Comparison of KIAA cDNA sequences between mouse and human (KIAA0105)
<<Original sequence data>>
mouse mKIAA0105 (mie28018) length: 1327 bp, CDS: 3 - 302
human KIAA0105 (ha00682) length: 1622 bp, CDS: 2 - 580
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 279 - 280 1 1 50.0
CDS: 281 - 580 282 18 6.0
3'UTR: 581 - 1632 917 107 10.4
amino acid
CDS: 281 - 580 100 0 0.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mie28018 1 .................................................. 1
ha00682 1 GGCCGGCGGCAGAGCTGTCCGGCTGCGCGGTGGCCCGGGGGGCCCGGGCG 50
A G G R A V R L R G G P G G P G G
51 ----+----*----+----*----+----*----+----*----+----* 100
mie28018 1 .................................................. 1
ha00682 51 GCAGGGCAAGCAGCGCGGCCTCGGCCTATGCGACCGGTGGCGCCGGCGCG 100
R A S S A A S A Y A T G G A G A
101 ----+----*----+----*----+----*----+----*----+----* 150
mie28018 1 .................................................. 1
ha00682 101 GCTTCTGCCTGGAGAGGATTCAAGATGACCAACGAAGAACCTCTTCCCAA 150
A S A W R G F K M T N E E P L P K
151 ----+----*----+----*----+----*----+----*----+----* 200
mie28018 1 .................................................. 1
ha00682 151 GAAGGTTCGATTGAGTGAAACAGACTTCAAAGTTATGGCAAGAGATGAGT 200
K V R L S E T D F K V M A R D E L
201 ----+----*----+----*----+----*----+----*----+----* 250
mie28018 1 .................................................. 1
ha00682 201 TAATTCTAAGATGGAAACAATATGAAGCATATGTACAAGCTTTGGAGGGC 250
I L R W K Q Y E A Y V Q A L E G
251 ----+----*----+----*----+----*----+----*----+----* 300
T G L R E S E
mie28018 1 ............................TGACTGGTTTAAGGGAATCTGA 22
| ||||| |||| || |||||
ha00682 251 AAGTACACAGATCTTAACTCTAATGATGTAACTGGCCTAAGAGAGTCTGA 300
K Y T D L N S N D V T G L R E S E
301 ----+----*----+----*----+----*----+----*----+----* 350
E K L K Q Q Q Q E S A R R E N I L
mie28018 23 AGAAAAACTAAAGCAGCAACAGCAGGAGTCTGCACGCAGGGAGAACATTC 72
||||||||||||||| |||||||||||||||||||||||||| ||||| |
ha00682 301 AGAAAAACTAAAGCAACAACAGCAGGAGTCTGCACGCAGGGAAAACATCC 350
E K L K Q Q Q Q E S A R R E N I L
351 ----+----*----+----*----+----*----+----*----+----* 400
V M R L A T K E Q E M Q E C T T
mie28018 73 TTGTCATGCGGCTAGCAACCAAAGAGCAGGAGATGCAAGAGTGCACCACT 122
|||| ||||| ||||||||||| || || |||||||||||||| || |||
ha00682 351 TTGTAATGCGACTAGCAACCAAGGAACAAGAGATGCAAGAGTGTACTACT 400
V M R L A T K E Q E M Q E C T T
401 ----+----*----+----*----+----*----+----*----+----* 450
Q I Q Y L K Q V Q Q P S V A Q L R
mie28018 123 CAAATCCAGTACCTCAAGCAAGTTCAGCAGCCGAGTGTGGCCCAACTGAG 172
||||||||||||||||||||||| ||||||||||| || |||||||||||
ha00682 401 CAAATCCAGTACCTCAAGCAAGTCCAGCAGCCGAGCGTTGCCCAACTGAG 450
Q I Q Y L K Q V Q Q P S V A Q L R
451 ----+----*----+----*----+----*----+----*----+----* 500
S T M V D P A I N L F F L K M K G
mie28018 173 ATCAACAATGGTAGACCCAGCAATCAACTTGTTTTTCCTAAAAATGAAAG 222
||||||||||||||||||||| ||||||||||||||||||||||||||||
