Comparison of KIAA cDNA sequences between mouse and human (FLJ00283)

<< Original sequence data >>

mouse  mFLJ00283 (mid24030)     length:   2659 bp
human     (sh02088)     length:   5245 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :     1090       841      249      22.84
  Total:     1090       841      249      22.84

  3'UTR:      197       112       85      43.15

amino acid

  CDS1 :      364       260      104      28.57
  Total:      364       260      104      28.57
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse   786 -  1880      3 -  1880    262 -   626
         human  3966 -  5057   3915 -  5057     18 -   381
  3'UTR: mouse  1881 -  2659
         human  5058 -  5245
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
           262 S  P  E  S  S  P  M  V  L  K  K  A  F  Q  A  T  L  278
mid24030   786 AGCCCAGAGTCCAGCCCCATGGTCCTAAAGAAGGCCTTCCAGGCCACACT 835
               ||||||   |     | |  ||| || |||||||||||||||||||| ||
sh02088   3966 AGCCCACCCTATCTGCTCCAGGTTCTGAAGAAGGCCTTCCAGGCCACGCT 4015
            18 S  P  P  Y  L  L  Q  V  L  K  K  A  F  Q  A  T  L  34

            51 ----+----*----+----*----+----*----+----*----+----* 100
           279  R  W  L  Q  N  P  H  K  T  P  S  S  S  D  L  S  S 295
mid24030   836 CAGATGGCTCCAGAACCCACACAAGACCCCCAGCAGCTCTGATCTCAGCT 885
               ||| ||||||| || | ||| |||||||||| || ||||||||||| || 
sh02088   4016 CAGGTGGCTCCTGAGCTCACCCAAGACCCCCGGCTGCTCTGATCTCGGCC 4065
            35  R  W  L  L  S  S  P  K  T  P  G  C  S  D  L  G  P 51

           101 ----+----*----+----*----+----*----+----*----+----* 150
           296   D  A  L  L  F  L  G  E  L  F  P  I  L  Q  K  R   311
mid24030   886 CCGACGCCCTGCTGTTTCTCGGAGAGCTGTTCCCCATACTACAGAAGCGC 935
               ||  |  || || ||| ||| |||||||||||||  | || ||||| |||
sh02088   4066 CCCTCATCCCGCAGTTCCTCAGAGAGCTGTTCCCTGTGCTGCAGAAACGC 4115
            52   L  I  P  Q  F  L  R  E  L  F  P  V  L  Q  K  R   67

           151 ----+----*----+----*----+----*----+----*----+----* 200
           312 L  C  S  P  C  W  E  V  R  D  S  A  L  E  F  L  T  328
mid24030   936 CTATGCAGCCCATGTTGGGAGGTGAGGGACTCTGCCCTGGAGTTCCTGAC 985
               || |||  ||| || ||||||||||||||||| ||||| |||||||||||
sh02088   4116 CTGTGCCACCCCTGCTGGGAGGTGAGGGACTCCGCCCTCGAGTTCCTGAC 4165
            68 L  C  H  P  C  W  E  V  R  D  S  A  L  E  F  L  T  84

           201 ----+----*----+----*----+----*----+----*----+----* 250
           329  H  L  I  R  H  W  G  G  Q  A  D  F  R  E  A  L  R 345
mid24030   986 GCATCTGATCCGACACTGGGGAGGGCAGGCTGACTTCAGAGAGGCACTGC 1035
                || |||| | | ||||||||||| |||||||||||||||   |||||  
sh02088   4166 CCAGCTGAGCAGGCACTGGGGAGGACAGGCTGACTTCAGATGCGCACTCT 4215
            85  Q  L  S  R  H  W  G  G  Q  A  D  F  R  C  A  L  L 101

           251 ----+----*----+----*----+----*----+----*----+----* 300
           346   S  S  E  V  P  T  L  A  L  Q  L  L  Q  D  P  E   361
mid24030  1036 GTTCCTCAGAAGTACCCACACTTGCCCTCCAGCTTCTCCAAGACCCAGAG 1085
                  | ||||| || ||    || ||||| ||||| ||||| ||||| |||
sh02088   4216 TGGCTTCAGAGGTGCCTCAGCTGGCCCTGCAGCTCCTCCAGGACCCTGAG 4265
           102   A  S  E  V  P  Q  L  A  L  Q  L  L  Q  D  P  E   117

           301 ----+----*----+----*----+----*----+----*----+----* 350
           362 S  Y  V  R  A  S  A  V  G  A  A  G  Q  L  S  S  Q  378
mid24030  1086 AGTTACGTCCGAGCAAGTGCCGTGGGTGCCGCTGGGCAGCTCTCCAGCCA 1135
               ||||| |||||||| ||||| |||   |||   |||||||| ||||||||
sh02088   4266 AGTTATGTCCGAGCGAGTGCAGTGACCGCCATGGGGCAGCTGTCCAGCCA 4315
           118 S  Y  V  R  A  S  A  V  T  A  M  G  Q  L  S  S  Q  134

