Comparison of KIAA cDNA sequences between mouse and human (KIAA0117)
<<Original sequence data>>
mouse mKIAA0117 (mif32059) length: 583 bp, CDS: 2 - 370
human KIAA0117 (ha01845) length: 881 bp, CDS: 1 - 684
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 61 - 63 3 0 0.0
CDS: 64 - 559 178 184 50.8
3'UTR: 560 - 837 102 115 53.0
amino acid
CDS: 64 - 559 23 139 85.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mif32059 1 .................................................. 1
ha01845 1 GTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGT 50
V R M A L E G M S K R K R K R S V
51 ----+----*----+----*----+----*----+----*----+----* 100
E D R E K P T Y R S R -
mif32059 1 ..........GAGGATCGTGAGAAACCCACTTACAGGAGTCGGC...... 34
||| ||| ||| | | | | |||||| ||
ha01845 51 CCAGGAGGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAG 100
Q E G E N P D D G V R G S P P E D
101 ----+----*----+----*----+----*----+----*----+----* 150
R G F G Y V L F
mif32059 35 ..........................AGAGGATTTGGCTATGTGCTCTTT 58
|| |||| || | | | |
ha01845 101 ACTACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCAT 150
Y R L G Q V A S S L F R G E H H
151 ----+----*----+----*----+----*----+----*----+----* 200
E N T D A V H L A L K L N N S E H
mif32059 59 GAGAACACAGATGCTGTTCATCTTGCTTTGAAGTTAAATAATTCTGAGCT 108
| | | | || || || | || | | | ||||
ha01845 151 TCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGC. 199
S R G G T G R L A S L F S S L E P
201 ----+----*----+----*----+----*----+----*----+----* 250
G K K T E S H A F C * * R K T K
mif32059 109 AATGGGAAGAAAACTGAGAGTCATGCGTTCTGTTAATAAAGAAAAACTAA 158
|| || | | | | | | || ||| | | ||
ha01845 200 .CCCAGATTCAACCCGTGTACGTGCCTGTGCCTAAACAAACCATCAAAAA 248
Q I Q P V Y V P V P K Q T I K K
251 ----+----*----+----*----+----*----+----*----+----* 300
T - Q N S N P S
mif32059 159 AACAA.............................CAGAATTCAAATCCAA 179
||| | |||| | || |||
ha01845 249 AACGAAACGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCAC 298
T K R N E E E E S T S Q I E R P L
301 ----+----*----+----*----+----*----+----*----+----* 350
L K K D V I K P K Q R L N F T S
mif32059 180 GCTTGAAGAAGGATGTCATTAAACCTAAGCAAAGACTTAATTTTACTTCC 229
| | | | || || ||| || | || ||| |
ha01845 299 TTTCGCAAGAACCTGCCAAAAAAGTGAAAGCGAAGAAGAAACACACTAAC 348
S Q E P A K K V K A K K K H T N
351 ----+----*----+----*----+----*----+----*----+----* 400
K E G K F P K K E N S I P R M H
mif32059 230 AAAGAAGGAAAATTCCATTCCAAAGAAGGAAAATTCCATTCCAAGAATGC 279
|||| ||| | | || | | ||||| | | | ||
ha01845 349 GCAGAAAAAAAGT....TGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTG 394
A E K K L A D R E S A L A S A D
401 ----+----*----+----*----+----*----+----*----+----* 450
L E K A V L M K K K K K G Q -
mif32059 280 ATTTATTGGAGAAAAGGCAGTTCTCATGAAAAAGAAAAAGAAAGGACAAA 329
|||| |||| | | | ||| | |||| | ||||| | |||
ha01845 395 ATTT.....AGAAGAAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAA 439
L E E E I H Q K Q G Q K R K N
451 ----+----*----+----*----+----*----+----*----+----* 500
mif32059 330 A................................................. 330
|
ha01845 440 ATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACA 489
S Q P G V K V A D R K I L D D T
501 ----+----*----+----*----+----*----+----*----+----* 550
K K Y K * R N Q E N
mif32059 331 ...................GAAAAAAGTACAAATGAAGAAACCAAGAAAA 361
|| |||| | | || ||||||||| |
ha01845 490 GAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGA 539
E D T V V S Q R K K I Q I N Q E E
551 ----+----*----+----*----+----*----+----*----+----* 600
S S N N * G C L L S V V - L A
mif32059 362 CAGCAGTAATAACTGAGGTTGCCTCCTTTCTGTGGTGAA.....ACCTTG 406
|| || | | | | ||| | ||| ||
ha01845 540 AGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTA 589
E R L K N E R T V F V G N L P V T
601 ----+----*----+----*----+----*----+----*----+----* 650
M S V W V F Y G L C R K C G G I
mif32059 407 CAATGAGTGTCTGGGTTTTTTATGGATTATGTAGAAAATGTGGAGGCATC 456
|| | | | | | || | || | | | |||| ||
ha01845 590 CATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATA 639
C N K K K L K S F F K E Y G Q I
651 ----+----*----+----*----+----*----+----*----+----* 700
H G V W F L F L F F -
mif32059 457 CACGGTGTCTGGTTTTTGTTTTTGTTTTTTTT.................. 488
| ||| | ||| | | || | | |||
ha01845 640 GAATCTGTACGATTTCGTTCTCTGGTATGTTTCATTCCCCCGTAAAATTA 689
E S V R F R S L V C F I P P *
701 ----+----*----+----*----+----*----+----*----+----* 750
mif32059 489 .................................TTTAATTCATGCTATAT 505
| | || |||| |
ha01845 690 CATAATATTAAAATTTATTGCATTTAAATCAGATGAACTTATTGCTGTTA 739
751 ----+----*----+----*----+----*----+----*----+----* 800
mif32059 506 GTAAG.....GCTTCTTTGAAGCCTTGTTCTTAGAAATGT....ATTTAA 546
|| || | | | | |||| | | | | || ||||||
ha01845 740 GTGAGATGGTGAAGCACTTTAACCTTTTGAATCAATAGGTTCAAATTTAA 789
801 ----+----*----+----*----+----*----+----*----+----* 850
mif32059 547 AGAAAAATAATAAACATTAATACTCTGTGTTTAGGAT............. 583
|| | || | | |||| | | | ||
ha01845 790 CCCAAGAAAAGAGTTGCTCTTACTATCTACTGCTGACTCTTGAACTTTTT 839
851 ----+----*----+----*----+----*----+----*-- 892
mif32059 584 .......................................... 584
ha01845 840 AAATAATGTATTGAGTTTACTTAATAAAATGATACTCTTGCT 881