Comparison of KIAA cDNA sequences between mouse and human (FLJ00392)

<<Original sequence data>>

mouse  mFLJ00392 (mid31005)     length:   2424 bp, CDS:   695 -  1534
human     (sj05126)     length:   4224 bp, CDS:  3183 -  4007

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     32 -  3394    1065      400      27.3
  CDS:   3395 -  3419      20        5      20.0
3'UTR:   3420 -  4323     652      215      24.8

amino acid

  CDS:   3395 -  3419       9        0      0.0
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mid31005     1 ...............................GGCCCGCCCCCGTGGCGCC 19
                                                 | | |||  | | || 
sj05126      1 GGGAGCGCGGGGCCCACTGACCCGCGGAAGCCAGCGGACCCACTTGTGCG 50

            51 ----+----*----+----*----+----*----+----*----+----* 100
mid31005    20 TGGAGCAGCGCCGGGCTCCAGGGTCGGCC..................... 48
                 |  | |||| |||| | |||  | | |                     
sj05126     51 GCGGTCGGCGCGGGGCGCGAGGTACTGGCACACGGATGAGGAGTCGTAGA 100

           101 ----+----*----+----*----+----*----+----*----+----* 150
mid31005    49 .................................................. 49
                                                                 
sj05126    101 AGAGGGGCCTGCAGATTGTGCTCTCAGCAAGCCTGTCGTCTAGTGGAAGA 150

           151 ----+----*----+----*----+----*----+----*----+----* 200
mid31005    49 ...............................................GGG 51
                                                               ||
sj05126    151 CACTGGCCGGGACACAGAGCCCACGTGTGGACACCGCTGTGGGTTGGTGG 200

           201 ----+----*----+----*----+----*----+----*----+----* 250
mid31005    52 CCGGGTTCAGGGAGCGGCCA..................GGGAGGTTCCAG 83
               | ||| ||  | ||  ||||                  | |   |   ||
sj05126    201 CAGGGGTCGAGCAGGTGCCATCAGGCACATGAACGGTGGAGTCTTCAAAG 250

           251 ----+----*----+----*----+----*----+----*----+----* 300
mid31005    84 GTGTGTGTGACGGCCGGAAGGGGAGGTTCCCCTG.AGAAAATATTGACAG 132
               ||||| |   | || ||||| |||||| | |||| ||| | |   | | |
sj05126    251 GTGTGAGCAGCTGCTGGAAGAGGAGGTGCTCCTGAAGACACTGCGGCCGG 300

           301 ----+----*----+----*----+----*----+----*----+----* 350
mid31005   133 AACTCCT.........GTCTCCTAGCTGCCTAGAGATTGTCACCCTTGGA 173
                 | |||         ||  ||| ||||||||||||   |||||| ||| 
sj05126    301 CCCGCCTGTGCCCTTGGTGCCCTGGCTGCCTAGAGAGCCTCACCCCTGGG 350

           351 ----+----*----+----*----+----*----+----*----+----* 400
mid31005   174 TGCTGGAAGTTGGAATCCCAGGACTGACCATACCCCCTGACCTTTGCTGC 223
                 ||||     ||| | ||||||||   |  ||  |||| |||   |   
sj05126    351 CCCTGGGGCCAGGACT.CCAGGACT...CTGACTACCTGCCCTCCCCCAG 396

           401 ----+----*----+----*----+----*----+----*----+----* 450
mid31005   224 CATAGCTTGTTAGACCTAGTTGTGCTGACTGAAAAGC............. 260
               | |     | |  ||||  | ||    |||||    |             
sj05126    397 CCTCAGCGGCTGCACCTCCTCGTTAGTACTGATGCACTGACCTCGGCACA 446

           451 ----+----*----+----*----+----*----+----*----+----* 500
mid31005   261 ...............................................CTG 263
                                                              |  
sj05126    447 CAGCTGGGAGGGGTTGGGGGCTGGGTCATGGCTGCTCCCAGGCCCCACCC 496

           501 ----+----*----+----*----+----*----+----*----+----* 550
mid31005   264 AGGGCAGCCAGCATGGAAGAGGAGCAGAGG.TTCCCAGGGGCTGCCAGGG 312
               |||      ||| | ||||  ||  |||||  || ||||||||  |||||
sj05126    497 AGGCTCCTGAGCCTAGAAGGTGAAAAGAGGACTCTCAGGGGCTCACAGGG 546

