# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mie06028.fasta.nr -Q ../query/mKIAA0107.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0107, 403 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920856 sequences Expectation_n fit: rho(ln(x))= 5.2587+/-0.000184; mu= 9.9023+/- 0.010 mean_var=72.8149+/-14.250, 0's: 44 Z-trim: 45 B-trim: 3062 in 1/66 Lambda= 0.150302 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|37748489|gb|AAH59159.1| Proteasome (prosome, ma ( 389) 2521 555.8 6.1e-156 gi|12845617|dbj|BAB26823.1| unnamed protein produc ( 389) 2513 554.1 2e-155 gi|90074922|dbj|BAE87141.1| unnamed protein produc ( 389) 2500 551.2 1.4e-154 gi|108860910|sp|Q3T0B2.1|PSMD6_BOVIN RecName: Full ( 389) 2490 549.1 6.4e-154 gi|73985103|ref|XP_541816.2| PREDICTED: similar to ( 389) 2468 544.3 1.7e-152 gi|39795842|gb|AAH64247.1| Proteasome (prosome, ma ( 389) 2365 522.0 9.2e-146 gi|27694784|gb|AAH43825.1| P44s10-prov protein [Xe ( 389) 2348 518.3 1.2e-144 gi|47219021|emb|CAG02059.1| unnamed protein produc ( 389) 2348 518.3 1.2e-144 gi|54038456|gb|AAH84351.1| LOC495148 protein [Xeno ( 389) 2343 517.2 2.5e-144 gi|209734766|gb|ACI68252.1| 26S proteasome non-ATP ( 389) 2316 511.3 1.5e-142 gi|29436940|gb|AAH49452.1| Proteasome (prosome, ma ( 386) 2312 510.5 2.6e-142 gi|197632215|gb|ACH70831.1| proteasome (prosome, m ( 389) 2310 510.0 3.6e-142 gi|194221159|ref|XP_001914718.1| PREDICTED: simila ( 350) 2208 487.9 1.5e-135 gi|109037704|ref|XP_001092218.1| PREDICTED: protea ( 350) 2200 486.2 5e-135 gi|194221161|ref|XP_001914711.1| PREDICTED: simila ( 340) 2198 485.7 6.6e-135 gi|119585830|gb|EAW65426.1| proteasome (prosome, m ( 343) 2195 485.1 1e-134 gi|109037698|ref|XP_001092334.1| PREDICTED: protea ( 351) 2192 484.4 1.7e-134 gi|114587651|ref|XP_520898.2| PREDICTED: proteasom ( 628) 2195 485.3 1.7e-134 gi|119585829|gb|EAW65425.1| proteasome (prosome, m ( 442) 2193 484.7 1.7e-134 gi|109037710|ref|XP_001092561.1| PREDICTED: protea ( 340) 2190 484.0 2.2e-134 gi|109037707|ref|XP_001092677.1| PREDICTED: protea ( 344) 2190 484.0 2.2e-134 gi|224066433|ref|XP_002191027.1| PREDICTED: simila ( 340) 2142 473.6 3e-131 gi|210107236|gb|EEA55182.1| hypothetical protein B ( 389) 1958 433.7 3.4e-119 gi|210122964|gb|EEA70667.1| hypothetical protein B ( 389) 1958 433.7 3.4e-119 gi|108873792|gb|EAT38017.1| 26S proteasome non-atp ( 389) 1910 423.3 4.6e-116 gi|66503873|ref|XP_624697.1| PREDICTED: similar to ( 389) 1908 422.9 6.3e-116 gi|167875710|gb|EDS39093.1| 26S proteasome non-ATP ( 389) 1907 422.7 7.3e-116 gi|156549024|ref|XP_001607901.1| PREDICTED: simila ( 389) 1897 420.5 3.3e-115 gi|55233320|gb|EAA01099.3| AGAP002061-PA [Anophele ( 389) 1851 410.5 3.3e-112 gi|194102516|gb|EDW24559.1| GL23337 [Drosophila pe ( 389) 1850 410.3 3.8e-112 gi|54638459|gb|EAL27861.1| GA18834 [Drosophila pse ( 389) 1849 410.1 4.4e-112 gi|80477211|gb|AAI08600.1| MGC131117 protein [Xeno ( 389) 1849 410.1 4.4e-112 gi|194165851|gb|EDW80752.1| GK11396 [Drosophila wi ( 389) 1842 408.6 1.3e-111 gi|193918030|gb|EDW16897.1| GI10792 [Drosophila mo ( 389) 1842 408.6 1.3e-111 gi|194141954|gb|EDW58362.1| GJ14389 [Drosophila vi ( 389) 1838 407.7 2.3e-111 gi|194184393|gb|EDW98004.1| Rpn7 [Drosophila yakub ( 389) 1834 406.8 4.2e-111 gi|193895782|gb|EDV94648.1| GH18475 [Drosophila gr ( 389) 1834 406.8 4.2e-111 gi|20978559|sp|Q9V3G7.1|PSMD6_DROME RecName: Full= ( 389) 1832 406.4 5.7e-111 gi|190656912|gb|EDV54144.1| GG12513 [Drosophila er ( 389) 1828 405.5 1e-110 gi|194121147|gb|EDW43190.1| GM23647 [Drosophila se ( 389) 1828 405.5 1e-110 gi|156209551|gb|EDO30816.1| predicted protein [Nem ( 389) 1823 404.4 2.2e-110 gi|198414190|ref|XP_002130443.1| PREDICTED: simila ( 385) 1782 