Comparison of KIAA cDNA sequences between mouse and human (KIAA1342)

<<Original sequence data>>

mouse  mKIAA1342 (mid23032)     length:   2498 bp, CDS:     2 -  1501
human   KIAA1342  (fj00418)     length:   3910 bp, CDS:   184 -  1464

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     60 -   242     107       59      35.5
  CDS:    243 -  1523    1100      181      14.1
3'UTR:   1524 -  2559     709      265      27.2

amino acid

  CDS:    243 -  1523     383       44      10.3
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mid23032     1 CAGCCACGTCTGGAGTCTCAGAGACAAGCTTTTCAGAAGAGCCAACAGGA 50
                                                                 
fj00418      1 .................................................. 1

            51 ----+----*----+----*----+----*----+----*----+----* 100
mid23032    51 ACAGGGCAGGGTGGCACATTGCTGATAGAGAGC..GCGGACCTTCCTCCA 98
                        ||||||| ||  |||   ||| ||  | |||||| ||||  
fj00418      1 .........GGTGGCAAATCACTGTGCGAGGGCGAGTGGACCTCCCTCTT 41

           101 ----+----*----+----*----+----*----+----*----+----* 150
mid23032    99 GCCCCTCCCGCTG...CCGGTGCTGGTCCCCAATCCCCTGTGTT...... 139
                 ||  | | |||   | || |||||| |||    | ||| | |      
fj00418     42 TGCCTCCTCCCTGTTCCAGGAGCTGGTGCCCTGGGCTCTGCGCTGTTGTT 91

           151 ----+----*----+----*----+----*----+----*----+----* 200
mid23032   140 .....TCCCCTGGAAGCCTTGTTCCTGGATCCTTCCAGGTGAAT.....C 179
                      | | | |||||         |||||   || ||||||     |
fj00418     92 TTCAGCGCTCCGAAAGCCGGCGCTTGAGATCCAGGCAAGTGAATCCAGCC 141

           201 ----+----*----+----*----+----*----+----*----+----* 250
                                                         N  M  A 
mid23032   180 TGCCCGGAGTTCTTTCAGCACCTCGGACAGAGCACGCAG.AAAACATGGC 228
                | | |   | | |||||||||||||||||| ||||||| |||| |||||
fj00418    142 AGGCAGTTTTCCCTTCAGCACCTCGGACAGAACACGCAGTAAAAAATGGC 191
                                                         K  M  A 

           251 ----+----*----+----*----+----*----+----*----+----* 300
                P  I  T  T  S  R  V  E  F  D  E  I  P  T  V  V  G
mid23032   229 TCCTATCACCACCAGCCGCGTGGAATTCGATGAAATTCCCACAGTGGTGG 278
               ||| |||||||||||||| |  ||||| |||||||| |||||||||||||
fj00418    192 TCCGATCACCACCAGCCGGGAAGAATTTGATGAAATCCCCACAGTGGTGG 241
                P  I  T  T  S  R  E  E  F  D  E  I  P  T  V  V  G

           301 ----+----*----+----*----+----*----+----*----+----* 350
                 I  F  S  A  F  G  L  V  F  T  V  S  L  F  A  W  
mid23032   279 GCATCTTCAGTGCTTTTGGCCTCGTCTTCACTGTCTCTCTCTTTGCCTGG 328
               | ||||||||||| |||||||| |||||||| |||||||||||||| |||
fj00418    242 GGATCTTCAGTGCATTTGGCCTGGTCTTCACAGTCTCTCTCTTTGCATGG 291
                 I  F  S  A  F  G  L  V  F  T  V  S  L  F  A  W  

           351 ----+----*----+----*----+----*----+----*----+----* 400
               I  C  C  Q  R  R  S  A  K  S  N  K  T  P  P  Y  K 
mid23032   329 ATCTGCTGTCAGAGAAGATCAGCCAAATCCAACAAGACTCCTCCATACAA 378
               |||||||||||||||| |||| |||| || ||||||||||||||||||||
fj00418    292 ATCTGCTGTCAGAGAAAATCATCCAAGTCTAACAAGACTCCTCCATACAA 341
               I  C  C  Q  R  K  S  S  K  S  N  K  T  P  P  Y  K 