           551 ----+----*----+----*----+----*----+----*----+----* 600
mid31005   313 G..CTTGCTGCTGATTGGCCCTGCCCTCCATT.GTCCTAGGCAGGGTGCC 359
               |  ||  |||||| ||||||||||||||| ||   |||  ||||||||||
sj05126    547 GCTCTCACTGCTGGTTGGCCCTGCCCTCCCTTCCCCCTCAGCAGGGTGCC 596

           601 ----+----*----+----*----+----*----+----*----+----* 650
mid31005   360 AGGAAGCTGGAACTTTGTTATCTGGGTAATTAGCTTCAGACCCTGGACTG 409
                |||||||||||| ||||||||||||||||||| ||||||||||| ||||
sj05126    597 CGGAAGCTGGAACCTTGTTATCTGGGTAATTAGTTTCAGACCCTGCACTG 646

           651 ----+----*----+----*----+----*----+----*----+----* 700
mid31005   410 AGGCC.GCCAGGTCTTAGGGCTACTTCCCACAGGCTGTGCACCCTGACCC 458
               ||||| |||||||||  ||||| | ||||| ||| |||||||||||||||
sj05126    647 AGGCCGGCCAGGTCTCGGGGCTGCCTCCCATAGGTTGTGCACCCTGACCC 696

           701 ----+----*----+----*----+----*----+----*----+----* 750
mid31005   459 CAAGAGGGAGGCGAGGCGCTGTGTACAGAAGCCCTGCCAGCTGAACACTT 508
               | |||||||||||||||||||  |   ||        |||||  |  || 
sj05126    697 CGAGAGGGAGGCGAGGCGCTGCTTGTCGA........CAGCTAGAGGCTG 738

           751 ----+----*----+----*----+----*----+----*----+----* 800
mid31005   509 GAGGTGTCTGTCCTACCTGGGGAACGACTGCAGGCATCCCCACTTACACA 558
               |              |||||||| |   |   ||   |||          
sj05126    739 G..............CCTGGGGAGCAGGTTTGGGGTGCCC.......... 764

           801 ----+----*----+----*----+----*----+----*----+----* 850
mid31005   559 CCTTCCTCCCCACCCCATGCCACACTGCCCTGCCTGGCTGGGCTC.TGCC 607
                                | |||||||||||| |||| |  ||| | ||||
sj05126    765 .................TCCCACACTGCCCTCCCTGCCCCGGCCCATGCC 797

           851 ----+----*----+----*----+----*----+----*----+----* 900
mid31005   608 CCTTAGGGCAG.CTGGGCCTGGTTACAGTGTGGGACCTCCCATCTCAGCC 656
               ||  ||||| | |||||||||||||  ||||||| |||||   | |||||
sj05126    798 CCCCAGGGCTGCCTGGGCCTGGTTATTGTGTGGGGCCTCCTGACCCAGCC 847

           901 ----+----*----+----*----+----*----+----*----+----* 950
mid31005   657 TTGCCAGGGACAGAGGGCACCAAGTCTTAGAAAGGTGATGCCCCCAAGGG 706
                            ||||||| |||   | | |||| ||||||||| ||||
sj05126    848 ............AAGGGCACGAAGCTCTGGGAAGGGGATGCCCCCGAGGG 885

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mid31005   707 TGCCCGTCCAGCCAGCTGCCCCACCCTTCAGGCTTGTCCTGGCCCCCCAA 756
               |||| ||||||| ||||||||||||| ||||||    |||||||||| | 
sj05126    886 TGCCAGTCCAGCTAGCTGCCCCACCCCTCAGGCCCAGCCTGGCCCCCAAG 935

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mid31005   757 ACCCAGATCGTGGTGCCCCCAAACACCCCGAGGGCAGACATTCACCACCA 806
                 ||  |   ||||||||| |    ||| | |||||  ||  | || |||
sj05126    936 CTCCCCACTCTGGTGCCCCGAGCAGCCCTGTGGGCAAGCAGCCGCCGCCA 985

