# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mid33058.fasta.nr -Q ../query/mKIAA0276.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0276, 232 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921060 sequences Expectation_n fit: rho(ln(x))= 4.6377+/-0.000178; mu= 10.2194+/- 0.010 mean_var=59.3670+/-11.372, 0's: 18 Z-trim: 24 B-trim: 0 in 0/66 Lambda= 0.166457 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|149035249|gb|EDL89953.1| DCN1, defective in cul ( 292) 1472 361.6 7.5e-98 gi|78099238|sp|Q8CCA0.1|DCNL4_MOUSE RecName: Full= ( 292) 1472 361.6 7.5e-98 gi|26345804|dbj|BAC36553.1| unnamed protein produc ( 306) 1472 361.6 7.8e-98 gi|194378872|dbj|BAG57987.1| unnamed protein produ ( 232) 1443 354.6 7.9e-96 gi|78099237|sp|Q92564.2|DCNL4_HUMAN RecName: Full= ( 292) 1443 354.6 9.4e-96 gi|31873984|emb|CAD97912.1| hypothetical protein [ ( 315) 1443 354.7 1e-95 gi|194378870|dbj|BAG57986.1| unnamed protein produ ( 336) 1443 354.7 1e-95 gi|109074871|ref|XP_001091219.1| PREDICTED: DCN1, ( 552) 1443 354.8 1.5e-95 gi|73975268|ref|XP_853724.1| PREDICTED: similar to ( 480) 1442 354.6 1.6e-95 gi|117644226|emb|CAL37607.1| hypothetical protein ( 292) 1438 353.4 2.2e-95 gi|117645304|emb|CAL38118.1| hypothetical protein ( 292) 1434 352.5 4.2e-95 gi|119625831|gb|EAX05426.1| DCN1, defective in cul ( 208) 1392 342.3 3.5e-92 gi|78099236|sp|Q5RHX6.2|DCNL4_DANRE RecName: Full= ( 280) 1317 324.4 1.2e-86 gi|55962799|emb|CAI11616.1| novel protein [Danio r ( 305) 1317 324.4 1.3e-86 gi|47219356|emb|CAG10985.1| unnamed protein produc ( 281) 1304 321.2 1e-85 gi|34785129|gb|AAH56731.1| Dcun1d5 protein [Danio ( 232) 1096 271.2 9.6e-71 gi|126360408|sp|Q1RMX9.1|DCNL5_BOVIN RecName: Full ( 236) 1096 271.2 9.7e-71 gi|50731117|ref|XP_417174.1| PREDICTED: hypothetic ( 236) 1093 270.5 1.6e-70 gi|74733117|sp|Q9BTE7.1|DCNL5_HUMAN RecName: Full= ( 237) 1093 270.5 1.6e-70 gi|73955218|ref|XP_544984.2| PREDICTED: similar to ( 237) 1092 270.3 1.9e-70 gi|114640094|ref|XP_508726.2| PREDICTED: similar t ( 358) 1093 270.7 2.2e-70 gi|126327114|ref|XP_001362798.1| PREDICTED: simila ( 237) 1091 270.0 2.2e-70 gi|224043568|ref|XP_002199948.1| PREDICTED: hypoth ( 206) 1089 269.5 2.8e-70 gi|197127256|gb|ACH43754.1| putative 4833420K19Rik ( 233) 1089 269.5 3.1e-70 gi|81909944|sp|Q5PPL2.1|DCNL5_RAT RecName: Full=DC ( 237) 1089 269.6 3.1e-70 gi|81904364|sp|Q9CXV9.1|DCNL5_MOUSE RecName: Full= ( 237) 1088 269.3 3.7e-70 gi|189442597|gb|AAI67304.1| Hypothetical protein L ( 232) 1087 269.1 4.3e-70 gi|149633269|ref|XP_001508736.1| PREDICTED: simila ( 206) 1083 268.1 7.6e-70 gi|119587442|gb|EAW67038.1| DCN1, defective in cul ( 239) 1083 268.1 8.5e-70 gi|109108484|ref|XP_001099105.1| PREDICTED: simila ( 211) 1081 267.6 1.1e-69 gi|89266885|emb|CAJ83955.1| conserved protein MGC2 ( 232) 1079 267.1 1.6e-69 gi|75042330|sp|Q5RDF9.1|DCNL5_PONAB RecName: Full= ( 237) 1079 267.2 1.7e-69 gi|51703689|gb|AAH81118.1| MGC83600 protein [Xenop ( 232) 1072 265.5 5.2e-69 gi|209734548|gb|ACI68143.1| DCN1-like protein 5 [S ( 233) 1061 262.8 3.3e-68 gi|26380824|dbj|BAB29526.2| unnamed protein produc ( 237) 1060 262.6 3.9e-68 gi|34596250|gb|AAQ76805.1| hypothetical protein [H ( 224) 1015 251.8 6.7e-65 gi|167875023|gb|EDS38406.1| conserved hypothetical ( 231) 997 247.5 1.4e-63 gi|108877291|gb|EAT41516.1| conserved hypothetical ( 242) 997 247.5 1.4e-63 gi|116129679|gb|EAA44922.3| AGAP002513-PA [Anophel ( 239) 995 247.0 2e-63 gi|66521752|ref|XP_393874.2| PREDICTED: similar to ( 478) 993 246.7 4.7e-63 gi|193899142|gb|EDV98008.1| GH14379 [Drosophila gr ( 246) 978 242.9 3.4e-62 gi|212512490|gb|EEB15253.1| conserved hypothetical ( 223) 976 242.4 4.4e-62 gi|194118155|gb|EDW40198.1| GL25128 [Drosophila pe ( 244) 976 242.4 4.7e-62 gi|190623943|gb|EDV39467.1| GF10048 [Drosophila an ( 246) 976 242.4 4.7e-62 gi|215504107|gb|EEC13601.1| conserved hypothetical ( 278) 976 242.5 5.2e-62 gi|194155181|gb|EDW70365.1| GJ11578 [Drosophila vi ( 246) 972 241.5 9.2e-62 gi|193920906|gb|EDW19773.1| GI11322 [Drosophila mo ( 246) 971 241.2 1.1e-61 gi|209734112|gb|ACI67925.1| DCN1-like protein 5 [S ( 221) 967 240.2 2e-61 gi|194186090|gb|EDW99701.1| GE23063 [Drosophila ya ( 248) 967 240.3 2.1e-61 gi|190655244|gb|EDV52487.1| GG16098 [Drosophila er ( 248) 967 240.3 2.1e-61 >>gi|149035249|gb|EDL89953.1| DCN1, defective in cullin (292 aa) initn: 1468 init1: 1468 opt: 1472 Z-score: 1913.0 bits: 361.6 E(): 7.5e-98 