dbj|BAE32530.1| unnamed protein produc ( 342) 2329 487.2 2e-135 gi|149067756|gb|EDM17308.1| CD2 antigen (cytoplasm ( 340) 2230 466.9 2.6e-129 gi|109128203|ref|XP_001110388.1| PREDICTED: CD2 an ( 341) 2166 453.8 2.3e-125 gi|90079185|dbj|BAE89272.1| unnamed protein produc ( 339) 2153 451.1 1.5e-124 gi|73958440|ref|XP_547057.2| PREDICTED: similar to ( 344) 2127 445.8 6e-123 gi|149725842|ref|XP_001501595.1| PREDICTED: simila ( 341) 2115 443.3 3.3e-122 gi|55728994|emb|CAH91235.1| hypothetical protein [ ( 341) 2114 443.1 3.8e-122 gi|55730034|emb|CAH91742.1| hypothetical protein [ ( 341) 2109 442.1 7.8e-122 gi|31339956|sp|O95400.1|CD2B2_HUMAN RecName: Full= ( 341) 2098 439.8 3.7e-121 gi|134024825|gb|AAI34721.1| CD2BP2 protein [Bos ta ( 341) 2089 438.0 1.3e-120 gi|109128207|ref|XP_001110303.1| PREDICTED: CD2 (c ( 337) 1902 399.6 4.8e-109 gi|126334620|ref|XP_001370986.1| PREDICTED: hypoth ( 286) 1398 296.1 5.8e-78 gi|33337731|gb|AAQ13502.1|AF109192_1 FWP010 [Homo ( 190) 1187 252.6 4.6e-65 gi|149067758|gb|EDM17310.1| CD2 antigen (cytoplasm ( 197) 1166 248.3 9.4e-64 gi|149540610|ref|XP_001518429.1| PREDICTED: hypoth ( 296) 1056 225.9 8.1e-57 gi|39850142|gb|AAH64226.1| CAP-GLY domain containi ( 400) 761 165.4 1.7e-38 gi|49670701|gb|AAH75535.1| CAP-GLY domain containi ( 400) 757 164.6 3.1e-38 gi|156223772|gb|EDO44604.1| predicted protein [Nem ( 337) 735 160.0 6.1e-37 gi|80476958|gb|AAI08871.1| Cd2bp2 protein [Xenopus ( 403) 714 155.8 1.4e-35 gi|28279437|gb|AAH45270.1| Cd2bp2 protein [Xenopus ( 403) 706 154.1 4.4e-35 gi|193914485|gb|EDW13352.1| GI18162 [Drosophila mo ( 312) 691 151.0 3e-34 gi|193900113|gb|EDV98979.1| GH13298 [Drosophila gr ( 311) 676 147.9 2.6e-33 gi|194147603|gb|EDW63301.1| GJ14592 [Drosophila vi ( 312) 676 147.9 2.6e-33 gi|149234218|ref|XP_001475490.1| PREDICTED: hypoth ( 111) 656 143.5 2e-32 gi|148707943|gb|EDL39890.1| mCG50893 [Mus musculus ( 95) 641 140.4 1.5e-31 gi|212513861|gb|EEB16277.1| conserved hypothetical ( 330) 641 140.7 3.9e-31 gi|91081321|ref|XP_969973.1| PREDICTED: similar to ( 314) 634 139.3 1e-30 gi|194106284|gb|EDW28327.1| GL19140 [Drosophila pe ( 316) 628 138.1 2.4e-30 gi|54645730|gb|EAL34468.1| GA18730 [Drosophila pse ( 314) 627 137.8 2.7e-30 gi|193641252|ref|XP_001945221.1| PREDICTED: simila ( 322) 621 136.6 6.6e-30 gi|221104249|ref|XP_002165595.1| PREDICTED: simila ( 331) 587 129.7 8.5e-28 gi|47199314|emb|CAF88122.1| unnamed protein produc ( 323) 583 128.8 1.5e-27 gi|82407299|pdb|1SYX|B Chain B, The Crystal Struct ( 86) 574 126.6 1.9e-27 gi|221222274|gb|ACM09798.1| CD2 antigen cytoplasmi ( 380) 580 128.3 2.6e-27 gi|28279704|gb|AAH45960.1| CD2 antigen (cytoplasmi ( 378) 579 128.1 2.9e-27 gi|47217807|emb|CAG07221.1| unnamed protein produc ( 381) 575 127.2 5.2e-27 gi|31076777|sp|Q9VKV5.1|LIN1_DROME RecName: Full=L ( 319) 552 122.5 1.2e-25 gi|17861590|gb|AAL39272.1| GH13760p [Drosophila me ( 319) 551 122.3 1.4e-25 gi|110755361|ref|XP_624215.2| PREDICTED: similar t ( 317) 548 121.6 2.1e-25 gi|194190972|gb|EDX04548.1| GD23703 [Drosophila si ( 318) 543 120.6 4.3e-25 gi|194130401|gb|EDW52444.1| GM18415 [Drosophila se ( 318) 541 120.2 5.7e-25 gi|190616827|gb|EDV32351.1| GF15791 [Drosophila an ( 320) 519 115.7 1.3e-23 gi|194175223|gb|EDW88834.1| GE18946 [Drosophila ya ( 320) 506 113.0 8.3e-23 gi|190661358|gb|EDV58550.1| GG10134 [Drosophila er ( 320) 504 112.6 1.1e-22 gi|3355658|emb|CAA08790.1| SMC2orf [Podocoryne