Comparison of KIAA cDNA sequences between mouse and human (FLJ00333)
<<Original sequence data>>
mouse mFLJ00333 (mlj02359) length: 1247 bp, CDS: 1 - 219
human (sj04245) length: 4326 bp, CDS: 715 - 2028
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 1735 - 1963 151 70 31.7
3'UTR: 1964 - 4291 515 533 50.9
amino acid
CDS: 1735 - 1963 37 40 51.9
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mlj02359 1 .................................................. 1
sj04245 1 GGCTGTAAGTATTTGGCTTTATTTCTGTGTTCTCTCCTTCCATTGGTCTA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mlj02359 1 .................................................. 1
sj04245 51 CCTGTCTGTTTTTATACCAGTACCATGCTGTTCTGGTAACTATAGCCTTG 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mlj02359 1 .................................................. 1
sj04245 101 TAGTATCGTTCAAAGTCAGGTAATGTGATGCCTCCAGATTTGTTCTTTTT 150
151 ----+----*----+----*----+----*----+----*----+----* 200
mlj02359 1 .................................................. 1
sj04245 151 GCTTAGTCTTGCTTTGGCTATGTAGGCTCTTTTTTTTGTTCCATATGAAT 200
201 ----+----*----+----*----+----*----+----*----+----* 250
mlj02359 1 .................................................. 1
sj04245 201 ATTAGGATTGTTTTTTCTAGTTCTGTGAAGAATTATGGTGGTATTTTGAT 250
251 ----+----*----+----*----+----*----+----*----+----* 300
mlj02359 1 .................................................. 1
sj04245 251 GGGAATTGCATTGAAGTTATAGATTGCTTTTGGTAGATGGCCATTTTCAC 300
301 ----+----*----+----*----+----*----+----*----+----* 350
mlj02359 1 .................................................. 1
sj04245 301 AATATTGATTCTACCCATCCATGAGAATGGGATGTGTTTCCATTTGATTG 350
351 ----+----*----+----*----+----*----+----*----+----* 400
mlj02359 1 .................................................. 1
sj04245 351 TGTCATCTGCGATTTCTTACACCAGTGTTTTGTAGTTTTTCTTATAGATA 400
401 ----+----*----+----*----+----*----+----*----+----* 450
mlj02359 1 .................................................. 1
sj04245 401 TCTTTCACTCACTTGTGAAGGTGTATTTCTAAGTATTTTATTTTTGTAGG 450
451 ----+----*----+----*----+----*----+----*----+----* 500
mlj02359 1 .................................................. 1
sj04245 451 TGTCATAAACAAGTTTGAATTTTTTATTTGATTCTCAGCTTGGTCACTAT 500
501 ----+----*----+----*----+----*----+----*----+----* 550
mlj02359 1 .................................................. 1
sj04245 501 TGGTGTATAGCAGTGTTACTGATTTGTGTACATTGATTTTGTATCCTGAA 550
551 ----+----*----+----*----+----*----+----*----+----* 600
mlj02359 1 .................................................. 1
sj04245 551 ACTTTACTGAACTCATTTATCAGATCTAGGAGCTTTTTGGATGAGTCTTT 600
601 ----+----*----+----*----+----*----+----*----+----* 650
mlj02359 1 .................................................. 1
sj04245 601 AGGGTTTCCTAGGTATACAATCATGTCATCAGTGAACAGCAACAATTTGA 650
651 ----+----*----+----*----+----*----+----*----+----* 700
mlj02359 1 .................................................. 1
sj04245 651 CTTCTTCCTCTTTACCAATTTGGATGTCCTTTATTTCTTTCTCTTGTCTG 700
701 ----+----*----+----*----+----*----+----*----+----* 750
mlj02359 1 .................................................. 1
sj04245 701 ATTGTTCTGGCTAGGACAAAGAGCTGTTTCTAATTTTAAAAATACATGTG 750
