Comparison of KIAA cDNA sequences between mouse and human (KIAA0120)
<<Original sequence data>>
mouse mKIAA0120 (mie11082) length: 1325 bp, CDS: 1 - 654
human KIAA0120 (ha01756) length: 1360 bp, CDS: 14 - 673
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 20 - 673 577 77 11.8
3'UTR: 674 - 1415 462 160 25.7
amino acid
CDS: 20 - 673 202 16 7.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
A L S S S P L G R S L
mie11082 1 ...................GCGCTCTCATCCAGCCCTCTTGGACGCTCTT 31
||||| |||||||| |||| ||||||
ha01756 1 GCCCTTGCCTTGAGTCAGTGCGCTGCTCTCCAGCCCGCTTGAACGCTCCC 50
V S A L L S S P L E R S P
51 ----+----*----+----*----+----*----+----*----+----* 100
P S P Q L L R M A N R G P S Y G
mie11082 32 TGCCATCACCACAGCTGCTCAGAATGGCCAACAGGGGACCTTCCTACGGC 81
|| |||| | | | |||||||||||||||||||| | || |||
ha01756 51 CGCAGCCACCGCCACCCATTGGAATGGCCAACAGGGGACCTGCATATGGC 100
Q P P P P I G M A N R G P A Y G
101 ----+----*----+----*----+----*----+----*----+----* 150
L S R E V Q Q K I E K Q Y D A D L
mie11082 82 CTGAGCCGAGAGGTGCAGCAGAAGATTGAGAAGCAGTACGACGCGGATCT 131
|||||||| ||||||||||||||||||||||| || || || || |||||
ha01756 101 CTGAGCCGGGAGGTGCAGCAGAAGATTGAGAAACAATATGATGCAGATCT 150
L S R E V Q Q K I E K Q Y D A D L
151 ----+----*----+----*----+----*----+----*----+----* 200
E Q I L I Q W I T T Q C R E D V G
mie11082 132 GGAGCAGATCCTCATCCAGTGGATCACCACTCAGTGCCGTGAGGACGTGG 181
|||||||||||| ||||||||||||||||| |||||||| |||| ||||
ha01756 151 GGAGCAGATCCTGATCCAGTGGATCACCACCCAGTGCCGAAAGGATGTGG 200
E Q I L I Q W I T T Q C R K D V G
201 ----+----*----+----*----+----*----+----*----+----* 250
Q P Q P G R E N F Q K W L K D G
mie11082 182 GCCAGCCCCAGCCTGGCCGTGAGAACTTCCAGAAGTGGCTCAAGGACGGC 231
||| |||||||||||| || |||||||||||||| ||||||||||| |||
ha01756 201 GCCGGCCCCAGCCTGGACGCGAGAACTTCCAGAACTGGCTCAAGGATGGC 250
R P Q P G R E N F Q N W L K D G
251 ----+----*----+----*----+----*----+----*----+----* 300
T V L C K L I N S L Y P E G Q A P
mie11082 232 ACGGTTCTGTGCAAGCTTATTAATTCACTGTATCCTGAGGGGCAGGCCCC 281
||||| || || |||| |||||| ||||||| || ||||||||||||||
ha01756 251 ACGGTGCTATGTGAGCTCATTAATGCACTGTACCCCGAGGGGCAGGCCCC 300
T V L C E L I N A L Y P E G Q A P
301 ----+----*----+----*----+----*----+----*----+----* 350
V K K I Q A S S M A F K Q M E Q I
mie11082 282 AGTAAAGAAGATCCAGGCCTCTTCGATGGCCTTCAAGCAGATGGAGCAGA 331
||||||||||||||||||||| | |||||||||||||||||||||||||
ha01756 301 AGTAAAGAAGATCCAGGCCTCCACCATGGCCTTCAAGCAGATGGAGCAGA 350
V K K I Q A S T M A F K Q M E Q I
351 ----+----*----+----*----+----*----+----*----+----* 400
S Q F L Q A A E R Y G I N T T D
mie11082 332 TCTCCCAGTTCCTGCAGGCAGCCGAGCGCTATGGCATTAACACCACGGAC 381
|||| ||||||||||| ||||| ||||||||||||||||||||||| |||