car ( 326) 484 108.5 1.9e-21 gi|198426466|ref|XP_002127802.1| PREDICTED: simila ( 373) 473 106.3 1e-20 gi|210109090|gb|EEA56970.1| hypothetical protein B ( 363) 464 104.4 3.6e-20 gi|159162372|pdb|1GYF|A Chain A, Gyf Domain From H ( 62) 453 101.6 4.3e-20 >>gi|148685558|gb|EDL17505.1| mCG134114, isoform CRA_b [ (369 aa) initn: 2362 init1: 2362 opt: 2362 Z-score: 2623.8 bits: 494.0 E(): 1.9e-137 Smith-Waterman score: 2362; 100.000% identity (100.000% similar) in 346 aa overlap (1-346:24-369) 10 20 30 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAA ::::::::::::::::::::::::::::::::::::: gi|148 YRRKHLSFSSPPDPGFLGPAGGNPQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAA 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 AGGPGSRFKGKHSLDSDEEDDDEEGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AGGPGSRFKGKHSLDSDEEDDDEEGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQE 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 EMEEGHFDADGNYFLNQDAQIRDSWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EMEEGHFDADGNYFLNQDAQIRDSWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSA 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 QALLEGLLELLLPRETVAGALRRLGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QALLEGLLELLLPRETVAGALRRLGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVAR 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 GNLGVYQETRERLAMRLKGLGCRAQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GNLGVYQETRERLAMRLKGLGCRAQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAE 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 SAGDGLMDVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SAGDGLMDVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNS 310 320 330 340 350 360 340 mKIAA1 KRIDFELYT ::::::::: gi|148 KRIDFELYT >>gi|31339987|sp|Q9CWK3.1|CD2B2_MOUSE RecName: Full=CD2 (342 aa) initn: 2330 init1: 2330 opt: 2330 Z-score: 2588.8 bits: 487.4 E(): 1.7e-135 Smith-Waterman score: 2330; 100.000% identity (100.000% similar) in 342 aa overlap (5-346:1-342) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 MPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 AQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 AQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL 240 250 260 270 280 290 310 320 330 340 mKIAA1 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT :::::::::::::::::::::::::::::::::::::::::::::: gi|313 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT 300 310 320 330 340 >>gi|74178565|dbj|BAE32530.1| unnamed protein product [M (342 aa) initn: 2329 init1: 2329 opt: 2329 Z-score: 2587.7 bits: 487.2 E(): 2e-135 Smith-Waterman score: 2329; 99.708% identity (100.000% similar) in 342 aa overlap (5-346:1-342) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 AQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|741 AQGSHDPTPPPSLDMFAEEIAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL 240 250 260 270 280 290 310 320 330 340 mKIAA1 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT :::::::::::::::::::::::::::::::::::::::::::::: gi|741 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT 300 310 320 330 340 >>gi|149067756|gb|EDM17308.1| CD2 antigen (cytoplasmic t (340 aa) initn: 1430 init1: 1076 opt: 2230 Z-score: 2477.9 bits: 466.9 E(): 2.6e-129 Smith-Waterman score: 2230; 96.199% identity (98.830% similar) in 342 aa overlap (5-346:1-340) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE ::::::::::::::: ::::::::::::::::.::::::::::::::::::::::: gi|149 MPKRKVTFQGVGDEDDEDEISVPKKKLVDPVAGAGGPGSRFKGKHSLDSDEEDDDE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|149 -GSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDSQIRD 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR ::::::::::::::::::.:::::::: ::::::::.::::::::::::::::::::::: gi|149 SWLDNIDWVRIKERPPDKQQVSDSEEEGSLGQTPMSVQALLEGLLELLLPRETVAGALRR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LGARGGGKG-NSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 AQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL .:::::::::::::::::::.::::::::::.::::.::::::::::::::::::::::: gi|149 TQGSHDPTPPPSLDMFAEEVTEGELETPTPTHREEADSAGDGLMDVMWEYKWENTGDAEL 240 250 260 270 280 290 310 320 330 340 mKIAA1 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT ::::::::::::::::::::::::::::::::::::::::::.::: gi|149 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT 300 310 320 330 340 >>gi|109128203|ref|XP_001110388.1| PREDICTED: CD2 antige (341 aa) initn: 1175 init1: 1175 opt: 2166 Z-score: 2406.9 bits: 453.8 E(): 2.3e-125 Smith-Waterman score: 2166; 92.982% identity (97.076% similar) in 342 aa overlap (5-346:1-341) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE ::::::::::::::. ::::::::::::::::..:::::::::::::::::::::. gi|109 MPKRKVTFQGVGDEEDEDEISVPKKKLVDPVAGSGGPGSRFKGKHSLDSDEEDDDD 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|109 GGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNRDAQIRD 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR :::::::::.:.:::: .::.::::::::::::::::::::::::::::::::::::::: gi|109 SWLDNIDWVKIRERPPGQHQASDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR :::::::::: ::: :::.::::::::::::::::::::::::::::::::::::::::. gi|109 LGARGGGKGS-SKGPGRPSSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 AQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL . : :.:::::::::::::::: :::::::::: :::: ::::.:::::::::::::::: gi|109 TVGPHNPTPPPSLDMFAEEVAEEELETPTPTQRGEAESPGDGLVDVMWEYKWENTGDAEL 240 250 260 270 280 290 310 320 330 340 mKIAA1 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT :::::::::::::::::::::::::::::::::::::::::::::: gi|109 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT 300 310 320 330 340 >>gi|90079185|dbj|BAE89272.1| unnamed protein product [M (339 aa) initn: 1175 init1: 1175 opt: 2153 Z-score: 2392.5 bits: 451.1 E(): 1.5e-124 Smith-Waterman score: 2153; 92.941% identity (97.059% similar) in 340 aa overlap (5-344:1-339) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE ::::::::::::::. ::::::::::::::::..:::::::::::::::::::::. gi|900 MPKRKVTFQGVGDEEDEDEISVPKKKLVDPVAGSGGPGSRFKGKHSLDSDEEDDDD 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|900 GGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNRDAQIRD 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR :::::::::.:.:::: .::.::::::::::::::::::::::::::::::::::::::: gi|900 SWLDNIDWVKIRERPPGQHQASDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR :::::::::: ::: :::.::::::::::::::::::::::::::::::::::::::::. gi|900 LGARGGGKGS-SKGPGRPSSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 AQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL . : :.:::::::::::::::: :::::::::: :::: ::::.:::::::::::::::: gi|900 TVGPHNPTPPPSLDMFAEEVAEEELETPTPTQRGEAESPGDGLVDVMWEYKWENTGDAEL 240 250 260 270 280 290 310 