D K E L F L I L K I H V
751 ----+----*----+----*----+----*----+----*----+----* 800
mlj02359 1 .................................................. 1
sj04245 751 TCCCTAACTCATTTTCTCTCTCAGTTCCAGTGTCTCGCCCCATCCTCACC 800
S L T H F L S Q F Q C L A P S S P
801 ----+----*----+----*----+----*----+----*----+----* 850
mlj02359 1 .................................................. 1
sj04245 801 CTCAGGGTTCCCAGGGGCCCAGGCTGTGGTGGGGGACCTGCTGGAGCTTC 850
S G F P G A Q A V V G D L L E L H
851 ----+----*----+----*----+----*----+----*----+----* 900
mlj02359 1 .................................................. 1
sj04245 851 ACTGTGAGGCCCCGAGAGGCTCTCCCCCAATCCTGTACTGGTTTTATCAT 900
C E A P R G S P P I L Y W F Y H
901 ----+----*----+----*----+----*----+----*----+----* 950
mlj02359 1 .................................................. 1
sj04245 901 GAGGATGTCACCCTGGGGAGCAGCTCAGCCCCCTCTGGAGGAGAAGCTTC 950
E D V T L G S S S A P S G G E A S
951 ----+----*----+----*----+----*----+----*----+----* 1000
mlj02359 1 .................................................. 1
sj04245 951 TTTCAACCTCTCTCTGACTGCAGAACATTCTGGAAACTACTCATGTGAGG 1000
F N L S L T A E H S G N Y S C E A
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mlj02359 1 .................................................. 1
sj04245 1001 CCAACAATGGCCTAGTGGCCCAGCACAGTGACACAATATCACTCAGTGTT 1050
N N G L V A Q H S D T I S L S V
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mlj02359 1 .................................................. 1
sj04245 1051 ATAGTTCCAGTATCTCGTCCCATCCTCACCTTCAGGGCTCCCAGGGCCCA 1100
I V P V S R P I L T F R A P R A Q
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mlj02359 1 .................................................. 1
sj04245 1101 GGCTGTGGTGGGGGACCTGCTGGAGCTTCACTGTGAGGCCCTGAGAGGCT 1150
A V V G D L L E L H C E A L R G S
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mlj02359 1 .................................................. 1
sj04245 1151 CCTCCCCAATCCTGTACTGGTTTTATCATGAAGATGTCACCCTGGGTAAG 1200
S P I L Y W F Y H E D V T L G K
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mlj02359 1 .................................................. 1
sj04245 1201 ATCTCAGCCCCCTCTGGAGGAGGGGCCTCCTTCAACCTCTCTCTGACTAC 1250
I S A P S G G G A S F N L S L T T
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mlj02359 1 .................................................. 1
sj04245 1251 AGAACATTCTGGAATCTACTCCTGTGAGGCAGACAATGGTCTGGAGGCCC 1300
E H S G I Y S C E A D N G L E A Q
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mlj02359 1 .................................................. 1
sj04245 1301 AGCGCAGTGAGATGGTGACACTGAAAGTTGCAGTTCCGGTGTCTCGCCCG 1350
R S E M V T L K V A V P V S R P
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mlj02359 1 .................................................. 1
sj04245 1351 GTCCTCACCCTCAGGGCTCCCGGGACCCATGCTGCGGTGGGGGACCTGCT 1400
V L T L R A P G T H A A V G D L L
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mlj02359 1 .................................................. 1
sj04245 1401 GGAGCTTCACTGTGAGGCCCTGAGAGGCTCTCCCCTGATCCTGTACCGGT 1450
E L H C E A L R G S P L I L Y R F
