# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mnh05011.fasta.nr -Q ../query/mKIAA4009.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4009, 381 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919916 sequences Expectation_n fit: rho(ln(x))= 6.0523+/-0.000192; mu= 7.0643+/- 0.011 mean_var=97.0223+/-18.623, 0's: 26 Z-trim: 33 B-trim: 118 in 1/65 Lambda= 0.130208 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|12857301|dbj|BAB30968.1| unnamed protein produc ( 385) 2533 485.7 7e-135 gi|2494227|sp|Q61501.1|E2F1_MOUSE RecName: Full=Tr ( 430) 2316 445.0 1.4e-122 gi|149030929|gb|EDL85956.1| E2F transcription fact ( 432) 2193 421.9 1.3e-115 gi|194224324|ref|XP_001499027.2| PREDICTED: simila ( 351) 2031 391.4 1.6e-106 gi|73992245|ref|XP_542963.2| PREDICTED: similar to ( 571) 2015 388.5 1.9e-105 gi|194672360|ref|XP_615437.4| PREDICTED: E2F trans ( 437) 1990 383.8 3.9e-104 gi|400928|sp|Q01094.1|E2F1_HUMAN RecName: Full=Tra ( 437) 1989 383.6 4.5e-104 gi|260574|gb|AAB24289.1| transcription factor E2F ( 476) 1989 383.6 4.8e-104 gi|109092339|ref|XP_001103717.1| PREDICTED: simila ( 502) 1988 383.4 5.7e-104 gi|194044474|ref|XP_001926915.1| PREDICTED: simila ( 376) 1985 382.8 6.7e-104 gi|1594285|gb|AAC50719.1| transcription factor E2F ( 437) 1984 382.6 8.6e-104 gi|119596705|gb|EAW76299.1| E2F transcription fact ( 437) 1940 374.4 2.7e-101 gi|126291710|ref|XP_001381329.1| PREDICTED: simila ( 436) 1543 299.8 7.5e-79 gi|2494226|sp|Q90977.1|E2F1_CHICK RecName: Full=Tr ( 403) 1164 228.6 1.9e-57 gi|120538427|gb|AAI29535.1| LOC100036852 protein [ ( 426) 1118 219.9 7.9e-55 gi|149694260|ref|XP_001504272.1| PREDICTED: simila ( 438) 877 174.7 3.4e-41 gi|76611569|ref|XP_874289.1| PREDICTED: similar to ( 367) 871 173.5 6.5e-41 gi|31657162|gb|AAH53676.1| E2F transcription facto ( 437) 854 170.4 6.9e-40 gi|73920203|sp|P56931.2|E2F2_MOUSE RecName: Full=T ( 443) 846 168.9 2e-39 gi|2494228|sp|Q14209.1|E2F2_HUMAN RecName: Full=Tr ( 437) 845 168.7 2.2e-39 gi|61366377|gb|AAX42851.1| E2F transcription facto ( 438) 845 168.7 2.2e-39 gi|148697999|gb|EDL29946.1| E2F transcription fact ( 564) 846 168.9 2.4e-39 gi|114554629|ref|XP_524538.2| PREDICTED: E2F trans ( 437) 842 168.1 3.3e-39 gi|54695916|gb|AAV38330.1| E2F transcription facto ( 437) 841 167.9 3.7e-39 gi|108999097|ref|XP_001102839.1| PREDICTED: E2F tr ( 437) 833 166.4 1.1e-38 gi|74004128|ref|XP_545361.2| PREDICTED: similar to ( 509) 819 163.8 7.4e-38 gi|51476300|emb|CAH18140.1| hypothetical protein [ ( 334) 816 163.1 7.8e-38 gi|118086362|ref|XP_418915.2| PREDICTED: similar t ( 455) 815 163.0 1.1e-37 gi|74139090|dbj|BAE38442.1| unnamed protein produc ( 334) 813 162.6 1.2e-37 gi|18848240|gb|AAH24125.1| E2f3 protein [Mus muscu ( 335) 813 162.6 1.2e-37 gi|126321954|ref|XP_001366911.1| PREDICTED: simila ( 457) 814 162.9 1.3e-37 gi|224045696|ref|XP_002188935.1| PREDICTED: simila ( 340) 812 162.4 1.3e-37 gi|194223054|ref|XP_001915576.1| PREDICTED: simila ( 469) 812 162.5 1.7e-37 gi|194038077|ref|XP_001926236.1| PREDICTED: simila ( 405) 811 162.3 1.7e-37 gi|76663083|ref|XP_614932.2| PREDICTED: similar to ( 463) 799 160.0 9.2e-37 gi|119575825|gb|EAW55421.1| E2F transcription fact ( 335) 792 158.6 1.8e-36 gi|109069810|ref|XP_001103396.1| PREDICTED: simila ( 425) 793 158.9 1.9e-36 gi|2811006|sp|O00716.1|E2F3_HUMAN RecName: Full=Tr ( 465) 792 158.7 2.3e-36 gi|37590269|gb|AAH59262.1| E2f3 protein [Mus