FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0793.ptfa, 186 aa vs ./tmplib.26680 library 1768831 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.0953+/-0.00415; mu= 15.1653+/- 0.279 mean_var=74.1504+/-16.908, 0's: 0 Z-trim: 13 B-trim: 0 in 0/36 Lambda= 0.1489 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1362 ( 1407 res) mia41047 (1407) 222 57 4.2e-09 mKIAA4239 ( 1059 res) mfj24184 (1059) 202 52 7e-08 mFLJ00274 ( 1530 res) mpf00869 (1530) 202 53 8.8e-08 mKIAA3018 ( 732 res) mbg08136 ( 732) 186 49 6.1e-07 mKIAA1686 ( 1205 res) mbg21605 (1205) 186 49 8.2e-07 mKIAA0969 ( 1106 res) mic02056 (1106) 153 42 0.00011 mKIAA0403 ( 423 res) mbp11090 ( 423) 122 35 0.006 mKIAA0302 ( 1972 res) mbg05848 (1972) 127 37 0.0073 mKIAA1200 ( 1447 res) mbg09531 (1447) 124 36 0.0094 >>mKIAA1362 ( 1407 res) mia41047 (1407 aa) initn: 169 init1: 144 opt: 222 Z-score: 255.7 bits: 56.9 E(): 4.2e-09 Smith-Waterman score: 222; 35.922% identity (37.374% ungapped) in 103 aa overlap (47-147:1305-1405) 20 30 40 50 60 70 mKIAA0 GSLEGNSQHRANTTMHVCWYRNTSVSRADHSAAVENQ-LSGYLLRKFKNSNGWQKLWVVF :: .:.. .:::: :. ... :..:: :. mKIAA1 KSPSSALSSVLHSIPSGRKQKKIPAALKEVSANTEDSTMSGYLYRSKGSKKPWKHLWFVI 1280 1290 1300 1310 1320 1330 80 90 100 110 120 130 mKIAA0 TNFCLFFYKTHQDDYPLASLPLLGYSVSLPREADSIHKDYVFKLQFKSHVYF-FRAESKY : :. : . .: : : ::::..:.: .. .: : ::.: :. :.. :.:.. . mKIAA1 KNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESK--VFQLLHKGMVFYVFKADDAH 1340 1350 1360 1370 1380 1390 140 150 160 170 180 mKIAA0 TFERWIDVIKRASSSPGRPPSFTQDCSHHSPGLEAEIREKEACPSPCLDKNL . .::::...... mKIAA1 STQRWIDAFQEGTVL 1400 >>mKIAA4239 ( 1059 res) mfj24184 (1059 aa) initn: 128 init1: 128 opt: 202 Z-score: 233.8 bits: 52.4 E(): 7e-08 Smith-Waterman score: 203; 31.765% identity (36.986% ungapped) in 170 aa overlap (14-178:889-1039) 10 20 30 40 mKIAA0 SDEVSLEESEDGRGNRGSLEGNSQHRANTTMHVCWYRNTSVSR : :: . ::: . : :. . mKIAA4 CGKCSEFRARLIYDNNRSNRVCTDCYVALHGAPGSSPACSQHTPQ--------RRRSILE 860 870 880 890 900 910 50 60 70 80 90 mKIAA0 ADHSAAVENQ-LSGYLLRKFKNSNGWQKLW-VVFTN--FCLFFYKTHQDDYPLASLPLLG . :.:.::. . ..: :...::.: : :: : . :..: . :: ::::.: mKIAA4 KQASVAAENSVICSFLHYMEKGGKGWHKAWFVVPENEPLVLYIYGAPQDVKAQRSLPLIG 920 930 940 950 960 970 100 110 120 130 140 150 mKIAA0 YSVSLPREADSIHKDYVFKLQFKSHV-YFFRAESKYTFERWIDVIKRASSSPGRPPSFTQ . :. :. .. . .:::. .::. ..: :.. .::. :. :: :: .: mKIAA4 