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mid31005   807 TGGCCGAGCACCTGGAGCTGCTGGCAGAGATGCCCATGGTAGGCAGGATG 856
               |||||||||||||||||||||||||||||||||||||||| |||||||||
sj05126    986 TGGCCGAGCACCTGGAGCTGCTGGCAGAGATGCCCATGGTGGGCAGGATG 1035

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mid31005   857 AGTACCCAGGAGCGCCTGAAGCATGCCCAGAAGCGACGTGCCCAGCAG.. 904
               || || |||||||| |||||||||||||||||||| || |||||||||  
sj05126   1036 AGCACACAGGAGCGGCTGAAGCATGCCCAGAAGCGGCGCGCCCAGCAGTG 1085

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mid31005   905 .................................................. 905
                                                                 
sj05126   1086 TTGTCCTTCTGGAGGCCGCTGCCCGAAATGACCTGGAAGAAGGTGAGTGT 1135

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mid31005   905 .................................................. 905
                                                                 
sj05126   1136 GGCTGAGCCCAGAGCAGCTCCCAGCAGACGGCCCACTCCCTGCTACCTGG 1185

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mid31005   905 .................................................. 905
                                                                 
sj05126   1186 GTGCCGTCTCATGCCAAGGCTGGGGGCTGGGCCTGTCCACAGCTCCTGGG 1235

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mid31005   905 .................................................. 905
                                                                 
sj05126   1236 CTCCAGCCCCCAGATCTTGCCTGGTCTCTTCAGGCTGGGTGGCCCAGGGT 1285

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mid31005   905 ................................GTAAAGATGTGGGCCCAG 922
                                               |    || ||| |||   
sj05126   1286 GCCCCCATCAGGCAAGCCCCAAGCAGTGGGCAGCCCTGAGGTGAGCCTGT 1335

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mid31005   923 GCTGAGAAGGAGGCTCACAGCAAGAAGGGCCATGGGGAGCGACCATGGAA 972
               || |   ||  | |   |||   |  |   ||||  ||| |  | ||   
sj05126   1336 GCGGGACAGCCGTCCTTCAGGCGGGGGCTGCATGCAGAGGGCTCCTGCTG 1385

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mid31005   973 GGAGGTG........................................... 979
                ||||||                                           
sj05126   1386 TGAGGTGAGCTGAGGCCATGAGTGGACCCCCAGGAGCCTGCAGAAAAACC 1435

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mid31005   980 .................................................. 980
                                                                 
sj05126   1436 TAGTGCGGGGCCCCACGGGAGCAGGGGTGGCCGGTAGTCATTGCTGCTTC 1485

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mid31005   980 .................................................. 980
                                                                 
sj05126   1486 TTGTTAGGCTGCTCAGGAGAGCCCTGGTCTCCACCTCCGTGAAATAGGGT 1535

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mid31005   980 .................................................. 980
                                                                 
sj05126   1536 GGGACCAGCCACCTCTGTGGGTGAGAGAGCCAGGCCCTGGGCAGGCACAG 1585

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mid31005   980 .................................................. 980
                                                                 
sj05126   1586 AGCTATGCAGGTGGCCCCCTCTCAGTGCCTGCCCTAGGCTCTGCTTGTGA 1635

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mid31005   980 .................................................. 980
                                                                 
sj05126   1636 CTCTCTTCTCCTCACCTGTGCCCCACGCTTGCAGCCCCAGCTGTGTGGGT 1685

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mid31005   980 .................................................. 980
                                                                 
sj05126   1686 TCCACTTCTGGTGCTCTGGAGTCTGGGGGGAAGAGGCACTGTGGTGGCCC 1735

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mid31005   980 .................................................. 980
                                                                 
sj05126   1736 TTGAGACTCCTTCCTGCCTCCCTCCGGAGCAGAGAGTAAAGAGGAGCCGG 1785

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mid31005   980 .................................................. 980
                                                                 
sj05126   1786 CAGTGTCTGGCCTGCATCTTTCCATGTGGACAGGAGCCCTCCCGGGAGGC 1835

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mid31005   980 .................................................. 980
                                                                 
sj05126   1836 CTGGAGGCAGAGGGAAGAGGCGGAGGGTGCCATGGTCCACAGGGAGCTGT 1885

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mid31005   980 .................................................. 980
                                                                 
sj05126   1886 GGGAAGGTGGGAGCCCTCCTGCTGCACCCCAGGCACCGTCAGGGAGAACC 1935

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mid31005   980 .................................................. 980
                                                                 
