# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mie28018.fasta.nr -Q ../query/mKIAA0105.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0105, 99 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920905 sequences Expectation_n fit: rho(ln(x))= 5.0957+/-0.000182; mu= 3.9333+/- 0.010 mean_var=73.5060+/-14.181, 0's: 42 Z-trim: 44 B-trim: 0 in 0/66 Lambda= 0.149594 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|119568008|gb|EAW47623.1| Wilms tumor 1 associat ( 130) 632 144.7 2.9e-33 gi|114610047|ref|XP_001149949.1| PREDICTED: Wilms' ( 170) 632 144.8 3.5e-33 gi|119568013|gb|EAW47628.1| Wilms tumor 1 associat ( 170) 632 144.8 3.5e-33 gi|149641160|ref|XP_001509735.1| PREDICTED: simila ( 246) 632 144.9 4.6e-33 gi|148670075|gb|EDL02022.1| mCG16685, isoform CRA_ ( 296) 632 145.0 5.3e-33 gi|119568012|gb|EAW47627.1| Wilms tumor 1 associat ( 159) 625 143.2 9.5e-33 gi|149250516|ref|XP_001480173.1| PREDICTED: simila ( 162) 625 143.2 9.6e-33 gi|119568011|gb|EAW47626.1| Wilms tumor 1 associat ( 165) 625 143.3 9.8e-33 gi|114610051|ref|XP_001150328.1| PREDICTED: simila ( 374) 625 143.5 1.8e-32 gi|11322455|emb|CAC16790.1| WTAP protein [Mus musc ( 379) 625 143.5 1.8e-32 gi|10334526|emb|CAC10188.1| WTAP protein [Homo sap ( 388) 625 143.5 1.9e-32 gi|148670077|gb|EDL02024.1| mCG16685, isoform CRA_ ( 394) 625 143.5 1.9e-32 gi|194033407|ref|XP_001928418.1| PREDICTED: simila ( 395) 625 143.5 1.9e-32 gi|165905578|ref|NP_001107014.1| Wilms' tumour 1-a ( 395) 625 143.5 1.9e-32 gi|149744000|ref|XP_001500805.1| PREDICTED: simila ( 396) 625 143.6 1.9e-32 gi|160358873|sp|Q9ER69.3|FL2D_MOUSE RecName: Full= ( 396) 625 143.6 1.9e-32 gi|158255144|dbj|BAF83543.1| unnamed protein produ ( 396) 625 143.6 1.9e-32 gi|114610043|ref|XP_518837.2| PREDICTED: Wilms' tu ( 396) 625 143.6 1.9e-32 gi|126311248|ref|XP_001381451.1| PREDICTED: hypoth ( 396) 625 143.6 1.9e-32 gi|47117889|sp|Q15007.2|FL2D_HUMAN RecName: Full=P ( 396) 625 143.6 1.9e-32 gi|109073157|ref|XP_001096785.1| PREDICTED: simila ( 396) 625 143.6 1.9e-32 gi|73946203|ref|XP_533464.2| PREDICTED: similar to ( 396) 625 143.6 1.9e-32 gi|148670076|gb|EDL02023.1| mCG16685, isoform CRA_ ( 396) 625 143.6 1.9e-32 gi|114610039|ref|XP_001150391.1| PREDICTED: simila ( 413) 625 143.6 2e-32 gi|148670073|gb|EDL02020.1| mCG16685, isoform CRA_ ( 541) 625 143.7 2.4e-32 gi|224048094|ref|XP_002189615.1| PREDICTED: simila ( 396) 620 142.5 4e-32 gi|50741755|ref|XP_419626.1| PREDICTED: similar to ( 396) 620 142.5 4e-32 gi|55962255|emb|CAI11703.1| Wilms tumor 1 associat ( 151) 612 140.4 6.4e-32 gi|86438111|gb|AAI12755.1| Wilms tumor 1 associate ( 151) 612 140.4 6.4e-32 gi|164448707|ref|NP_001106725.1| Wilms tumor 1 ass ( 396) 605 139.2 3.8e-31 gi|47224643|emb|CAG03627.1| unnamed protein produc ( 409) 605 139.2 3.9e-31 gi|209149579|gb|ACI32981.1| Pre-mRNA-splicing regu ( 415) 605 139.3 3.9e-31 gi|82187628|sp|Q7SXL7.1|FL2D_DANRE RecName: Full=P ( 423) 605 139.3 4e-31 gi|73993312|ref|XP_858471.1| PREDICTED: similar to ( 150) 599 137.6 4.4e-31 gi|82186378|sp|Q6P4K5.1|FL2D_XENTR RecName: Full=P ( 393) 600 138.2 8e-31 gi|123904533|sp|Q4KLT6.1|FL2D_XENLA RecName: Full= ( 393) 599 137.9 9.2e-31 gi|198285571|gb|ACH85324.1| Wilms tumor 1 associat ( 150) 591 135.9 1.5e-30 gi|149028282|gb|EDL83698.1| similar to Wilms tumor ( 144) 573 132.0 2.1e-29 gi|73951107|ref|XP_849116.1| PREDICTED: similar to ( 216) 570 131.5 4.5e-29 gi|210080110|gb|EEA29656.1| hypothetical protein B ( 342) 501 116.7 1.9e-24 gi|210123603|gb|EEA71303.1| hypothetical protein B ( 245) 494 115.1 4.3e-24 gi|12751109|gb|AAK07548.1|AF277190_1 PNAS-132 [Hom ( 74) 481 111.9 1.2e-23 gi|156225871|gb|EDO46685.1| predicted protein [Nem ( 408) 470 110.1 2.3e-22 gi|73993314|ref|XP_849342.1| PREDICTED: similar to ( 181) 441 103.6 9.4e-21 gi|149258350|ref|XP_001473632.1| PREDICTED: simila ( 85) 429 100.7 3.2e-20 gi|221129516|ref|XP_002159596.1| PREDICTED: simila ( 429) 430 101.5 9.4e-20 gi|73974530|ref|XP_539133.2| PREDICTED: similar to ( 84) 411 96.8 4.7e-19 gi|215491358|gb|EEC00999.1| pre-mRNA-splicing regu ( 252) 393 93.3 1.6e-17 gi|108870572|gb|EAT34797.1| hypothetical protein A ( 490) 395 94.0 2e-17 gi|167864727|gb|EDS28110.1| wilms tumor 1 associat ( 437) 393 93.5 2.4e-17 >>gi|119568008|gb|EAW47623.1| Wilms tumor 1 associated p (130 aa) initn: 632 init1: 632 opt: 632 Z-score: 753.6 bits: 144.7 E(): 2.9e-33 Smith-Waterman score: 632; 100.000% identity (100.000% similar) in 99 aa overlap (1-99:32-130) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|119 YGFFFIRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 70 80 90 100 110 120 mKIAA0 SAWKFTPDR ::::::::: gi|119 SAWKFTPDR 130 >>gi|114610047|ref|XP_001149949.1| PREDICTED: Wilms' tum (170 aa) initn: 632 init1: 632 opt: 632 Z-score: 752.0 bits: 144.8 E(): 3.5e-33 Smith-Waterman score: 632; 100.000% identity (100.000% similar) in 99 aa overlap (1-99:53-151) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|114 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 90 100 110 120 130 140 mKIAA0 SAWKFTPDR ::::::::: gi|114 SAWKFTPDRGLMASDYSEEVATSEKFPF 150 160 170 >>gi|119568013|gb|EAW47628.1| Wilms tumor 1 associated p (170 aa) initn: 632 init1: 632 opt: 632 Z-score: 752.0 bits: 144.8 E(): 3.5e-33 Smith-Waterman score: 632; 100.000% identity (100.000% similar) in 99 aa overlap (1-99:53-151) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|119 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 90 100 110 120 130 140 mKIAA0 SAWKFTPDR ::::::::: gi|119 SAWKFTPDRGLMASDYSEEVATSEKFPF 150 160 170 >>gi|149641160|ref|XP_001509735.1| PREDICTED: similar to (246 aa) initn: 632 init1: 632 opt: 632 Z-score: 749.8 bits: 144.9 E(): 4.6e-33 Smith-Waterman score: 632; 100.000% identity (100.000% similar) in 99 aa overlap (1-99:124-222) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|149 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 100 110 120 130 140 150 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 160 170 180 190 200 210 mKIAA0 SAWKFTPDR ::::::::: gi|149 SAWKFTPDRGLTAPDYSEEMTTSEKKNQKKFPF 220 230 240 >>gi|148670075|gb|EDL02022.1| mCG16685, isoform CRA_c [M (296 aa) initn: 