395.5 1e-107 gi|215501714|gb|EEC11208.1| 26S proteasome regulat ( 389) 1782 395.6 1e-107 gi|91088601|ref|XP_973643.1| PREDICTED: similar to ( 389) 1767 392.3 1e-106 gi|108742460|gb|ABG01866.1| putative accessory gla ( 361) 1746 387.7 2.2e-105 gi|108742456|gb|ABG01864.1| putative accessory gla ( 362) 1744 387.3 3e-105 gi|108742452|gb|ABG01862.1| putative accessory gla ( 363) 1744 387.3 3e-105 gi|108742458|gb|ABG01865.1| putative accessory gla ( 363) 1743 387.1 3.5e-105 gi|73985099|ref|XP_855637.1| PREDICTED: similar to ( 290) 1720 382.0 9.3e-104 gi|73985101|ref|XP_855668.1| PREDICTED: similar to ( 350) 1720 382.1 1.1e-103 >>gi|37748489|gb|AAH59159.1| Proteasome (prosome, macrop (389 aa) initn: 2521 init1: 2521 opt: 2521 Z-score: 2956.0 bits: 555.8 E(): 6.1e-156 Smith-Waterman score: 2521; 98.972% identity (100.000% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::::::::::::::::::::::::.::::::::::: gi|377 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDTAVREELMAAVR 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|377 ENNMAPYYEALCKSLDWQMDMDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|377 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|377 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|377 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|377 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|377 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|12845617|dbj|BAB26823.1| unnamed protein product [M (389 aa) initn: 2513 init1: 2513 opt: 2513 Z-score: 2946.6 bits: 554.1 E(): 2e-155 Smith-Waterman score: 2513; 99.229% identity (99.486% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::::::::::. ::::::::::::::::::::::: gi|128 MPLENLEEEGLPKNPDLRIADCVFLLSLPEHRGDAAVREELMAAVR 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|128 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|90074922|dbj|BAE87141.1| unnamed protein product [M (389 aa) initn: 2500 init1: 2500 opt: 2500 Z-score: 2931.4 bits: 551.2 E(): 1.4e-154 Smith-Waterman score: 2500; 97.686% identity (100.000% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::::::::::::::::::::::::::::.::::::: gi|900 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVR 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA .:::::::::::.:::::.:::::.:::::::.::::::::::::::::::::::::::: gi|900 DNNMAPYYEALCRSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 KAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|900 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|900 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|900 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|108860910|sp|Q3T0B2.1|PSMD6_BOVIN RecName: Full=26S (389 aa) initn: 2490 init1: 2490 opt: 2490 Z-score: 2919.7 bits: 549.1 E(): 6.4e-154 Smith-Waterman score: 2490; 97.429% identity (99.743% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::::::::::::::::::::::::::::.::::::: gi|108 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVR 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA .::::::::::::::.::::::::.:::::::.::::::::::::::::::::::::::: gi|108 DNNMAPYYEALCKSLEWQMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS ::::::.::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|108 KAEYLCRIGDKEGALTAFRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|108 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::.:::::::::::::::::::: ::::::::::::::: gi|108 IDKVNEVVETNRPDSKNWQYQETIKKGGLLLNRVQKLSRVINM 350 360 370 380 >>gi|73985103|ref|XP_541816.2| PREDICTED: similar to 26S (389 aa) initn: 2468 init1: 2468 opt: 2468 Z-score: 2893.9 bits: 544.3 E(): 1.7e-152 Smith-Waterman score: 2468; 96.401% identity (99.229% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR :::::::::::::::::::::::::::::: :::: ::.::::: : gi|739 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEPRGDAPVRDELMAAFR 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA .:::::::::::::::::.:.:::.::.::::.::::::::::::::::::::::::::: gi|739 DNNMAPYYEALCKSLDWQLDTDLLNKMRKANEDELKRLDEELEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS ::::::..:::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KAEYLCRVGDKDGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|739 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|739 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|39795842|gb|AAH64247.1| Proteasome (prosome, macrop (389 aa) initn: 2365 init1: 2365 opt: 2365 Z-score: 2773.2 bits: 522.0 E(): 9.2e-146 Smith-Waterman score: 2365; 92.288% identity (97.429% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::::::::::::.::::::::: .. .: ::: :: gi|397 MPLENLEEEGLPKNPDLRIAQLKFLLSLPEHRREVPLRSELMEAVT 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA ::::::::.::: ::: .:.:::.::::::::::::::.:::::::::::::::::::: gi|397 SNNMAPYYEGLCKHLDWTVDMDLLNKMKKANEEELKRLDDELEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS .:::::.:::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|397 RAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKARS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|397 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAADLFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW :::::.::::::::::::::::::::::.:::::::::::::.::::::: ::::.:::: gi|397 SMIALDRPDLREKVIKGAEILEVLHSLPTVRQYLFSLYECRYGVFFQSLAAVEQELKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK ::: :::::::::::.::.::::::::::::::::::::::.:::::::::::::::::: gi|397 LFASHYRYYVREMRIQAYGQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|397 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|27694784|gb|AAH43825.1| P44s10-prov protein [Xenopu (389 aa) initn: 2348 init1: 2348 opt: 2348 Z-score: 2753.3 bits: 518.3 E(): 1.2e-144 Smith-Waterman score: 2348; 91.003% identity (97.429% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::.:::::.::::::::::::: :. .: ::: :: gi|276 MPLENLEEEGLPRNPDLRVAQLRFLLSLPEHRRDVPLRTELMEAVT 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA ::::::::.::: ::: .:.:::.::::::::::::::.::::::.::::::::::::: gi|276 VNNMAPYYEGLCKHLDWTVDTDLLNKMKKANEEELKRLDNELEDAEQNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS .:::::.:::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|276 RAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKARS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|276 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAADLFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW :::::.::::::::::::::::::::::.:::::::.:::::.::::::: ::::.:.:: gi|276 SMIALDRPDLREKVIKGAEILEVLHSLPTVRQYLFSMYECRYAVFFQSLAAVEQELKEDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK ::: :::::::::::..:.::::::::::::::::::::::.:::::::::::::::::: gi|276 LFASHYRYYVREMRIQTYGQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM :::::::::::::::::::::::::.::::::::::::::::: gi|276 IDKVNEIVETNRPDSKNWQYQETIKRGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|47219021|emb|CAG02059.1| unnamed protein product [T (389 aa) initn: 2348 init1: 2348 opt: 2348 Z-score: 2753.3 bits: 518.3 E(): 1.2e-144 Smith-Waterman score: 2348; 91.774% identity (97.172% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::::::::::::.:::.. :: :: :. ::: :.. gi|472 MPLENLEEEGLPKNPDLRIAQLKFLLTMDGHRQDAKVKTELMDAIK 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA :::::::: :::.:.::.::.::..:::::::::::::. ::::::::::::::::::: gi|472 