sj05126   1936 CTGGTGACCTGGGCGAGAGCTGGGCCCGAGTTGGGATCTTTGATGGGGAG 1985

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mid31005   980 .................................................. 980
                                                                 
sj05126   1986 GGGAGTGAGAGCAGGGATGTGCTCTGGTGGTGGGGAGCCTCAGGTCAGGT 2035

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mid31005   980 .................................................. 980
                                                                 
sj05126   2036 CCCAGAGGACCCAGGAGAGCTCATGAACACAGGGCTGGCAGGTTGTCAGG 2085

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mid31005   980 .................................................. 980
                                                                 
sj05126   2086 GAAGAGCCGAAGGAGCTGTGGTAGCCTCCAGGCAGGGAGCTCTTCCTGGG 2135

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mid31005   980 ............................GCTGGCCTCAGGCCTCGGAAGC 1001
                                           ||||  ||||   | | | |||
sj05126   2136 CTGGAGGGAGGTGTGGGATTGTTGGAGTGCTGCTCTCA...CACAGGAGC 2182

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mid31005  1002 ATGTCCTCTT........................................ 1011
               | | ||| ||                                        
sj05126   2183 ACGGCCTGTTCTGGGGGTCGGAGGGCTGGAGCACCACCATGAAGGGCCTG 2232

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mid31005  1012 .................................................. 1012
                                                                 
sj05126   2233 CAGGTGGGTGGAGGCAGAGGGCTTCTGGGAGTGTGACCGGCCTGGGCCAG 2282

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mid31005  1012 .................................................. 1012
                                                                 
sj05126   2283 ACAGATGCCTGGTGCTTCTGCCCCCACCCCTGGGCTCTGGTGTGCCTCCT 2332

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mid31005  1012 ...........CCCTCCCAGCGTTGCCCTTCTGGAGGCTGCTGCCCGAA. 1049
                          | ||  |  | ||| |||||    ||     | ||||| 
sj05126   2333 GCCATCGGCACCACTGTCTTCCTTGTCCTTCCCTGGGTCCTGGGCCGAAG 2382

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mid31005  1050 ..............................................ACGA 1053
                                                              | |
sj05126   2383 CACAGTTGACAGGACCTGACCAGGGGCAGGACCCTGTCCTCACCTCGCCA 2432

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mid31005  1054 CTTGGAGGAAGTCCGCCAGTTCCTTACCAGTGGGGTTAGCCCCAACCTGG 1103
               | |    | ||||||||||||||||   |||||||| |||||  || |||
sj05126   2433 CCTTTTTGCAGTCCGCCAGTTCCTTGGGAGTGGGGTCAGCCCTGACTTGG 2482

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mid31005  1104 CCAATGAAGATGGCTTGACTGCACTGCACCAGTGCTGCATTGACGACTTC 1153
               |||| || || ||| |||| || |||||||||||||||||||| || |||
sj05126   2483 CCAACGAGGACGGCCTGACGGCCCTGCACCAGTGCTGCATTGATGATTTC 2532

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mid31005  1154 CAAGAGATGGCACAGCAGCTCCTGGACGCTGGGGCTGATGTCAATGCTCG 1203
               | ||||||||  |||||||||||||| ||||||||  |  |||||||  |
sj05126   2533 CGAGAGATGGTGCAGCAGCTCCTGGAGGCTGGGGCCAACATCAATGCCTG 2582

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mid31005  1204 AGACAGTGAGTGCTGGACACCTCTGCATGCTGCAGCTACCTGTGGCCATC 1253
                ||||||||||||||||| |||||||||||||| || ||||| ||||| |
sj05126   2583 TGACAGTGAGTGCTGGACGCCTCTGCATGCTGCGGCCACCTGCGGCCACC 2632

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mid31005  1254 TGCATCTGGTGGAACTCCTTATTTCACGTGGTGCAGATCTCCTTGCAGTC 1303
               |||| |||||||| || || ||  |  |||| ||  ||||||| || |||
sj05126   2633 TGCACCTGGTGGAGCTGCTCATCGCCAGTGGCGCCAATCTCCTGGCGGTC 2682