ha00682 451 ATCAACAATGGTAGACCCAGCGATCAACTTGTTTTTCCTAAAAATGAAAG 500
S T M V D P A I N L F F L K M K G
501 ----+----*----+----*----+----*----+----*----+----* 550
E L E Q T K D K L E Q A Q N E L
mie28018 223 GTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTG 272
||||||||||||||||||||||||||||||||||||||||||||||||||
ha00682 501 GTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAATGAACTG 550
E L E Q T K D K L E Q A Q N E L
551 ----+----*----+----*----+----*----+----*----+----* 600
S A W K F T P D R *
mie28018 273 AGTGCCTGGAAGTTTACGCCTGATAGGTAAACAAATCATACTCCCCAGTC 322
||||||||||||||||||||||||||||||||||||||||||||||||||
ha00682 551 AGTGCCTGGAAGTTTACGCCTGATAGGTAAACAAATCATACTCCCCAGTC 600
S A W K F T P D R *
601 ----+----*----+----*----+----*----+----*----+----* 650
mie28018 323 AAGACTTCCCTGACAGTCCCACCTCGAGAAAGCTGTGGTGGGACAGCCAA 372
|||||||||||||||||||||| ||||||||||||||||||||||||||
ha00682 601 AAGACTTCCCTGACAGTCCCACTACGAGAAAGCTGTGGTGGGACAGCCAA 650
651 ----+----*----+----*----+----*----+----*----+----* 700
mie28018 373 GTACTCGTTTCCACACCAAGACTCAGACTTTTTGAGCC..AAAAAAGCCA 420
|||||||||||||||||||||||||||||||||||||| ||||||||||
ha00682 651 GTACTCGTTTCCACACCAAGACTCAGACTTTTTGAGCCAAAAAAAAGCCA 700
701 ----+----*----+----*----+----*----+----*----+----* 750
mie28018 421 CATTCTTATACTGTCCAGCTTGTAATGGTTAATGTAAAACTTAGCAGATG 470
|||||||| |||||||||||||||||||||||||||||||||| ||||||
ha00682 701 CATTCTTACACTGTCCAGCTTGTAATGGTTAATGTAAAACTTACCAGATG 750
751 ----+----*----+----*----+----*----+----*----+----* 800
mie28018 471 AACCTTGTGTTTCAGC..TTTTCTCTTCCCCTCCCCCTTGCTTCAGAGGC 518
|||||||||||||||| |||||| ||||||| |||||||||||||||||
ha00682 751 AACCTTGTGTTTCAGCTTTTTTCTTTTCCCCTTCCCCTTGCTTCAGAGGC 800
801 ----+----*----+----*----+----*----+----*----+----* 850
mie28018 519 CTGATGCCGTCGGACTATTCCGAAGAAGAGGCCAACTCCGAAAAATTCCC 568
|||||| ||||||||||||||||||||| ||||| |||||||||||||||
ha00682 801 CTGATGGCGTCGGACTATTCCGAAGAAGTGGCCACCTCCGAAAAATTCCC 850
851 ----+----*----+----*----+----*----+----*----+----* 900
mie28018 569 CTTCTAGGACATGTAGACACTTTGAAAAGTGTTTCTGTTTGAAGAAAATA 618
||||||| |||||||||||| |||| || |||||||||||||||||||||
ha00682 851 CTTCTAGAACATGTAGACAC.TTGAGAAATGTTTCTGTTTGAAGAAAATA 899
901 ----+----*----+----*----+----*----+----*----+----* 950
mie28018 619 GAGGGAAAAACAGAAGTCTTAAGTCTGTGGCACACTGTGTCTTCAGACAG 668
|||||| |||||||||||||||||||||||||||||||||||||||||||
ha00682 900 GAGGGAGAAACAGAAGTCTTAAGTCTGTGGCACACTGTGTCTTCAGACAG 949
951 ----+----*----+----*----+----*----+----*----+----* 1000
mie28018 669 TTTCGAGGATTGAAATCCTAGAGGTTTTAAATCATGAATTGAACATGTAA 718
||| |||| ||||| ||||||| ||||||||||||||||||||||||||
ha00682 950 TTTGAAGGAATGAAAACCTAGAGATTTTAAATCATGAATTGAACATGTAA 999
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mie28018 719 AATTCCAGTAAAATGTAAAAATGGAATATGCATCGCTCTTAGCCATGAGC 768
||||||||||||||||||||| ||||||||||||||||||| || |||||