muscu ( 388) 789 158.1 3e-36 gi|73920204|sp|O35261.2|E2F3_MOUSE RecName: Full=T ( 457) 789 158.2 3.4e-36 gi|2454576|gb|AAB71671.1| transcriptional activato ( 356) 785 157.3 4.7e-36 gi|738758|prf||2001415A E2F-3 protein ( 465) 773 155.2 2.7e-35 gi|54038500|gb|AAH84507.1| E2F transcription facto ( 427) 757 152.1 2.1e-34 gi|7264224|gb|AAF44124.1| transcription factor E2F ( 429) 748 150.4 6.7e-34 gi|119615463|gb|EAW95057.1| E2F transcription fact ( 350) 743 149.4 1.1e-33 gi|66910671|gb|AAH97504.1| LOC398159 protein [Xeno ( 429) 743 149.5 1.3e-33 gi|149471733|ref|XP_001515449.1| PREDICTED: hypoth ( 468) 743 149.5 1.4e-33 gi|126328552|ref|XP_001362165.1| PREDICTED: simila ( 490) 742 149.4 1.6e-33 gi|224081589|ref|XP_002191350.1| PREDICTED: simila ( 367) 727 146.5 9.1e-33 gi|47230024|emb|CAG10438.1| unnamed protein produc ( 444) 674 136.6 1e-29 >>gi|12857301|dbj|BAB30968.1| unnamed protein product [M (385 aa) initn: 2533 init1: 2533 opt: 2533 Z-score: 2577.8 bits: 485.7 E(): 7e-135 Smith-Waterman score: 2533; 100.000% identity (100.000% similar) in 381 aa overlap (1-381:5-385) 10 20 30 40 50 mKIAA4 FTQLQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 MGKCFTQLQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRG 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 RGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 RGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA4 TNVLEGIQLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 TNVLEGIQLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQ 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA4 LQLLSEDSDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LQLLSEDSDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQ 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA4 GPIDVFLCPEESADGISPGKTSCQETSSGEDRTADSGPAGPPPSPPSTSPALDPSQSLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 GPIDVFLCPEESADGISPGKTSCQETSSGEDRTADSGPAGPPPSPPSTSPALDPSQSLLG 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA4 LEQEAVLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LEQEAVLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYH 310 320 330 340 350 360 360 370 380 mKIAA4 FGLEEGEGIRDLFDCDFGDLTPLDF ::::::::::::::::::::::::: gi|128 FGLEEGEGIRDLFDCDFGDLTPLDF 370 380 >>gi|2494227|sp|Q61501.1|E2F1_MOUSE RecName: Full=Transc (430 aa) initn: 2316 init1: 2316 opt: 2316 Z-score: 2356.8 bits: 445.0 E(): 1.4e-122 Smith-Waterman score: 2316; 100.000% identity (100.000% similar) in 348 aa overlap (34-381:83-430) 10 20 30 40 50 60 mKIAA4 LQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGK :::::::::::::::::::::::::::::: gi|249 PRDSDVLLFATPQAPRPAPSAPRPALGRPPVKRRLDLETDHQYLAGSSGPFRGRGRHPGK 60 70 80 90 100 110 70 80 90 100 110 120 mKIAA4 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI 120 130 140 150 160 170 130 140 150 160 170 180 mKIAA4 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED 180 190 200 210 220 230 190 200 210 220 230 240 mKIAA4 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL 240 250 260 270 280 290 250 260 270 280 290 300 mKIAA4 CPEESADGISPGKTSCQETSSGEDRTADSGPAGPPPSPPSTSPALDPSQSLLGLEQEAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 CPEESADGISPGKTSCQETSSGEDRTADSGPAGPPPSPPSTSPALDPSQSLLGLEQEAVL 300 310 320 330 340 350 310 320 330 340 350 360 mKIAA4 PRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 PRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEEGE 360 370 380 390 400 410 370 380 mKIAA4 GIRDLFDCDFGDLTPLDF :::::::::::::::::: gi|249 GIRDLFDCDFGDLTPLDF 420 430 >>gi|149030929|gb|EDL85956.1| E2F transcription factor 1 (432 aa) initn: 1531 init1: 1466 opt: 2193 Z-score: 2231.9 bits: 421.9 E(): 1.3e-115 Smith-Waterman score: 2193; 95.115% identity (98.851% similar) in 348 aa overlap (34-381:86-432) 10 20 30 40 50 60 mKIAA4 LQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGK :::::::::::::::::::::::::::::: gi|149 PRDPDVLLFATPQAPRPAPSAPRPALGRPPVKRRLDLETDHQYLAGSSGPFRGRGRHPGK 60 70 80 90 100 110 70 80 90 100 110 120 mKIAA4 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|149 GVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI 120 130 140 150 160 170 130 140 150 160 170 180 mKIAA4 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED ::::::::::::::::.::::::.:::::::::::::::::::::::::::::::::::: gi|149 QLIAKKSKNHIQWLGSRTMVGIGQRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED 180 190 200 210 220 230 190 200 210 220 230 240 mKIAA4 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL :: ::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|149 SDIQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSAETFQISLKSKQGPIDVFL 240 250 260 270 280 290 250 260 270 280 290 300 mKIAA4 CPEESADGISPGKTSCQETSSGEDRTADSGPAGPPPSPPSTSPALDPSQSLLGLEQEAVL ::::::.:::::.:: :::: ::::.:::: ::::::::::::.:::::::::::::::: gi|149 CPEESAEGISPGRTSYQETS-GEDRNADSGTAGPPPSPPSTSPTLDPSQSLLGLEQEAVL 300 310 320 330 340 350 310 320 330 340 350 360 mKIAA4 PRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEEGE ::.:.::.:::::.:::::::::::::::::::::::::::::::::::.:::::::::: gi|149 PRIGNLRAPMEEDRLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEAVDYHFGLEEGE 360 370 380 390 400 410 370 380 mKIAA4 GIRDLFDCDFGDLTPLDF :::::::::::::::::: gi|149 GIRDLFDCDFGDLTPLDF 420 430 >>gi|194224324|ref|XP_001499027.2| PREDICTED: similar to (351 aa) initn: 1503 init1: 1421 opt: 2031 Z-score: 2068.7 bits: 391.4 E(): 1.6e-106 Smith-Waterman score: 2031; 88.034% identity (94.587% similar) in 351 aa overlap (32-381:1-351) 10 20 30 40 50 60 mKIAA4 TQLQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHP . ::::::::::::::: :::: ::::::: gi|194 MTVKRRLDLETDHQYLAESSGPTRGRGRHP 10 20 30 70 80 90 100 110 120 mKIAA4 GKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLE 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 GIQLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLS :::::::::::::::::::. :::: :::::::::.::::::.:::::.:::::::.::: gi|194 GIQLIAKKSKNHIQWLGSHAAVGIGGRLEGLTQDLRQLQESERQLDHLIHICTTQLRLLS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 EDSDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDV ::.:.::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|194 EDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSETFQISLKSKQGPIDV 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 FLCPEESADGISPGKTSCQETSSGE-DRTADSGPAGPPPSPPSTSPALDPSQSLLGLEQE :::::::: ::::::: : :.::: ::.:. . . :::: ::.::: :::::::.:::: gi|194 FLCPEESAGGISPGKTLSQGTASGEEDRAANPATTVPPPSSPSSSPATDPSQSLLSLEQE 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 AVLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLE .: ::: ::.:..::.::::::::::::::.::::.::: ::::::::::::::::::: gi|194 PLLSRMGGLRAPVDEDRLSPLVAADSLLEHVREDFSSLLPEEFISLSPPHEALDYHFGLE 280 290 300 310 320 330 370 380 mKIAA4 EGEGIRDLFDCDFGDLTPLDF ::::::::::::::::::::: gi|194 