FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4159.ptfa, 511 aa vs ./tmplib.26680 library 1768506 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.7409+/-0.00465; mu= 15.9921+/- 0.311 mean_var=94.8442+/-21.915, 0's: 0 Z-trim: 8 B-trim: 56 in 1/35 Lambda= 0.1317 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1884 ( 1806 res) mib34059 (1806) 198 48 5.1e-06 mKIAA1894 ( 2796 res) mbf00006 (2796) 190 47 1.9e-05 mKIAA4158 ( 761 res) mfj68139 ( 761) 173 43 8e-05 mKIAA4226 ( 2225 res) mpf00382 (2225) 174 44 0.00014 mKIAA0927 ( 713 res) mbg08305 ( 713) 166 42 0.00019 mKIAA1983 ( 426 res) mbp99003 ( 426) 154 39 0.00068 mFLJ00070 ( 1167 res) mbg01449 (1167) 142 38 0.0062 >>mKIAA1884 ( 1806 res) mib34059 (1806 aa) initn: 546 init1: 187 opt: 198 Z-score: 200.4 bits: 48.5 E(): 5.1e-06 Smith-Waterman score: 499; 27.619% identity (35.913% ungapped) in 420 aa overlap (179-510:732-1142) 150 160 170 180 190 200 mKIAA4 VNGVKPSIGQRTRLSKGDIAQARKLYKCPACGETLQDSTGNFSSPEYPNGYSAHMHCVWR :: .: . :.. :: .:. : ..:::. mKIAA1 ALQGSPEIECLPVPGALAQWNVSAPTCVVPCGGNLTERRGTILSPGFPEPYLNSLNCVWK 710 720 730 740 750 760 210 220 230 240 250 260 mKIAA4 ISVTPGEKIILNFTSMDLYRSRLCWYDYVEVRDGFWRKAPLRGRFCGGKLPEPIVSTDSR : : : : .. : . .. : : .:: :: . . : : : .: . ::... mKIAA1 IMVPEGAGIQIQVIS---FVTEQNW-DSLEVFDGADNTVTMLGSFSGTTVPALLNSTSNQ 770 780 790 800 810 270 280 290 mKIAA4 LWVEFRSSSNWVGKGFFAVYEAI------------------------------------- :...: :. . . :: :... mKIAA1 LYLHFYSDISVSAAGFHLEYKTVGLSSCPEPAVPSNGVKTGERYLVNDVVSFQCEPGYAL 820 830 840 850 860 870 300 310 320 mKIAA4 --------------------------CGGDVKKDNGHIQSPNYPDDYRPSKV-CIWRIQV ::: :.. .: : ::..: .: ::.. : :.:.. mKIAA1 QGHAHISCMPGTVRRWNYPPPLCIAQCGGAVEEMEGVILSPGFPGNY-PSNMDCSWKISL 880 890 900 910 920 930 330 340 350 360 370 380 mKIAA4 SEGFHVGLTFQSFEIERHDSCAYDYLEVRDGHSESSNLIGRYCGYEKPDDIKSTSSRLWL :: . . : .: : . .:.::.:.: ::.: ..::. : : : .. ::: . mKIAA1 PVGFGAHIQFLNFSTEPN----HDFLEIRSGPSETSRMMGRFSGSELPGSLLSTSHDSIV 940 950 960 970 980 990 390 400 410 420 430 mKIAA4 KFVSDGSINKAGFAVNFFK-EVDECSRPN---RGGCEQRCLNTLGSYKCSCDPGYELA-- : :: : :. :: ... :..:: :. : . :. : : :::.:. mKIAA1 YFHSDHSQNRPGFKLEYQAYELQECPDPEPFANGIVRGAGYNVGQSVTFECLPGYQLTGQ 1000 1010 1020 1030 1040 1050 440 450 460 470 480 mKIAA4 P-------DKR-------RCEAACGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQY : .: :::. ::: .:..::.. :::.:. : ...:.::...: . mKIAA1 PVLTCQHGTNRNWDHPLPRCEVPCGGNITSFNGTVYSPGYPSPYSSSQDCVWQITVPIGH 1060 1070 1080 1090 1100 1110 