# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mif03013.fasta.nr -Q ../query/mFLJ00306.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00306, 118 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7897204 sequences Expectation_n fit: rho(ln(x))= 4.6856+/-0.000182; mu= 8.3582+/- 0.010 mean_var=68.2520+/-13.190, 0's: 41 Z-trim: 181 B-trim: 0 in 0/67 Lambda= 0.155245 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148675089|gb|EDL07036.1| zinc finger protein 71 ( 665) 847 198.1 1.4e-48 gi|26350893|dbj|BAC39083.1| unnamed protein produc ( 665) 847 198.1 1.4e-48 gi|149057281|gb|EDM08604.1| zinc finger protein 71 ( 664) 811 190.0 3.8e-46 gi|149057283|gb|EDM08606.1| zinc finger protein 71 ( 687) 811 190.1 3.9e-46 gi|74191888|dbj|BAE32892.1| unnamed protein produc ( 645) 482 116.3 5.7e-24 gi|73951205|ref|XP_859927.1| PREDICTED: hypothetic ( 440) 467 112.8 4.5e-23 gi|73951203|ref|XP_545858.2| PREDICTED: hypothetic ( 664) 467 113.0 6e-23 gi|119927277|ref|XP_587728.3| PREDICTED: similar t ( 673) 465 112.6 8.3e-23 gi|26331632|dbj|BAC29546.1| unnamed protein produc ( 285) 457 110.4 1.5e-22 gi|21732300|emb|CAD38540.1| hypothetical protein [ ( 205) 454 109.6 1.9e-22 gi|26354528|dbj|BAC40892.1| unnamed protein produc ( 482) 457 110.6 2.2e-22 gi|47077671|dbj|BAD18716.1| FLJ00306 protein [Homo ( 278) 454 109.7 2.4e-22 gi|38614322|gb|AAH60641.1| Zinc finger protein 710 ( 611) 457 110.7 2.7e-22 gi|109458961|ref|XP_214980.4| PREDICTED: similar t ( 665) 457 110.8 2.8e-22 gi|74192026|dbj|BAE32948.1| unnamed protein produc ( 666) 457 110.8 2.8e-22 gi|94730693|sp|Q3U288.1|ZN710_MOUSE RecName: Full= ( 666) 457 110.8 2.8e-22 gi|149057282|gb|EDM08605.1| zinc finger protein 71 ( 688) 457 110.8 2.9e-22 gi|194206283|ref|XP_001498967.2| PREDICTED: simila ( 687) 456 110.5 3.4e-22 gi|194039660|ref|XP_001928216.1| PREDICTED: simila ( 660) 454 110.1 4.5e-22 gi|114658856|ref|XP_510588.2| PREDICTED: zinc fing ( 664) 454 110.1 4.5e-22 gi|94730692|sp|Q8N1W2.2|ZN710_HUMAN RecName: Full= ( 664) 454 110.1 4.5e-22 gi|109082344|ref|XP_001095030.1| PREDICTED: simila ( 666) 454 110.1 4.5e-22 gi|119622485|gb|EAX02080.1| hCG2038207 [Homo sapie ( 676) 454 110.1 4.6e-22 gi|119622484|gb|EAX02079.1| hCG2041381 [Homo sapie ( 685) 454 110.1 4.6e-22 gi|194039668|ref|XP_001926416.1| PREDICTED: simila ( 771) 454 110.1 5e-22 gi|21753823|dbj|BAC04404.1| unnamed protein produc ( 664) 449 109.0 9.8e-22 gi|223648678|gb|ACN11097.1| Zinc finger protein 71 ( 668) 432 105.2 1.4e-20 gi|32493355|gb|AAH54704.1| Zgc:66441 [Danio rerio] ( 700) 423 103.2 5.8e-20 gi|47200425|emb|CAF89285.1| unnamed protein produc ( 155) 415 100.8 6.7e-20 gi|189521462|ref|XP_001922719.1| PREDICTED: simila ( 707) 421 102.7 7.9e-20 gi|47193451|emb|CAF90823.1| unnamed protein produc ( 128) 399 97.1 7e-19 gi|47217870|emb|CAG02363.1| unnamed protein produc ( 739) 396 97.1 4e-18 gi|194220149|ref|XP_001918384.1| PREDICTED: zinc f ( 730) 382 94.0 3.5e-17 gi|73950181|ref|XP_544370.2| PREDICTED: similar to ( 672) 375 92.4 9.7e-17 gi|61815397|ref|XP_588485.1| PREDICTED: similar to ( 742) 375 92.4 1e-16 gi|114599740|ref|XP_526899.2| PREDICTED: hypotheti ( 744) 375 92.4 1e-16 gi|28380235|sp|Q8N895.1|ZN366_HUMAN RecName: Full= ( 744) 375 92.4 1e-16 gi|111306532|gb|AAI21055.1| Zinc finger protein 36 ( 744) 375 92.4 1e-16 gi|149059157|gb|EDM10164.1| rCG44754 [Rattus norve ( 413) 371 91.3 1.3e-16 gi|189522121|ref|XP_698186.3| PREDICTED: similar t ( 559) 372 91.6 1.3e-16 gi|22902086|gb|AAC60294.2| fZF1 [Takifugu rubripes ( 717) 371 91.5 1.9e-16 gi|148668517|gb|EDL00836.1| zinc finger protein 36 ( 727) 371 91.5 1.9e-16 gi|224091347|ref|XP_002194931.1| PREDICTED: simila ( 732) 371 91.5 1.9e-16 gi|47125530|gb|AAH70399.1| Zinc finger protein 366 ( 746) 371 91.5 1.9e-16 gi|118103951|ref|XP_429153.2| PREDICTED: similar t ( 761) 371 91.5 2e-16 