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mid31005  1304 AATTCCGATGGGAATATGCCCTACGACCTGTGTGAGGACGCACAGACGCT 1353
               ||  |||| ||||| |||||||| ||||||||||| || |  ||||||||
sj05126   2683 AACACCGACGGGAACATGCCCTATGACCTGTGTGATGATGAGCAGACGCT 2732

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mid31005  1354 GGATTGCCTTGAGACTGCCATGGCCAACCAGGGT................ 1387
               ||| ||||| ||||||||||||||| |||  |||                
sj05126   2733 GGACTGCCTGGAGACTGCCATGGCCGACCGTGGTAGGTGCGGCGGTGCGG 2782

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mid31005  1388 .................................................. 1388
                                                                 
sj05126   2783 CTGTGGGAGGGCTGCCGGTCGCGCTCCCTCTGAGCCTGCCGCCTCGCAGG 2832

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mid31005  1388 .ATCACCCAGGAGGGCATTGAGGAGGCCCGGGCAGTGCCAGAGCTGTGCA 1436
                || ||||||||  |||| ||||  |||||||| |||||||| ||| |||
sj05126   2833 CATTACCCAGGACAGCATCGAGGCCGCCCGGGCCGTGCCAGAACTGCGCA 2882

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid31005  1437 TGCTGAATGACCTCCAGAACCGCCTGCAAGCTGGGGCCAACCTCAGTGAC 1486
               ||||| | ||| ||| || ||| ||||| || |||||  |||||  || |
sj05126   2883 TGCTGGACGACATCCGGAGCCGGCTGCAGGCCGGGGCAGACCTCCATGCC 2932

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid31005  1487 CCTTTGGATCATGGGGCTACTC............................ 1508
               ||  |||| || ||||| || |                            
sj05126   2933 CCCCTGGACCACGGGGCCACGCTGGTGAGGGCTGGGGGGGTGAGGGGCAC 2982

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid31005  1509 .................................................. 1509
                                                                 
sj05126   2983 ACGGGGCTGGGGGCCTCGCTACTTGGAGGTGGGGGATGGGGCCGAATTCA 3032

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid31005  1509 .................................................. 1509
                                                                 
sj05126   3033 GGCCGGGCGCTTGCCTGCAGCTGCACGTCGCAGCCGCCAACGGGTTCAGC 3082

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid31005  1509 .................................................. 1509
                                                                 
sj05126   3083 GAGGCGGCTCCCCTGCTGCTGGAACACCGAGCCAGCCTGAGCGCTAAGGA 3132

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid31005  1509 .................................................. 1509
                                                                 
sj05126   3133 CCAAGACGGCTGGGAGCCGCTGCACGCCCCGGCCTACTGGGGCCAGGTGA 3182

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid31005  1509 .................................................. 1509
                                                                 
sj05126   3183 GTGCGGGCGGGAGCAGGTGGGAGGGGGCTTCCAGCGCAGCAGTCTGCAGC 3232
               V  R  A  G  A  G  G  R  G  L  P  A  Q  Q  S  A  A 

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid31005  1509 .................................................. 1509
                                                                 
sj05126   3233 TCCGGCCTGCCGTCCACAGGTGCCCCTGGTGGAGCTGCTCGTGGCGCACG 3282
                P  A  C  R  P  Q  V  P  L  V  E  L  L  V  A  H  G

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
                                                           D  V  
mid31005  1509 ...........................................TGATGTA 1515
                                                          |||||| 
sj05126   3283 GGGCCGACCTGAACGCAAAGTCCCTGATGGACGAGACGCCCCTTGATGTG 3332
                 A  D  L  N  A  K  S  L  M  D  E  T  P  L  D  V  

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
               C  G  D  E  E  V  R  A  K  L  L  E  L  K  H  K  Q 
mid31005  1516 TGTGGTGATGAGGAGGTGAGAGCCAAACTGCTGGAGCTCAAGCACAAGCA 1565
               || || || ||||||||| | ||||| ||||||||||| |||||||||||
sj05126   3333 TGCGGGGACGAGGAGGTGCGGGCCAAGCTGCTGGAGCTGAAGCACAAGCA 3382
               C  G  D  E  E  V  R  A  K  L  L  E  L  K  H  K  H 