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mlj02359 1 .................................................. 1
sj04245 1451 TTTTTCATGAGGATGTCACCCTAGGAAATAGGTCGTCCCCCTCTGGAGGA 1500
F H E D V T L G N R S S P S G G
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mlj02359 1 .................................................. 1
sj04245 1501 GCGTCCTTAAACCTCTCTCTGACTGCAGAGCACTCTGGAAACTACTCCTG 1550
A S L N L S L T A E H S G N Y S C
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mlj02359 1 .................................................. 1
sj04245 1551 TGAGGCCGACAATGGCCTCGGGGCCCAGCGCAGTGAGACAGTGACACTTT 1600
E A D N G L G A Q R S E T V T L Y
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mlj02359 1 .................................................. 1
sj04245 1601 ATATCACAGGGCTGACCGCGAACAGAAGTGGCCCTTTTGCCACAGGAGTC 1650
I T G L T A N R S G P F A T G V
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mlj02359 1 .................................................. 1
sj04245 1651 GCCGGGGGCCTGCTCAGCATAGCAGGCCTTGCTGCGGGGGCACTGCTGCT 1700
A G G L L S I A G L A A G A L L L
1701 ----+----*----+----*----+----*----+----*----+----* 1750
P T S D D S
mlj02359 1 ..................................CCTACCTCTGATGACT 16
||| ||||||| |
sj04245 1701 CTACTGCTGGCTCTCGAGAAAAGCAGGGAGAAAGCCTGCCTCTGACCCCG 1750
Y C W L S R K A G R K P A S D P A
1751 ----+----*----+----*----+----*----+----*----+----* 1800
R N P S D S E P Q E P T Y Y N V
mlj02359 17 CCAGGAACCCTTCAGATTCAGAACCCCAGGAGCCCACCTATTACAACGTA 66
|||||| ||||||||| || || |||| |||||||||||| |||| |||
sj04245 1751 CCAGGAGCCCTTCAGACTCGGACTCCCAAGAGCCCACCTATCACAATGTA 1800
R S P S D S D S Q E P T Y H N V
1801 ----+----*----+----*----+----*----+----*----+----* 1850
P A C I E L Q P V Y S N E P E
mlj02359 67 CCAGCCTGTATAGAACTGCAGCCAGTGTACAGCAATGAGCCT......GA 110
|||||||| ||| ||||| |||||||||| |||| | |
sj04245 1801 CCAGCCTGGGAAGAGCTGCAACCAGTGTACACTAATGCAAATCCTAGAGG 1850
P A W E E L Q P V Y T N A N P R G
1851 ----+----*----+----*----+----*----+----*----+----* 1900
E N V I Y T E V R R T Q P R Q K H
mlj02359 111 GGAAAACGTGATTTACACAGAAGTACGGAGAACTCAACCAAGACAGAAAC 160
||||| ||| ||||| |||||||||||| | ||| | | ||||||
sj04245 1851 AGAAAATGTGGTTTACTCAGAAGTACGGATCATCCAAGAGAAAAAGAAAC 1900
E N V V Y S E V R I I Q E K K K H
1901 ----+----*----+----*----+----*----+----*----+----* 1950
A - S G V * K P K I K V P D G
mlj02359 161 ATGCAG....ATCAGGAGTCTGAAAGCCCAAGATCAAGGTGCCAGATGGC 206
|||||| || | | | | | || || ||||| | | |
sj04245 1901 ATGCAGTGGCCTCTGACCCCAGGCATCTCAGGAACAAGGGTTCCCCTATC 1950
A V A S D P R H L R N K G S P I
1951 ----+----*----+----*----+----*----+----*----+----* 2000
* E K V G Y V S S K I P K N R M C
mlj02359 207 TGAGAAAAAGTAGGATATGTCTCCTCCAAGATTCCCAAGAATAGAATGTG 256
| | || | || | || | |||
sj04245 1951 ATCTACTCTGAAGTTAAGGTGGCGTCAACCCCGGTTTCCGGATCCCTGTT 2000
I Y S E V K V A S T P V S G S L F
2001 ----+----*----+----*----+----*----+----*----+----* 2050
L T P T V P Y R S
mlj02359 257 CCTGACTCCCACAGTACCCTATAGATCTGGCCAATCATCTC........A 298
| || || || ||| || | |||| | ||| | ||||
sj04245 2001 CTTGGCTTCCTCAGCTCCTCACAGATGAGTCCACACGTCTCTCCAACTGC 2050
L A S S A P H R *