FEVGPPEAGERPDRRHVFKIT-QSHLSWYFSPETEELQRRWMAVLGRA----GRGDTF-- 980 990 1000 1010 1020 160 170 180 mKIAA0 DCSHHSPGLEAEIREKEACPSPCLDKNL : .: : .: .: : : mKIAA4 -CP--GPTL-SEDKEMEETPVAASGATAEPPEASQTRDKT 1030 1040 1050 >>mFLJ00274 ( 1530 res) mpf00869 (1530 aa) initn: 154 init1: 154 opt: 202 Z-score: 232.1 bits: 52.6 E(): 8.8e-08 Smith-Waterman score: 202; 32.632% identity (32.979% ungapped) in 95 aa overlap (54-147:1434-1528) 30 40 50 60 70 80 mKIAA0 QHRANTTMHVCWYRNTSVSRADHSAAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFY .:::: : ... :.:::.:. . :. : mFLJ00 FQSISPSTFKKQKKVPSALSEVAASGEGSAISGYLSRCKSGKRRWKKLWLVIKGKVLYTY 1410 1420 1430 1440 1450 1460 90 100 110 120 130 140 mKIAA0 KTHQDDYPLASLPLLGYSVSLPREADSIHKDYVFKLQFKSHVYF-FRAESKYTFERWIDV . .: . :.::::.... .: : . ::.: :. ... :.::.. . .::... mFLJ00 LASEDKVAMESIPLLGFTIAPEKEEGSSEVGPVFHLYHKKTLFYSFKAEDSNSAQRWMEA 1470 1480 1490 1500 1510 1520 150 160 170 180 mKIAA0 IKRASSSPGRPPSFTQDCSHHSPGLEAEIREKEACPSPCLDKNL .. :: mFLJ00 MEDASVL 1530 >>mKIAA3018 ( 732 res) mbg08136 (732 aa) initn: 139 init1: 106 opt: 186 Z-score: 217.0 bits: 48.8 E(): 6.1e-07 Smith-Waterman score: 191; 28.729% identity (33.333% ungapped) in 181 aa overlap (7-183:127-286) 10 20 30 mKIAA0 SDEVSLEESEDGRGNRGSLEGNSQHRANTTMHVCWY :: :::.:.. ..:. : mKIAA3 AVPLSPGKAPEYITSNYDSDAMSSSYESYDEEEEDGKGKK------TRHQ--------WP 100 110 120 130 140 40 50 60 70 80 90 mKIAA0 RNTSVSRADHSAAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDYPLASLP . .:. . . . .. ..:::: : . : :: :. . :. ::. .:. : :: mKIAA3 SE----EASMDLVKDAKICAFLLRK-KRFGQWTKLLCVIKDTKLLCYKSSKDQQPQMELP 150 160 170 180 190 100 110 120 130 140 150 mKIAA0 LLGYSVS-LPREADSIHKDYVFKL-QFKSHVYFFRAESKYTFERWIDVIKRASSSPGRP- : : :.. .:: :: .: . .:. : . . ...: :.:. :::.: :. . : mKIAA3 LQGCSITYIPR--DSKKKKHELKITQQGTDPLVLAVQGKEQAEQWLKVIKEAYSDCSGPV 200 210 220 230 240 250 160 170 180 mKIAA0 -PSFTQDCSHHSPGLEAEIREKEACPSPCLDKNL : . : .: .::...: . : : mKIAA3 DPECSPPPSTSAPVNKAELEKKLSSERPSSDGEGGVENGVTTCNGKEQAKRKKPSKSEAK 260 270 280 290 300 310 mKIAA3 GTVSKVTGKKITKIIGLGKKKPSTDEQTSSAEEDVPTCGYLNVLSNSRWRERWCRVKDSK 320 330 340 350 360 370 >>mKIAA1686 ( 1205 res) mbg21605 (1205 aa) initn: 46 init1: 46 opt: 186 Z-score: 214.7 bits: 49.1 E(): 8.2e-07 Smith-Waterman score: 186; 25.000% identity (26.829% ungapped) in 132 aa overlap (26-153:84-210) 10 20 30 40 50 mKIAA0 SDEVSLEESEDGRGNRGSLEGNSQHRANTTMHVCWYRNTSVSRADHSAAVENQLS ::. .: :..:..: .. .:. mKIAA1 