Comparison of KIAA cDNA sequences between mouse and human (FLJ00392)

<< Original sequence data >>

mouse  mFLJ00392 (mid31005)     length:   2424 bp
human     (sj05126)     length:   4224 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      333       269       64      19.22
  CDS2 :      644       523      121      18.79
  Total:      977       792      185      18.94

  3'UTR:      221       125       96      43.44

amino acid

  CDS1 :      111        93       18      16.22
  CDS2 :      216       173       43      19.91
  Total:      327       266       61      18.65
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse  1055 -  1387    695 -  1531    121 -   231
         human  2434 -  2766   2392 -  3126     15 -   125
  CDS2 : mouse  1534 -  2178   1486 -  2178      1 -   215
         human  3351 -  4007   3183 -  4007     57 -   275
  3'UTR: mouse  2179 -  2424
         human  4008 -  4224
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
           121 L  E  E  V  R  Q  F  L  T  S  G  V  S  P  N  L  A  137
mid31005  1055 TTGGAGGAAGTCCGCCAGTTCCTTACCAGTGGGGTTAGCCCCAACCTGGC 1104
                |    | ||||||||||||||||   |||||||| |||||  || ||||
sj05126   2434 CTTTTTGCAGTCCGCCAGTTCCTTGGGAGTGGGGTCAGCCCTGACTTGGC 2483
            15 L  F  A  V  R  Q  F  L  G  S  G  V  S  P  D  L  A  31

            51 ----+----*----+----*----+----*----+----*----+----* 100
           138  N  E  D  G  L  T  A  L  H  Q  C  C  I  D  D  F  Q 154
mid31005  1105 CAATGAAGATGGCTTGACTGCACTGCACCAGTGCTGCATTGACGACTTCC 1154
               ||| || || ||| |||| || |||||||||||||||||||| || ||||
sj05126   2484 CAACGAGGACGGCCTGACGGCCCTGCACCAGTGCTGCATTGATGATTTCC 2533
            32  N  E  D  G  L  T  A  L  H  Q  C  C  I  D  D  F  R 48

           101 ----+----*----+----*----+----*----+----*----+----* 150
           155   E  M  A  Q  Q  L  L  D  A  G  A  D  V  N  A  R   170
mid31005  1155 AAGAGATGGCACAGCAGCTCCTGGACGCTGGGGCTGATGTCAATGCTCGA 1204
                ||||||||  |||||||||||||| ||||||||  |  |||||||  | 
sj05126   2534 GAGAGATGGTGCAGCAGCTCCTGGAGGCTGGGGCCAACATCAATGCCTGT 2583
            49   E  M  V  Q  Q  L  L  E  A  G  A  N  I  N  A  C   64

           151 ----+----*----+----*----+----*----+----*----+----* 200
           171 D  S  E  C  W  T  P  L  H  A  A  A  T  C  G  H  L  187
mid31005  1205 GACAGTGAGTGCTGGACACCTCTGCATGCTGCAGCTACCTGTGGCCATCT 1254
               ||||||||||||||||| |||||||||||||| || ||||| ||||| ||
sj05126   2584 GACAGTGAGTGCTGGACGCCTCTGCATGCTGCGGCCACCTGCGGCCACCT 2633
            65 D  S  E  C  W  T  P  L  H  A  A  A  T  C  G  H  L  81

           201 ----+----*----+----*----+----*----+----*----+----* 250
           188  H  L  V  E  L  L  I  S  R  G  A  D  L  L  A  V  N 204
mid31005  1255 GCATCTGGTGGAACTCCTTATTTCACGTGGTGCAGATCTCCTTGCAGTCA 1304
               ||| |||||||| || || ||  |  |||| ||  ||||||| || ||||
sj05126   2634 GCACCTGGTGGAGCTGCTCATCGCCAGTGGCGCCAATCTCCTGGCGGTCA 2683
            82  H  L  V  E  L  L  I  A  S  G  A  N  L  L  A  V  N 98

           251 ----+----*----+----*----+----*----+----*----+----* 300
           205   S  D  G  N  M  P  Y  D  L  C  E  D  A  Q  T  L   220
mid31005  1305 ATTCCGATGGGAATATGCCCTACGACCTGTGTGAGGACGCACAGACGCTG 1354
               |  |||| ||||| |||||||| ||||||||||| || |  |||||||||
sj05126   2684 ACACCGACGGGAACATGCCCTATGACCTGTGTGATGATGAGCAGACGCTG 2733
            99   T  D  G  N  M  P  Y  D  L  C  D  D  E  Q  T  L   114

           301 ----+----*----+----*----+----*--- 333
           221 D  C  L  E  T  A  M  A  N  Q  G   231
mid31005  1355 GATTGCCTTGAGACTGCCATGGCCAACCAGGGT 1387
               || ||||| ||||||||||||||| |||  |||
sj05126   2734 GACTGCCTGGAGACTGCCATGGCCGACCGTGGT 2766
           115 D  C  L  E  T  A  M  A  D  R  G   125



