FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0136.ptfa, 984 aa vs ./tmplib.26680 library 1768033 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.3705+/-0.00527; mu= 10.8837+/- 0.348 mean_var=193.4105+/-47.578, 0's: 0 Z-trim: 6 B-trim: 25 in 1/35 Lambda= 0.0922 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0852 ( 1035 res) meh00434 (1035) 439 72 5.1e-13 >>mKIAA0852 ( 1035 res) meh00434 (1035 aa) initn: 777 init1: 248 opt: 439 Z-score: 326.0 bits: 71.9 E(): 5.1e-13 Smith-Waterman score: 854; 26.164% identity (31.680% ungapped) in 1074 aa overlap (43-978:6-1030) 20 30 40 50 60 70 mKIAA0 SGRGVEARGGLVASQSGCGRGRSWLCSSLKMAAQPPTGIRLSALCPKFLHTNSTSHTWPF :: ... . : ..::::::.: . : mKIAA0 RLIAVMAFTNYSSLNRAQLTFEYLHTNSTTHEFLF 10 20 30 80 90 100 110 120 130 mKIAA0 SAVAELIDNAYDPDVNAKQIWIDKTV-ISDHICLTFTDNGNGMTADKLHKMLSFGFSDKV .:.:::.::: : :.. .:. .. . . : : :.: :: . ....:: : : mKIAA0 GALAELVDNARDADATRIDIYAERREDLRGGFMLCFLDDGAGMDPSDAASVIQFGKSAKR 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 TMNGHVPVGLYGNGFKSGSMRLGKDAMVFTKNGETMSVGFLSQTYLEVIKAEHVVVPIVT : .. . .: ::::.::::::.::: ..:::. .::. :::.:. : ..:.::. : mKIAA0 TPES-TQIGQYGNGLKSGSMRIGKDFILFTKKEDTMTCLFLSRTFHEEEGIDEVIVPLPT 100 110 120 130 140 150 200 210 220 230 240 mKIAA0 FN-KHRQMI--NLTESKASLAAILEHSLFSTEQKLLAELNAIMGKKGTRIIIWNLRSYKN .: . :. : :. . . ..: : ::.... .. : :..:: .::.::. . : mKIAA0 WNARTREPITDNVEKFAIETELVYKYSPFHTEEQVMNQFMKIPGNSGTLVIIFNLKLMDN 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 AT-EFDFEKDKYDIRIPEDLDETAGRKGYKKQERMDQIAPESDYSLRAYCSILYLKPRMQ . :.:. .. ::.. : : : : ..: :.::: ..::. :::. mKIAA0 GEPELDIISNPKDIQMAETSPE-----GTKPERR----------SFRAYAAVLYIDPRMR 220 230 240 250 310 320 330 mKIAA0 IIIRGQKVKTQLVSKSL--------------AYIERDVYRPKF----------------- :.:.:.::.:. .: : . :..: . . mKIAA0 IFIHGHKVQTKRLSCCLYKPRMYKYTSSRFKTRAEQEVKKAEHVARIAEEKAREAESKAR 260 270 280 290 300 310 340 mKIAA0 ---------LTRTVRI--------------------------------------TFGFNC ::: :. .:: : mKIAA0 TLEVRMGGDLTRDSRVMLRQVQNTAITLRREADVKKRIKDAKQRALKEPKELNFVFGVNI 320 330 340 350 360 370 350 360 370 380 390 400 mKIAA0 RNKDHYGIMMYHKNRLIKAYEKVGCQLKANNMGVGVVGIIECNF--LKPTHNKQDFDYTN ...: :...:. .:::: ::::: ::... ::::... . :.:::::::: .. mKIAA0 EHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACGGVVGVVDVPYLVLEPTHNKQDFADAK 380 390 400 410 420 430 410 420 430 440 450 mKIAA0 EYRLTILALGEKLNDYWNEMKVKK---------------NAEYPVNLPVEDIQKRPDQ-- ::: . :.::.: .::... . . : . : . .. ..: . mKIAA0 EYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSELRFKRRRAMEIP 440 450 460 470 480 490 460 470 480 490 500 mKIAA0 TWVQCDACLKWRKLPDGIDQL----PEKWYCSNNPDPQFRNCEVPEEPEDEDL----VHP : .::: ::::: :: .... :. : :: ::::. ::. :. . : : mKIAA0 TTIQCDLCLKWRTLPFQLSSVETDYPDTWVCSMNPDPEQDRCEASEQKQKVPLGTLKKDP 500 510 520 530 540 550 510 520 530 540 550 560 mKIAA0 TYEKTYKKTSKERFRIRQP--EILPRILPQINPELLYQTSVSSQSFSPVKESVPRPHLSE .. .: :..: .: : : . : . : . . . :..: : ::. . mKIAA0 KTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTT-RPIEEPVRRPQRPR 560 570 580 590 600 610 570 580 590 600 610 mKIAA0 VTSPFAARIINLNLASPASE-PENSSMKRKLGVHSSILNAKTRRLSNPPV-----ENSSY . :. : : : :. . :. :.. :: .: : : .::. :.:. mKIAA0 -SPPLPAVIKNAPSRPPSIQTPRPSTQLRKTSVIS---------LPKPPTTAARGETSTS 620 630 640 650 660 620 630 640 650 660 mKIAA0 KNDDDEDVIILEEN----STPKPAVDLEVKSDIEVKSEQSHTE---QSGIHVDLVSSPKP . . .. : ..:.:. ... . : .: : :..:.. .:..:.: mKIAA0 RLLQPTEAPRKPANPPIKTVPRPTPPVHTPPLSLIPSSKSLREVPAQKAIKTPVVKKPEP 670 680 690 700 710 720 670 680 690 700 710 720 mKIAA0 CVQASSTSTSTSRSDPGITVSTQTDAPGLTVKKEESMEEDMGVRNGTATLSCVGTEA-KV :. : .... .:: ..:: . .: .::. .. . : ... :: .. mKIAA0 PVKQSVATSGRKRS---LAVSDEEEA------EEEAEKRRERCKRGKLAVKEEKKEANEL 730 740 750 760 770 730 740 750 760 770 780 mKIAA0 QETSAESVDATSHQLQELRSELLVVTQERDDYK-RQCQMFTDQIQVLQQRLLEM--NDKC .....:. : .. :. .. . : .:. : : . . . : . ... .: mKIAA0 SDSAGEDHPAELRKAQKDKGLHVEVRVNREWYTGRVTAVEVGKNAVRWKVKFDYVPTDTT 780 790 800 810 820 830 790 800 810 820 830 840 mKIAA0 VKKEKCHQSTETDAVFLLDSVNGQAESLDHLGSQYQQALQEIERLKRQCSALQQVKS--- . . ....: .. : . :. . .. :.. ..:. . :: :: . .. mKIAA0 PRDRWVEKGSEDVRLMKPPSPEHQSPDTQQEGGEEEEAM-----VARQAVALPEPSTSDG 840 850 860 870 880 890 850 860 870 880 890 mKIAA0 ---ECSQASCTESKSEVDEMAVQLDDVFRQLDKCTIERDQYKNEVQLLEIEKSHIHSQCE : . .. . :. .: .. : . .: . .. . :.:..... :. : mKIAA0 LPIEPDTTATSPSHETIDLLVQILRNCLRYFLPPSFPIS--KKELSVMNSEELISFPLKE 900 910 920 930 940 950 900 910 920 930 940 950 mKIAA0 EL-QTEVE-QLKSTGQQAAADGSTASNAEEPVSYVDGESLKLRSLRVNVGQLLAMIVPDL . : :: : . :. :: : :. .:: : .:. ::: . .. .: . :: : mKIAA0 YFKQYEVGLQNLCHSYQSRAD-SRAKASEE--SLRTSEK-KLRETEEKLQKLRTNIVALL 960 970 980 990 1000 960 970 980 mKIAA0 DLQQVNYDVDV-VDEILGQVVEQMSEISST :.:. :.:. .:. : .:.. mKIAA0 --QKVQEDIDINTDDELDAYIEDLITKGD 1010 1020 1030 984 residues in 1 query sequences 1768033 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:12:54 2006 done: Mon Mar 27 10:12:56 2006 Scan time: 1.000 Display time: 0.100 Function used was FASTA [version 3.4t11 Apr 17, 2002]