320 330 340 mKIAA1 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT :::::::::::::::::::::::::::::::::::::::::::: gi|900 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFEL 300 310 320 330 >>gi|73958440|ref|XP_547057.2| PREDICTED: similar to CD2 (344 aa) initn: 1640 init1: 1171 opt: 2127 Z-score: 2363.6 bits: 445.8 E(): 6e-123 Smith-Waterman score: 2127; 91.860% identity (96.221% similar) in 344 aa overlap (5-346:1-344) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE ::::::::::::::: ::::::::::::::::.::::::::::::::::::::::. gi|739 MPKRKVTFQGVGDEDDEDEISVPKKKLVDPVAGAGGPGSRFKGKHSLDSDEEDDDD 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNRDAQIRD 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR :::::::::.:::::::.. ::::::::::::::::::::::::::::::::::::::: gi|739 SWLDNIDWVKIKERPPDQRPPSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR 120 130 140 150 160 170 190 200 210 220 230 mKIAA1 LGARGGGKGSN-SKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGC ::::::: :.. :::.:::.::::::::::::::::::::::::::::::::::::::: gi|739 LGARGGGGGKGGSKGAGRPSSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGS 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 RAQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGD-GLMDVMWEYKWENTGDA :.:: :::::::::::::::::::::::::::: ::: :: ::.:::::::::::::: gi|739 RTQGPPDPTPPPSLDMFAEEVAEGELETPTPTQRGEAELKGDDGLVDVMWEYKWENTGDA 240 250 260 270 280 290 300 310 320 330 340 mKIAA1 ELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT ::::::::.::::::.:::: :::::::::::::::::::::::.::: gi|739 ELYGPFTSTQMQTWVNEGYFADGVYCRKLDPPGGQFYNSKRIDFDLYT 300 310 320 330 340 >>gi|149725842|ref|XP_001501595.1| PREDICTED: similar to (341 aa) initn: 1159 init1: 1159 opt: 2115 Z-score: 2350.3 bits: 443.3 E(): 3.3e-122 Smith-Waterman score: 2115; 90.936% identity (96.784% similar) in 342 aa overlap (5-346:1-341) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE ::::::::::::::: ::::.:::::::::::.:::::::::::::::::::.:.: gi|149 MPKRKVTFQGVGDEDDEDEIGVPKKKLVDPVAGAGGPGSRFKGKHSLDSDEEEDEE 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIRD :::::::::::::::::::::: ::::::::::::::::::::::::::::::.:::::: gi|149 EGSSKYDILASEDVEGQEAATLSSEGGVRITPFNLQEEMEEGHFDADGNYFLNRDAQIRD 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 SWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR :::::::::.:.:::::.: .::::::::::::::::::::::::::::::::::::::: gi|149 SWLDNIDWVKIRERPPDQHPLSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALRR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 LGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGCR ::::::.::. ::: :::.::::::::::::::::::::::::::::::::::::.::: gi|149 LGARGGSKGG-SKGPGRPSSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKALGCW 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 AQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAEL .::. ::::::::::::::::: :::::: .:: :::: ::::.:::::::::::::::: gi|149 TQGAPDPTPPPSLDMFAEEVAEEELETPTTAQRGEAESPGDGLVDVMWEYKWENTGDAEL 240 250 260 270 280 290 310 320 330 340 mKIAA1 YGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT ::::::.::::::.::::::::::::::::::::::::::::.::: gi|149 YGPFTSTQMQTWVNEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT 300 310 320 330 340 >>gi|55728994|emb|CAH91235.1| hypothetical protein [Pong (341 aa) initn: 1345 init1: 1000 opt: 2114 Z-score: 2349.2 bits: 443.1 E(): 3.8e-122 Smith-Waterman