           351 ----+----*----+----*----+----*----+----*----+----* 400
           379  G  L  Q  A  A  P  A  S  P  E  N  S  Q  A  Q  Q  G 395
mid24030  1136 GGGTCTGCAGGCCGCTCCCGCTAGCCCCGAGAACTCGCAGGCCCAACAGG 1185
               ||| ||||| |||   ||| | ||||| ||| |  |  ||||||  ||| 
sh02088   4316 GGGCCTGCACGCC...CCCACCAGCCCTGAGCATGCAGAGGCCCGGCAGA 4362
           135  G  L  H  A  .  P  T  S  P  E  H  A  E  A  R  Q  S 150

           401 ----+----*----+----*----+----*----+----*----+----* 450
           396   L  L  M  D  L  M  H  I  L  S  T  D  S  E  G  F   411
mid24030  1186 GCCTACTCATGGACCTTATGCATATCCTGTCCACTGACTCAGAGGGCTTC 1235
               ||||  || |||| ||  |||| ||||| |||   ||||| |||||||||
sh02088   4363 GCCTGTTCCTGGAGCTCCTGCACATCCTCTCCGTAGACTCGGAGGGCTTC 4412
           151   L  F  L  E  L  L  H  I  L  S  V  D  S  E  G  F   166

           451 ----+----*----+----*----+----*----+----*----+----* 500
           412 P  R  R  A  V  L  R  V  F  T  D  W  L  R  D  G  H  428
mid24030  1236 CCTCGAAGGGCTGTGTTACGGGTCTTCACGGACTGGCTGAGGGATGGCCA 1285
               || ||  |||| ||  | |  |||||||| || |||||| |||| |||||
sh02088   4413 CCACGGCGGGCGGTCATGCAAGTCTTCACTGAGTGGCTGCGGGACGGCCA 4462
           167 P  R  R  A  V  M  Q  V  F  T  E  W  L  R  D  G  H  183

           501 ----+----*----+----*----+----*----+----*----+----* 550
           429  A  D  V  V  R  D  T  E  W  F  V  A  T  V  L  Q  A 445
mid24030  1286 TGCTGACGTGGTTCGAGACACGGAGTGGTTCGTGGCCACTGTTCTCCAGG 1335
                || |||| ||  |  |||||||||  ||||||||||||||| || ||||
sh02088   4463 CGCCGACGCGGCCCAGGACACGGAGCAGTTCGTGGCCACTGTGCTGCAGG 4512
           184  A  D  A  A  Q  D  T  E  Q  F  V  A  T  V  L  Q  A 200

           551 ----+----*----+----*----+----*----+----*----+----* 600
           446   V  S  R  D  L  D  W  E  V  R  V  Q  G  L  E  L   461
mid24030  1336 CAGTGAGCCGGGATCTGGACTGGGAGGTCCGAGTGCAGGGTTTGGAGCTG 1385
               | | ||||| ||| ||||||||||||||||| |  |||||  ||||||||
sh02088   4513 CGGCGAGCCAGGACCTGGACTGGGAGGTCCGCGCCCAGGGCCTGGAGCTG 4562
           201   A  S  Q  D  L  D  W  E  V  R  A  Q  G  L  E  L   216

           601 ----+----*----+----*----+----*----+----*----+----* 650
           462 A  R  V  F  L  T  Q  A  L  G  Q  P  S  L  H  C  P  478
mid24030  1386 GCACGGGTGTTCCTCACCCAGGCACTGGGCCAGCCCAGCCTCCACTGTCC 1435
               || |  ||||||||   |||| |  |||| | |||  |   |||||| ||
sh02088   4563 GCCCTCGTGTTCCTGGGCCAGACTTTGGGGCCGCCGCGTACCCACTGCCC 4612
           217 A  L  V  F  L  G  Q  T  L  G  P  P  R  T  H  C  P  233

           651 ----+----*----+----*----+----*----+----*----+----* 700
           479  Y  T  V  G  L  P  R  A  S  S  P  R  P  H  P  E  F 495
mid24030  1436 CTATACAGTGGGCCTGCCCAGGGCCTCCTCTCCCCGCCCACACCCGGAAT 1485
               |||| | |||| ||| |||  ||   || |  |||  |||| | | ||  
sh02088   4613 CTATGCCGTGGCCCTACCCGAGGTGGCCCCAGCCCAGCCACTCACCGAGG 4662
           234  Y  A  V  A  L  P  E  V  A  P  A  Q  P  L  T  E  A 250

