# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mlk02300.fasta.nr -Q ../query/mFLJ00296.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00296, 397 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920883 sequences Expectation_n fit: rho(ln(x))= 5.0091+/-0.000183; mu= 11.4660+/- 0.010 mean_var=68.0256+/-13.108, 0's: 36 Z-trim: 39 B-trim: 0 in 0/67 Lambda= 0.155503 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|60359826|dbj|BAD90132.1| mFLJ00296 protein [Mus ( 397) 2721 619.2 4.9e-175 gi|116284037|gb|AAH28870.1| Wdr73 protein [Mus mus ( 262) 1752 401.7 9.7e-110 gi|81916825|sp|Q9CWR1.1|WDR73_MOUSE RecName: Full= ( 371) 1753 402.1 1.1e-109 gi|74143760|dbj|BAE41211.1| unnamed protein produc ( 371) 1753 402.1 1.1e-109 gi|149057340|gb|EDM08663.1| neuromedin B (predicte ( 371) 1582 363.7 3.8e-98 gi|74758274|sp|Q6P4I2.1|WDR73_HUMAN RecName: Full= ( 378) 1365 315.0 1.8e-83 gi|40225582|gb|AAH14115.1| WDR73 protein [Homo sap ( 380) 1365 315.0 1.8e-83 gi|55930876|gb|AAH50648.1| WDR73 protein [Homo sap ( 386) 1365 315.0 1.8e-83 gi|119622352|gb|EAX01947.1| WD repeat domain 73, i ( 404) 1365 315.0 1.9e-83 gi|114658646|ref|XP_001162099.1| PREDICTED: WD rep ( 378) 1364 314.8 2.1e-83 gi|6841178|gb|AAF28942.1|AF161382_1 HSPC264 [Homo ( 388) 1363 314.6 2.5e-83 gi|14042736|dbj|BAB55373.1| unnamed protein produc ( 378) 1360 313.9 3.8e-83 gi|149690930|ref|XP_001498458.1| PREDICTED: WD rep ( 372) 1350 311.6 1.8e-82 gi|73951569|ref|XP_851953.1| PREDICTED: hypothetic ( 427) 1345 310.6 4.3e-82 gi|119913668|ref|XP_001255635.1| PREDICTED: WD rep ( 301) 1312 303.1 5.6e-80 gi|26334422|dbj|BAC25093.1| unnamed protein produc ( 203) 1219 282.1 7.9e-74 gi|26330151|dbj|BAC28814.1| unnamed protein produc ( 312) 1220 282.4 9.4e-74 gi|109082242|ref|XP_001084838.1| PREDICTED: simila ( 314) 1133 262.9 7.1e-68 gi|149057338|gb|EDM08661.1| neuromedin B (predicte ( 310) 1099 255.3 1.4e-65 gi|149057337|gb|EDM08660.1| neuromedin B (predicte ( 340) 1099 255.3 1.5e-65 gi|126273618|ref|XP_001364312.1| PREDICTED: simila ( 447) 1078 250.7 4.8e-64 gi|114658648|ref|XP_001162062.1| PREDICTED: WD rep ( 323) 941 219.8 6.7e-55 gi|118112501|ref|XP_423425.2| PREDICTED: hypotheti ( 273) 718 169.8 6.8e-40 gi|224044330|ref|XP_002187555.1| PREDICTED: simila ( 394) 711 168.3 2.7e-39 gi|57032841|gb|AAH88871.1| Wdr73-prov protein [Xen ( 375) 695 164.7 3.1e-38 gi|21748500|dbj|BAC03387.1| FLJ00296 protein [Homo ( 187) 691 163.6 3.4e-38 gi|194379960|dbj|BAG58332.1| unnamed protein produ ( 212) 691 163.6 3.7e-38 gi|84708816|gb|AAI11335.1| WD repeat domain 73-lik ( 160) 682 161.5 1.2e-37 gi|160221323|sp|A5D8Q8.2|WDR73_XENLA WD repeat-con ( 369) 658 156.4 9.7e-36 gi|146327113|gb|AAI41774.1| Wdr73 protein [Xenopus ( 377) 658 156.4 9.8e-36 gi|119622350|gb|EAX01945.1| WD repeat domain 73, i ( 158) 577 138.0 1.5e-30 gi|47214529|emb|CAG04549.1| unnamed protein produc ( 268) 463 112.5 1.1e-22 gi|82229949|sp|Q567G2.1|WDR73_DANRE RecName: Full= ( 376) 385 95.2 2.7e-17 gi|148675025|gb|EDL06972.1| mCG15313, isoform