gi|149408539|ref|XP_001512748.1| PREDICTED: simila ( 704) 365 90.2 4.7e-16 gi|210124346|gb|EEA72043.1| hypothetical protein B ( 325) 291 73.3 2.6e-11 gi|210124340|gb|EEA72037.1| hypothetical protein B ( 334) 291 73.3 2.7e-11 gi|189528529|ref|XP_001921835.1| PREDICTED: hypoth ( 400) 234 60.6 2.1e-07 gi|215493311|gb|EEC02952.1| zinc finger protein, p ( 659) 235 61.0 2.6e-07 >>gi|148675089|gb|EDL07036.1| zinc finger protein 710, i (665 aa) initn: 847 init1: 847 opt: 847 Z-score: 1028.3 bits: 198.1 E(): 1.4e-48 Smith-Waterman score: 847; 100.000% identity (100.000% similar) in 118 aa overlap (1-118:548-665) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|148 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 520 530 540 550 560 570 40 50 60 70 80 90 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSSMAHSGVSSPIRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSSMAHSGVSSPIRG 580 590 600 610 620 630 100 110 mFLJ00 VGGLAKAETSMRWAQVWREGEPGEPLWQ :::::::::::::::::::::::::::: gi|148 VGGLAKAETSMRWAQVWREGEPGEPLWQ 640 650 660 >>gi|26350893|dbj|BAC39083.1| unnamed protein product [M (665 aa) initn: 847 init1: 847 opt: 847 Z-score: 1028.3 bits: 198.1 E(): 1.4e-48 Smith-Waterman score: 847; 100.000% identity (100.000% similar) in 118 aa overlap (1-118:548-665) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|263 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 520 530 540 550 560 570 40 50 60 70 80 90 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSSMAHSGVSSPIRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSSMAHSGVSSPIRG 580 590 600 610 620 630 100 110 mFLJ00 VGGLAKAETSMRWAQVWREGEPGEPLWQ :::::::::::::::::::::::::::: gi|263 VGGLAKAETSMRWAQVWREGEPGEPLWQ 640 650 660 >>gi|149057281|gb|EDM08604.1| zinc finger protein 710 (p (664 aa) initn: 811 init1: 811 opt: 811 Z-score: 984.7 bits: 190.0 E(): 3.8e-46 Smith-Waterman score: 811; 94.915% identity (97.458% similar) in 118 aa overlap (1-118:547-664) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|149 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 520 530 540 550 560 570 40 50 60 70 80 90 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSSMAHSGVSSPIRG :::::::::::::::::::::::::::::::::::::::::::::::.:.::::: :::: gi|149 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSGMVHSGVSCPIRG 580 590 600 610 620 630 100 110 mFLJ00 VGGLAKAETSMRWAQVWREGEPGEPLWQ .: :::::::::::::::::::::: :: gi|149 IGRLAKAETSMRWAQVWREGEPGEPSWQ 640 650 660 >>gi|149057283|gb|EDM08606.1| zinc finger protein 710 (p (687 aa) initn: 811 init1: 811 opt: 811 Z-score: 984.5 bits: 190.1 E(): 3.9e-46 Smith-Waterman score: 811; 94.915% identity (97.458% similar) in 118 aa overlap (1-118:570-687) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|149 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 540 550 560 570 580 590 40 50 60 70 80 90 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSSMAHSGVSSPIRG :::::::::::::::::::::::::::::::::::::::::::::::.:.::::: :::: gi|149 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSGMVHSGVSCPIRG 600 610 620 630 640 650 100 110 mFLJ00 VGGLAKAETSMRWAQVWREGEPGEPLWQ .: :::::::::::::::::::::: :: gi|149 IGRLAKAETSMRWAQVWREGEPGEPSWQ 660 670 680 >>gi|74191888|dbj|BAE32892.1| unnamed protein product [M (645 aa) initn: 657 init1: 465 opt: 482 Z-score: 586.6 bits: 116.3 E(): 5.7e-24 Smith-Waterman score: 482; 77.419% identity (88.172% similar) in 93 aa overlap (1-90:548-640) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|741 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 520 530 540 550 560 570 40 50 60 70 80 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQG--GWAVRS-GQSRIDSSMAHSGVSSP :::::::::::::::::::::::::::::::::: . :.:. : : .:: ..:.. gi|741 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGMLSTAARAAGCSYASSSSTQSAILCG 580 590 600 610 620 630 90 