           701 ----+----*----+----*----+----*----+----*----+----* 750
           496   L  Q  T  L  C  R  L  P  L  F  E  F  A  F  C  A   511
mid24030  1486 TCTTGCAGACTCTCTGCCGTCTGCCGCTCTTTGAGTTTGCCTTTTGTGCC 1535
                  ||  | |||||||||   ||  ||||||||| || ||||||||||||
sh02088   4663 CACTGAGGGCTCTCTGCCACGTGGGGCTCTTTGACTTCGCCTTTTGTGCC 4712
           251   L  R  A  L  C  H  V  G  L  F  D  F  A  F  C  A   266

           751 ----+----*----+----*----+----*----+----*----+----* 800
           512 L  L  D  C  D  R  P  V  A  Q  K  A  C  D  L  L  L  528
mid24030  1536 TTGCTTGACTGTGACCGACCGGTGGCCCAAAAGGCCTGTGACCTGCTCCT 1585
               ||| ||||||| ||||| || ||||| || ||| | |||||||| || ||
sh02088   4713 TTGTTTGACTGCGACCGCCCTGTGGCGCAGAAGTCTTGTGACCTCCTTCT 4762
           267 L  F  D  C  D  R  P  V  A  Q  K  S  C  D  L  L  L  283

           801 ----+----*----+----*----+----*----+----*----+----* 850
           529  F  L  R  D  K  T  V  P  C  S  S  P  R  E  A  G  D 545
mid24030  1586 CTTCTTGAGGGACAAGACAGTTCCCTGCAGTAGCCCTCGGGAGGCAGGGG 1635
               |||| ||||||||||||  | | ||| ||| ||||  ||||||||  |||
sh02088   4763 CTTCCTGAGGGACAAGATTGCTTCCTACAGCAGCCTGCGGGAGGCCAGGG 4812
           284  F  L  R  D  K  I  A  S  Y  S  S  L  R  E  A  R  G 300

           851 ----+----*----+----*----+----*----+----*----+----* 900
           546   S  P  N  S  A  S  V  E  A  A  L  Q  R  W  R  E   561
mid24030  1636 ACAGCCCCAACTCAGCCTCAGTGGAGGCTGCCCTGCAGAGGTGGCGGGAA 1685
                |||||||||| | ||||| |  |||||  |||||| |||||||||||  
sh02088   4813 GCAGCCCCAACACTGCCTCCGCAGAGGCCACCCTGCCGAGGTGGCGGGCG 4862
           301   S  P  N  T  A  S  A  E  A  T  L  P  R  W  R  A   316

           901 ----+----*----+----*----+----*----+----*----+----* 950
           562 G  E  Q  A  Q  P  L  G  D  L  D  P  E  A  M  L  A  578
mid24030  1686 GGAGAGCAGGCCCAGCCCCTAGGGGACCTGGATCCTGAGGCCATGCTAGC 1735
               || |||||||||||||||| |||||||| ||| ||||||||  |||| ||
sh02088   4863 GGTGAGCAGGCCCAGCCCCCAGGGGACCAGGAGCCTGAGGCTGTGCTGGC 4912
           317 G  E  Q  A  Q  P  P  G  D  Q  E  P  E  A  V  L  A  333

           951 ----+----*----+----*----+----*----+----*----+----* 1000
           579  I  L  R  A  L  D  L  E  G  L  Q  G  R  L  A  K  S 595
mid24030  1736 CATCCTCAGGGCCTTAGACCTGGAGGGCCTGCAGGGCAGGCTGGCCAAGA 1785
               ||| |||||| || || ||||||||||||||| | ||| ||||||| |||
sh02088   4913 CATGCTCAGGTCCCTAAACCTGGAGGGCCTGCGGAGCACGCTGGCCGAGA 4962
           334  M  L  R  S  L  N  L  E  G  L  R  S  T  L  A  E  S 350

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
           596   S  D  H  V  E  K  S  P  Q  S  L  L  Q  D  M  L   611
mid24030  1786 GCAGCGACCATGTGGAGAAGAGCCCACAGTCCCTGCTGCAGGACATGCTG 1835
               |||||||||| ||||||||||| || |||||||| |||||||||||||||
sh02088   4963 GCAGCGACCACGTGGAGAAGAGTCCCCAGTCCCTCCTGCAGGACATGCTG 5012
           351   S  D  H  V  E  K  S  P  Q  S  L  L  Q  D  M  L   366

          1051 ----+----*----+----*----+----*----+----*----+ 1095
           612 A  T  V  G  V  L  E  E  N  E  A  D  C  Y  *   626
mid24030  1836 GCCACGGTGGGTGTGTTGGAGGAGAACGAAGCTGACTGCTACTAA 1880
               |||||||  ||  |  || ||| | |||| || |||||||||| |
sh02088   5013 GCCACGGGAGGCTTCCTGCAGGGGGACGAGGCCGACTGCTACTGA 5057
           367 A  T  G  G  F  L  Q  G  D  E  A  D  C  Y  *   381