           401 ----+----*----+----*----+----*----+----*----+----* 450
                F  V  H  V  L  K  G  V  D  I  Y  P  E  N  L  S  S
mid23032   379 GTTTGTGCACGTGCTTAAAGGAGTTGATATCTACCCAGAAAACCTAAGTA 428
               ||||||||| |||||||| ||||||||||| ||||| |||||||||| ||
fj00418    342 GTTTGTGCATGTGCTTAAGGGAGTTGATATTTACCCTGAAAACCTAAATA 391
                F  V  H  V  L  K  G  V  D  I  Y  P  E  N  L  N  S

           451 ----+----*----+----*----+----*----+----*----+----* 500
                 K  K  K  F  G  G  D  D  K  S  E  V  K  G  K  A  
mid23032   429 GCAAAAAGAAGTTTGGAGGAGATGACAAGAGTGAAGTGAAGGGTAAAGCC 478
               |||||||||||||||||| |||||| || | |||||| |||  |||  | 
fj00418    392 GCAAAAAGAAGTTTGGAGCAGATGATAAAAATGAAGTAAAGAATAAGCCA 441
                 K  K  K  F  G  A  D  D  K  N  E  V  K  N  K  P  

           501 ----+----*----+----*----+----*----+----*----+----* 550
               A  L  P  N  L  S  L  H  L  D  L  E  K  R  D  L  N 
mid23032   479 GCTCTGCCCAACCTTTCCCTGCATCTTGACCTAGAGAAGCGAGACCTCAA 528
               ||| |||| ||   |||  ||||||| || || || ||| |||| |||||
fj00418    442 GCTGTGCCAAAGAATTCATTGCATCTGGATCTTGAAAAGAGAGATCTCAA 491
               A  V  P  K  N  S  L  H  L  D  L  E  K  R  D  L  N 

           551 ----+----*----+----*----+----*----+----*----+----* 600
                G  N  F  P  K  A  N  P  K  A  G  S  S  S  D  L  E
mid23032   529 TGGCAACTTCCCCAAAGCCAACCCCAAAGCTGGCAGCTCTTCTGATCTGG 578
               |||||| || |||||| |||||| |||| |||||||  ||||||||||||
fj00418    492 TGGCAATTTTCCCAAAACCAACCTCAAACCTGGCAGTCCTTCTGATCTGG 541
                G  N  F  P  K  T  N  L  K  P  G  S  P  S  D  L  E

           601 ----+----*----+----*----+----*----+----*----+----* 650
                 N  V  T  P  K  L  F  T  E  T  E  K  E  A  N  S  
mid23032   579 AAAATGTCACCCCAAAGCTCTTTACGGAGACAGAAAAGGAGGCCAATTCC 628
               | ||||  ||||| |||||||||   ||    ||||| ||| |   ||||
fj00418    542 AGAATGCAACCCCGAAGCTCTTTTTAGAAGGGGAAAAAGAGTCAGTTTCC 591
                 N  A  T  P  K  L  F  L  E  G  E  K  E  S  V  S  

           651 ----+----*----+----*----+----*----+----*----+----* 700
               P  E  S  L  K  S  S  T  S  L  T  S  E  E  K  Q  E 
mid23032   629 CCTGAGAGCTTGAAGTCCAGCACTTCCCTCACGTCAGAGGAGAAACAAGA 678
               |||||||| || ||||||||||||||||| || ||||| |||||||||||
fj00418    592 CCTGAGAGTTTAAAGTCCAGCACTTCCCTTACTTCAGAAGAGAAACAAGA 641
               P  E  S  L  K  S  S  T  S  L  T  S  E  E  K  Q  E 

           701 ----+----*----+----*----+----*----+----*----+----* 750
                K  L  G  T  L  F  L  S  L  E  Y  N  F  E  K  K  A
mid23032   679 GAAGCTGGGGACACTCTTCTTGTCTCTAGAGTACAACTTCGAGAAGAAAG 728
               ||||||||| || |||||||| ||  |||| |||||||||||||  ||||
fj00418    642 GAAGCTGGGAACTCTCTTCTTCTCCTTAGAATACAACTTCGAGAGAAAAG 691
                K  L  G  T  L  F  F  S  L  E  Y  N  F  E  R  K  A