ha00682 1000 AATTCCAGTAAAATGTAAAAACGGAATATGCATCGCTCTTAACCTTGAGC 1049
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mie28018 769 ATAGTGACTTAGAGACACTGTACATCAGTTATGCCAATAAGACTGTGGAC 818
||||||||||||||||||||| ||||||| |||||||||||||||||||
ha00682 1050 ATAGTGACTTAGAGACACTGTGTATCAGTTTTGCCAATAAGACTGTGGAC 1099
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mie28018 819 TTCATGA...TTGTTGAACTACTGGGTCAAAACTCAAATGAGGTGAA.TT 864
||||||| |||||||||| |||||||||||||||||||||||||| ||
ha00682 1100 TTCATGATTGTTGTTGAACTTCTGGGTCAAAACTCAAATGAGGTGAATTT 1149
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mie28018 865 TGCCTTTAAAGGACTTACTTATGCTAAGAACCAACT...AATAGCCGTGA 911
|||||||||||| ||| | |||| |||||||||| ||||| | |||
ha00682 1150 TGCCTTTAAAGGGTTTA..TTTGCTGAGAACCAACTTTCAATAGTCATGA 1197
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mie28018 912 GACAATCACGTCATAGCTACCAGTACAAGTAGAGCAAATATTTATCCATT 961
|| ||||| | |||| | | |||||||||| ||| ||||||| |||||
ha00682 1198 GAGAATCAAATAATAGATGTCCGTACAAGTAGCGCATATATTTAACCATT 1247
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mie28018 962 TAGCTCTGAGCTCTATATTATATAATGGAGCCTTAAATCTATGTGGTTTT 1011
||| | | ||||||||||| | | ||||||| |||| ||||||||||
ha00682 1248 TAGTTTGGGGCTCTATATTACTTGCTTGAGCCTT.AATCAATGTGGTTTT 1296
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mie28018 1012 TATCAATGGTTTGTCTTTTGAATGGTTGTGGAAACTGTAGATAACCTTAA 1061
|||||||||||| |||||||||||| ||||||||||||| ||| |
ha00682 1297 ATTCAATGGTTTGTTCTTTGAATGGTTGCAAAAACTGTAGATAATCTT.A 1345
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mie28018 1062 CCAAGGACTGTACAAACGTGAAGGTGTGGTCTCACACTTCAGGTTTAAAG 1111
| |||||||||||||| |||||||||||| ||| |||||||||| |||
ha00682 1346 CTGAGGACTGTACAAACATGAAGGTGTGGTATCAAACTTCAGGTTGAAAC 1395
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mie28018 1112 TGTTTGAAGCATTATAAGCATTCATTTCACAACTAGATTGTATATGGTAT 1161
||||||||||||||||| |||||||||||||||||||||||||| ||
ha00682 1396 TGTTTGAAGCATTATAAACATTCATTTCACAACTAGATTGTATAAGGATA 1445
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mie28018 1162 TTGGCTGTGATGAGACTCCCATTA..................TTCAGTAA 1193
|| ||||||||||||||| | | || | ||
ha00682 1446 TTAGCTGTGATGAGACTCACTGCATTATTTTTTTTAGTGAATTTTATGAA 1495
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mie28018 1194 ACCCTCATCTCATTCAGCAGGCACATGTT..AAACAGCATTGTCGTTGGT 1241
| || | | |||||| |||||||||||| ||| ||| |||||||||||
ha00682 1496 ATCCCCGTTCCATTCAACAGGCACATGTTTAAAAGAGCTTTGTCGTTGGT 1545
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mie28018 1242 GTGAAATGGGGGAATGTGTTCCTTCATTGTA.TTGGGCCTTTTGTATCTA 1290
|| ||||||||||||||||||||||||||| |||||||||||| ||
ha00682 1546 GT.TAATGGGGGAATGTGTTCCTTCATTGTATTTGGGCCTTTTG....TA 1590
1601 ----+----*----+----*----+----*----+-- 1637
mie28018 1291 TCGAATTCCTGATATTAAATTAAATGTGCCTTGAAAT 1327
| | | || |||||||||||||||||||||||
ha00682 1591 TTGCACTCTTGATATTAAATTAAATGTGCCTT..... 1622