490 500 510 mKIAA4 RISLQFDFFETEG-NDGVS---SPERGSLQS . :...... : .: .. .:.. ::: mKIAA1 GVHLNLSLLQIEPFGDYITVWDGPQQTSLQLGVFTRSLSKKIAHSSSNQVLLKFHRDTAT 1120 1130 1140 1150 1160 1170 >>mKIAA1894 ( 2796 res) mbf00006 (2796 aa) initn: 332 init1: 190 opt: 190 Z-score: 190.0 bits: 47.2 E(): 1.9e-05 Smith-Waterman score: 504; 29.047% identity (37.006% ungapped) in 451 aa overlap (132-496:981-1420) 110 120 130 140 150 160 mKIAA4 QEYNFLKMEVQEVESLGETYDFDSIMHYARNTFSRG-IFLDTIVPKYEVNGVKPSIGQRT : :. : . : : : ..: . . : mKIAA1 IAVPKEFAVPRTSSTQCSSVPEPRFGRRIGNDFAVGSLVLFECNPGYILHGSR---AIRC 960 970 980 990 1000 170 180 190 200 210 mKIAA4 RLSKGDIAQ-ARKLYKCPA-CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKII . ...:: .: : . :: : :.. :: ::. :. ...:::.:.: : : mKIAA1 ETVPNSLAQWNDSLPTCIVPCGGILTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQ 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 mKIAA4 LNFTSMDLYRSRLCWYDYVEVRDGFWRKAPLRGRFCGGKLPEPIVSTDSRLWVEFRSSSN .. .: . .. : : .. :: .:: : . : .:. . ::.. :...:.:. . mKIAA1 VQVVS---FATEHNW-DSLDFYDGGDNNAPRLGSYSGTTIPHLLNSTSNNLYLNFQSDIS 1070 1080 1090 1100 1110 1120 280 290 mKIAA4 WVGKGFFAVYEAI----------------------------------------------- . :: : :: mKIAA1 VSAAGFHLEYTAIGLDSCPEPQTPSSGIKVGDRYMVGDVVSFQCDQGYSLQGHSHITCMP 1130 1140 1150 1160 1170 1180 300 310 320 330 mKIAA4 ----------------CGGDVKKDNGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQ ::: .. .: : ::..: .: : : : :.. :: : : : mKIAA1 GPVRRWNYPIPICLAQCGGAMSDFSGVILSPGFPGNYPSSLDCTWTIKLPIGFGVHLQFV 1190 1200 1210 1220 1230 1240 340 350 360 370 380 390 mKIAA4 SFEIERHDSCAYDYLEVRDGHSESSNLIGRYCGYEKPDDIKSTSSRLWLKFVSDGSINKA .: : .::::::.: :: :..::: : . :... ::. . : : :: : :: mKIAA1 NFSTET----IHDYLEVRSGSSEISTVIGRLSGPQIPSSLFSTTHETSLYFHSDYSQNKQ 1250 1260 1270 1280 1290 400 410 420 430 440 mKIAA4 GFAVNF-FKEVDECS--RPNRGGCEQRCLNTLG-SYKCSCDPGYELAPDKR--------- :: . . ... : :: :.: :.: . . : ::: : .. mKIAA1 GFHIVYQAYQLQSCPDPRPFRNGFVIGNDFTVGQTISFECFPGYTLIGNSALTCLHGVSR 1300 1310 1320 1330 1340 1350 450 460 470 480 490 mKIAA4 -------RCEAACGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFET :::: ::: .: .::.: :::.: ::: ..:.: . .: : ..: ..: mKIAA1 NWNHPLPRCEALCGGNITAMNGTIYSPGYPDEYPNFQDCFWLVRVPPGNGIYINFTVLQT 1360 1370 1380 1390 1400 1410 500 510 mKIAA4 EGNDGVSSPERGSLQS : mKIAA1 EPIYDFITVWDGPDQNSPQIGQFSGNTALESVYSTSNQILIKFHSDFTTSGFFVLSYHAY 1420 1430 1440 1450 1460 1470 >>mKIAA4158 ( 761 res) mfj68139 (761 aa) initn: 264 init1: 92 opt: 173 Z-score: 178.9 bits: 