Comparison of KIAA cDNA sequences between mouse and human (FLJ00327)
<<Original sequence data>>
mouse mFLJ00327 (mid41093) length: 3113 bp, CDS: 117 - 2762
human (sj02293) length: 4333 bp, CDS: 1220 - 2020
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 28 - 1662 603 636 51.3
CDS: 1663 - 2612 551 123 18.2
3'UTR: 2613 - 4937 516 127 19.8
amino acid
CDS: 1663 - 2612 178 89 33.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mid41093 1 ATTCTCCCTAGCAACTGCGGGTCTGCGGCGCCGCCGGCCTCCCGGGAGCG 50
| || | | || ||||
sj02293 1 ...........................GGCTGGCTTTCTTTCCACGAGCA 23
51 ----+----*----+----*----+----*----+----*----+----* 100
mid41093 51 ACGCTCGTGACAACTGAGCTGCTGAAGGCAGGAGGAACTCTGAGCTGAAT 100
||
sj02293 24 TGGC.............................................. 27
101 ----+----*----+----*----+----*----+----*----+----* 150
mid41093 101 AGTAGTGGGTCCCTGAATCTGGAGAGAAGACGCCACCTTGGAACCAGTAA 150
| | || || | | || | || | | |
sj02293 28 ..................CAGATGACGAGGCTCACCCGCAGCACTACTCA 59
151 ----+----*----+----*----+----*----+----*----+----* 200
mid41093 151 TGAACCATCCTGACTACAAGCTGAACCTTCGGTCTCCGGGGACCCCCAGA 200
||| | || ||| ||| |||
sj02293 60 ..CACCTCCAGGAAGGGAAGTTGATGGCAGGGT................. 90
201 ----+----*----+----*----+----*----+----*----+----* 250
mid41093 201 GGTGTGTCCTCTGTGGTTGGCCCGAGTGCTGTTGGTGCTTC..GCCAGGT 248
| ||| || | || ||| || ||||| || | |
sj02293 91 ...........TCTGGCTGCAGCCAGGCCTGCGGGAGCTTCCTCCCTGAT 129
251 ----+----*----+----*----+----*----+----*----+----* 300
mid41093 249 GACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAAGAAAAAGAGCATATT 298
| | |||| | ||| || | ||| | ||
sj02293 130 CTCTCTCACTCAAGGGGAAAGCTCAGGGCTGGGCATGAA........... 168
301 ----+----*----+----*----+----*----+----*----+----* 350
mid41093 299 TGAAACCTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAA 348
|| | | | ||||||
sj02293 169 ..............GGCTGGGGAAAGGCAGGGAAGGC............. 191
351 ----+----*----+----*----+----*----+----*----+----* 400
mid41093 349 CACTTATCCAGGGTGTATTGAGAATCAACCCAAAGAAGTTTCATGAAGCC 398
||| || ||| || | | ||| |
sj02293 192 ....................AGAGTCCCCCC.....AGGCTGGTCAAGGC 216
401 ----+----*----+----*----+----*----+----*----+----* 450
mid41093 399 TTCATTCCTTCTCCGGATGGTGATCGGGACATTTTTATTGATGGAGTTGT 448
| | | | | ||| | ||| ||| || |
sj02293 217 CCCGATAGCCCCATGTCTCCCTGAGGGGGCGGCTTTCCCCATGAAGAGGG 266
451 ----+----*----+----*----+----*----+----*----+----* 500
mid41093 449 TGCTCGTAATAGAGCCTTAAATGGGGACCTTGTGGTTGTAAAACTGCTTC 498
| || || | || | ||| |||| |
sj02293 267 TCCTGGTCACCAAGGC....ATGAGGACAT.................... 292
501 ----+----*----+----*----+----*----+----*----+----* 550
mid41093 499 CTGAGGATCAGTGGAAGGCAGTTAAACCAG...AGAGCAATGACAAAGAA 545
| || | | | | | | ||| ||| | | |
sj02293 293 .....GCCCAAGGCTGGCCCATCACAACAGGCTCCAGCTCTTGTGCACAT 337
551 ----+----*----+----*----+----*----+----*----+----* 600
mid41093 546 ATAGAAGCTACTTATGAAGCTGACATCCCTGAAGAGGGCTGTGGACATCA 595
| | || ||| | | | | || || || | |
sj02293 338 GTGTGATCTTCTTGTCCCACCAAAGGCGGGAAAAAGAAGTG....CGTGG 383
601 ----+----*----+----*----+----*----+----*----+----* 650
mid41093 596 CCCCCTGCAGCAG.TCCCGGAAAGGCTGGAGTGGTCCTGATGTCATTATA 644
|| ||||| ||| | | | |||||| |||| |||
sj02293 384 CCTCCTGCCCCAGATTTGGTGGTAGGGTCAGTGGTGCTGACCTCA..... 428
651 ----+----*----+----*----+----*----+----*----+----* 700