632 init1: 632 opt: 632 Z-score: 748.7 bits: 145.0 E(): 5.3e-33 Smith-Waterman score: 632; 100.000% identity (100.000% similar) in 99 aa overlap (1-99:198-296) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|148 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 170 180 190 200 210 220 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 230 240 250 260 270 280 mKIAA0 SAWKFTPDR ::::::::: gi|148 SAWKFTPDR 290 >>gi|119568012|gb|EAW47627.1| Wilms tumor 1 associated p (159 aa) initn: 625 init1: 625 opt: 625 Z-score: 744.3 bits: 143.2 E(): 9.5e-33 Smith-Waterman score: 625; 100.000% identity (100.000% similar) in 98 aa overlap (1-98:53-150) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|119 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 90 100 110 120 130 140 mKIAA0 SAWKFTPDR :::::::: gi|119 SAWKFTPDSGCSVEANA 150 >>gi|149250516|ref|XP_001480173.1| PREDICTED: similar to (162 aa) initn: 625 init1: 625 opt: 625 Z-score: 744.2 bits: 143.2 E(): 9.6e-33 Smith-Waterman score: 625; 100.000% identity (100.000% similar) in 98 aa overlap (1-98:53-150) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|149 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 90 100 110 120 130 140 mKIAA0 SAWKFTPDR :::::::: gi|149 SAWKFTPDSFSLPLPLASEA 150 160 >>gi|119568011|gb|EAW47626.1| Wilms tumor 1 associated p (165 aa) initn: 625 init1: 625 opt: 625 Z-score: 744.1 bits: 143.3 E(): 9.8e-33 Smith-Waterman score: 625; 100.000% identity (100.000% similar) in 98 aa overlap (1-98:53-150) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|119 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 90 100 110 120 130 140 mKIAA0 SAWKFTPDR :::::::: gi|119 SAWKFTPDSQTGKKLMAKCRMLI 150 160 >>gi|114610051|ref|XP_001150328.1| PREDICTED: similar to (374 aa) initn: 625 init1: 625 opt: 625 Z-score: 739.2 bits: 143.5 E(): 1.8e-32 Smith-Waterman score: 625; 100.000% identity (100.000% similar) in 98 aa overlap (1-98:31-128) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|114 MDFFFIRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 70 80 90 100 110 120 mKIAA0 SAWKFTPDR :::::::: gi|114 SAWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQD 130 140 150 160 170 180 >>gi|11322455|emb|CAC16790.1| WTAP protein [Mus musculus (379 aa) initn: 625 init1: 625 opt: 625 Z-score: 739.1 bits: 143.5 E(): 1.8e-32 Smith-Waterman score: 625; 100.000% identity (100.000% similar) in 98 aa overlap (1-98:36-133) 10 20 30 mKIAA0 TGLRESEEKLKQQQQESARRENILVMRLAT :::::::::::::::::::::::::::::: gi|113 RDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLAT 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA0 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 KEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNEL 70 80 90 100 110 120 mKIAA0 SAWKFTPDR :::::::: gi|113 SAWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQD 130 140 150 160 170 180 99 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 21:45:51 2009 done: Thu Mar 12 21:49:27 2009 Total Scan time: 492.450 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]