           751 ----+----*----+----*----+----*----+----*----+----* 800
                 F  V  V  N  I  K  E  A  Q  G  L  P  A  M  D  E  
mid23032   729 CATTTGTGGTGAACATCAAGGAAGCCCAGGGCTTACCAGCCATGGACGAG 778
               |||||||||| || |||||||||||||  ||||| ||||||||||| |||
fj00418    692 CATTTGTGGTCAATATCAAGGAAGCCCGTGGCTTGCCAGCCATGGATGAG 741
                 F  V  V  N  I  K  E  A  R  G  L  P  A  M  D  E  

           801 ----+----*----+----*----+----*----+----*----+----* 850
               Q  S  M  T  S  D  P  Y  I  K  M  T  I  L  P  E  K 
mid23032   779 CAATCCATGACCTCTGACCCGTACATCAAAATGACAATCTTACCAGAGAA 828
               || || |||||||||||||| || ||||||||||| ||| | ||||||||
fj00418    742 CAGTCGATGACCTCTGACCCATATATCAAAATGACGATCCTCCCAGAGAA 791
               Q  S  M  T  S  D  P  Y  I  K  M  T  I  L  P  E  K 

           851 ----+----*----+----*----+----*----+----*----+----* 900
                K  H  R  V  K  T  R  V  L  R  K  T  L  D  P  V  F
mid23032   829 GAAGCACAGAGTGAAGACCAGAGTGCTCAGGAAGACGCTGGACCCTGTTT 878
               |||||| | |||||| || |||||||| || || ||  |||| || | ||
fj00418    792 GAAGCATAAAGTGAAAACTAGAGTGCTGAGAAAAACCTTGGATCCAGCTT 841
                K  H  K  V  K  T  R  V  L  R  K  T  L  D  P  A  F

           901 ----+----*----+----*----+----*----+----*----+----* 950
                 D  E  T  F  T  F  Y  G  I  P  Y  P  H  I  Q  E  
mid23032   879 TTGATGAAACCTTCACATTCTATGGAATCCCTTATCCCCACATCCAAGAG 928
               ||||||| ||||| ||||||||||| || || ||  |||| |||||||| 
fj00418    842 TTGATGAGACCTTTACATTCTATGGGATACCCTACACCCAAATCCAAGAA 891
                 D  E  T  F  T  F  Y  G  I  P  Y  T  Q  I  Q  E  

           951 ----+----*----+----*----+----*----+----*----+----* 1000
               L  S  L  H  F  T  V  L  S  F  D  R  F  S  R  D  D 
mid23032   929 CTCTCCTTGCACTTTACAGTTCTGAGTTTTGACAGGTTTTCTAGAGATGA 978
                |  |||||||||| ||| || ||||||||||||||||||| ||||||||
fj00418    892 TTGGCCTTGCACTTCACAATTTTGAGTTTTGACAGGTTTTCAAGAGATGA 941
               L  A  L  H  F  T  I  L  S  F  D  R  F  S  R  D  D 

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
                V  I  G  E  V  L  I  P  L  S  G  I  E  L  S  D  G
mid23032   979 TGTCATTGGAGAAGTCCTGATTCCTCTTTCAGGGATTGAATTATCAGATG 1028
               | ||||||| ||||| || |||||||| || || ||||||||||| || |
fj00418    942 TATCATTGGGGAAGTTCTAATTCCTCTCTCGGGAATTGAATTATCTGAAG 991
                I  I  G  E  V  L  I  P  L  S  G  I  E  L  S  E  G

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                 K  M  L  M  T  R  E  I  I  K  R  N  A  K  K  S  
mid23032  1029 GAAAAATGTTAATGACTAGAGAGATCATCAAGAGAAATGCTAAGAAGTCT 1078
               ||||||||||||||| ||||||||||||||||||||||| || |||||||
fj00418    992 GAAAAATGTTAATGAATAGAGAGATCATCAAGAGAAATGTTAGGAAGTCT 1041
                 K  M  L  M  N  R  E  I  I  K  R  N  V  R  K  S  