EGEGIRDLFDCDFGDLTPLDF 340 350 >>gi|73992245|ref|XP_542963.2| PREDICTED: similar to E2F (571 aa) initn: 1437 init1: 1400 opt: 2015 Z-score: 2049.5 bits: 388.5 E(): 1.9e-105 Smith-Waterman score: 2015; 87.679% identity (94.269% similar) in 349 aa overlap (34-381:223-571) 10 20 30 40 50 60 mKIAA4 LQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGK ::::::::::::::: :::: ::::::::: gi|739 PRDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGK 200 210 220 230 240 250 70 80 90 100 110 120 mKIAA4 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI 260 270 280 290 300 310 130 140 150 160 170 180 mKIAA4 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED :::::::::::::::::. :::. :::::::::.::::::.:::::.:::::::.::.:: gi|739 QLIAKKSKNHIQWLGSHAAVGISGRLEGLTQDLRQLQESERQLDHLIHICTTQLRLLAED 320 330 340 350 360 370 190 200 210 220 230 240 mKIAA4 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL ::.::::::::::::::::::::::.::::::::::::.::::::::::::::::::::: gi|739 SDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAIDSSETFQISLKSKQGPIDVFL 380 390 400 410 420 430 250 260 270 280 290 300 mKIAA4 CPEESADGISPGKTSCQETSSGE-DRTADSGPAGPPPSPPSTSPALDPSQSLLGLEQEAV :::::: ::::::: : :.::: :: .: . . :::: : .::: :::::::.:::: . gi|739 CPEESAGGISPGKTPSQGTASGEEDRPVDPATTVPPPSSPPSSPASDPSQSLLSLEQEPL 440 450 460 470 480 490 310 320 330 340 350 360 mKIAA4 LPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEEG : ::: ::.:..::.:::::::::::::..:::::::: ::::::::::::::::::::: gi|739 LSRMGGLRAPVDEDRLSPLVAADSLLEHAREDFSGLLPEEFISLSPPHEALDYHFGLEEG 500 510 520 530 540 550 370 380 mKIAA4 EGIRDLFDCDFGDLTPLDF ::::::::::::::::::: gi|739 EGIRDLFDCDFGDLTPLDF 560 570 >>gi|194672360|ref|XP_615437.4| PREDICTED: E2F transcrip (437 aa) initn: 1412 init1: 1388 opt: 1990 Z-score: 2025.8 bits: 383.8 E(): 3.9e-104 Smith-Waterman score: 1990; 86.857% identity (93.714% similar) in 350 aa overlap (34-381:88-437) 10 20 30 40 50 60 mKIAA4 LQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGK :::::.::::::::: :::: ::::::::: gi|194 PRDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLNLETDHQYLAESSGPARGRGRHPGK 60 70 80 90 100 110 70 80 90 100 110 120 mKIAA4 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI 120 130 140 150 160 170 130 140 150 160 170 180 mKIAA4 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED .::::::::::::::::. :::. ::::::::::::::::::::::.: :.:::.::::: gi|194 HLIAKKSKNHIQWLGSHATVGISGRLEGLTQDLQQLQESEQQLDHLLHTCSTQLRLLSED 180 190 200 210 220 230 190 200 210 220 230 240 mKIAA4 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL .:.::::::::::::::::::::::.:::::::::::::::::.:::::::::::::::: gi|194 ADSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFL 240 250 260 270 280 290 250 260 270 280 290 300 mKIAA4 CPEESADGISPGKTSCQETSSGE-DRTADSGPA-GPPPSPPSTSPALDPSQSLLGLEQEA :::::. : ::::: : ..::: ::::: . : :::: : .::: :::::::.:::: gi|194 CPEESVGGTSPGKTPSQGAASGEEDRTADLATAVPPPPSSPRSSPATDPSQSLLSLEQEP 300 310 320 330 340 350 310 320 330 340 350 360 mKIAA4 VLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEE .: ::: ::.:..::.:::::::::::::::::::.::: :::.:::::::::::::::: gi|194 LLSRMGGLRAPVDEDRLSPLVAADSLLEHVKEDFSSLLPEEFITLSPPHEALDYHFGLEE 360 370 380 390 400 410 370 380 mKIAA4 GEGIRDLFDCDFGDLTPLDF :::::::::::::::::::: gi|194 GEGIRDLFDCDFGDLTPLDF 420 430 >>gi|400928|sp|Q01094.1|E2F1_HUMAN RecName: Full=Transcr (437 aa) initn: 1407 init1: 1407 