mid41093 645 GAGGCTCAGTTTGATGACAGCGACTCAGAAGATAGACATGGCAACACCAG 694
| | || |||| |||| | ||| |
sj02293 429 ...GTGCTGTGTGATACCAGCCCCCCAG...................CCT 456
701 ----+----*----+----*----+----*----+----*----+----* 750
mid41093 695 TGGCCTGGTTGATGGTGTTAAGAAATTGTCAATCTCTACTCCTGACAGAG 744
| |||||||| ||| | | || | | ||| | | | |
sj02293 457 TTGCCTGGTTCATG....TCCCACATCGCCTATCGGTCCCCGCTCCTTCA 502
751 ----+----*----+----*----+----*----+----*----+----* 800
mid41093 745 GAAAAGAAGATTCTAGTACTCCAGTTATGAAAGATGAGAACACCCCCATA 794
| | | || | || |||| | | ||| ||||
sj02293 503 GTCTGGGACCTTGGCCTGCT.CAGTCCTTCTGTGGGGAGCCACATCCATT 551
801 ----+----*----+----*----+----*----+----*----+----* 850
mid41093 795 CCACAGGACACAAGAGGCTTATCAGAGAAGTCACTTCAGAAATCAGCAAA 844
| ||| ||| || || | || || | | | |||||
sj02293 552 CACAGTGACTGTTGAGTCTAATGACAG.....ACACCCAAGTGCTGCAAA 596
851 ----+----*----+----*----+----*----+----*----+----* 900
mid41093 845 GGTGGTTTACATCTTGGAGAAAAAGCATTCTCGAGCAGCAACTGGCATCC 894
| | |||||| ||| |
sj02293 597 GCCAG.........................AGCAGCAGCCCCTGAAAGGG 621
901 ----+----*----+----*----+----*----+----*----+----* 950
mid41093 895 TGAAACTCTTGGCTGATAAGAACAGTGACCTGTTTAAGAAATACGCCCTG 944
||| || | | | ||| | | ||||||
sj02293 622 TGACTCTGGGGTC............TCACCCCATCCCCACTCCTGCCCTG 659
951 ----+----*----+----*----+----*----+----*----+----* 1000
mid41093 945 TTTTCTCCTTCAGACCACCGAGTACCTAGAATTTACGTACCTCTCAAGGA 994
| ||| | | | || ||
sj02293 660 TCCTCTGGTGAGGGCTTCCCTCCTGCT....................... 686
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mid41093 995 CTGTCCCCAGGACTTCATGACCCGACCTAAAGACTTTGCCAACACGCTGT 1044
|| ||| || || | | | |||| || | ||| |
sj02293 687 ...GCCTCAGACTGTCCTGTCTACCCTCAGAGACCCTGTTGGGAGGCT.T 732
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mid41093 1045 TCATCTGCCGCATCATAGACTGGAAGGAGGACTGTAATTTTGCCCTGGGG 1094
| || | || | | | | || | | || || |
sj02293 733 CCCTCCAACAAGGCACCGTCCCCAGAGGAGAAGGGAGCCCAGCACTCCTG 782
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mid41093 1095 CAACTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATCGAGCCTGAAACA.. 1142
|||| |||| |||| | || ||| |||
sj02293 783 GGACTG...........TGGGGTCCTTGGTCCACTCACCACTGCCACATG 821
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mid41093 1143 ...GAAGGGATACTGACAGAATATGGTGTG..GACTTCTCTGATTTCTCT 1187
| || || | || | | || | | | | | ||| |
sj02293 822 CCTCAGGGAGCCCTCAGAGCAGGGGCTGAGCTGGGGCCCCAGGGTTCCCA 871
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mid41093 1188 TCAGAAGTTCTTGAATGTCTCCCTC..AAAGCCTGCCCTGGACAATCCCA 1235
| | | | ||| ||||| | |||||| ||| |
sj02293 872 TGCCCTGGGCGAGCATGGTGCCCTCTTACAGCCTGGGCTGCCC....... 914
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mid41093 1236 CCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGACTGTATCTTCAC 1285
||| | | | |||| ||||
sj02293 915 ......................GAGTGTTCCAGGCATCCTGT.CATTCAG 941
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mid41093 1286 CATTGATCCATCAACTGCTCGCGACCTTGATGATGCCCTCGCCTGCAGGC 1335
|| |||| || | | | || ||| | |||
sj02293 942 CAGAGATCTTTCCTCGGTGCCTTCTCTGGAT..........TGGGTGGGC 981
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mid41093 1336 GGCTCACTGATGGCACCTTCGAAGTGGGCGTCCACATCGCCGATGTGAGT 1385
||| | ||| | | |||| | | |||| | |