CRA_ ( 51) 248 63.8 1e-08 gi|149628089|ref|XP_001521119.1| PREDICTED: hypoth ( 409) 236 61.8 3.3e-07 gi|193674046|ref|XP_001946786.1| PREDICTED: hypoth ( 372) 180 49.2 0.0019 >>gi|60359826|dbj|BAD90132.1| mFLJ00296 protein [Mus mus (397 aa) initn: 2721 init1: 2721 opt: 2721 Z-score: 3298.8 bits: 619.2 E(): 4.9e-175 Smith-Waterman score: 2721; 100.000% identity (100.000% similar) in 397 aa overlap (1-397:1-397) 10 20 30 40 50 60 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP 250 260 270 280 290 300 310 320 330 340 350 360 mFLJ00 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|603 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDS 310 320 330 340 350 360 370 380 390 mFLJ00 APLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS ::::::::::::::::::::::::::::::::::::: gi|603 APLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS 370 380 390 >>gi|116284037|gb|AAH28870.1| Wdr73 protein [Mus musculu (262 aa) initn: 1752 init1: 1752 opt: 1752 Z-score: 2126.5 bits: 401.7 E(): 9.7e-110 Smith-Waterman score: 1758; 91.901% identity (91.901% similar) in 284 aa overlap (114-397:1-262) 90 100 110 120 130 140 mFLJ00 GFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVREDNAEPGKKHLSQGTAQFLSTTCNQ :::::::: gi|116 MWQVREDN---------------------- 150 160 170 180 190 200 mFLJ00 DVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGARLSGLRTVDVESQKITYSSGTADS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 DVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGARLSGLRTVDVESQKITYSSGTADS 10 20 30 40 50 60 210 220 230 240 250 260 mFLJ00 ESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALETVSPGSGSSGERWCAEVRNKGQGP ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|116 ESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALETVSPGSGCSGERWCAEVRNKGQGP 70 80 90 100 110 120 270 280 290 300 310 320 mFLJ00 GPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSPDPELLRVTWAPGLDNCLAISGFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSPDPELLRVTWAPGLDNCLAISGFD 130 140 150 160 170 180 330 340 350 360 370 380 mFLJ00 GTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDSAPLVTTHTWHPRKPRTLLSAASD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDSAPLVTTHTWHPRKPRTLLSAASD 190 200 210 220 230 240 390 mFLJ00 SSLHVWDWVDLQAS :::::::::::::: gi|116 SSLHVWDWVDLQAS 250 260 >>gi|81916825|sp|Q9CWR1.1|WDR73_MOUSE RecName: Full=WD r (371 aa) initn: 1752 init1: 1752 opt: 1753 Z-score: 2125.6 bits: 402.1 E(): 1.1e-109 Smith-Waterman score: 2493; 94.148% identity (94.148% similar) in 393 aa overlap (5-397:1-371) 10 20 30 40 50 60 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 MELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR : ::::::::::::::::::::::::::::::::::::: gi|819 N----------------------DVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR 120 130 140 150 190 200 210 220 230 240 mFLJ00 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 VSPGSGCSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDS 280 