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mlj02359 299 GTTTTCAGTGGAGCCATGGAAATGCTCCC..................... 327
|||||| || || | ||||
sj04245 2051 TGTTTCAGCCTCTGCACCCCAAAGTTCCCCTTGGGGGAGAAGCAGCATTG 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mlj02359 328 ...................................AATACCCTCCATCTC 342
| | ||| | ||
sj04245 2101 AAGTGGGAAGATTTAGGCTGCCCCAGACCATATCTACTGGCCTTTGTTTC 2150
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mlj02359 343 TTAGAAGAACAATCTCAGGTT............................. 363
| || |||||| |
sj04245 2151 ACATGTCCTCATTCTCAGTCTGACCAGAATGCAGGGCCCTGCTGGACTGT 2200
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mlj02359 364 .................................................. 364
sj04245 2201 CACCTGTTTCCCAGTTAAAGCCCTGACTGGCAGGTTTTTTAATCCAGTGG 2250
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mlj02359 364 .................................................. 364
sj04245 2251 CAAGGTGCTCCCACTCCAGGGCCCAGCACATCTCCTGGATTCCTTAGTGG 2300
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mlj02359 364 .................................................. 364
sj04245 2301 GCTTCAGCTGTGGTTGCTGTTCTGAGTACTGCTCTCATCACACCCCCACA 2350
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mlj02359 364 .................................................. 364
sj04245 2351 GAGGGGGTCTTACCACACAAAGGGAGAGTGGGCCTTCAGGAGATGCCGGG 2400
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mlj02359 364 .................................................. 364
sj04245 2401 CTGGCCTAACAGCTCAGGTGCTCCTAAACTCCGACACAGAGTTCCTGCTT 2450
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mlj02359 364 .................................................. 364
sj04245 2451 TGGGTGGATGCATTTCTCAATTGTCATCAGCCTGGTGGGGCTACTGCAGT 2500
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mlj02359 364 ................................................CC 365
sj04245 2501 GTGCTGCCAAATGGGACAGCACACAGCCTGTGCACATGGGACATGTGATG 2550
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mlj02359 366 AATCTCGTCCCCGGTGCTTCAGATCCAAACCTCCAAAATTTCACATTATT 415
|||| | | || ||| || || | | | | | || || |
sj04245 2551 GGTCTCCCCACGGGGGCTGCATTTCACACTCCTCCACCTGTCTCAAACTC 2600
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mlj02359 416 TA................................................ 417
||
sj04245 2601 TAAGGTCGGCACTTGACACCAAGGTAACTTCTCTCCTGCTCATGTGTCAG 2650
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mlj02359 418 .........................GTAACAGATTTGGTGGCACGCTCCT 442
| | | | || || | || |
sj04245 2651 TGTCTACCTGCCCAAGTAAGTGGCTTTCATACACCAAGTCCCAAGTTCTT 2700
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mlj02359 443 GACAAACTCAAGTCAAGAACCCCCGAGGAAAATGGCA.GACTAGAAGACG 491
|| || | | ||||| | | || | || || | || |
sj04245 2701 CCCATCCTAACAGAAGTAACCCAGCAAGTCAAGGCCAGGAGGACCAGGGG 2750
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mlj02359 492 TTTCTACGCCACCCTT..TGAATGAGAAGAGCCACAATAAGAAAAATAGA 539
| || || | | || | | | ||| | | | | | ||
sj04245 2751 TGCAGACAGAACACATACTGGAACACAGGAGGTGCTCAATTACTATTTGA 2800
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mlj02359 540 C...............ACTTCTGAA.GAGAAAGAAAGAAGAAACGTTTTA 573