opt: 1989 Z-score: 2024.8 bits: 383.6 E(): 4.5e-104 Smith-Waterman score: 1989; 86.857% identity (94.286% similar) in 350 aa overlap (34-381:88-437) 10 20 30 40 50 60 mKIAA4 LQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGK ::::::::::::::: :::: ::::::::: gi|400 PCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGK 60 70 80 90 100 110 70 80 90 100 110 120 mKIAA4 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|400 GVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI 120 130 140 150 160 170 130 140 150 160 170 180 mKIAA4 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED :::::::::::::::::: ::.: :::::::::.:::::::::::::.::::::.::::: gi|400 QLIAKKSKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 180 190 200 210 220 230 190 200 210 220 230 240 mKIAA4 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL .:.::::::::::::::::::::::.:::::::::::::::::.:::::::::::::::: gi|400 TDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFL 240 250 260 270 280 290 250 260 270 280 290 300 mKIAA4 CPEESADGISPGKTSCQE-TSSGEDRTADSGP-AGPPPSPPSTSPALDPSQSLLGLEQEA ::::.. ::::::: :: :: :.:..::. ..:::: : .: . :::::::.:::: gi|400 CPEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSLEQEP 300 310 320 330 340 350 310 320 330 340 350 360 mKIAA4 VLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEE .: ::: ::.:..::.::::::::::::::.:::::::: :::::::::::::::::::: gi|400 LLSRMGSLRAPVDEDRLSPLVAADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEE 360 370 380 390 400 410 370 380 mKIAA4 GEGIRDLFDCDFGDLTPLDF :::::::::::::::::::: gi|400 GEGIRDLFDCDFGDLTPLDF 420 430 >>gi|260574|gb|AAB24289.1| transcription factor E2F like (476 aa) initn: 1407 init1: 1407 opt: 1989 Z-score: 2024.2 bits: 383.6 E(): 4.8e-104 Smith-Waterman score: 1989; 86.857% identity (94.286% similar) in 350 aa overlap (34-381:127-476) 10 20 30 40 50 60 mKIAA4 LQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGK ::::::::::::::: :::: ::::::::: gi|260 PCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGK 100 110 120 130 140 150 70 80 90 100 110 120 mKIAA4 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|260 GVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI 160 170 180 190 200 210 130 140 150 160 170 180 mKIAA4 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED :::::::::::::::::: ::.: :::::::::.:::::::::::::.::::::.::::: gi|260 QLIAKKSKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 220 230 240 250 260 270 190 200 210 220 230 240 mKIAA4 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL .:.::::::::::::::::::::::.:::::::::::::::::.:::::::::::::::: gi|260 TDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFL 280 290 300 310 320 330 250 260 270 280 290 300 mKIAA4 CPEESADGISPGKTSCQE-TSSGEDRTADSGP-AGPPPSPPSTSPALDPSQSLLGLEQEA ::::.. ::::::: :: :: :.:..::. ..:::: : .: . :::::::.:::: gi|260 CPEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSLEQEP 340 350 360 370 380 390 310 320 330 340 350 360 mKIAA4 VLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEE .: ::: ::.:..::.::::::::::::::.:::::::: :::::::::::::::::::: gi|260 LLSRMGSLRAPVDEDRLSPLVAADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEE 400 410 420 430 440 450 370 380 mKIAA4 GEGIRDLFDCDFGDLTPLDF :::::::::::::::::::: gi|260 GEGIRDLFDCDFGDLTPLDF 460 470 >>gi|109092339|ref|XP_001103717.1| PREDICTED: similar to (502 aa) initn: 1406 init1: 1406 opt: 1988 Z-score: 2022.9 