Comparison of KIAA cDNA sequences between mouse and human (KIAA0060)
<<Original sequence data>>
mouse mKIAA0060 (mnh02088) length: 2142 bp, CDS: 3 - 827
human KIAA0060 (ha01541) length: 2613 bp, CDS: 318 - 1271
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 445 - 446 2 0 0.0
CDS: 447 - 1271 747 78 9.5
3'UTR: 1272 - 2693 786 480 37.9
amino acid
CDS: 447 - 1271 264 11 4.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mnh02088 1 .................................................. 1
ha01541 1 CGGGGACCTTCCTCGCGGGCCGGAGCGCGGAGCGCTGCCCCAGCCCTACG 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mnh02088 1 .................................................. 1
ha01541 51 GCACTCGGGGTCGGGACCCCGGGGAGCCGCCCTCACACATTTTCCAGGAG 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mnh02088 1 .................................................. 1
ha01541 101 GGATCGGAGGGGCGATGGGGTGGTAATGGGGGTGGGGGACACGCTGTACC 150
151 ----+----*----+----*----+----*----+----*----+----* 200
mnh02088 1 .................................................. 1
ha01541 151 CCACCGACGACCGCGCGGGCCACCTTCGCCTCTTTCCTTCACACTCCCAC 200
201 ----+----*----+----*----+----*----+----*----+----* 250
mnh02088 1 .................................................. 1
ha01541 201 TAACCGCAGTGCTGGGGGAACAAAATGTCCTCCTTCTGGAGCGATTACCT 250
251 ----+----*----+----*----+----*----+----*----+----* 300
mnh02088 1 .................................................. 1
ha01541 251 TTTCCCTTTTGTGCTTTGGGGGAAACTGAAGACCCAGAGGGGTTCGCAAA 300
301 ----+----*----+----*----+----*----+----*----+----* 350
mnh02088 1 .................................................. 1
ha01541 301 GCAAGTCTGTGAAGTAGGTACTATTGTCCCAATTTTTACATAGGAGGAAA 350
V L L S Q F L H R R K
351 ----+----*----+----*----+----*----+----*----+----* 400
mnh02088 1 .................................................. 1
ha01541 351 CGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGGTGGACAA 400
R L R E N L G P L T E V L Q V D K
401 ----+----*----+----*----+----*----+----*----+----* 450
A A
mnh02088 1 ............................................GGGCGG 6
||||||
ha01541 401 GATGAAGCTCATCATCCTGGAGCACTATTCTCAGGCGAGCGAGTGGGCGG 450
M K L I I L E H Y S Q A S E W A A
451 ----+----*----+----*----+----*----+----*----+----* 500
K Y I R N R I I Q F N P G P D K
mnh02088 7 CCAAGTATATTAGGAACCGTATCATCCAGTTTAACCCAGGGCCTGACAAG 56
| || || || |||||||||||||||||||||||||||||||| || |||
ha01541 451 CTAAATACATCAGGAACCGTATCATCCAGTTTAACCCAGGGCCAGAGAAG 500
K Y I R N R I I Q F N P G P E K
501 ----+----*----+----*----+----*----+----*----+----* 550
Y F T L G L P T G S T P L G C Y Q
mnh02088 57 TACTTCACCCTGGGGCTCCCCACTGGGAGCACCCCGCTTGGCTGCTACCA 106
||||||||||||||||||||||||||||| ||||| |||||||||||| |
ha01541 501 TACTTCACCCTGGGGCTCCCCACTGGGAGTACCCCACTTGGCTGCTACAA 550
Y F T L G L P T G S T P L G C Y K