score: 2114; 90.962% identity (96.210% similar) in 343 aa overlap (5-346:1-341) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE ::::::::::::::. :::: :::::::::::..:::::::::::::::::::::. gi|557 MPKRKVTFQGVGDEEDEDEIIVPKKKLVDPVAGSGGPGSRFKGKHSLDSDEEDDDD 10 20 30 40 50 70 80 90 100 110 mKIAA1 EG-SSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIR .: :::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|557 DGGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNRDAQIR 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 DSWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALR ::::::::::.:.:::: ..:.:::::::::::::::::::::::::::::::::::::: gi|557 DSWLDNIDWVKIRERPPGQRQASDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALR 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 RLGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGC ::::::::.:: :: :::.:::::::::::::::::::::::::::::::::::::::: gi|557 RLGARGGGRGS--KGPGRPSSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGC 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 RAQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAE .. : :.:::::::::::::::: :::::: ::: :::: ::::.::::::::::::::: gi|557 QTLGPHNPTPPPSLDMFAEEVAEEELETPTLTQRGEAESPGDGLVDVMWEYKWENTGDAE 240 250 260 270 280 290 300 310 320 330 340 mKIAA1 LYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT :::::::::::::::::::::::::::::::::::::::::::.::: gi|557 LYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT 300 310 320 330 340 >>gi|55730034|emb|CAH91742.1| hypothetical protein [Pong (341 aa) initn: 1345 init1: 1000 opt: 2109 Z-score: 2343.7 bits: 442.1 E(): 7.8e-122 Smith-Waterman score: 2109; 90.671% identity (96.210% similar) in 343 aa overlap (5-346:1-341) 10 20 30 40 50 60 mKIAA1 PQPIMPKRKVTFQGVGDEDGEDEISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDE ::::::::::::::. :::: :::::::::::..:::::::::::::::::::::. gi|557 MPKRKVTFQGVGDEEDEDEIIVPKKKLVDPVAGSGGPGSRFKGKHSLDSDEEDDDD 10 20 30 40 50 70 80 90 100 110 mKIAA1 EG-SSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNQDAQIR .: :::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|557 DGGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGNYFLNRDAQIR 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 DSWLDNIDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELLLPRETVAGALR ::::::::::.:.:::: ..:.:::::::::::::.:::::::::::::::::::::::: gi|557 DSWLDNIDWVKIRERPPGQRQASDSEEEDSLGQTPISAQALLEGLLELLLPRETVAGALR 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 RLGARGGGKGSNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGC ::::::::.:: :: :::.:::::::::::::::::::::::::::::::::::::::: gi|557 RLGARGGGRGS--KGPGRPSSPQRLDRLSGLADQMVARGNLGVYQETRERLAMRLKGLGC 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 RAQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAGDGLMDVMWEYKWENTGDAE .. : :.:::::::::::::::: :::::: ::: :::: ::::.::::::::::::::: gi|557 QTLGPHNPTPPPSLDMFAEEVAEEELETPTLTQRGEAESPGDGLVDVMWEYKWENTGDAE 240 250 260 270 280 290 300 310 320 330 340 mKIAA1 LYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELYT :::::::::::::::::::::::::::::::::::::::::::.::: gi|557 LYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFDLYT 300 310 320 330 340 346 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 02:08:07 2009 done: Fri Mar 13 02:14:12 2009 Total Scan time: 836.200 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]