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
                D  A  L  L  R  A  Q  G  R  Q  R  S  L  L  R  R  R
mid31005  1566 AGATGCACTCCTGCGGGCCCAGGGCCGCCAGCGCTCCCTGCTGCGCCGCC 1615
                || || |||||||| |||||| |||||||||||||| ||||||||||||
sj05126   3383 CGACGCCCTCCTGCGCGCCCAGAGCCGCCAGCGCTCCTTGCTGCGCCGCC 3432
                D  A  L  L  R  A  Q  S  R  Q  R  S  L  L  R  R  R

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
                 T  S  S  A  G  S  R  G  K  V  V  R  R  V  S  L  
mid31005  1616 GTACCTCTAGTGCAGGCAGCCGTGGGAAGGTGGTGAGACGAGTGAGCCTG 1665
               | ||||| || || |||||||| |||||||||||||| || |||||||| 
sj05126   3433 GCACCTCCAGCGCCGGCAGCCGCGGGAAGGTGGTGAGGCGGGTGAGCCTA 3482
                 T  S  S  A  G  S  R  G  K  V  V  R  R  V  S  L  

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
               T  H  R  T  N  L  Y  R  K  E  H  A  Q  E  A  I  V 
mid31005  1666 ACACATCGCACCAACCTGTACCGCAAGGAGCATGCCCAAGAGGCCATTGT 1715
               || || |||||| |||||||||||||| |||| ||||| |||||||| ||
sj05126   3483 ACCCAGCGCACCGACCTGTACCGCAAGCAGCACGCCCAGGAGGCCATCGT 3532
               T  Q  R  T  D  L  Y  R  K  Q  H  A  Q  E  A  I  V 

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
                W  Q  Q  P  P  P  T  S  P  E  P  L  E  -     E  D
mid31005  1716 GTGGCAGCAGCCGCCACCCACCAGTCCAGAACCTCTAGAGG...ATGAGG 1762
               |||||| |||||||| |||||||| || || || |  ||||   | || |
sj05126   3533 GTGGCAACAGCCGCCGCCCACCAGCCCGGAGCCGCCCGAGGACAACGATG 3582
                W  Q  Q  P  P  P  T  S  P  E  P  P  E  D  N  D  D

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
                 R  Q  T  D  A  E  L  R  L  Q  P  P  E  D  D  G  
mid31005  1763 ACAGGCAGACAGACGCTGAGCTCCGGCTGCAGCCCCCGGAGGACGATGGC 1812
               || | ||||||| ||| |||||| ||| || |||||||||||| ||   |
sj05126   3583 ACCGCCAGACAGGCGCAGAGCTCAGGCCGCCGCCCCCGGAGGAGGACAAC 3632
                 R  Q  T  G  A  E  L  R  P  P  P  P  E  E  D  N  

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
               P  E  V  A  R  P  H  N  G  Q  V  G  A  P  P  G  R 
mid31005  1813 CCTGAGGTGGCCAGACCACACAATGGCCAAGTAGGGGCCCCCCCCGGGAG 1862
               || || |||| ||| || |||||||||| |||||||| | |||| | | |
sj05126   3633 CCCGAAGTGGTCAGGCCGCACAATGGCCGAGTAGGGGGCTCCCCAGTGCG 3682
               P  E  V  V  R  P  H  N  G  R  V  G  G  S  P  V  R 

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
                H  L  Y  S  K  R  L  D  R  S  V  S  Y  H  L  S  P
mid31005  1863 ACACCTGTACTCCAAGCGTCTAGATCGGAGTGTCTCCTATCATCTGAGTC 1912
                || || ||||||||||| ||||| |||||||||||||| || ||||| |
sj05126   3683 GCATCTATACTCCAAGCGACTAGACCGGAGTGTCTCCTACCAGCTGAGCC 3732
                H  L  Y  S  K  R  L  D  R  S  V  S  Y  Q  L  S  P

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
                 E  E  N  S  A  P  D  A  L  V  R  D  K  A  H  H  
mid31005  1913 CTGAGGAGAACAGTGCCCCTGATGCCCTCGTCCGGGACAAGGCCCACCAC 1962
               |   ||| | ||   ||||  |  |||| ||||  |||||||||||||||
sj05126   3733 CCCTGGACAGCACCACCCCCCACACCCTGGTCCACGACAAGGCCCACCAC 3782
                 L  D  S  T  T  P  H  T  L  V  H  D  K  A  H  H  