43.3 E(): 8e-05 Smith-Waterman score: 270; 25.847% identity (29.756% ungapped) in 236 aa overlap (290-499:181-411) 260 270 280 290 300 310 mKIAA4 EPIVSTDSRLWVEFRSSSNWVGKGFFAVYEAICGGDVKK-DNGHIQSPNYPDDYRPSKVC : ::: ... .:.: ::..: .: . .: mKIAA4 ATGYQLKGARFLTCLNATQPFWDSQEPVCIAACGGVIRNATTGRIVSPGFPGNYSNNLTC 160 170 180 190 200 210 320 330 340 350 360 370 mKIAA4 IWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLEVRDGHS-ESSNLIGRY-CGYEKPDDIK : ... :. .. : :.. . . : : : .:.:.. :. . : : . . mKIAA4 HWLLEAPESQRLHLHFEKVSLAEDD----DRLIIRNGNNVEAPPVYDSYEVEYLPIEGLL 220 230 240 250 260 380 390 400 410 420 430 mKIAA4 STSSRLWLKFVSDGSINKAGFAVNF--FKEVDECSRP--NRGGCEQRCLN-TLGS-YKCS :.. .....: .:.: ::.:. . :.. .: .: . :. . . .:. . : mKIAA4 SSGRHFFVEFSTDSSGAAAGMALRYEAFQQ-GHCYEPFVKYGNFSSSAPSYPVGTTVEFS 270 280 290 300 310 320 440 450 460 470 mKIAA4 CDPGYELA-------------PD----KRRCEAACGGFLTKLNGSITSPGWPKEYPPNKN ::::: : :. . :.:.:.: .: : . ::.::. : ... mKIAA4 CDPGYTLEQGSIIIECVDLHDPQWNETEPACRAVCSGEITDSAGVVLSPNWPEPYGRGQD 330 340 350 360 370 380 480 490 500 510 mKIAA4 CIWQLVAPTQYRISLQFDFFETEGNDGVSSPERGSLQS ::: . . . :: :.. .. ..: mKIAA4 CIWGVHVEEDKRIMLDIRVLRIGSGDVLTFYDGDDLTARVLGQYSGPRGHFKLFTSMADV 390 400 410 420 430 440 >>mKIAA4226 ( 2225 res) mpf00382 (2225 aa) initn: 468 init1: 155 opt: 174 Z-score: 174.7 bits: 44.0 E(): 0.00014 Smith-Waterman score: 174; 53.659% identity (55.000% ungapped) in 41 aa overlap (404-444:553-592) 380 390 400 410 420 430 mKIAA4 DIKSTSSRLWLKFVSDGSINKAGFAVNFFKEVDECSRPNRGGCEQRCLNTLGSYKCSCDP ..::: : :::. .: :. :::.:::. mKIAA4 RNGKCVNMIGTYQCSCNPGYQATPDRQGCTDIDECMIMN-GGCDTQCTNSEGSYECSCSE 530 540 550 560 570 580 440 450 460 470 480 490 mKIAA4 GYELAPDKRRCEAACGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFF :: : :: : : mKIAA4 GYALMPDGRSCADIDECENNPDICDGGQCTNIPGEYRCLCYDGFMASMDMKTCIDVNECD 590 600 610 620 630 640 >>mKIAA0927 ( 713 res) mbg08305 (713 aa) initn: 303 init1: 149 opt: 166 Z-score: 172.1 bits: 41.9 E(): 0.00019 Smith-Waterman score: 292; 26.000% identity (29.817% ungapped) in 250 aa overlap (275-499:191-433) 250 260 270 280 290 300 mKIAA4 RKAPLRGRFCGGKLPEPIVSTDSRLWVEFRSSSNWVGKGFFAVYEAICGGDVKKDN-GHI :. .: .. : : ::: :.. . :.. mKIAA0 MDLHSGGVAHFHCHLGYELQGAKTLTCINASKPHWSSQE--PVCSAPCGGAVHNATIGRV 170 180 190 200 210 310 320 330 340 350 360 mKIAA4 QSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLEVRDGHSESSNLI ::..: :..:.: :.. :: .. : .. . . :.. : . : .:....: :. mKIAA0 LSPSFPGTANGSQLCVWTIEAPEGQKLHLHLERLLL--HEK---DRMIVYSGRTNTSALL 