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
mid24030  1881 GGCGTGTCCACGTCCTGTCCCTGTTTCCATCCTGTGCCAGCAGGAGGACC 1930
                                                         | || |||
sh02088   5058 ..........................................GCAGAACC 5065

            51 ----+----*----+----*----+----*----+----*----+----* 100
mid24030  1931 CCAGCCCAGGTCAGCAGCTCAAGAGACCCTGCAGGGGGTGGATCACATGT 1980
                 |  |     | |  |||||                             
sh02088   5066 AGACTCTGCCACTGGGGCTCA............................. 5086

           101 ----+----*----+----*----+----*----+----*----+----* 150
mid24030  1981 TTTAAGCCGGGTACGATAACACACCTATGATCACAGCGTTTAAAAGACCA 2030
                                                            |||||
sh02088   5087 ............................................GGACCA 5092

           151 ----+----*----+----*----+----*----+----*----+----* 200
mid24030  2031 AGGGAGGAGAATGTAGAGTTCCCGGCCAGCCTGGACTAGATAGCAACCCT 2080
               |||||||                                           
sh02088   5093 AGGGAGG........................................... 5099

           201 ----+----*----+----*----+----*----+----*----+----* 250
mid24030  2081 GTCTCAAGAAAACCCAAGAAATCAAATCAAAACAAAATCTCCACCCTTTG 2130
                                             | ||  || |||  |  | |
sh02088   5100 .............................CAGCACCATGTCCTTCTGTGG 5120

           251 ----+----*----+----*----+----*----+----*----+----* 300
mid24030  2131 TGTGCTGTGCATGCAGACCGGAGGCCAGCCTCCAGTGTTCTTCCTCAGGT 2180
                   |||                 |||||| |  |  | |          
sh02088   5121 GACACTG.................CCAGCCCCAGGGCTCC.......... 5143

           301 ----+----*----+----*----+----*----+----*----+----* 350
mid24030  2181 GCTGTCCACCTTGGTTTTTGAGAAAAGGTCTCTCACTAGGACTTGGTACT 2230
                                                                 
sh02088   5144 .................................................. 5144

           351 ----+----*----+----*----+----*----+----*----+----* 400
mid24030  2231 CCCTGATGAGGCTTGCCAGTGAGCTCCAGGGATCCCGCCACCACCTCCTC 2280
                       || |  ||| |   | |||   |     ||||  |||     
sh02088   5144 ........AGCCCAGCCCGGTGGATCCTCTGGGGAAGCCAGGACCAGGAG 5185

           401 ----+----*----+----*----+----*----+----*----+----* 450
mid24030  2281 AGCACCGGGATCATAATACTGTATCCCTGTGCCTGGGTCTACATACATGG 2330
               || | |  | |||  | |                                
sh02088   5186 AGAAGCAAGGTCAAGAAA................................ 5203

           451 ----+----*----+----*----+----*----+----*----+----* 500
mid24030  2331 GTGCTGGGATTTGAACTCAGGTCCTCATGCTTGCACGGCAAGCACTTTAC 2380
                                                                 
sh02088   5204 .................................................. 5204

           501 ----+----*----+----*----+----*----+----*----+----* 550
mid24030  2381 CCACTGAACCATCTCCCCAGGTCCCACAGAATCCTACTTTCCACGTGTTA 2430
                                    ||||||||  |            |   ||
sh02088   5204 .....................TCCCACAGTTT............GATGTA 5220

           551 ----+----*----+----*----+----*----+----*----+----* 600
mid24030  2431 TTAAAGAGGTGGCTTGTTTTCTGCTCAGAACAGGTAGTACTGATGTCTAT 2480
               |||||||  || ||| ||                                
sh02088   5221 TTAAAGAAATGACTTATT................................ 5238

           601 ----+----*----+----*----+----*----+----*----+----* 650
mid24030  2481 AACCTTCAATTGTGTATGTGGATTAACAAAGCCCCACTGTGATCTGCATA 2530
                                                                 
sh02088   5239 .................................................. 5239

           651 ----+----*----+----*----+----*----+----*----+----* 700
mid24030  2531 TGGCCTTCAGCTCTCTGCTCCGTCACCCAACGTTTGAAAGTCCCATAATC 2580
                            ||| |||                              
sh02088   5239 .............TCTACTC.............................. 5245

           701 ----+----*----+----*----+----*----+----*----+----* 750
mid24030  2581 TTTAAAGAATTCAGATACATTAAAAGTTAAAAGTCACAACTGTGGGTCCT 2630
                                                                 
sh02088   5245 .................................................. 5245

           751 ----+----*----+----*----+---- 779
mid24030  2631 GTAAAATAAAATAAAAAAAAATTTTTTTT 2659
                                            
sh02088   5245 ............................. 5245