| | |||| ||| |||||| | | |
sj04245 2801 CTGACTGACTGAATGAATGAATGAATGAGGAAGAAAACTGTGGGTAATCA 2850
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mlj02359 574 AAATGCACCAAAATAGTGTTAAAATACCTGGAAAGTGGGGAGGAAAGACA 623
|| || ||||| || | | ||||| |||||| |
sj04245 2851 AACTGGCATAAAATCCAGTGCACTCCCTAGGAAATCCGGGAGGTATTCTG 2900
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mlj02359 624 GGTAACGCATGAGAAACAGCCAACGTA..AACACAGACCAGCAGCATGGC 671
| | | | || | | | | | | | | || || | ||
sj04245 2901 GCTTCCCTAAGAAACAATGGAAGAGAAGGAGCTTGGATGAGGAAACTGTT 2950
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mlj02359 672 TGTGATGTGGACAGGGTGAACAGACTTCTCATAAGCTAAAGGA....... 714
| | ||| || | || |||| |||| ||| |||
sj04245 2951 CAGCAAGAGGAAGGGCTTCTCACACTT.TCATGTGCTTGTGGATCACCTG 2999
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mlj02359 715 .................................................. 715
sj04245 3000 AGGATCCTGTGAAAATACAGATACTGATTCAGTGGGTCTGCGTAGAGCCT 3049
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mlj02359 715 .................................................. 715
sj04245 3050 GAGACTGCCATTCTAACATGTTCCCAGGGGATGCTGATGCTGCTGGCCCT 3099
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mlj02359 715 .................................................. 715
sj04245 3100 GGGACTGGACTGCATGCATGTGAAGCCCTATAGGTCTCAGCAGAGGCCCA 3149
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mlj02359 715 .................................................. 715
sj04245 3150 TGGAGAGGGAATGTGTGGTCTGGCTGCCCAGGGGCCCAACTCGGTTCACA 3199
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mlj02359 715 .................................................. 715
sj04245 3200 CGGATCGTGCTGCTCCCTGGCCAGCCTTTGGCCACAGCACCACCAGCTGC 3249
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mlj02359 715 ............................................AGCTGC 720
||| |
sj04245 3250 TGTTGCTGAGAGAGCTTCTTCTCTGTGACATGTTGGCTTTCATCAGCCAC 3299
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mlj02359 721 CCTGGTGAGAGAAAACTGGCCG..............TCCTGCCCTCAGAG 756
||||| || | ||| | || | ||| ||||||
sj04245 3300 CCTGGGAAGCGGAAAGTAGCTGCCACTATCTTTGTTTCCCCACCTCAGGC 3349
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mlj02359 757 CAAGTCCTCAGCCCTCACAAGCCTGAA....................... 783
| || || | | ||| ||||
sj04245 3350 CTCACACTTTCCCATGAAAAGGGTGAATGTATATAACCTGAGCCCTCTCC 3399
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mlj02359 784 ........................AACCAGTGGCAGCTTTTGT....... 802
| || ||| | || |||
sj04245 3400 ATTCAGAGTTGTTCTCCCATCTCTGAGCAATGGGATGTTCTGTTCCGCTT 3449
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mlj02359 803 .................................................. 803
sj04245 3450 TTATGATATCCATCACATCTTATCTTGATCTTTGCTCCCAGTGGATTGTA 3499
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mlj02359 803 ...............................GAGACAACCATTCCTCCGG 821
| | || | |||| ||
sj04245 3500 CAGTGATGACTTTTAAGCCCCACGGCCCTGAAATAAAATCCTTCCAAGGG 3549
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mlj02359 822 CACTGAAAGAGGAAGCACACCCAGC...AGCTGCGTGCGCCTCAGAGCGG 868
|| || ||| | | | | | ||| || || || |