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
               S  G  R  G  E  L  L  V  S  L  C  Y  Q  S  T  T  N 
mid23032  1079 TCTGGCCGGGGTGAACTTCTGGTCTCTCTCTGTTATCAGTCCACTACAAA 1128
               || || ||||||||  | ||| |||||||||| ||||||||||| |||||
fj00418   1042 TCAGGACGGGGTGAGTTACTGATCTCTCTCTGCTATCAGTCCACCACAAA 1091
               S  G  R  G  E  L  L  I  S  L  C  Y  Q  S  T  T  N 

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                T  L  T  V  V  V  L  K  A  R  H  L  P  K  S  D  V
mid23032  1129 CACGCTCACTGTGGTGGTCTTAAAAGCGCGGCACCTACCGAAATCTGATG 1178
               ||| || |||||||| ||||||||||| || || || || ||||||||||
fj00418   1092 CACTCTAACTGTGGTTGTCTTAAAAGCTCGACATCTGCCTAAATCTGATG 1141
                T  L  T  V  V  V  L  K  A  R  H  L  P  K  S  D  V

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                 S  G  L  S  D  P  Y  V  K  V  N  L  Y  H  A  K  
mid23032  1179 TGTCTGGACTTTCAGATCCCTACGTCAAAGTGAACCTGTACCATGCCAAG 1228
               |||| ||||||||||||||||| |||||||||||||||||||||||||| 
fj00418   1142 TGTCCGGACTTTCAGATCCCTATGTCAAAGTGAACCTGTACCATGCCAAA 1191
                 S  G  L  S  D  P  Y  V  K  V  N  L  Y  H  A  K  

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
               K  R  I  S  K  K  K  T  H  V  K  K  C  T  P  N  A 
mid23032  1229 AAGAGAATCTCTAAAAAGAAGACTCACGTTAAGAAATGCACTCCCAACGC 1278
               ||||||||||| || ||||||||||| || ||||||||||| ||||| ||
fj00418   1192 AAGAGAATCTCCAAGAAGAAGACTCATGTGAAGAAATGCACCCCCAATGC 1241
               K  R  I  S  K  K  K  T  H  V  K  K  C  T  P  N  A 

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
                V  F  N  E  L  F  V  F  D  I  P  C  E  S  L  E  E
mid23032  1279 AGTGTTCAATGAACTGTTTGTCTTTGATATTCCTTGTGAGAGTCTTGAAG 1328
               |||||||||||| ||||||||||||||||||||||||||| | |||||||
fj00418   1242 AGTGTTCAATGAGCTGTTTGTCTTTGATATTCCTTGTGAGGGCCTTGAAG 1291
                V  F  N  E  L  F  V  F  D  I  P  C  E  G  L  E  D

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
                 I  S  V  E  F  L  V  L  D  S  E  R  G  S  R  N  
mid23032  1329 AAATCAGTGTTGAATTCTTGGTTTTGGATTCTGAAAGGGGATCCCGAAAT 1378
               | || ||||||||||| ||||||||||||||||||||||| |||||||||
fj00418   1292 ATATAAGTGTTGAATTTTTGGTTTTGGATTCTGAAAGGGGGTCCCGAAAT 1341
                 I  S  V  E  F  L  V  L  D  S  E  R  G  S  R  N  

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
               E  V  I  G  R  L  V  L  G  A  T  A  E  G  S  G  G 
mid23032  1379 GAGGTGATTGGACGGTTGGTCCTGGGTGCCACAGCAGAAGGAAGCGGTGG 1428
               ||||| || || | ||| ||| |||||||  ||||||||||||  |||||
fj00418   1342 GAGGTAATCGGGCAGTTAGTCTTGGGTGCAGCAGCAGAAGGAACTGGTGG 1391
               E  V  I  G  Q  L  V  L  G  A  A  A  E  G  T  G  G 