551 ----+----*----+----*----+----*----+----*----+----* 600
K L I E Y Y K N G D L S F Q Y V K
mnh02088 107 GAAGCTGATCGAGTACTATAAGAATGGGGACCTGTCCTTTCAATATGTGA 156
||||||||| || ||||||||||||||||||||||||||| |||||||||
ha01541 551 GAAGCTGATTGAATACTATAAGAATGGGGACCTGTCCTTTAAATATGTGA 600
K L I E Y Y K N G D L S F K Y V K
601 ----+----*----+----*----+----*----+----*----+----* 650
T F N M D E Y V G L P R D H P E
mnh02088 157 AAACCTTCAACATGGACGAGTATGTGGGTCTTCCTCGAGACCACCCAGAG 206
| |||||||||||||| ||||| ||||| ||||||||||||||||| |||
ha01541 601 AGACCTTCAACATGGATGAGTACGTGGGCCTTCCTCGAGACCACCCGGAG 650
T F N M D E Y V G L P R D H P E
651 ----+----*----+----*----+----*----+----*----+----* 700
S Y H S F M W N N F F K H I D I H
mnh02088 207 AGTTACCACTCCTTCATGTGGAATAATTTCTTCAAGCACATTGACATCCA 256
||||||||||||||||||||||| || |||||||||||||||||||||||
ha01541 651 AGTTACCACTCCTTCATGTGGAACAACTTCTTCAAGCACATTGACATCCA 700
S Y H S F M W N N F F K H I D I H
701 ----+----*----+----*----+----*----+----*----+----* 750
P E N T H I L D G N A A D L Q A E
mnh02088 257 CCCTGAAAACACCCACATTTTGGATGGAAATGCGGCTGACCTGCAGGCCG 306
||| ||||||||||||||| ||||||| ||||| | ||||| ||||| |
ha01541 701 CCCAGAAAACACCCACATTCTGGATGGGAATGCAGTCGACCTACAGGCAG 750
P E N T H I L D G N A V D L Q A E
751 ----+----*----+----*----+----*----+----*----+----* 800
C D A F E E K I Q A A G G I E L
mnh02088 307 AGTGTGACGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGATCGAACTC 356
| ||||| |||||||| ||||||||| ||||||| || |||||||| ||
ha01541 751 AATGTGATGCCTTTGAAGAGAAGATCAAGGCTGCAGGTGGGATCGAGCTA 800
C D A F E E K I K A A G G I E L
801 ----+----*----+----*----+----*----+----*----+----* 850
F V G G I G P D G H I A F N E P G
mnh02088 357 TTTGTCGGAGGCATTGGCCCCGATGGACACATTGCCTTCAATGAGCCAGG 406
||||| |||||||| ||||| |||||||||||||||||||| ||||||||
ha01541 801 TTTGTTGGAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGG 850
F V G G I G P D G H I A F N E P G
851 ----+----*----+----*----+----*----+----*----+----* 900
S S L V S R T R V K T L A M D T I
mnh02088 407 CTCCAGCCTGGTGTCCAGGACCCGTGTGAAGACTCTGGCTATGGACACCA 456
|||||| |||||||||||||||||||||||||| ||||| ||||| ||||
ha01541 851 CTCCAGTCTGGTGTCCAGGACCCGTGTGAAGACGCTGGCCATGGATACCA 900
S S L V S R T R V K T L A M D T I
901 ----+----*----+----*----+----*----+----*----+----* 950
L A N A R F F D G D L A K V P T
mnh02088 457 TCCTGGCCAACGCTAGGTTCTTTGATGGTGATCTTGCCAAGGTGCCCACC 506
|||||||||| ||||||||||| ||||| || || ||||||||||||||
ha01541 901 TCCTGGCCAATGCTAGGTTCTTCGATGGAGAACTCACCAAGGTGCCCACC 950
L A N A R F F D G E L T K V P T
951 ----+----*----+----*----+----*----+----*----+----* 1000
M A L T V G V G T V M D A K E V M
mnh02088 507 ATGGCCCTGACAGTGGGGGTCGGCACTGTCATGGATGCTAAAGAGGTGAT 556
|||||| |||| |||||||| ||||||||||||||||||| |||||||||
ha01541 951 ATGGCCTTGACGGTGGGGGTGGGCACTGTCATGGATGCTAGAGAGGTGAT 1000