RPISMINEASNYNMASDYAVHPMSPVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRR--- 60 70 80 90 100 110 60 70 80 90 100 110 mKIAA0 GYLLRKFKNSNG---WQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYSVSLPREADSIH :.: .. .:.: :.: : :....:::.:. .... :.:. : ...... : :. mKIAA1 GWLYKQ--DSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIAMLTAEDHIN 120 130 140 150 160 120 130 140 150 160 170 mKIAA0 KDYVFKLQFKS-HVYFFRAESKYTFERWIDVIKRASSSPGRPPSFTQDCSHHSPGLEAEI . :.:: . ..:.: ... .: :. .. :. .: mKIAA1 RKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRITFNFRVDKITTDSA 170 180 190 200 210 220 180 mKIAA0 REKEACPSPCLDKNL mKIAA1 STKETNNIPNHRVLIRPEVQNHQKNKEISKIEEKRALEAERYGFQKDGQDRPLTKINSVK 230 240 250 260 270 280 >>mKIAA0969 ( 1106 res) mic02056 (1106 aa) initn: 184 init1: 111 opt: 153 Z-score: 176.7 bits: 41.9 E(): 0.00011 Smith-Waterman score: 166; 26.000% identity (31.707% ungapped) in 150 aa overlap (37-162:85-231) 10 20 30 40 50 60 mKIAA0 EESEDGRGNRGSLEGNSQHRANTTMHVCWYRNTSVSRADHSAAVENQLSGYLLRKFKNS- : :..: .. ... .:.: .. ... mKIAA0 ANHNMVSEVPPERPNIRATRTSRKAIAFGKRAHSMKRNPNAPVTK---AGWLYKQASSGV 60 70 80 90 100 110 70 80 90 100 110 120 mKIAA0 NGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYSVSLPREADSIHKDYVFKLQFK--- . :.: : :... :::.:: .... :.:.:::.. :. . .:.: . ..::. . mKIAA0 KQWNKRWFVLVDRCLFYYKDEKQESILGSIPLLSFRVAAVQPSDNISRKHTFKVTVHWVD 120 130 140 150 160 170 130 140 150 160 mKIAA0 ------SH------------VYFFRAESKYTFERWIDVIKRASSS--PGRPPSFTQDCSH .: .::: ::: : ::... .:. : : : : mKIAA0 EAGASSTHCLSPQAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQIPPAQKSVPQPVRH 180 190 200 210 220 230 170 180 mKIAA0 HSPGLEAEIREKEACPSPCLDKNL mKIAA0 SLEKPDSENIPPSKHHQQPPHNNLTKLEPEAKTRGEGDGRGCEKAERRPERPEVKKETLV 240 250 260 270 280 290 >>mKIAA0403 ( 423 res) mbp11090 (423 aa) initn: 60 init1: 60 opt: 122 Z-score: 145.3 bits: 34.7 E(): 0.006 Smith-Waterman score: 122; 25.000% identity (27.966% ungapped) in 132 aa overlap (56-180:31-155) 30 40 50 60 70 80 mKIAA0 RANTTMHVCWYRNTSVSRADHSAAVENQLSGYLLRKFKN----SNGWQKLWVVFTNFCLF :.: .: .. :: :.:.:::. . :. mKIAA0 HSPVHATLAGFFNMSRRRISCKDLGHADCQGWLYKKKEKGTFLSNKWKKFWVVLKGSSLY 10 20 30 40 50 60 90 100 110 120 130 140 mKIAA0 FYKTHQDDYPLASLPLLGYSVSLPREADSIHKDYVFKLQFKS-HVYFFRAESKYTFERWI .:.... . . . : ..: ..:. .: .::.. . ....: ::. .. :. mKIAA0 WYSNQMAEKADGFVNLSDFTV---ERASECKKKNAFKINHPQIKAFYFAAENLQEMNVWL 70 80 90 100 110 150 160 170 