220 230 240 250 260 270 370 380 390 400 410 mKIAA4 GRYCGYEK-P-DDIKSTSSRLWLKFVSDGSINKAGFAVNFFK-EVDECSRP---NRGGCE :. : . . : .: . ..:.:: . ..: . : : .: .: : . mKIAA0 YDSLRTESVPFEGLLSEGSSIRIEFTSDQGQAASAFNIRFEAFEKGHCYEPYIQNGNFTT 280 290 300 310 320 330 420 430 440 450 mKIAA4 QRCLNTLGSY-KCSCDPGYEL--AP--------------DKRR-CEAACGGFLTKLNGSI . ..:. . .::::. : .: : . :.: ::: :. . : . mKIAA0 SDPTYNIGTIVEFTCDPGHSLEQGPAVIECVNVRDPYWNDTEPLCRAMCGGELSAVAGVV 340 350 360 370 380 390 460 470 480 490 500 510 mKIAA4 TSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDGVSSPERGSLQS ::.::. : ...:.:.. . . :: :...:.. ..: mKIAA0 LSPNWPEPYAEGEDCVWKIHVGEEKRIFLDIQFLNLSNSDILTIYDGDEVVPHVLGQYFG 400 410 420 430 440 450 mKIAA0 HSSPQKLYSSTPDLTIQFHSDPAGLIFGKGQGFIMNYIEVSRNDSCSDLPEIQNGWKTTS 460 470 480 490 500 510 >>mKIAA1983 ( 426 res) mbp99003 (426 aa) initn: 230 init1: 148 opt: 154 Z-score: 162.2 bits: 39.3 E(): 0.00068 Smith-Waterman score: 154; 46.341% identity (46.341% ungapped) in 41 aa overlap (404-444:153-193) 380 390 400 410 420 430 mKIAA4 DIKSTSSRLWLKFVSDGSINKAGFAVNFFKEVDECSRPNRGGCEQRCLNTLGSYKCSCDP ..:::. : : . :.::.:::.: : mKIAA1 DNFGRVLCTCYPGYRYDRERHQKRERPYCLDIDECATSNTTLCAHICINTMGSYHCECRE 130 140 150 160 170 180 440 450 460 470 480 490 mKIAA4 GYELAPDKRRCEAACGGFLTKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFF :: : : : : mKIAA1 GYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTCCATCKEFSQMKQTVLQLKQKMALL 190 200 210 220 230 240 >>mFLJ00070 ( 1167 res) mbg01449 (1167 aa) initn: 403 init1: 119 opt: 142 Z-score: 145.0 bits: 37.6 E(): 0.0062 Smith-Waterman score: 165; 31.304% identity (36.000% ungapped) in 115 aa overlap (403-510:613-719) 380 390 400 410 420 430 mKIAA4 DDIKSTSSRLWLKFVSDGSINKAGFAVNFFKEVDECSRPNRGGC-EQRCLNTLGSYKC-S ...::: :. : . .: : ::.:: . mFLJ00 DGGFCINFPGHYKCNCYPGYRLKASRPPICEDIDECRDPST--CPDGKCENKPGSFKCIA 590 600 610 620 630 640 440 450 460 470 480 mKIAA4 CDPGYELAPDKRRCEAACGGFLTKLNGSITSPGWPKEYPPNKNCI-WQLVAPTQYRISLQ :.::: . . .:: .:. :::: .. : . : : :.: .: mFLJ00 CQPGY-----RSQGGGACRDVNECSEGTPCSPGWCENLPGSYRCTCAQGYEPAQDGLSC- 650 660 670 680 690 490 500 510 mKIAA4 FDFFETEGN----DGVSSPERGSLQS .: : :.. ::. . ::.: mFLJ00 IDVDECEAGKVCQDGICTNTPGSFQCQCLSGYHLSRDRSRCEDIDECDFPAACIGGDCIN 700 710 720 730 740 750 511 residues in 1 query sequences 1768506 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:03:42 2006 done: Mon Mar 27 11:03:43 2006 Scan time: 0.700 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]