ha01756 351 TCTCTCAGTTCCTGCAAGCAGCTGAGCGCTATGGCATTAACACCACTGAC 400
S Q F L Q A A E R Y G I N T T D
401 ----+----*----+----*----+----*----+----*----+----* 450
I F Q T V D L W E G K N M A C V Q
mie11082 382 ATCTTCCAGACTGTGGATCTCTGGGAAGGAAAGAACATGGCTTGTGTGCA 431
|||||||| |||||||| ||||||||||||||||||||||| ||||||||
ha01756 401 ATCTTCCAAACTGTGGACCTCTGGGAAGGAAAGAACATGGCCTGTGTGCA 450
I F Q T V D L W E G K N M A C V Q
451 ----+----*----+----*----+----*----+----*----+----* 500
R T L M N L G G L A V A R D D G L
mie11082 432 GCGGACACTAATGAACCTGGGTGGGCTGGCAGTAGCCAGGGACGATGGGC 481
|||||| || ||||| ||||||||||||||||||||| | || |||||||
ha01756 451 GCGGACGCTGATGAATCTGGGTGGGCTGGCAGTAGCCCGAGATGATGGGC 500
R T L M N L G G L A V A R D D G L
501 ----+----*----+----*----+----*----+----*----+----* 550
F S G D P N W F P K K S K E N P
mie11082 482 TCTTCTCTGGGGATCCCAACTGGTTTCCTAAGAAATCCAAGGAGAACCCT 531
||||||||||||||||||||||||| |||||||||||||||||||| |||
ha01756 501 TCTTCTCTGGGGATCCCAACTGGTTCCCTAAGAAATCCAAGGAGAATCCT 550
F S G D P N W F P K K S K E N P
551 ----+----*----+----*----+----*----+----*----+----* 600
R N F S D N Q L Q E G K N V I G L
mie11082 532 CGGAACTTCTCGGACAACCAGTTGCAAGAGGGCAAGAACGTGATTGGGTT 581
||||||||||| || |||||| |||||||||||||||||||||| |||||
ha01756 551 CGGAACTTCTCAGATAACCAGCTGCAAGAGGGCAAGAACGTGATCGGGTT 600
R N F S D N Q L Q E G K N V I G L
601 ----+----*----+----*----+----*----+----*----+----* 650
Q M G T N R G A S Q A G M T G Y G
mie11082 582 GCAGATGGGCACCAACCGTGGAGCATCTCAGGCCGGCATGACCGGCTATG 631
||||||||||||||||| || || |||||||| |||||||| ||||| |
ha01756 601 ACAGATGGGCACCAACCGCGGGGCGTCTCAGGCAGGCATGACTGGCTACG 650
Q M G T N R G A S Q A G M T G Y G
651 ----+----*----+----*----+----*----+----*----+----* 700
M P R Q I L *
mie11082 632 GGATGCCACGGCAGATCCTCTGATCATACTCTCTCTCCTTCCCCTGCCCT 681
|||||||||| |||||||||||||| || | | | ||||||||||
ha01756 651 GGATGCCACGCCAGATCCTCTGATCCCACCCCAGGCCTTGCCCCTGCCCT 700
M P R Q I L *
701 ----+----*----+----*----+----*----+----*----+----* 750
mie11082 682 .CCATGAATGGTTAATATATATGTATATATATGTTTTAGCA..GACATTC 728
||| |||||||||||||||||||| |||||| |||||||| |||||||
ha01756 701 CCCACGAATGGTTAATATATATGTAGATATATATTTTAGCAGTGACATTC 750
751 ----+----*----+----*----+----*----+----*----+----* 800
mie11082 729 CCTGAGAGCCCCTGGATTGCTGAACTCCCCTCTGCCAGGGTCCAGG..CC 776
|| ||||||||| | | | |||| |||| |||||| || |
ha01756 751 CCAGAGAGCCCCAGAGCTCTCAAGCTCCTTTCTGTCAGGGTGGGGGGTTC 800
801 ----+----*----+----*----+----*----+----*----+----* 850
mie11082 777 AGCCTATCTTGTCACCACTGGCAGGGCCTGATAATTGCCTCTCTCTCTCT 826
||||| || ||||||| || | | ||||| | ||||||
ha01756 801 AGCCTGTCCTGTCACCTCT.GAGGTGCCTGCTGGCATCCTCTC....... 842