ANNMAPYYECLCKDLNWQLDVELLNRMKKANEEELKRLDDVLEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS ::::: .::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|472 KAEYLIRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|472 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW ::::.::::::::::::::::::::::.:::::::::::::::::::::.::::::::: gi|472 CMIALKRPDLREKVIKGAEILEVLHSLPSVRQYLFSLYECRYSVFFQSLALVEQEMKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK :::::::::::::::.:::::::::::::::::::::::...:::::::::::::::::: gi|472 LFAPHYRYYVREMRIQAYSQLLESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|472 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|54038456|gb|AAH84351.1| LOC495148 protein [Xenopus (389 aa) initn: 2343 init1: 2343 opt: 2343 Z-score: 2747.4 bits: 517.2 E(): 2.5e-144 Smith-Waterman score: 2343; 91.260% identity (97.429% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::.:::::::::::::::.::::::::: :. .: ::: :: gi|540 MPLENLDEEGLPKNPDLRIAQLKFLLSLPEHRRDVPLRTELMEAVT 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA ::::::::.::: ::: .:..::.::::::::::::::..::::::::::::::::::: gi|540 VNNMAPYYEGLCKHLDWTVDTELLNKMKKANEEELKRLDDQLEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS .:::::.::.:.::::::::::::::::::::::::::::::::::::::::::::::.: gi|540 RAEYLCRIGNKDGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKARS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|540 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAADLFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW :::::.::::::::::::::::::::::.::::::::::::::::::::: ::::.:::: gi|540 SMIALDRPDLREKVIKGAEILEVLHSLPTVRQYLFSLYECRYSVFFQSLAAVEQELKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK ::: :::::::::::.::.::::::::::::.:::::::::.:::::::::::::::::: gi|540 LFASHYRYYVREMRIQAYGQLLESYRSLTLGHMAEAFGVGVEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|540 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 >>gi|209734766|gb|ACI68252.1| 26S proteasome non-ATPase (389 aa) initn: 2316 init1: 2316 opt: 2316 Z-score: 2715.8 bits: 511.3 E(): 1.5e-142 Smith-Waterman score: 2316; 90.231% identity (96.658% similar) in 389 aa overlap (15-403:1-389) 10 20 30 40 50 60 mKIAA0 GLCLVLSAGSCAVAMPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVREELMAAVR ::::::::::::::::::::::.:::.. :: : :. ::: ... gi|209 MPLENLEEEGLPKNPDLRIAQLKFLLTMDGHRQDDKVKTELMDSIK 10 20 30 40 70 80 90 100 110 120 mKIAA0 ENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMA :::::::::.:::.: ::.:.:::.:::::::.::::::. ::::::::::::::::::: gi|209 ENNMAPYYESLCKDLKWQLDTDLLNKMKKANEDELKRLDDVLEDAEKNLGESEIRDAMMA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 KAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS .:::: .::.:: ::::::::.:::::::::::::::::::::::::.:::::::::::: gi|209 RAEYLIRIGNKEDALTAFRKTFDKTVALGHRLDIVFYLLRIGLFYMDSDLITRNTEKAKS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 LIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 SMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDW ::::.::::::::::::::::::::::.::::::::::::::::::::: :::.::::: gi|209 CMIALKRPDLREKVIKGAEILEVLHSLPTVRQYLFSLYECRYSVFFQSLATVEQDMKKDW 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCK :::::::::::::::::::::::::::::::::::::::...:::::::::::::::::: gi|209 LFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCK 290 300 310 320 330 340 370 380 390 400 mKIAA0 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM ::::::::::::::::::::::::::::::::::::::::::: gi|209 IDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 350 360 370 380 403 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 21:54:30 2009 done: Thu Mar 12 22:00:56 2009 Total Scan time: 877.830 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]