sj02293 982 TGCTGAGCTCTGGGGCTGCTGCAGTG...AATTATTTAATAGATGGGTGC 1028
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mid41093 1386 TACTTTGTTCCTGAGGGATCCTCTTTGGATAAAGTAGCTGCTGAGAGAGC 1435
| | || || |||| || || ||| | ||| ||| | |
sj02293 1029 TTCCCTGCTCTCCAGGGTCCCCCTCTGGGAGAGCCAGCACAGGAGCTAAC 1078
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mid41093 1436 CACAAGTGTCTACTTGGTCCAGAAGGTGGTCCCCATGCTTCCCAGGCTTC 1485
| | | | |||||| |||
sj02293 1079 C..........AGTCAGAGGAGAAGGCGGT.................... 1098
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mid41093 1486 TGTGTGAGGAACTCTGCAGCCTCAACCCCATGACTGACAAGCTGACCTTC 1535
|| ||| || | ||||| | |||| |
sj02293 1099 ....GTAGACCAACTGGTGCAGGGAGACCATG...GGGGTGCTGGGCAAG 1141
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mid41093 1536 TCTGTGATCTGGAAGCTGACCCCTGAAGGCAAGATCCTTGAAGAGTGGTT 1585
| | || ||| | || | ||| | | || | || || |
sj02293 1142 ACAGGGACTTGGCGG..AACACATGAGATGAGGTAGCTGGGAGGTTGTCT 1189
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mid41093 1586 TGGCCGCACTATCATCCGTTCTTGCACCAAACTGAGCTACGACCATGCCC 1635
| | |||| |||| ||
sj02293 1190 T...............................TAAGCTGAGACC.TGAAG 1207
1651 ----+----*----+----*----+----*----+----*----+----* 1700
K I Q L R R S R K S F P
mid41093 1636 AGAGCATGATCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCC 1685
| | |||| || | | | | | | | || | ||| | |
sj02293 1208 GGTGATTGATAGAGAGCCAGGCCGGCTGCAGC...GTGGGAAAGCCTGCG 1254
R A R P A A A W E S L R
1701 ----+----*----+----*----+----*----+----*----+----* 1750
Q F L Q S T A
mid41093 1686 CCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCAGTCCTGAA 1735
| | || ||| | | |||||
sj02293 1255 CACCTGTCCCCAAACCCCAGCG............................ 1276
T C P Q T P A
1751 ----+----*----+----*----+----*----+----*----+----* 1800
L Q S N S A A
mid41093 1736 CCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCG 1785
| | || | | || ||
sj02293 1277 ...........GTCCCTCCCATCCCACCCACC.................. 1297
V P P I P P T
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mid41093 1786 CACTCCGTTTAGATCAGCTGAAGCTTGCTTTTACTCTGGACCATGAGACT 1835
sj02293 1298 .................................................. 1298
1851 ----+----*----+----*----+----*----+----*----+----* 1900
S N K L
mid41093 1836 GGACTGCCTCAAGGATGTCACATCTATGAGTACCGAGACAGCAACAAGCT 1885
| || |||
sj02293 1298 .......................................CTCTGCAGGCT 1308
L C R L
1901 ----+----*----+----*----+----*----+----*----+----* 1950
V E E F M L L A N M A V A H K I F
mid41093 1886 TGTAGAGGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCACAAGATCT 1935
|| ||||||||||||||| ||||||||||||| |||||||||||||||
sj02293 1309 CGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCC 1358
V E E F M L L A N M A V A H K I H
1951 ----+----*----+----*----+----*----+----*----+----* 2000
R T F P E Q A L L R R H P P P Q
mid41093 1936 TCCGCACCTTCCCTGAGCAGGCCCTGCTGCGCCGGCATCCCCCACCACAG 1985
|||| ||||||| ||||||||||||||||||||||| ||||| || ||
sj02293 1359 ACCGCGCCTTCCCCGAGCAGGCCCTGCTGCGCCGGCACCCCCCGCCCCAA 1408
R A F P E Q A L L R R H P P P Q
2001 ----+----*----+----*----+----*----+----*----+----* 2050
T K M L S D L V E F C D Q M G L P
mid41093 1986 ACGAAGATGCTCAGTGACCTGGTGGAGTTCTGTGACCAGATGGGGCTGCC 2035
|| | ||||||||||||||||||||| ||||| |||||||||||||||||