100 110 mFLJ00 IRGVGGLAKAETSMRWAQVWREGEPGEPLWQ ..: gi|741 VQGQPETP 640 >>gi|73951205|ref|XP_859927.1| PREDICTED: hypothetical p (440 aa) initn: 647 init1: 452 opt: 467 Z-score: 570.6 bits: 112.8 E(): 4.5e-23 Smith-Waterman score: 467; 64.865% identity (77.477% similar) in 111 aa overlap (1-109:323-433) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|739 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 300 310 320 330 340 350 40 50 60 70 80 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQ--SRIDSSMAHSGVSSPI ::::::::::::::::::::::::::::.:::: .: :..::.. . gi|739 KCPYCSSKFNLKGNLSRHMKVKHGVMDIGLDSQDPMMELTGTDPSELDSQQEIEDFENAY 360 370 380 390 400 410 90 100 110 mFLJ00 RGVGGLAKAETSMRWAQVWREGEPGEPLWQ .: ..::.:. :. .: gi|739 AYAGVDSSAEASVLTEQAMKEMAYYNVL 420 430 440 >>gi|73951203|ref|XP_545858.2| PREDICTED: hypothetical p (664 aa) initn: 657 init1: 452 opt: 467 Z-score: 568.3 bits: 113.0 E(): 6e-23 Smith-Waterman score: 467; 64.865% identity (77.477% similar) in 111 aa overlap (1-109:547-657) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|739 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 520 530 540 550 560 570 40 50 60 70 80 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQ--SRIDSSMAHSGVSSPI ::::::::::::::::::::::::::::.:::: .: :..::.. . gi|739 KCPYCSSKFNLKGNLSRHMKVKHGVMDIGLDSQDPMMELTGTDPSELDSQQEIEDFENAY 580 590 600 610 620 630 90 100 110 mFLJ00 RGVGGLAKAETSMRWAQVWREGEPGEPLWQ .: ..::.:. :. .: gi|739 AYAGVDSSAEASVLTEQAMKEMAYYNVL 640 650 660 >>gi|119927277|ref|XP_587728.3| PREDICTED: similar to hC (673 aa) initn: 657 init1: 452 opt: 465 Z-score: 565.8 bits: 112.6 E(): 8.3e-23 Smith-Waterman score: 465; 64.286% identity (77.679% similar) in 112 aa overlap (1-109:555-666) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|119 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 530 540 550 560 570 580 40 50 60 70 80 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQ--SRIDSSMAHSGVSSPI ::::::::::::::::::::::::::::.:::: .: :..::.. gi|119 KCPYCSSKFNLKGNLSRHMKVKHGVMDIGLDSQDPMMELTGTDPSELDSQQEMEDFEENA 590 600 610 620 630 640 90 100 110 mFLJ00 RGVGGL-AKAETSMRWAQVWREGEPGEPLWQ . .:. ..::.:. :. .: gi|119 YAYAGVDGSAEASVLSEQAMKEMAYYNVL 650 660 670 >>gi|26331632|dbj|BAC29546.1| unnamed protein product [M (285 aa) initn: 502 init1: 457 opt: 457 Z-score: 561.0 bits: 110.4 E(): 1.5e-22 Smith-Waterman score: 457; 100.000% identity (100.000% similar) in 63 aa overlap (1-63:167-229) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|263 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 140 150 160 170 180 190 40 50 60 70 80 90 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQSRIDSSMAHSGVSSPIRG ::::::::::::::::::::::::::::::::: gi|263 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQDPMMELAGPDPSELDNHQEMEDFEENA 200 210 220 230 240 250 100 110 mFLJ00 VGGLAKAETSMRWAQVWREGEPGEPLWQ gi|263 YTYSSVDSSAEASTLTEQAMKEMAYYNVL 260 270 280 >>gi|21732300|emb|CAD38540.1| hypothetical protein [Homo (205 aa) initn: 452 init1: 452 opt: 454 Z-score: 559.2 bits: 109.6 E(): 1.9e-22 Smith-Waterman score: 454; 62.500% identity (77.679% similar) in 112 aa overlap (1-109:87-198) 10 20 30 mFLJ00 PFKCKVCGKSFNRMYNLLGHMHLHAGSKPF :::::::::::::::::::::::::::::: gi|217 VRPYQCHICFKTFVQKQTLKTHMIVHSPVKPFKCKVCGKSFNRMYNLLGHMHLHAGSKPF 60 70 80 90 100 110 40 50 60 70 80 mFLJ00 KCPYCSSKFNLKGNLSRHMKVKHGVMDISLDSQGGWAVRSGQ--SRIDSSMAHSGVSSPI ::::::::::::::::::::::::::::.:::: .: :..:... gi|217 KCPYCSSKFNLKGNLSRHMKVKHGVMDIGLDSQDPMMELTGTDPSELDGQQEMEDFEENA 120 130 140 150 160 170 90 100 110 mFLJ00 RGVGGL-AKAETSMRWAQVWREGEPGEPLWQ . ... ..::.:. :. .: gi|217 YSYASVDSSAEASVLTEQAMKEMAYYNVL 180 190 200 118 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 05:19:46 2009 done: Fri Mar 13 05:23:31 2009 Total Scan time: 534.580 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]