*--[ CDS2 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 R  A  K  L  L  E  L  K  H  K  Q  D  A  L  L  R  A  17
mid31005  1534 AGAGCCAAACTGCTGGAGCTCAAGCACAAGCAAGATGCACTCCTGCGGGC 1583
                | ||||| ||||||||||| ||||||||||| || || |||||||| ||
sj05126   3351 CGGGCCAAGCTGCTGGAGCTGAAGCACAAGCACGACGCCCTCCTGCGCGC 3400
            57 R  A  K  L  L  E  L  K  H  K  H  D  A  L  L  R  A  73

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  Q  G  R  Q  R  S  L  L  R  R  R  T  S  S  A  G  S 34
mid31005  1584 CCAGGGCCGCCAGCGCTCCCTGCTGCGCCGCCGTACCTCTAGTGCAGGCA 1633
               |||| |||||||||||||| ||||||||||||| ||||| || || ||||
sj05126   3401 CCAGAGCCGCCAGCGCTCCTTGCTGCGCCGCCGCACCTCCAGCGCCGGCA 3450
            74  Q  S  R  Q  R  S  L  L  R  R  R  T  S  S  A  G  S 90

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   R  G  K  V  V  R  R  V  S  L  T  H  R  T  N  L   50
mid31005  1634 GCCGTGGGAAGGTGGTGAGACGAGTGAGCCTGACACATCGCACCAACCTG 1683
               |||| |||||||||||||| || |||||||| || || |||||| |||||
sj05126   3451 GCCGCGGGAAGGTGGTGAGGCGGGTGAGCCTAACCCAGCGCACCGACCTG 3500
            91   R  G  K  V  V  R  R  V  S  L  T  Q  R  T  D  L   106

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 Y  R  K  E  H  A  Q  E  A  I  V  W  Q  Q  P  P  P  67
mid31005  1684 TACCGCAAGGAGCATGCCCAAGAGGCCATTGTGTGGCAGCAGCCGCCACC 1733
               ||||||||| |||| ||||| |||||||| |||||||| |||||||| ||
sj05126   3501 TACCGCAAGCAGCACGCCCAGGAGGCCATCGTGTGGCAACAGCCGCCGCC 3550
           107 Y  R  K  Q  H  A  Q  E  A  I  V  W  Q  Q  P  P  P  123

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  T  S  P  E  P  L  E  D  .  E  D  R  Q  T  D  A  E 83
mid31005  1734 CACCAGTCCAGAACCTCTAGAGGAT...GAGGACAGGCAGACAGACGCTG 1780
               |||||| || || || |  |||||    || ||| | ||||||| ||| |
sj05126   3551 CACCAGCCCGGAGCCGCCCGAGGACAACGATGACCGCCAGACAGGCGCAG 3600
           124  T  S  P  E  P  P  E  D  N  D  D  R  Q  T  G  A  E 140

           251 ----+----*----+----*----+----*----+----*----+----* 300
            84   L  R  L  Q  P  P  E  D  D  G  P  E  V  A  R  P   99
mid31005  1781 AGCTCCGGCTGCAGCCCCCGGAGGACGATGGCCCTGAGGTGGCCAGACCA 1830
               ||||| ||| || |||||||||||| ||   ||| || |||| ||| || 
sj05126   3601 AGCTCAGGCCGCCGCCCCCGGAGGAGGACAACCCCGAAGTGGTCAGGCCG 3650
           141   L  R  P  P  P  P  E  E  D  N  P  E  V  V  R  P   156

           301 ----+----*----+----*----+----*----+----*----+----* 350
           100 H  N  G  Q  V  G  A  P  P  G  R  H  L  Y  S  K  R  116
mid31005  1831 CACAATGGCCAAGTAGGGGCCCCCCCCGGGAGACACCTGTACTCCAAGCG 1880
               |||||||||| |||||||| | |||| | | | || || |||||||||||
sj05126   3651 CACAATGGCCGAGTAGGGGGCTCCCCAGTGCGGCATCTATACTCCAAGCG 3700
           157 H  N  G  R  V  G  G  S  P  V  R  H  L  Y  S  K  R  173

           351 ----+----*----+----*----+----*----+----*----+----* 400
           117  L  D  R  S  V  S  Y  H  L  S  P  E  E  N  S  A  P 133
mid31005  1881 TCTAGATCGGAGTGTCTCCTATCATCTGAGTCCTGAGGAGAACAGTGCCC 1930
                ||||| |||||||||||||| || ||||| ||   ||| | ||   |||
sj05126   3701 ACTAGACCGGAGTGTCTCCTACCAGCTGAGCCCCCTGGACAGCACCACCC 3750
           174  L  D  R  S  V  S  Y  Q  L  S  P  L  D  S  T  T  P 190