290 300 310 320 330 370 380 390 mFLJ00 APLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS ::::::::::::::::::::::::::::::::::::: gi|819 APLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS 340 350 360 370 >>gi|74143760|dbj|BAE41211.1| unnamed protein product [M (371 aa) initn: 1752 init1: 1752 opt: 1753 Z-score: 2125.6 bits: 402.1 E(): 1.1e-109 Smith-Waterman score: 2483; 93.893% identity (94.148% similar) in 393 aa overlap (5-397:1-371) 10 20 30 40 50 60 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|741 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKRVPDTRLLVTSGLPGCYIQMWQVRED 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR : ::::::::::::::::::::::::::::::::::::: gi|741 N----------------------DVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR 120 130 140 150 190 200 210 220 230 240 mFLJ00 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VSPGSGCSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDS 280 290 300 310 320 330 370 380 390 mFLJ00 APLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS ::::::::::::::::::::::::::::::::::::: gi|741 APLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS 340 350 360 370 >>gi|149057340|gb|EDM08663.1| neuromedin B (predicted), (371 aa) initn: 1582 init1: 1582 opt: 1582 Z-score: 1918.3 bits: 363.7 E(): 3.8e-98 Smith-Waterman score: 2298; 86.768% identity (91.349% similar) in 393 aa overlap (5-397:1-371) 10 20 30 40 50 60 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL ::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 MELAEDWLVESLRLYQDFHAFDLSGATRVLEWVGEKGVFVAGYESLKKNEILHLIL 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED ::::::.:::::.:::::::::::::::.::::::::::::::::::::::::.::.::: gi|149 PLRLSVKENQGLYPERDFKVRHGGFSDRAVFDLKHVPDTRLLVTSGLPGCYIQVWQIRED 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR : :::::::::::::::::::::::.::: ::::::::: gi|149 N----------------------DVIEAVSTIDVQDKEESLWPRVSIFCSAAPGILHGAR 120 130 140 150 190 200 210 220 230 240 mFLJ00 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET :::::::::::.:::::: :.:::::: ::::::.::::::.:::::::::::::: ::: gi|149 LSGLRTVDVESRKITYSSDTTDSESLSSLQVLDADTFAFCGTSGRLGLVDTRQKWAPLET 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP ::: .::::::::::::.:::::::::::::::::::::: ::: ::::::::::: :: gi|149 VSPRAGSSGERWCAEVRSKGQGPGPCIASLGSDGQLCLLDPRNLRDPVSSAQCPVFKSSP 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQAEPLFTHKGHIFLDGNDVDS ::::::::::::::::::::::::::::::::::::::::.: :: ::::::::::.:.: gi|149 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQVEALFIHKGHIFLDGNEVES 280 290 300 310 320 330 370 380 390 mFLJ00 APLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS ::::::::::: :::::::::::..:::::::::::: gi|149 APLVTTHTWHPSKPRTLLSAASDAALHVWDWVDLQAS 340 350 360 370 >>gi|74758274|sp|Q6P4I2.1|WDR73_HUMAN RecName: Full=WD r (378 aa) initn: 2067 init1: 1052 opt: 1365 Z-score: 1655.0 bits: 315.0 E(): 1.8e-83 Smith-Waterman score: 1999; 74.372% identity (85.176% similar) in 398 