M A L T V G V G T V M D A R E V M
1001 ----+----*----+----*----+----*----+----*----+----* 1050
I L I T G A H K A F A L Y K A I E
mnh02088 557 GATCCTCATCACAGGCGCTCACAAGGCCTTTGCTCTGTACAAAGCCATCG 606
|||||| |||||||| ||||||||||| |||||||||||||| |||||||
ha01541 1001 GATCCTTATCACAGGTGCTCACAAGGCATTTGCTCTGTACAAGGCCATCG 1050
I L I T G A H K A F A L Y K A I E
1051 ----+----*----+----*----+----*----+----*----+----* 1100
E G V N H M W T V S A F Q Q H P
mnh02088 607 AGGAGGGCGTGAACCACATGTGGACGGTGTCCGCCTTTCAGCAGCACCCC 656
||||||| ||||||||||||||||| ||||| ||||| |||||||| |||
ha01541 1051 AGGAGGGAGTGAACCACATGTGGACCGTGTCTGCCTTCCAGCAGCATCCC 1100
E G V N H M W T V S A F Q Q H P
1101 ----+----*----+----*----+----*----+----*----+----* 1150
R T V F V C D E D A T L E L K V K
mnh02088 657 CGCACTGTGTTTGTGTGTGACGAGGACGCCACCTTGGAACTAAAAGTGAA 706
||||| |||||||||||||||||||| ||||||||||| || ||||||||
ha01541 1101 CGCACCGTGTTTGTGTGTGACGAGGATGCCACCTTGGAGCTGAAAGTGAA 1150
R T V F V C D E D A T L E L K V K
1151 ----+----*----+----*----+----*----+----*----+----* 1200
T V K Y F K G L M L V H N K L V D
mnh02088 707 GACAGTCAAATATTTCAAAGGTTTAATGCTTGTTCATAACAAGCTGGTGG 756
||| ||||| ||||||||||||||||||||||||||||||||| ||||||
ha01541 1151 GACTGTCAAGTATTTCAAAGGTTTAATGCTTGTTCATAACAAGTTGGTGG 1200
T V K Y F K G L M L V H N K L V D
1201 ----+----*----+----*----+----*----+----*----+----* 1250
P L Y S I K E K E I Q K S Q S A
mnh02088 757 ACCCCCTGTACAGTATCAAGGAGAAGGAAATTCAGAAAAGCCAATCTGCG 806
||||| ||||||||||||| ||||| |||| | |||||||||||||| ||
ha01541 1201 ACCCCTTGTACAGTATCAAAGAGAAAGAAACTGAGAAAAGCCAATCTTCG 1250
P L Y S I K E K E T E K S Q S S
1251 ----+----*----+----*----+----*----+----*----+----* 1300
K K P Y S D *
mnh02088 807 AAGAAGCCATACAGTGACTAGCCTGTGCCAGGACGTGGTATTCAGTACCT 856
||||| |||||||| || |||||||||| |||| | || | ||||||
ha01541 1251 AAGAAACCATACAGCGATTAGCCTGTGCTGGGACCTAGTGTCAAGTACC. 1299
K K P Y S D *
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mnh02088 857 CAGAGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAG 906
|| ||||| ||||||||||||| |||| | ||| ||| ||| ||| | |
ha01541 1300 CATAGGGAAAGGCAGGTCTTTCTGGAAATTGTCTTTAGAAGAAAGAATTG 1349
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mnh02088 907 AATTACTTTTCAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGAT 956
||| |||| | || | | ||| | || ||||| |||| |
ha01541 1350 TATTTCTTT..AATCTAGTATGGTTACTCCAGATAAGTGGGT........ 1389
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mnh02088 957 ACATGTTAAGGAGTTTGGCTATGGAGAACATTGTTGATTATAATTTTCCC 1006
| ||| | ||||| ||| |
ha01541 1390 .GAACTTATTGTTCTTGGCCATGAGG........................ 1414
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mnh02088 1007 CTTTTTTTTTCAGTACTGGGGGCTGAACCTGGGGCCTTGTACATGCCAAG 1056
||||| || | | || || || ||
ha01541 1415 ...............CTGGGAGCCTAGTCACGGAGTTTAGCTATAGGGAG 1449