           401 ----+----*----+----*----+----*----+----*----+----* 450
           134   D  A  L  V  R  D  K  A  H  H  T  L  A  E  L  K   149
mid31005  1931 CTGATGCCCTCGTCCGGGACAAGGCCCACCACACACTGGCAGAACTGAAA 1980
               |  |  |||| ||||  ||||||||||||||||| ||||| || ||||| 
sj05126   3751 CCCACACCCTGGTCCACGACAAGGCCCACCACACCCTGGCTGACCTGAAG 3800
           191   H  T  L  V  H  D  K  A  H  H  T  L  A  D  L  K   206

           451 ----+----*----+----*----+----*----+----*----+----* 500
           150 R  Q  R  A  A  A  K  L  Q  R  P  A  P  E  G  P  E  166
mid31005  1981 CGCCAGCGAGCGGCTGCAAAGCTTCAGCGACCTGCCCCTGAAGGGCCTGA 2030
               ||||||||||| ||||| ||||| ||||||||  | ||||| ||||| ||
sj05126   3801 CGCCAGCGAGCTGCTGCCAAGCTGCAGCGACCCCCACCTGAGGGGCCCGA 3850
           207 R  Q  R  A  A  A  K  L  Q  R  P  P  P  E  G  P  E  223

           501 ----+----*----+----*----+----*----+----*----+----* 550
           167  .  .  .  T  F  E  P  G  L  S  V  D  A  G  T  S  Q 180
mid31005  2031 G.........ACTTTTGAGCCTGGCCTGTCTGTTGATGCTGGGACCTCCC 2071
               |         ||   ||||||||||||| ||| |||  | | |||| |||
sj05126   3851 GAGCCCTGAGACAGCTGAGCCTGGCCTGCCTGGTGACACGGTGACCCCCC 3900
           224  S  P  E  T  A  E  P  G  L  P  G  D  T  V  T  P  Q 240

           551 ----+----*----+----*----+----*----+----*----+----* 600
           181   P  D  C  G  F  S  T  I  G  D  P  P  L  L  K  L   196
mid31005  2072 AGCCTGACTGTGGCTTCAGCACAATTGGGGACCCGCCCCTGCTCAAGCTC 2121
               |||||||||||||||||||  ||   |||||||| |||||||||||||||
sj05126   3901 AGCCTGACTGTGGCTTCAGGGCAGGCGGGGACCCACCCCTGCTCAAGCTC 3950
           241   P  D  C  G  F  R  A  G  G  D  P  P  L  L  K  L   256

           601 ----+----*----+----*----+----*----+----*----+----* 650
           197 T  A  P  S  E  E  A  S  V  E  K  R  P  C  C  L  L  213
mid31005  2122 ACTGCTCCCTCGGAGGAGGCGTCTGTGGAGAAGAGGCCGTGTTGCTTGCT 2171
               || || ||  ||| ||||||  | ||||||| ||||||||| ||| ||||
sj05126   3951 ACAGCCCCGGCGGTGGAGGCTCCCGTGGAGAGGAGGCCGTGCTGCCTGCT 4000
           257 T  A  P  A  V  E  A  P  V  E  R  R  P  C  C  L  L  273

           651 ----+-- 657
           214  M  *   215
mid31005  2172 CATGTGA 2178
               |||||||
sj05126   4001 CATGTGA 4007
           274  M  *   275


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
mid31005  2179 AATGTGATTCCTCAGTATGGCAGGGTTCAACCCCATGCCCAGCCGGAGGC 2228
                  |   || ||||| |||   |||  |   | |  || |||||  ||||
sj05126   4008 ..GGCTGTTGCTCAGCATGCAGGGGCCCTGTCGCGGGCACAGCCCAAGGC 4055

            51 ----+----*----+----*----+----*----+----*----+----* 100
mid31005  2229 TTCCTCACGATCTCTGGCCTGGTGACCCACTTAGCACATACCCCTGTGCT 2278
               | |||                     || |   |  | | |||  |||||
sj05126   4056 TGCCT.....................CCCCACGGTGCGTGCCCTGGTGCT 4084

           101 ----+----*----+----*----+----*----+----*----+----* 150
mid31005  2279 GTGGGGGAGCCGGCACAGAGCCCCATCCCCCTCCCAGCCCAGGACACTGG 2328
               | ||| |   | |||| ||  |||   |  ||  | |  |||||||||||
sj05126   4085 GCGGGTG...CAGCACGGAAACCCCGGCTTCT.ACTGTACAGGACACTGG 4130

           151 ----+----*----+----*----+----*----+----*----+----* 200
mid31005  2329 CCACCTTGCTCAGGGATGGACTATGCAGAGCTCTACCTATGGGCCTCAGG 2378
               || |  |       || |   |     |||   |  ||    | ||    
sj05126   4131 CCCCTCTCAGGTCAGAAGACATGCCTGGAGGGATGTCT....GGCTGCAA 4176

           201 ----+----*----+----*----+----*----+----*----+--- 248
mid31005  2379 CCACAGTCTGTTTATTGTGACTCTTGATAAAGG..CTGTTTGCCACGG 2424
                 ||  | | | |  ||  ||||||||||||||     ||||||| ||
sj05126   4177 AGACTATTTTTATCCTGCAACTCTTGATAAAGGGCTGTTTTGCCATGG 4224