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
                G  H  W  K  E  I  C  D  F  P  R  R  Q  I  A  K  W
mid23032  1429 GGGGCACTGGAAGGAGATCTGTGACTTCCCCAGGAGACAAATTGCTAAGT 1478
                | ||||||||| ||||||||||||| |||||||||||||||||| ||||
fj00418   1392 AGAGCACTGGAAAGAGATCTGTGACTACCCCAGGAGACAAATTGCCAAGT 1441
                E  H  W  K  E  I  C  D  Y  P  R  R  Q  I  A  K  W

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
                 H  M  L  C  D  G  *                             
mid23032  1479 GGCACATGCTCTGTGATGGTTAGCTTCCTGGCCATGAGCTGCAACTTAAA 1528
               ||||| |||||||||||||||||| |||| ||| |||| || ||||||||
fj00418   1442 GGCACGTGCTCTGTGATGGTTAGCATCCTAGCCGTGAGTTGGAACTTAAA 1491
                 H  V  L  C  D  G  *                             

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mid23032  1529 GATTTTTACTAGGCAAGAAGCAATTTTCTTTCT...TATACACGATTGTA 1575
               | ||||||||||||||| || ||||||||||||   ||||   ||||| |
fj00418   1492 GGTTTTTACTAGGCAAGGAGAAATTTTCTTTCTTTCTATATTGGATTGCA 1541

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mid23032  1576 AGCTTGCAGCACAGCAAGCTACTTTATTATTTATTTTTATTTACTTATTT 1625
               ||||||  | | | |||||||| || || ||              |  ||
fj00418   1542 AGCTTG..GGAAATCAAGCTACCTTTTTGTT.............GTTGTT 1576

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mid23032  1626 GTTTTGGTTAGAAGTGGATTAAGTTAATAGACCAGAAAATAGTTGTAAAT 1675
               ||| | | ||||| |||||| | ||| ||||||||||| ||  |  ||||
fj00418   1577 GTTGTTGCTAGAAATGGATTGAATTAGTAGACCAGAAAGTAACTTCAAAT 1626

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mid23032  1676 GTGTATTATGATAATTTCCTCTTTTATTAGAGGTGTTGGCCAAGTTTTCA 1725
               |||||||||||||||||||   ||||||||| | |||||  || ||||||
fj00418   1627 GTGTATTATGATAATTTCCCTATTTATTAGAAGAGTTGGATAAATTTTCA 1676

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mid23032  1726 TAAGATATTCAGTTTCCC........TCTGTGTGGTATTAAGTGGGCCAA 1767
               ||||||||||| | || |        |    ||| ||| |   ||   | 
fj00418   1677 TAAGATATTCAATATCTCCTTCAGATTACCAGTGATATAACTAGGAATAG 1726

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mid23032  1768 CCCAGCCTGTTATGAGCACCCTAGCTTAACCTTGTCACAGATGTGTGTTG 1817
                |   | | ||||||  ||  |  |  ||     || || ||      | 
fj00418   1727 TCAGACATTTTATGAATACTGTGCCAGAA.....TCCCAAAT....TATA 1767

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mid23032  1818 TAGGTGATGGTTTCAGTTTTGCTTGGTAGTGGAAATCAGGTGATTGTTAG 1867
                | ||||   | ||| |    | ||  |    || | |  ||    | ||
fj00418   1768 AATGTGACAATCTCATTGGAACATGTCACAAAAAGTTA.ATGTGATTAAG 1816

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mid23032  1868 AGTTAAAAATGAGAACCACACCTTTTTGTATGAAAATTAATCCATGTTTC 1917
               | ||||||| || ||  |  ||||    | |||||||| |||||| | ||
fj00418   1817 ATTTAAAAACGAAAAGTATGCCTTGCCTTGTGAAAATTTATCCATTTATC 1866

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mid23032  1918 TTCAGGTTGGGGGAGATAGGTTTTATTTAAATCCAAAGATATTTCCAAAA 1967
               |||||||||||| |   |  |||| |||||||||||||||| |   ||||
fj00418   1867 TTCAGGTTGGGGAAATCAATTTTTCTTTAAATCCAAAGATACTAAAAAAA 1916