851 ----+----*----+----*----+----*----+----*----+----* 900
mie11082 827 CTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGG 876
| |
ha01756 843 ............................................CCCCAT 848
901 ----+----*----+----*----+----*----+----*----+----* 950
mie11082 877 GCTTACTAATGCATTCCTTCCCCCACAACCATCAAAACTGGACCAA.... 922
|||||||||| |||||| | ||||| | ||||||||||||||||||
ha01756 849 GCTTACTAATACATTCCCTTCCCCATAGCCATCAAAACTGGACCAACTGG 898
951 ----+----*----+----*----+----*----+----*----+----* 1000
mie11082 923 ......CAAAAACCCTGGGACCAAAGTTGCCTCCCCACAGCATCTTTCCT 966
| ||||||||||||| || || ||| || ||
ha01756 899 CCTCTTCCTTTCCCCTGGGACCAAAATTTAGGGGCCTCAGTCCCTCACCG 948
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mie11082 967 GCTTTCC........................................... 973
| | ||
ha01756 949 CCATGCCCTGGCCTATTCTGTCTCTCCTTCTTCCCCCTGGCCTGTTCTGT 998
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mie11082 974 .....TGATCTCTTCTTTTAGTCCATCCCTTGGCTAGGAGTCAGAGATTC 1018
| ||| | | || ||| || ||||| ||||||| ||| |
ha01756 999 CTCTGAGCTCTGTGTCCTCCGTTCATTCCATGGCTGGGAGTCACTGATGC 1048
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mie11082 1019 TGCC.CCATGGCCTGATGCTGCACCGACCCTTCCTTCTACAAGGAGGCCT 1067
|||| | ||||||||| || | |||| |||||||||| | || |
ha01756 1049 TGCCTCTGCCTTCTGATGCTGGACTG.GCCTTGCTTCTACAAGTATGCTT 1097
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mie11082 1068 CTCCTACAGCTGTGGCTGCAGGGACTTAATTTATAGGGAGGGGCCTGTG. 1116
|||| ||||||||||||||||| |||||||||||||||||| |||||||
ha01756 1098 CTCCCACAGCTGTGGCTGCAGGAACTTAATTTATAGGGAGGAGCCTGTGG 1147
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mie11082 1117 ..GCTGTCACTCCAGCCACAGCTG....GGCTGTACTTACCACACGTCT. 1159
|||| | ||||||||||||| | |||| || ||||||| |||
ha01756 1148 CAGCTGCTGCCCCAGCCACAGCTGCACTGACTGTGCTCACCACACATCTG 1197
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mie11082 1160 GGGCAGCTTTCCCTAGCAGAGGCTCT.TTGGCTTCTTTCTTTCCATTCCT 1208
||||||| |||||| |||| ||| || |||||||| |||||||||
ha01756 1198 GGGCAGCCTTCCCTGGCAGGGGCCCTCGTGGCTTCTCATTTTCCATTC.. 1245
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mie11082 1209 CTCTCACTGTGGCTAAGGGGTGGAGCAGAGGTA.......GGACGGCTGC 1251
| |||||||||||||||||||| | || | ||| ||||||
ha01756 1246 CCTTCACTGTGGCTAAGGGGTGGGGTGAGGGGATGGAGAGGGAGGGCTGC 1295
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mie11082 1252 CCACCATGCTCTGGGGCTTGACGAACACGAGTTTGCTGATTTTAAATAAA 1301
| |||||| |||||||||||| ||| | ||||||| |||||| || ||
ha01756 1296 CTACCATGGTCTGGGGCTTGAGGAAGATGAGTTTGTTGATTTAAATAAAG 1345
1401 ----+----*----+----*---- 1424
mie11082 1302 AAGATCTCATTTTGTTTTGCATGG 1325
|| | |||||||
ha01756 1346 AATTTGTCATTTTTG......... 1360