sj02293 1409 ACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCC 1458
T R M L S D L V E F C D Q M G L P
2051 ----+----*----+----*----+----*----+----*----+----* 2100
M D V S S A G A L N K S L T K T F
mid41093 2036 CATGGATGTCAGCTCTGCAGGGGCCCTAAATAAAAGCCTGACTAAGACAT 2085
| |||| ||||||| ||||| ||||| |||||||||||||| | ||||
sj02293 1459 CGTGGACTTCAGCTCCGCAGGAGCCCTCAATAAAAGCCTGACCCAAACAT 1508
V D F S S A G A L N K S L T Q T F
2101 ----+----*----+----*----+----*----+----*----+----* 2150
G D D K Y S L A R K E V L T N M
mid41093 2086 TTGGAGATGACAAGTACTCTCTGGCCCGGAAGGAGGTGCTCACCAACATG 2135
||||||||||||||||||| |||||||| |||||||||||||||||||||
sj02293 1509 TTGGAGATGACAAGTACTCACTGGCCCGCAAGGAGGTGCTCACCAACATG 1558
G D D K Y S L A R K E V L T N M
2151 ----+----*----+----*----+----*----+----*----+----* 2200
Y S R P M Q M A L Y F C S G M L Q
mid41093 2136 TACTCCCGGCCCATGCAGATGGCACTGTACTTCTGCTCTGGGATGCTGCA 2185
| |||||||||||||||||||||||||||||||||||| ||| |||||||
sj02293 1559 TGCTCCCGGCCCATGCAGATGGCACTGTACTTCTGCTCGGGGCTGCTGCA 1608
C S R P M Q M A L Y F C S G L L Q
2201 ----+----*----+----*----+----*----+----*----+----* 2250
D Q E Q F R H Y A L N V P L Y T H
mid41093 2186 GGACCAGGAGCAGTTCCGGCATTATGCTCTCAACGTTCCCCTCTACACAC 2235
||||| | |||||||||||| || || ||||| || ||||| |||||||
sj02293 1609 GGACCCAGCGCAGTTCCGGCACTACGCGCTCAATGTGCCCCTGTACACAC 1658
D P A Q F R H Y A L N V P L Y T H
2251 ----+----*----+----*----+----*----+----*----+----* 2300
F T S P I R R F A D V I V H R L
mid41093 2236 ACTTCACCTCTCCCATCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTC 2285
|||||||||| ||||||||||||||||| |||||| | ||||||||||||
sj02293 1659 ACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCACCGCCTC 1708
F T S P I R R F A D V L V H R L
2301 ----+----*----+----*----+----*----+----*----+----* 2350
L A A A L G Y S E Q P D V E P D T
mid41093 2286 CTGGCTGCTGCTCTGGGCTACAGTGAACAGCCAGATGTGGAGCCTGATAC 2335
|||||||| || | ||||| || || | | ||| ||| ||| |||||
sj02293 1709 CTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAGACATGGCGCCCGATAC 1758
L A A A L G Y R E R L D M A P D T
2351 ----+----*----+----*----+----*----+----*----+----* 2400
L Q K Q A D H C N D R R M A S K R
mid41093 2336 CCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAAC 2385
||| ||||| || || |||||||| || ||||| |||||||| ||||| |
sj02293 1759 CCTGCAGAAACAGGCGGACCACTGTAACGACCGCCGCATGGCGTCCAAGC 1808
L Q K Q A D H C N D R R M A S K R
2401 ----+----*----+----*----+----*----+----*----+----* 2450
V Q E L S I G L F F A V L V -
mid41093 2386 GTGTGCAGGAGCTCAGCATCGGCCTCTTCTTCGCAGTTCTAGTAA..... 2430
| |||||||||||||| | | | |||||||| || ||||| || |
sj02293 1809 GCGTGCAGGAGCTCAGTACCAGTCTCTTCTTTGCTGTTCTGGTCAAGGTG 1858
V Q E L S T S L F F A V L V K V
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mid41093 2431 .................................................. 2431
sj02293 1859 AGCCCTCCAGCCTGGTGCCCCTCACCTCCCTCTGGCTCCCGACCCTCCTG 1908
S P P A W C P S P P S G S R P S W
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mid41093 2431 .................................................. 2431
sj02293 1909 GGCACCTGCTCACCAGGAGGCCTCGAGGAGCCCAGGGCAGTGCCAGGAGG 1958
A P A H Q E A S R S P G Q C Q E V
2551 ----+----*----+----*----+----*----+----*----+----* 2600
R R V A P W S P
mid41093 2431 ..........................AGGAGAGTGGCCCCCTGGAGTCCG 2454