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mid23032  1968 TGTCCTCAAGTCTGGTTTTTTTTTTTTTAGTTAAATACGTCATGTACAAA 2017
               ||||||| ||          ||| | ||  |||| |  ||||||| ||||
fj00418   1917 TGTCCTCCAG..........TTTGTATTTATTAATTCTGTCATGTGCAAA 1956

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mid23032  2018 TGATTGTCTTATATATCAAAGTATGCTGT......AATTTTCATGGTGAT 2061
               || ||||| |  |||| |||||||   ||      | |||   | || ||
fj00418   1957 TGGTTGTCCTGCATATAAAAGTATCTGGTCATTTCAGTTTGGTTTGTAAT 2006

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mid23032  2062 TATTTGATACAGTCTCATCATAAGAAGGGTAGCTTAGGTTCATTTCATAA 2111
               |||||||| || | | |||||||||   ||| || || ||||||||| ||
fj00418   2007 TATTTGATGCAATTTTATCATAAGA...GTAACTCAGATTCATTTCAAAA 2053

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mid23032  2112 ATACAGCAAACAAGTTGAGAAATTAATTTATAAAAGGGCTGAATTGAAGA 2161
                 ||||  |||||| |||||||||| ||||| |||||||||| ||| |||
fj00418   2054 GGACAGTGAACAAGCTGAGAAATTATTTTATCAAAGGGCTGAGTTG.AGA 2102

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mid23032  2162 ACACTGTGGTTGATATGAGATTTTTTTTTGTTCCA...TCACATGTGAGT 2208
               ||||||||| ||| ||   |||||| |     | |   | ||||||||||
fj00418   2103 ACACTGTGGCTGAAATATAATTTTTCTCCCCCCTAAGGTTACATGTGAGT 2152

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mid23032  2209 CA......TGTAAAATTTAACTTCACCTAAGAACCATGGTCTTGAATTAT 2252
               ||      |||||||| |||| |||| |||||||||||| |||| |||||
fj00418   2153 CAAAATTTTGTAAAATATAACCTCACATAAGAACCATGGCCTTGGATTAT 2202

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mid23032  2253 TCACTGCCTGTCAGAAGCCTCAGTGTGGCCTAAGATACTCCTATTTACCA 2302
               ||||||||||||| ||||||||||||||||| ||| |  ||||| |||| 
fj00418   2203 TCACTGCCTGTCACAAGCCTCAGTGTGGCCTGAGAAATCCCTATGTACCT 2252

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mid23032  2303 TTGTGAAGTTGTCAGACTAGTGA......AAAAAAATAAACCTAAGCTAG 2346
               ||||||| ||||   | |||| |      ||| |||||||| | | ||||
fj00418   2253 TTGTGAAATTGTTGAATTAGTTAGTGAATAAAGAAATAAACTTCAACTAG 2302

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mid23032  2347 CAATTCAGTTAGGAATACATTTTTTTAAATATAAAAATCTATCAGTGTAC 2396
                ||| ||||||| | | || |||| | |    ||| |  ||| ||||| |
fj00418   2303 AAATCCAGTTAGAAGTGCAATTTTCTTATAGGAAATAGGTAT.AGTGTGC 2351

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mid23032  2397 AAGTGTATTTTCAAGATTGTCTTTCCCCCTCAGAGTAGACATGGCTACTT 2446
               ||||||| ||| |||    || ||    | |||||| | |||||| || |
fj00418   2352 AAGTGTACTTTTAAGGCCATCGTTTGTACCCAGAGTCGGCATGGCCACCT 2401

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mid23032  2447 AAGT....TTTTAACTTACTCTTACCGAGAAAGAACTAA...GCGACTTA 2489
               ||||     ||||| ||| | |  || |||||  | |||   || |||| 
fj00418   2402 AAGTCTTCATTTAATTTATTGTCCCCCAGAAAAGATTAAGATGCTACTTG 2451