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mnh02088 1057 GAGGTGCCTTGCTAACTGAG.....CTATGTCCCCAACTTTCTGCCCCTT 1101
| || | || | | || || || ||| | || |
ha01541 1450 AATGTTTGTAACTTAATCAGAAAAAAAATATCTGCAAAATGTACTCCATC 1499
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mnh02088 1102 TTCATAATGGTTTTGTAACCATCCGAAGTCTCCATCACTGACTGTAATTA 1151
| | ||| | | | | || | || | | | | |
ha01541 1500 ATTCTGATG....TCTGCCAAACCCAGGTTGGGAGTTTTAAACTTTTTGT 1545
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mnh02088 1152 TATTCTTCTGCCCCTGTGCACATGGGCAGCACACGCCTGTCGAGAACTCC 1201
| | |||| ||| || |||| ||||| || ||| ||| | |
ha01541 1546 TCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTTC 1595
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mnh02088 1202 TGTCTGTATGTGTGCTTTTTCTAGAGTTGGCAGGGATTA.GGGCTTGTGC 1250
| || || | || || | ||| || || |||| |||||| ||
ha01541 1596 TCTCCTTACACGCACTGATTTTCAAGTGGGAGGGAATTAGGGGCTTATGT 1645
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mnh02088 1251 ACTTTGGACATAACCTTTCTGGAGACTTGAGAGCCCCTCTTCTGCCAGCC 1300
| ||||| | |||| |||||||| || |||| | |||
ha01541 1646 ATATTGGATACCACCT.........CTTGAGAGTCCTTCTTGCACAGGCC 1686
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mnh02088 1301 TTCCC....ACTGAGAA.....TTTTCATTTTAAAGAATACACTTCCAGA 1341
| ||| |||||| || || | || | | | ||| ||
ha01541 1687 TGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAAT 1736
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mnh02088 1342 ACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAACCT 1391
| | || || | ||||||||||| | | | ||| | |||| |
ha01541 1737 ATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAA 1786
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mnh02088 1392 GGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTT 1441
|| |||| | |||||| | | | | | || || ||
ha01541 1787 TGGAAAGAAAACGATCCCTTCCTTC......TTCCACTTTCACAGCTTTT 1830
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mnh02088 1442 GTCAGTAGCTAGCCTTTCTGTAAACAGGCCTTCTGGGCATGTGGGGCTA. 1490
|| | | | ||| | | |||| ||||||| |
ha01541 1831 TTCTGAACTAGGAGAACCTG...GGGGTGGATTTGGGTGGGTGGGGCCAA 1877
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mnh02088 1491 ..AGATGGCTTTCACAGGTAAACTCAAAGCTTCCAAAGG.CCAGCCTTGT 1537
|| ||||| | | |||| || ||| || | || |||||| ||
ha01541 1878 AGAGGAGGCTTCTATTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACGT 1927
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mnh02088 1538 C...TTGTTCTCTCTCAAG........ATTCCAACAAGAGAAAAGTGGAA 1576
| | |||| |||| | | | | ||| | ||| | |
ha01541 1928 CAAACTTCTCTCCCTCAGGGACTCTCCAGCACCAAAAGGCAGAAGGTGGA 1977
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mnh02088 1577 AGGCCT.....CCTGTCTGAGCTCTGTTTTCCTCAACAGATTC....... 1614
|| | | || | || |||||| | || | ||
ha01541 1978 AGCCGTTTTTCCCCCAGAGCCCTGTGTTTTTGTGAAAGGCCTCACTGTGG 2027