|||||||||||||||||||||| |
sj02293 1959 TGCCATGGCTGCAGCACTGTCCCTGCAGGAGAGTGGCCCCCTGGAGTCAG 2008
P W L Q H C P C R R V A P W S Q
2601 ----+----*----+----*----+----*----+----*----+----* 2650
K P W *
mid41093 2455 AAGCCATGGTGATGGGTGTCCTGAACCAAGCTTTCGACGTGCTGGTGCTG 2504
|||||||||||||||| ||||||| ||||| ||||||||||||||||||
sj02293 2009 AAGCCATGGTGATGGGCATCCTGAAGCAAGCCTTCGACGTGCTGGTGCTG 2058
K P W *
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mid41093 2505 CGCTTTGGGGTGCAGAAGCGCATCTACTGCA................... 2535
|||| || ||||||||||||||||||||||
sj02293 2059 CGCTACGGCGTGCAGAAGCGCATCTACTGCAACGTGAGTGCCCTGGGAGA 2108
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mid41093 2536 .................................................. 2536
sj02293 2109 GCCCGGGGGCGGGCAGGGCAGCCCAAGCCATCCCGCACTGGAGGGGCACA 2158
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mid41093 2536 .................................................. 2536
sj02293 2159 GGCTGTGATGGGTCACACTCCACCCCTCGCTCCCCCAGCCCTAGCACAAA 2208
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mid41093 2536 .................................................. 2536
sj02293 2209 GCCCACCTGATGGGCCTTGCTGAGACGCCCAGCTCTCCCACCTGGGATGG 2258
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mid41093 2536 .................................................. 2536
sj02293 2259 TGGCTCCAGGCCCAGGGTCAGGCCTGGCCCCCTTCCCCAAGGACCCAGGA 2308
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mid41093 2536 .................................................. 2536
sj02293 2309 ACCAGAGAGCAGGCCCCTCCATGGCCAGTACAGCTCGGCAGGGTGTGCAG 2358
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid41093 2536 .................................................. 2536
sj02293 2359 GCTTTGGGGACTGTGTTTATAGGAACGTGAAGGAATGAAAGGCCAGCGAA 2408
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid41093 2536 .................................................. 2536
sj02293 2409 TGGTCCGTGGCCGCTTTGGAAACTGTGTCCCCTGAAGACAAGGAAGAGAG 2458
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid41093 2536 .................................................. 2536
sj02293 2459 CTGTCCCTGGCTCGGCTCCTGCCCTGAGTGACTGTTGACTCACAGTTCTC 2508
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid41093 2536 .................................................. 2536
sj02293 2509 TCTCCAAGGGGACATGGGCCTGTCCTAATGCTGCCTTAGGGGCTTGGCTC 2558
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid41093 2536 .................................................. 2536
sj02293 2559 CAGCTGGCCCTGGGGTCTGCAGGTCACCACCTGCCTCTGTGCCTGGCTTT 2608
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid41093 2536 .................................................. 2536
sj02293 2609 GAATTTCCTAACATCCAGAGTGCCCTGGGAGTACAGTGTCCAGCCCGTTG 2658
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid41093 2536 .................................................. 2536
sj02293 2659 TGTGCAGTAAACGTGGTGTTCATAACCGGGAGCTGGGCAGAAGAGGAACG 2708
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid41093 2536 .................................................. 2536
sj02293 2709 ACAGAGTCCCCCTGCGGACCCTGGGGGCTCTGTATCCTGAAGTTCAAGCC 2758
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mid41093 2536 .................................................. 2536
sj02293 2759 TAGCTCACCCTGCTGTGGGCCCAGCCCTGCCTGCACTGACAGATGGCACC 2808