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mid23032  2490 AAAAGAAAG......................................... 2498
               ||||||  |                                         
fj00418   2452 AAAAGACTGTGAAGATTTTTTACATTGCCAGATAAAAAGTGTTACTTAAC 2501

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2502 CAACAAACAAATGTAAGACTACAAAATCGTTCAAGAGCAATTCTAATATA 2551

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2552 ATTTACATATGTTCACGCAAAATATACTTAGGCTGTCAAATTAGCACAAC 2601

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2602 AAAGAATGTGTTTCACTATCTTTTCTAGGCTAATTTGTCTTGAGCTGTTG 2651

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2652 TCTATAGAGCAGTTTACAGACTTGTGTCTTGTATCATTTTCCAGTGCCAG 2701

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2702 GGTTCTGAAATTCATTCAGAACCTGTTAGATTAAAGCTGCACCCTGTGAT 2751

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2752 TATTTGAAAAGAATTAGCTTGAGAGTAATGTCACTATATTTGAGTTCTTA 2801

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2802 GAGAAGTATGAGTGGAACTTGAGTACAGTTGAATTATTAAATATGCAAGT 2851

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2852 TAGAAATTAAGTCTACTGAAAAATTTACATTTTGAGTCAGGTTTTGTGTC 2901

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2902 AGTACTTTAGCAGTTTTTGAGAATGTGTTTGATATCACAGTGTTTGTAAA 2951

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid23032  2499 .................................................. 2499
                                                                 
fj00418   2952 TTCTATGAAAAATGCATTTTCCAAACAACTTATACATGTTTTTTATGACT 3001

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3002 ATGCCTAATGTAAAGAAAATGTATTACATTCTGTATGTACAAAGATTAAA 3051

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3052 AATCAACCTCTTTTTTGTGCTTTAAAATGACTTTGGGATTAAAAAAGCAT 3101

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3102 ATTTCCCAATCATTGTCTTCATTCCACTACAAAGTCACCTCACAGCATCT 3151

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3152 TGCTCCACTCGGCATCTCTGTGAAAGCAACATGAAATGAACTGTAGTAGG 3201

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3202 TGTGTAGTTTGGGGAAGTCAAATGGCCATTTTATGTATGTGCATTTGGTA 3251

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3252 TCATGGGCCGTGGAACAGAATATATGTTGGACCTCTGAAAAGTTGTAAGG 3301

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3302 GGCCAATTCTAAGTATTCTTCACGGCAGCCAGAAGTTAATGGTGGTAGCA 3351

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3352 GCTGAGGTATGGTTGTTGGACGAGGCCGATTTTTTTTTTTTAACATGGAA 3401

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3402 CAATGAAACCAACAACAAACATTTTTAAAATTAAAATGGATAATTTGTAA 3451

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3452 ATAGTTTTTAGCTTTTAAAATTTAAAGTGTTTTTGAGTGTGAAAAGTTGA 3501

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3502 GTAAAACTATTTGCAACTGGTTTTCAGAAAAGAGAAAAGAAACAACAAAG 3551

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3552 GAATTGAAACAGGCAGGGAGATCTTAATACCTAATTTCATCATTTCTGAA 3601

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3602 AATGTACTGTTTTAGAATGTATTACAATATCAATGTGAATATCTTGAATC 3651

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3652 CTGTTACAAATCCTGCACTGTATTAAACATGTAAATTAATTGTTTGTCTG 3701

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3702 ATTAGCCAATCTCACCACCCAAATGGGGAGGTATACATGTTTGAAGAACT 3751

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3752 GTGTAACTCAGTAATTGATTTGTTCTGATGTTGTAACTCAATAGAAGTGT 3801

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3802 TTTGGAAGGAAGCATGGTGTGTGAGACAGTGTCTGTTCTTTTGTGCCAGC 3851

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mid23032  2499 .................................................. 2499
                                                                 
fj00418   3852 TCTGTATGATGTTTGTAAGACCATGTTTGTAAGACATGAATAAATTGCTG 3901

          4001 ----+---- 4009
mid23032  2499 ......... 2499
                        
fj00418   3902 CTTTTGCCC 3910