aa overlap (5-396:1-376) 10 20 30 40 50 60 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL :. ..:::::::::::::.:::::::::::::: .::::::::::::::::::: : gi|747 MDPGDDWLVESLRLYQDFYAFDLSGATRVLEWIDDKGVFVAGYESLKKNEILHLKL 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED ::::::.::.:: ::::::::::::::::.::::::: :::::::::::::.:.::: :: gi|747 PLRLSVKENKGLFPERDFKVRHGGFSDRSIFDLKHVPHTRLLVTSGLPGCYLQVWQVAED 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR . :::.::::: :..:::::::::.:: . :::.::::: gi|747 S----------------------DVIKAVSTIAVHEKEESLWPRVAVFSTLAPGVLHGAR 120 130 140 150 190 200 210 220 230 240 mFLJ00 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET : .:..::.::.: ::.: ..::: :: ::::::.::::: :::::::::::::: ::. gi|747 LRSLQVVDLESRKTTYTSDVSDSEELSSLQVLDADTFAFCCASGRLGLVDTRQKWAPLEN 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP ::: ::.:::::::: . :::::: ::::::::.::::: :.:::::::.:::: ::: gi|747 RSPGPGSGGERWCAEVGSWGQGPGPSIASLGSDGRLCLLDPRDLCHPVSSVQCPVSVPSP 220 230 240 250 260 270 310 320 330 340 350 mFLJ00 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQ------AEPLFTHKGHIFLD ::::::::::::: :::::::::::::.::.::::: ..: .::::::.:::::: gi|747 DPELLRVTWAPGLKNCLAISGFDGTVQVYDATSWDGTRSQDGTRSQVEPLFTHRGHIFLD 280 290 300 310 320 330 360 370 380 390 mFLJ00 GNDVDSAPLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS :: .: ::::::::::: .:::::::..:.:::::::::: : gi|747 GNGMDPAPLVTTHTWHPCRPRTLLSATNDASLHVWDWVDLCAPR 340 350 360 370 >>gi|40225582|gb|AAH14115.1| WDR73 protein [Homo sapiens (380 aa) initn: 2006 init1: 1052 opt: 1365 Z-score: 1655.0 bits: 315.0 E(): 1.8e-83 Smith-Waterman score: 1935; 73.214% identity (83.929% similar) in 392 aa overlap (11-396:9-378) 10 20 30 40 50 60 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL : . . ::::.:::::::::::::: .::::::::::::::::::: : gi|402 WILGTTGWWNPCACKSYQDFYAFDLSGATRVLEWIDDKGVFVAGYESLKKNEILHLKL 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED ::::::.::.:: ::::::::::::::::.::::::: :::::::::::::.:.::: :: gi|402 PLRLSVKENKGLFPERDFKVRHGGFSDRSIFDLKHVPHTRLLVTSGLPGCYLQVWQVAED 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR . :::.::::: :..:::::::::.:: . :::.::::: gi|402 S----------------------DVIKAVSTIAVHEKEESLWPRVAVFSTLAPGVLHGAR 120 130 140 150 190 200 210 220 230 240 mFLJ00 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET : .:..::.::.: ::.: ..::: :: ::::::.::::: :::::::::::::: ::. gi|402 LRSLQVVDLESRKTTYTSDVSDSEELSSLQVLDADTFAFCCASGRLGLVDTRQKWAPLEN 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP ::: ::.:::::::: . :::::: ::::::::.::::: :.:::::::.:::: ::: gi|402 RSPGPGSGGERWCAEVGSWGQGPGPSIASLGSDGRLCLLDPRDLCHPVSSVQCPVSVPSP 220 230 240 250 260 270 310 320 330 340 350 mFLJ00 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQ------AEPLFTHKGHIFLD ::::::::::::: :::::::::::::.::.::::: ..: .::::::.:::::: gi|402 DPELLRVTWAPGLKNCLAISGFDGTVQVYDATSWDGTRSQDGTRSQVEPLFTHRGHIFLD 280 290 300 310 320 330 360 370 380 390 mFLJ00 GNDVDSAPLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS :: .: ::::::::::: .:::::::..:.:::::::::: : gi|402 GNGMDPAPLVTTHTWHPCRPRTLLSATNDASLHVWDWVDLCAPR 340 350 360 370 380 >>gi|55930876|gb|AAH50648.1| WDR73 protein [Homo sapiens (386 aa) initn: 2006 init1: 1052 opt: 1365 Z-score: 1654.9 bits: 315.0 E(): 1.8e-83 Smith-Waterman score: 1935; 73.214% identity (83.929% similar) in 392 aa overlap (11-396:15-384) 10 20 30 40 50 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEIL : . . ::::.:::::::::::::: .::::::::::::::::: gi|559 RKRSLPWILGTTGWWNPCACKSYQDFYAFDLSGATRVLEWIDDKGVFVAGYESLKKNEIL 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 HLILPLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQ :: :::::::.::.:: ::::::::::::::::.::::::: :::::::::::::.:.:: gi|559 HLKLPLRLSVKENKGLFPERDFKVRHGGFSDRSIFDLKHVPHTRLLVTSGLPGCYLQVWQ 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 VREDNAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGIL : ::. :::.::::: :..:::::::::.:: . :::.: gi|559 VAEDS----------------------DVIKAVSTIAVHEKEESLWPRVAVFSTLAPGVL 130 140 150 180 190 200 210 220 230 mFLJ00 HGARLSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWA ::::: .:..::.::.: ::.: ..::: :: ::::::.::::: :::::::::::::: gi|559 HGARLRSLQVVDLESRKTTYTSDVSDSEELSSLQVLDADTFAFCCASGRLGLVDTRQKWA 160 170 180 190 200 210 240 250 260 270 280 290 mFLJ00 ALETVSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVF ::. ::: ::.:::::::: . :::::: ::::::::.::::: :.:::::::.:::: gi|559 PLENRSPGPGSGGERWCAEVGSWGQGPGPSIASLGSDGRLCLLDPRDLCHPVSSVQCPVS 220 230 240 250 260 270 300 310 320 330 340 350 mFLJ00 KPSPDPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQ------AEPLFTHKGH :::::::::::::::: :::::::::::::.::.::::: ..: .::::::.:: gi|559 VPSPDPELLRVTWAPGLKNCLAISGFDGTVQVYDATSWDGTRSQDGTRSQVEPLFTHRGH 280 290 300 310 320 330 360 370 380 390 mFLJ00 IFLDGNDVDSAPLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS :::::: .: ::::::::::: .:::::::..:.:::::::::: : gi|559 IFLDGNGMDPAPLVTTHTWHPCRPRTLLSATNDASLHVWDWVDLCAPR 340 350 360 370 380 >>gi|119622352|gb|EAX01947.1| WD repeat domain 73, isofo (404 aa) initn: 2006 init1: 1052 opt: 1365 Z-score: 1654.6 bits: 315.0 E(): 1.9e-83 Smith-Waterman score: 1935; 73.214% identity (83.929% similar) in 392 aa overlap (11-396:33-402) 10 20 30 40 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEK : . . ::::.:::::::::::::: .: gi|119 RESRAAPEGSQAEVRRRKRSLPWILGTTGWWNPCACKSYQDFYAFDLSGATRVLEWIDDK 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 GVFVAGYESLKKNEILHLILPLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTR :::::::::::::::::: :::::::.::.:: ::::::::::::::::.::::::: :: gi|119 GVFVAGYESLKKNEILHLKLPLRLSVKENKGLFPERDFKVRHGGFSDRSIFDLKHVPHTR 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 LLVTSGLPGCYIQMWQVREDNAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEES :::::::::::.:.::: ::. :::.::::: :..:::: gi|119 LLVTSGLPGCYLQVWQVAEDS----------------------DVIKAVSTIAVHEKEES 130 140 150 160 170 180 190 200 210 220 mFLJ00 LWPRVSVFCSKAPGILHGARLSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFC :::::.:: . :::.:::::: .:..::.::.: ::.: ..::: :: ::::::.::::: gi|119 LWPRVAVFSTLAPGVLHGARLRSLQVVDLESRKTTYTSDVSDSEELSSLQVLDADTFAFC 170 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 GNSGRLGLVDTRQKWAALETVSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLD :::::::::::::: ::. ::: ::.:::::::: . :::::: ::::::::.::::: gi|119 CASGRLGLVDTRQKWAPLENRSPGPGSGGERWCAEVGSWGQGPGPSIASLGSDGRLCLLD 230 240 250 260 270 280 290 300 310 320 330 340 mFLJ00 SRNLCHPVSSAQCPVFKPSPDPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQ :.:::::::.:::: :::::::::::::::: :::::::::::::.::.::::: ..: gi|119 PRDLCHPVSSVQCPVSVPSPDPELLRVTWAPGLKNCLAISGFDGTVQVYDATSWDGTRSQ 290 300 310 320 330 340 350 360 370 380 390 mFLJ00 ------AEPLFTHKGHIFLDGNDVDSAPLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDL .::::::.:::::::: .: ::::::::::: .:::::::..:.:::::::::: gi|119 DGTRSQVEPLFTHRGHIFLDGNGMDPAPLVTTHTWHPCRPRTLLSATNDASLHVWDWVDL 350 360 370 380 390 400 mFLJ00 QAS : gi|119 CAPR >>gi|114658646|ref|XP_001162099.1| PREDICTED: WD repeat (378 aa) initn: 2066 init1: 1051 opt: 1364 Z-score: 1653.8 bits: 314.8 E(): 2.1e-83 Smith-Waterman score: 1998; 74.121% identity (85.176% similar) in 398 aa overlap (5-396:1-376) 10 20 30 40 50 60 mFLJ00 ATVAMELAEDWLVESLRLYQDFHAFDLSGATRVLEWIGEKGVFVAGYESLKKNEILHLIL :. ..:::::::::::::.:::::::::::::: .::::::::::::::::::: : gi|114 MDPGDDWLVESLRLYQDFYAFDLSGATRVLEWIDDKGVFVAGYESLKKNEILHLKL 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 PLRLSVQENQGLHPERDFKVRHGGFSDRSVFDLKHVPDTRLLVTSGLPGCYIQMWQVRED ::::::.::.:: ::::::::::::::::.::::::: :::::::::::::.:.::: :: gi|114 PLRLSVKENKGLFPERDFKVRHGGFSDRSIFDLKHVPHTRLLVTSGLPGCYLQVWQVAED 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 NAEPGKKHLSQGTAQFLSTTCNQDVIEAVSTIDVQDKEESLWPRVSVFCSKAPGILHGAR . :::.::::: :..:::::::::.:: . :::.::::: gi|114 S----------------------DVIKAVSTIAVHEKEESLWPRVAVFSTLAPGVLHGAR 120 130 140 150 190 200 210 220 230 240 mFLJ00 LSGLRTVDVESQKITYSSGTADSESLSCLQVLDANTFAFCGNSGRLGLVDTRQKWAALET : .:...:.::.: ::.: ..::: :: ::::::.::::: :::::::::::::: ::. gi|114 LRSLQVIDLESRKTTYTSDVSDSEELSSLQVLDADTFAFCCASGRLGLVDTRQKWAPLEN 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 VSPGSGSSGERWCAEVRNKGQGPGPCIASLGSDGQLCLLDSRNLCHPVSSAQCPVFKPSP ::: ::.:::::::: . :::::: ::::::::.::::: :.:::::::.:::: ::: gi|114 RSPGPGSGGERWCAEVGSWGQGPGPSIASLGSDGRLCLLDPRDLCHPVSSVQCPVSVPSP 220 230 240 250 260 270 310 320 330 340 350 mFLJ00 DPELLRVTWAPGLDNCLAISGFDGTVQIYDVTSWDGKKTQ------AEPLFTHKGHIFLD ::::::::::::: :::::::::::::.::.::::: ..: .::::::.:::::: gi|114 DPELLRVTWAPGLKNCLAISGFDGTVQVYDATSWDGTRSQDGTRSQVEPLFTHRGHIFLD 280 290 300 310 320 330 360 370 380 390 mFLJ00 GNDVDSAPLVTTHTWHPRKPRTLLSAASDSSLHVWDWVDLQAS :: .: ::::::::::: .:::::::..:.:::::::::: : gi|114 GNGMDPAPLVTTHTWHPCRPRTLLSATNDASLHVWDWVDLCAPR 340 350 360 370 397 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 04:57:16 2009 done: Fri Mar 13 05:03:40 2009 Total Scan time: 874.370 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]