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mid41093 2536 .................................................. 2536
sj02293 2809 AGCAGGGGGCGCAGCGCTCCGCCGCCACAGTTCTCTGTCCCCACCTCAGT 2858
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mid41093 2536 .................................................. 2536
sj02293 2859 GCAGTCAGCCCTGGACCCCCCACCACTTGCCCCCCATAGCACACAGAGCC 2908
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mid41093 2536 .................................................. 2536
sj02293 2909 ACGGGCCTTCCCAGCCCCCACCCCTGGCCCTTGGTCACTCTCACCTGCTG 2958
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mid41093 2536 .................................................. 2536
sj02293 2959 CCTCAGCTGAAGGTGGCCTGGCAGGGCCTCCCTGAAGCTCCCTCCAGCCA 3008
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mid41093 2536 .................................................. 2536
sj02293 3009 GGCAAGGGTGGGCCAGGGCCGAGGGCTGGGGGCCGCCTCCAAGCATTGAA 3058
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mid41093 2536 .................................................. 2536
sj02293 3059 GCCCTCCAGGGGTGGAAGGGCAGGCAGCAGCATCCAGAGCTGAGGCCTGA 3108
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mid41093 2536 ...................ATGCACTGGCCCTGCGATCCTACAGCTTCCA 2566
| |||||||||||||| ||| || ||||||
sj02293 3109 GGCTTGGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCA 3158
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mid41093 2567 GAAGGTGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAGCCTGATGACC 2616
||||||||| |||||||| || ||||| || || ||||||||||| |||
sj02293 3159 GAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGCCTGAGGACA 3208
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mid41093 2617 TTGAAGAGGAGCCAACACAG.............................. 2636
| || |||||||| |||||
sj02293 3209 TGGAGCAGGAGCCAGCACAGCAGGTCAGAACCCCTCTGTGTCCCAGCCCC 3258
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mid41093 2637 .................................................. 2637
sj02293 3259 CTAAGTCCTGATGACCCCTCTCCTGCCTCCTGCGGTGCCCCTCATTCCTT 3308
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mid41093 2637 .................................................. 2637
sj02293 3309 CATCTGTGTCCCCTGGGCTCCCCCAGCACTGCAGCCTCCCGGGTGGGGTT 3358
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mid41093 2637 .................................................. 2637
sj02293 3359 TTAGGGCCCTCCCAGCTCACCCAGACCCCCTCCTGTGGGTCCTGCTTTCT 3408
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mid41093 2637 .................................................. 2637
sj02293 3409 GGCACCACCTTCCCTTCCTTGGGGGCAACCACAGTGGAGAGAGGAGGGGC 3458
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mid41093 2637 .................................................. 2637
sj02293 3459 TCTGCCTGTCCCGCTAATGCAGGGGTGCTGGCCTTCTAGGGTCCTTTAGA 3508
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mid41093 2637 .................................................. 2637
sj02293 3509 GAACCTGATGAAAGCTATGAGTTTACACCCAAGAAATTGTCTGGAACCGT 3558
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mid41093 2637 .................................................. 2637
sj02293 3559 TTTCACCAACAGTGTGCCCTGAACGCGGACCCAGGCCCTCAGGTTGTGTT 3608