180 mKIAA0 DVIKRASSSPGRPPSFTQD--CSHHSPGLEAEIREKEACPSPCLDKNL . . : . . :.:.: : .: . :. :: : : mKIAA0 NKLGFAVT---HQESITKDEECYSESEQEDPEV-AVEAPPPPYASTTSSPVVRVDAAQWA 120 130 140 150 160 170 mKIAA0 SSSSPKRRETSCSFSSLENTVKAPSQFSSSGSKERQSWHNIVNSSPATEDAGLPLTFAEQ 180 190 200 210 220 230 >>mKIAA0302 ( 1972 res) mbg05848 (1972 aa) initn: 69 init1: 46 opt: 127 Z-score: 143.8 bits: 36.7 E(): 0.0073 Smith-Waterman score: 137; 31.176% identity (38.406% ungapped) in 170 aa overlap (7-151:1757-1919) 10 20 30 mKIAA0 SDEVSLEESEDGRGNRGSL-EGNS-----QHRANTT .:: ::.: .: .: . : :.. . mKIAA0 CTDTDSSQPLLEQQRLEQSNVPEGPGSGTGDESSGPRGERQTLPRGPAPSPMPQSRSSEA 1730 1740 1750 1760 1770 1780 40 50 60 70 80 mKIAA0 MHVCWYRNTSVSRADHSAAVENQLSGYLLRK-----F--KNSN-GWQKLWVVFTNFCLFF : : .:. . .: : :. :.: :: : : .: .::... :. : : mKIAA0 AH----GATLPTRGPELSAQE-QMEGMLCRKQEMEAFNKKAANRSWQNVYCVLRRGSLGF 1790 1800 1810 1820 1830 1840 90 100 110 120 130 mKIAA0 YKTHQDDYPLASLPLLG-YSVSLPREADSIHKDY-----VFKLQFKS-HVYFFRAESKYT :: . :..: : ::: : :. :: :::: ... . :.:.:... mKIAA0 YKDARAAS--AGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAE 1850 1860 1870 1880 1890 140 150 160 170 180 mKIAA0 FERWIDVIK----RASSSPGRPPSFTQDCSHHSPGLEAEIREKEACPSPCLDKNL . :. :.. :::.::. mKIAA0 MSSWLRVVNAAIATASSAPGESEEPVVPSASRGLTRAMTMPPVSQPEGSIVLRSKDGRER 1900 1910 1920 1930 1940 1950 >>mKIAA1200 ( 1447 res) mbg09531 (1447 aa) initn: 139 init1: 81 opt: 124 Z-score: 141.8 bits: 35.9 E(): 0.0094 Smith-Waterman score: 124; 26.168% identity (28.283% ungapped) in 107 aa overlap (55-158:667-768) 30 40 50 60 70 80 mKIAA0 HRANTTMHVCWYRNTSVSRADHSAAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYK :::::. . . :.. : :. . ...:: mKIAA1 ACSLDSDYSEPEHKLQRTSSYSTDGEALEKSGYLLKMGSRVKTWKRRWFVLRQGQILYYK 640 650 660 670 680 690 90 100 110 120 130 140 mKIAA0 THQD--DYPLASLPLLGYSVSLPREADSIHKDYVFKLQFKSHVYFFRAESKYTFERWIDV . .: : ... : .. .. :: .. .:.: ...:.. ::: .:.:: : mKIAA1 SPSDVIRKPQGQVDLNSHC-QIVREEEA----QTFQLISGNKTYYLTAESPSLLEEWIRV 700 710 720 730 740 750 150 160 170 180 mKIAA0 IKRA-SSSPGRPPSFTQDCSHHSPGLEAEIREKEACPSPCLDKNL .. . . ::.. : mKIAA1 LQSLLKVQVTGPPALHQGGTKPTVKGWLTKVKHGHSKLVWCALVGKTFYYYRSHEDKRPL 760 770 780 790 800 810 186 residues in 1 query sequences 1768831 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:28:47 2006 done: Mon Mar 27 10:28:48 2006 Scan time: 0.400 Display time: 0.080 Function used was FASTA [version 3.4t11 Apr 17, 2002]