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
               T  L  A  E  L  K  R  Q  R  A  A  A  K  L  Q  R  P 
mid31005  1963 ACACTGGCAGAACTGAAACGCCAGCGAGCGGCTGCAAAGCTTCAGCGACC 2012
               || ||||| || ||||| ||||||||||| ||||| ||||| ||||||||
sj05126   3783 ACCCTGGCTGACCTGAAGCGCCAGCGAGCTGCTGCCAAGCTGCAGCGACC 3832
               T  L  A  D  L  K  R  Q  R  A  A  A  K  L  Q  R  P 

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
                A  P  E  G           P  E  T  F  E  P  G  L  S  V
mid31005  2013 TGCCCCTGAAGGG.........CCTGAGACTTTTGAGCCTGGCCTGTCTG 2053
                 | ||||| |||         ||||||||   ||||||||||||| |||
sj05126   3833 CCCACCTGAGGGGCCCGAGAGCCCTGAGACAGCTGAGCCTGGCCTGCCTG 3882
                P  P  E  G  P  E  S  P  E  T  A  E  P  G  L  P  G

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
                 D  A  G  T  S  Q  P  D  C  G  F  S  T  I  G  D  
mid31005  2054 TTGATGCTGGGACCTCCCAGCCTGACTGTGGCTTCAGCACAATTGGGGAC 2103
                |||  | | |||| ||||||||||||||||||||||  ||   ||||||
sj05126   3883 GTGACACGGTGACCCCCCAGCCTGACTGTGGCTTCAGGGCAGGCGGGGAC 3932
                 D  T  V  T  P  Q  P  D  C  G  F  R  A  G  G  D  

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
               P  P  L  L  K  L  T  A  P  S  E  E  A  S  V  E  K 
mid31005  2104 CCGCCCCTGCTCAAGCTCACTGCTCCCTCGGAGGAGGCGTCTGTGGAGAA 2153
               || ||||||||||||||||| || ||  ||| ||||||  | ||||||| 
sj05126   3933 CCACCCCTGCTCAAGCTCACAGCCCCGGCGGTGGAGGCTCCCGTGGAGAG 3982
               P  P  L  L  K  L  T  A  P  A  V  E  A  P  V  E  R 

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
                R  P  C  C  L  L  M  *                           
mid31005  2154 GAGGCCGTGTTGCTTGCTCATGTGAAATGTGATTCCTCAGTATGGCAGGG 2203
               ||||||||| ||| ||||||||||  | |   || ||||| |||   |||
sj05126   3983 GAGGCCGTGCTGCCTGCTCATGTG..AGGCTGTTGCTCAGCATGCAGGGG 4030
                R  P  C  C  L  L  M  *                           

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mid31005  2204 TTCAACCCCATGCCCAGCCGGAGGCTTCCTCACGATCTCTGGCCTGGTGA 2253
                 |   | |  || |||||  ||||| |||                    
sj05126   4031 CCCTGTCGCGGGCACAGCCCAAGGCTGCCT.................... 4060

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mid31005  2254 CCCACTTAGCACATACCCCTGTGCTGTGGGGGAGCCGGCACAGAGCCCCA 2303
                || |   |  | | |||  |||||| ||| |   | |||| ||  ||| 
sj05126   4061 .CCCCACGGTGCGTGCCCTGGTGCTGCGGGTG...CAGCACGGAAACCCC 4106

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mid31005  2304 TCCCCCTCCCAGCCCAGGACACTGGCCACCTTGCTCAGGGATGGACTATG 2353
                 |  ||  | |  ||||||||||||| |  |       || |   |   
sj05126   4107 GGCTTCT.ACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCC 4155

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mid31005  2354 CAGAGCTCTACCTATGGGCCTCAGGCCACAGTCTGTTTATTGTGACTCTT 2403
                 |||   |  ||    | ||      ||  | | | |  ||  ||||||
sj05126   4156 TGGAGGGATGTCT....GGCTGCAAAGACTATTTTTATCCTGCAACTCTT 4201

          4301 ----+----*----+----*--- 4323
mid31005  2404 GATAAAGG..CTGTTTGCCACGG 2424
               ||||||||     ||||||| ||
sj05126   4202 GATAAAGGGCTGTTTTGCCATGG 4224