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mid41093 2637 .................................................. 2637
sj02293 3609 TCATAAGCCTTGGGAGCGCTCAGGATGCATCTGACTCCCCAACTCTGCCC 3658
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mid41093 2637 .................................................. 2637
sj02293 3659 TGACCCAGGGCATTCTTCCTGGAGGGGGCCCCCATTACAGACAGGCGAGC 3708
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mid41093 2637 .................................................. 2637
sj02293 3709 AGAGGCTTCCAGAGGCCGAAGGAGGGGCCAGGGGTCCTGCTGCAGGGATG 3758
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mid41093 2637 .................................................. 2637
sj02293 3759 GAGGCAGAGCTGCGCCTCGACATCAGGCCCTGCCATCCTTGTCCCCTCAC 3808
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mid41093 2637 ..............CAGGTCATCACCATCTTCAGCCTGGTGGATGTGGTC 2672
||||||||||||||||||||||||||||| ||||||
sj02293 3809 GGCTGGGCTCTGCACAGGTCATCACCATCTTCAGCCTGGTGGAGGTGGTC 3858
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mid41093 2673 CTGCAGGCAGAGGCCACAGCCCTCAAGTACAGTGCTATCCTGAAGCGACC 2722
|||||||||||| ||||||||||||||||||| || ||||||||||| ||
sj02293 3859 CTGCAGGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCTGAAGCGGCC 3908
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mid41093 2723 AGGC...........................CTGGAGAAGGCGTCTGATG 2745
|||| |||| ||| |||||| |
sj02293 3909 AGGCACCCAGGGCCACCTGGGCCCTGAGAAGGAGGAGGAGGAGTCTGACG 3958
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mid41093 2746 AGGAGCCTGAGGACTGAA.....TGCTAGCCCAAGCCAGGCCTGTGCCTG 2790
||||| ||||||| || ||| | |||| | ||||
sj02293 3959 GTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGCCGCCTGCCCC 4008
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mid41093 2791 CCCTACCCTGCTGGCTT...........TTAGGAATAGGACCTTTTGACA 2829
||| ||| || || | | | |||||||| ||||||
sj02293 4009 GCCTGCCCCGCCTGCCTGTCCCGCCACACTGGCTTTAGGACCTGTTGACA 4058
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mid41093 2830 CCAAAGGGGATTTTTAATTTGGTTTTTAACAACTCAGGGGTTTGTTTTTA 2879
| | |||| ||||||||||||||||||||||||||||||||||||||||
sj02293 4059 CGGAGGGGGGTTTTTAATTTGGTTTTTAACAACTCAGGGGTTTGTTTTTA 4108
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mid41093 2880 TTTTTATTTTTCCTTTTATTTTACTTTTGCAGCTCAGTTTTTAAATGAAC 2929
| |||||||| | |||||||||||| ||||||| |||
sj02293 4109 T............TTTTATTTAATTTTTGCAGCTCAACTTTTAAACAAAC 4146
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mid41093 2930 TGGAAGGTTAGGGGTCAGG..GCAGGGGATGCTGAGGCCTGGCCTGTGCT 2977
|| | || |||| || | | || | |||||||||||| | | |
sj02293 4147 TGCAGGGGAGAGGGTGGGGCTGGAAGGAAGGCTGAGGCCTGGTCAGCAGT 4196
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mid41093 2978 TCCCTGAGCAGAGAGGATCCCAGTCCTCCTGGGCAGGCAGCCCCGCTTCT 3027
|| ||||||| | ||||||||||||||| | ||||| ||| |
sj02293 4197 GACCCCAGCAGAGCAGGCCCCAGTCCTCCTGGGAGGCTGGCCCCCCTTTT 4246
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mid41093 3028 ACCAGGCGACCCACTGCCCTTCCCTGCCCAGGAAAT.GGGGGGTTTCAGC 3076
| || | || |||||||| | ||||||||||||| |||||||||||||
sj02293 4247 TTCTGG.GCCCTACTGCCCTCCTCTGCCCAGGAAATGGGGGGGTTTCAGC 4295
4901 ----+----*----+----*----+----*----+--- 4938
mid41093 3077 AAATCAGTGTCATGGAATAAAATCAAGTGTGAATTGC. 3113
|| ||||||||| ||||||||||||||||| | |||
sj02293 4296 AACTCAGTGTCACAGAATAAAATCAAGTGTGGAGTGCC 4333