sj04245 3550 CATTGGAAGCTCACTCCACCTGAACCATGGCTTTTCATGCTTCCAAGTGT 3599
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mlj02359 869 AAGTGACCCGGTTTGAATGAGAAGG......................... 893
|| | | | || || | ||
sj04245 3600 CAGGGCCTTGCCCAGATAGACAGGGCTGGCTCTGCTGCCCCAACCTTTCA 3649
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mlj02359 894 ................TCTCCCACAGGCATGTGGATTTGAACTCTTGGAC 927
|| ||||| || || | || |
sj04245 3650 AGGAGGAAACCAGACACCTGAGACAGGAGCCTGTATGCAGCCCAGTGCAG 3699
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mlj02359 928 CCCAGATGCTAGCACATTTGGAGAGGTTATAGAACCGCTAAGGTATGGAA 977
|| | | || ||||| || | | || |||| ||
sj04245 3700 CCTTGCAGAGGACAAGGCTGGAGGCATTTGTCATCACTACAGATATGCAA 3749
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mlj02359 978 C.......................CTTGCTGGAGAAAGCGTGCCCCTGGA 1004
| ||| || | | | |
sj04245 3750 CTAAAATAGACGTGGAGCAAGAGAAATGCATTCCCAACGGGGGCGGTTTT 3799
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mlj02359 1005 GATAGGCTTCGTTAAGAGTGTA....GCCTGCTTCTAGTTTACCCTCAG. 1049
||||| | ||| | ||| | | | || | || || |||||
sj04245 3800 TTTAGGCCTAGTTGAAAGTCAAGAAGGACAGCAGCAAGCATAGGCTCAGG 3849
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mlj02359 1050 ........................CTTTCTGTTTGAGGTTGAGGATTCAA 1075
| | | | ||||| |||
sj04245 3850 ATTAAAGAAAAAAATCTGCTCACAGTCTGTTCTGGAGGTCACATCACCAA 3899
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mlj02359 1076 TCACCCCCGCTTCCTGTTCTGGCCCCTCAGCCTGCGGTGGACTCTGCCTT 1125
| | | | ||| | | | || || | || || | | ||
sj04245 3900 CAAAGCTCACGCCCTATGCAG..TTCTGAGAAGGTGGAGGCACCAGGCTC 3947
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mlj02359 1126 TGGAACCAGAAGCCAGAAT............................... 1144
| || |||||
sj04245 3948 AAAAGAGGAAATTTAGAATTTCTCATTGGGAGAGTAAGGTACCCCCATCC 3997
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mlj02359 1145 .................................................. 1145
sj04245 3998 CAGAATGATAACTGCACAGTGGCAGAACAAACTCCACCCTAATGTGGGTG 4047
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mlj02359 1145 .......................................CGGCATGTTGT 1155
||| | || |
sj04245 4048 GACCCCGTCCAGTCTGTTGAAGGCCTGAATGTAACAAAAGGGCTTATTCT 4097
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mlj02359 1156 TCCTAA.....................GTGGCTGCTGACTGGCCATGCCA 1184
|||| | ||||| | | |
sj04245 4098 TCCTCAAGTAAGGGGGAACTCCTGCTTTGGGCTGGGACATAAGTTTTTCT 4147
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mlj02359 1185 TTTTCCTCACAGCAACAGAAAAATGTCTGATC.................. 1216
|| | || ||| |||||||| || ||
sj04245 4148 GCTTTCAGACGCAAACTGAAAAATGGCTCTTCTTGGGTCTTGAGCTTGCT 4197
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mlj02359 1217 .................................................. 1217
sj04245 4198 GGCATATGGACTGAAAGAAACTATGCTATTGGATCTCCTGGATCTCCAGC 4247
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mlj02359 1217 ..........CAGACGTTGGTACAAAAGAGTGGGTACGGAC......... 1247
||| ||| | | || ||| | |
sj04245 4248 TTGCTGACTGGAGATCTTGAGATATGTCAGCCTCTACAGTCACAAGAGCT 4297
4301 ----+----*----+----*----+---- 4329
mlj02359 1248 ............................. 1248
sj04245 4298 AATTCATTCTAATAAACCAATCTTTCTGT 4326