Smith-Waterman score: 1472; 94.372% identity (96.104% similar) in 231 aa overlap (3-232:62-292) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. :::::::::::::: gi|149 LNLTEDVGQDDHQTGSLRSCSSSDCFSKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYES 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE 220 230 240 250 260 270 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|149 DGAWPVLLDEFVEWYKDKQMS 280 290 >>gi|78099238|sp|Q8CCA0.1|DCNL4_MOUSE RecName: Full=DCN1 (292 aa) initn: 1468 init1: 1468 opt: 1472 Z-score: 1913.0 bits: 361.6 E(): 7.5e-98 Smith-Waterman score: 1472; 94.372% identity (96.104% similar) in 231 aa overlap (3-232:62-292) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. :::::::::::::: gi|780 LNLTEDVGQDDHQTGSLRSCSSSDCFSKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYES 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE 220 230 240 250 260 270 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|780 DGAWPVLLDEFVEWYKDKQMS 280 290 >>gi|26345804|dbj|BAC36553.1| unnamed protein product [M (306 aa) initn: 1468 init1: 1468 opt: 1472 Z-score: 1912.7 bits: 361.6 E(): 7.8e-98 Smith-Waterman score: 1472; 94.372% identity (96.104% similar) in 231 aa overlap (3-232:76-306) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. :::::::::::::: gi|263 LNLTEDVGQDDHQTGSLRSCSSSDCFSKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYES 50 60 70 80 90 100 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 110 120 130 140 150 160 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS 170 180 190 200 210 220 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE 230 240 250 260 270 280 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|263 DGAWPVLLDEFVEWYKDKQMS 290 300 >>gi|194378872|dbj|BAG57987.1| unnamed protein product [ (232 aa) initn: 1439 init1: 1439 opt: 1443 Z-score: 1876.8 bits: 354.6 E(): 7.9e-96 Smith-Waterman score: 1443; 91.342% identity (96.104% similar) in 231 aa overlap (3-232:2-232) 10 20 30 40 50 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYESTRIKTEEEAFSSKRCLEWFYEYAGTEDA : ... : :. ::::::::::::.::::::::::::::::::::::::::.:. gi|194 MPPRKKRRPASGDDLSAKKSRHDSMYRKYDSTRIKTEEEAFSSKRCLEWFYEYAGTDDV 10 20 30 40 50 60 70 80 90 100 110 mKIAA0 VGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|194 VGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNT 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 LDYLRSLLNDTTNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFL ::::::.:::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LDYLRSFLNDSTNFKLIYRYAFDFAREKDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFL 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 EQSKYKVINKDQWCNVLEFSRTISLDLSNYDEDGAWPVLLDEFVEWYKDKQMS :::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|194 EQSKYKVINKDQWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEWYKDKQMS 180 190 200 210 220 230 >>gi|78099237|sp|Q92564.2|DCNL4_HUMAN RecName: Full=DCN1 (292 aa) initn: 1439 init1: 1439 opt: 1443 Z-score: 1875.4 bits: 354.6 E(): 9.4e-96 Smith-Waterman score: 1443; 91.342% identity (96.104% similar) in 231 aa overlap (3-232:62-292) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. ::::::::::::.: gi|780 LNLTEDIGQDDHQTGSLRSCSSSDCFNKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYDS 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|780 TRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS ::::::::::::::::::::::::::.:::::::.:::.::::::::::::::::::::: gi|780 NMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFAREKDQRS 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|780 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDE 220 230 240 250 260 270 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|780 DGAWPVLLDEFVEWYKDKQMS 280 290 >>gi|31873984|emb|CAD97912.1| hypothetical protein [Homo (315 aa) initn: 1439 init1: 1439 opt: 1443 Z-score: 1874.9 bits: 354.7 E(): 1e-95 Smith-Waterman score: 1443; 91.342% identity (96.104% similar) in 231 aa overlap (3-232:85-315) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. ::::::::::::.: gi|318 LNLTEDIGQDDHQTGSLRSCSSSDCFNKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYDS 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|318 TRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS ::::::::::::::::::::::::::.:::::::.:::.::::::::::::::::::::: gi|318 NMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFAREKDQRS 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|318 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDE 240 250 260 270 280 290 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|318 DGAWPVLLDEFVEWYKDKQMS 300 310 >>gi|194378870|dbj|BAG57986.1| unnamed protein product [ (336 aa) initn: 1439 init1: 1439 opt: 1443 Z-score: 1874.5 bits: 354.7 E(): 1e-95 Smith-Waterman score: 1443; 91.342% identity (96.104% similar) in 231 aa overlap (3-232:106-336) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. ::::::::::::.: gi|194 LNLTEDIGQDDHQTGSLRSCSSSDCFNKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYDS 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|194 TRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS ::::::::::::::::::::::::::.:::::::.:::.::::::::::::::::::::: gi|194 NMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFAREKDQRS 200 210 220 230 240 250 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|194 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDE 260 270 280 290 300 310 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|194 DGAWPVLLDEFVEWYKDKQMS 320 330 >>gi|109074871|ref|XP_001091219.1| PREDICTED: DCN1, defe (552 aa) initn: 1439 init1: 1439 opt: 1443 Z-score: 1871.5 bits: 354.8 E(): 1.5e-95 Smith-Waterman score: 1443; 91.342% identity (96.104% similar) in 231 aa overlap (3-232:322-552) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. ::::::::::::.: gi|109 LNLTEDIGQDDHQTGSLRSCSSSDCFNKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYDS 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|109 TRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS ::::::::::::::::::::::::::.:::::::.:::.::::::::::::::::::::: gi|109 NMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFAREKDQRS 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDE 480 490 500 510 520 530 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|109 DGAWPVLLDEFVEWYKDKQMS 540 550 >>gi|73975268|ref|XP_853724.1| PREDICTED: similar to CG6 (480 aa) initn: 1438 init1: 1438 opt: 1442 Z-score: 1871.1 bits: 354.6 E(): 1.6e-95 Smith-Waterman score: 1442; 91.342% identity (96.104% similar) in 231 aa overlap (3-232:250-480) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. ::::::.:::::.: gi|739 LNLTEDVGQDDHPTGSLRSCSSSDCFSKVMPPRKKRRPASGDDLSAKKSRHDGMYRKYDS 220 230 240 250 260 270 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|739 TRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 280 290 300 310 320 330 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS ::::::::::::::::::::::::::.:::::::::::.::::::::::::::::::::: gi|739 NMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSLLNDSTNFKLIYRYAFDFAREKDQRS 340 350 360 370 380 390 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|739 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDE 400 410 420 430 440 450 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS ::::::::::::::::::::: gi|739 DGAWPVLLDEFVEWYKDKQMS 460 470 480 >>gi|117644226|emb|CAL37607.1| hypothetical protein [syn (292 aa) initn: 1434 init1: 1434 opt: 1438 Z-score: 1868.9 bits: 353.4 E(): 2.2e-95 Smith-Waterman score: 1438; 90.909% identity (96.104% similar) in 231 aa overlap (3-232:62-292) 10 20 30 mKIAA0 CHPGKREDLPLETTYLQ-KKSRHDSMYRKYES : ... : :. ::::::::::::.: gi|117 LNLTEDIGQDDHQTGSLRSCSSSDCFNKVMPPRKKRRPASGDDLSAKKSRHDSMYRKYDS 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA0 TRIKTEEEAFSSKRCLEWFYEYAGTEDAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ :::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::: gi|117 TRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQ 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA0 NMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRS ::::::::::::::::::::::::::.:::::::.:::.::::::::::::::::::::: gi|117 NMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFAREKDQRS 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA0 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISLDLSNYDE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|117 LDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINLDLSNYDE 220 230 240 250 260 270 220 230 mKIAA0 DGAWPVLLDEFVEWYKDKQMS :::::::::::::::.::::: gi|117 DGAWPVLLDEFVEWYEDKQMS 280 290 232 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 19:13:36 2009 done: Fri Mar 13 19:18:36 2009 Total Scan time: 709.340 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]