bits: 383.4 E(): 5.7e-104 Smith-Waterman score: 1988; 86.857% identity (94.286% similar) in 350 aa overlap (34-381:153-502) 10 20 30 40 50 60 mKIAA4 LQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGK ::::::::::::::: :::: ::::::::: gi|109 PCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGK 130 140 150 160 170 180 70 80 90 100 110 120 mKIAA4 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGI 190 200 210 220 230 240 130 140 150 160 170 180 mKIAA4 QLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSED :::::::::::::::::: ::.. ::::::.::.:::::::::::::.::::::.::::: gi|109 QLIAKKSKNHIQWLGSHTTVGVSGRLEGLTEDLRQLQESEQQLDHLMNICTTQLRLLSED 250 260 270 280 290 300 190 200 210 220 230 240 mKIAA4 SDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL .:.::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|109 TDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFL 310 320 330 340 350 360 250 260 270 280 290 300 mKIAA4 CPEESADGISPGKTSCQE-TSSGEDRTADSGP-AGPPPSPPSTSPALDPSQSLLGLEQEA ::::.. ::::::: :: :: :.:..::. ..:::: : .: . :::::::.:::: gi|109 CPEETVGGISPGKTPSQEATSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSLEQEP 370 380 390 400 410 420 310 320 330 340 350 360 mKIAA4 VLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEE .: ::: ::.:..::.::::::::::::::.:::::::: :::::::::::::::::::: gi|109 LLSRMGSLRAPVDEDRLSPLVAADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEE 430 440 450 460 470 480 370 380 mKIAA4 GEGIRDLFDCDFGDLTPLDF :::::::::::::::::::: gi|109 GEGIRDLFDCDFGDLTPLDF 490 500 >>gi|194044474|ref|XP_001926915.1| PREDICTED: similar to (376 aa) initn: 1474 init1: 1411 opt: 1985 Z-score: 2021.6 bits: 382.8 E(): 6.7e-104 Smith-Waterman score: 1985; 86.648% identity (93.750% similar) in 352 aa overlap (32-381:25-376) 10 20 30 40 50 60 mKIAA4 TQLQMVGLIFELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHP : ::::::::::::::: :::: ::::::: gi|194 MPCAPLLMVPGAASVGLSIPFIQHLLVKRRLDLETDHQYLAESSGPARGRGRHP 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 GKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLE 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 GIQLIAKKSKNHIQWLGSHTMVGIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLS :::::::::::::::::::. :::: ::::::::::::::::.:::::..::::::.::: gi|194 GIQLIAKKSKNHIQWLGSHAAVGIGGRLEGLTQDLQQLQESERQLDHLIQICTTQLHLLS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA4 EDSDTQRLAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDV ::.:.::::::::::::::::::::::.:::::::::::::::::.::::.::::::::: gi|194 EDADSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISFKSKQGPIDV 180 190 200 210 220 230 250 260 270 280 290 mKIAA4 FLCPEESADGISPGKTSCQETSSGED-RTADSGPA-GPPPSPPSTSPALDPSQSLLGLEQ :::::::. ::::::: : ..:::. :.:: : :::: : .::: :::::::.::: gi|194 FLCPEESTGGISPGKTPSQGVASGEEGRAADPTTAVPPPPSSPPASPATDPSQSLLSLEQ 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA4 EAVLPRMGHLRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGL : .: ::: ::.:..::.::::::::::::::.::::.::: ::::::::.::::::::: gi|194 EPLLSRMGGLRAPVDEDRLSPLVAADSLLEHVREDFSSLLPEEFISLSPPQEALDYHFGL 300 310 320 330 340 350 360 370 380 mKIAA4 EEGEGIRDLFDCDFGDLTPLDF :::::::::::::::::::::: gi|194 EEGEGIRDLFDCDFGDLTPLDF 360 370 381 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 01:21:08 2009 done: Tue Mar 17 01:27:25 2009 Total Scan time: 859.540 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]