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mnh02088 1615 ..........TTACACACTCCCTAGTAA...GGAGATCCGCGTGGGTCAC 1651
||||| |||| |||||| |||| ||| | ||| ||
ha01541 2028 CTCCTCTGTTTTACATACTCATTAGTAAGTGGGAGGTCCACTGGGGCAAC 2077
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mnh02088 1652 AGACAC.GCTATGATTTCAGTGTT...TTTACCCAAGGTGGGGAGCTG.. 1695
|||||| || | ||||||||||| || | |||||| | | |||
ha01541 2078 AGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGA 2127
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mnh02088 1696 ..........................ACATCTGCACATGCGCTGTGCTCT 1719
||| || | | | | |||||
ha01541 2128 CAGGCAGCTTAAGTGTGAGTTTAGTCACAACTCCTGA.GTGTCCCGCTCT 2176
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mnh02088 1720 GTGGCCT.CCTCAGAGCTGAGTGCCAAGATTATACA........TGCTAC 1760
|| | ||| ||| ||||||||| || ||||| | |||
ha01541 2177 CCTGCTTACCTAGGAGGTGAGTGCCAGGAAAATACACCAAATGCTTCTAG 2226
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mnh02088 1761 TGCTCTCTCCTCGCTTAACTCACCCCAGCACTCCCACCTTCGGGTTTATA 1810
| | | ||| | ||||| | || || | || | |
ha01541 2227 TATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTC 2276
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mnh02088 1811 TCCTCTGTCCTCAGCATCAG..AACTAAACCCTTCACCCCCCTGTCCTTC 1858
| | | |||||||| || ||||||| ||| | || |
ha01541 2277 TGATGTTCTGAGAGCATCAGGAAATACAACCCTTTTGCCCATTTACCCTT 2326
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mnh02088 1859 AGGCTCCCTTCCCAGGCTCCTCTGCT....TGGCCTTGCTTTATCTTCTC 1904
| | ||||| | | |||| | |||| | || || |||
ha01541 2327 CTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGGCTTCCTTTCATTGTCTT 2376
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mnh02088 1905 TGCCTCTGTGGAGTAGTCAGCTGCCTCCTTCT..CCGTCCTTGTGCCTGT 1952
| | | | | |||||||||| || | || ||||||||||
ha01541 2377 AGGCCTTCATGGAGTGGATGCTGCCTCCTCCTGGCTGTTTTTGTGCCTGT 2426
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mnh02088 1953 CTGAAGCTAGAGCTGCCT..ATTTCCAGGAGAGGTCTTTCAGAACATTGC 2000
|||||||| ||||||| ||||| ||| || |||| ||| | | ||
ha01541 2427 TTGAAGCTACTGCTGCCTCCATTTCTGGGAAAGACCTTTGAGAGCCTAGC 2476
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mnh02088 2001 CCAGGCCCCTCCAGAAGTACTGTGTTTGGTACCAGCA.TTTGTTTGTAGT 2049
||||||| ||| || ||||||||||||| | ||||| | |||
ha01541 2477 CCAGGCC......TAAGGGCTATGTTTGGTACCAGTATTTTGTCTTTAGC 2520
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mnh02088 2050 TTTTATATGTGATTGTGCTATTGTTCTGTGTTAAGCTAATGGATCAATGG 2099
|||| ||||||||||||| | |||||| ||||||| ||||||||||||
ha01541 2521 TTTTCTATGTGATTGTGCCGTCATTCTGTTTTAAGCTCATGGATCAATGG 2570
2651 ----+----*----+----*----+----*----+----*--- 2693
mnh02088 2100 ACTTGTTTACAATGTGATATTTTCTATTAAATTTAATATTTTC 2142
| |||||||||||||||||||||||||||||| | ||||||
ha01541 2571 ATTTGTTTACAATGTGATATTTTCTATTAAATCCAGTATTTTG 2613