# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mid20040.fasta.nr -Q ../query/mKIAA4173.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4173, 381 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921054 sequences Expectation_n fit: rho(ln(x))= 5.2980+/-0.000185; mu= 9.9517+/- 0.010 mean_var=77.4257+/-15.163, 0's: 35 Z-trim: 37 B-trim: 182 in 1/66 Lambda= 0.145758 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|24418560|sp|Q9ERE8.1|MESD1_MOUSE RecName: Full= ( 362) 2349 503.2 3.6e-140 gi|24418561|sp|Q9H1K6.1|MESD1_HUMAN RecName: Full= ( 362) 2313 495.6 6.9e-138 gi|114658499|ref|XP_510543.2| PREDICTED: mesoderm ( 362) 2308 494.6 1.4e-137 gi|109082135|ref|XP_001109814.1| PREDICTED: simila ( 362) 2305 494.0 2.2e-137 gi|194206224|ref|XP_001916023.1| PREDICTED: mesode ( 362) 2303 493.5 3e-137 gi|151554712|gb|AAI50078.1| MESDC1 protein [Bos ta ( 362) 2288 490.4 2.6e-136 gi|57048439|ref|XP_545882.1| PREDICTED: similar to ( 363) 2280 488.7 8.4e-136 gi|126273641|ref|XP_001363119.1| PREDICTED: simila ( 370) 2115 454.0 2.4e-125 gi|50753053|ref|XP_413848.1| PREDICTED: similar to ( 355) 1871 402.7 6.5e-110 gi|224062623|ref|XP_002199295.1| PREDICTED: mesode ( 355) 1865 401.4 1.5e-109 gi|38174403|gb|AAH61331.1| Mesoderm development ca ( 354) 1766 380.6 2.9e-103 gi|47213620|emb|CAF95961.1| unnamed protein produc ( 354) 1736 374.3 2.3e-101 gi|209156242|gb|ACI34353.1| Mesoderm development c ( 354) 1713 369.5 6.5e-100 gi|125820596|ref|XP_001337121.1| PREDICTED: simila ( 354) 1648 355.8 8.4e-96 gi|149440868|ref|XP_001512351.1| PREDICTED: simila ( 167) 951 209.0 6.2e-52 gi|72052010|ref|XP_794367.1| PREDICTED: hypothetic ( 340) 940 206.9 5.4e-51 gi|149441050|ref|XP_001514067.1| PREDICTED: simila ( 175) 559 126.6 4.2e-27 gi|157020078|gb|EAA04618.3| AGAP007474-PA [Anophel (2717) 420 98.2 2.2e-17 gi|108877991|gb|EAT42216.1| talin [Aedes aegypti] (2748) 412 96.6 7.1e-17 gi|167873092|gb|EDS36475.1| talin-1 [Culex quinque (2738) 408 95.7 1.3e-16 gi|215510505|gb|EEC19958.1| talin, putative [Ixode (2605) 402 94.4 2.9e-16 gi|166796755|gb|AAI59153.1| Tln2 protein [Xenopus (1372) 396 93.0 4.3e-16 gi|55139380|gb|AAV41376.1| talin 1 [Danio rerio] (2538) 394 92.7 9.3e-16 gi|55962543|emb|CAI11495.1| novel protein similar (2255) 393 92.5 9.8e-16 gi|189521470|ref|XP_684856.3| PREDICTED: talin1, l (2543) 393 92.5 1.1e-15 gi|71682403|gb|AAI00263.1| Tln1 protein [Rattus no (1552) 384 90.5 2.7e-15 gi|224062287|ref|XP_002194889.1| PREDICTED: talin (2542) 386 91.1 3e-15 gi|149045753|gb|EDL98753.1| rCG55135, isoform CRA_ (2123) 384 90.6 3.5e-15 gi|149045752|gb|EDL98752.1| rCG55135, isoform CRA_ (2541) 384 90.6 4e-15 gi|81175199|sp|P54939.2|TLN1_CHICK RecName: Full=T (2541) 384 90.6 4e-15 gi|149045751|gb|EDL98751.1| rCG55135, isoform CRA_ (2577) 384 90.6 4e-15 gi|227256|prf||1617167A talin (2541) 383 90.4 4.6e-15 gi|148670518|gb|EDL02465.1| talin 1, isoform CRA_a (2123) 380 89.7 6.2e-15 gi|148670519|gb|EDL02466.1| talin 1, isoform CRA_b (2541) 380 89.8 7.1e-15 gi|135290|sp|P26039.1|TLN1_MOUSE RecName: Full=Tal (2541) 380 89.8 7.1e-15 gi|123228001|emb|CAM17190.1| talin 1 [Mus musculus (2541) 380 89.8 7.1e-15 gi|110762380|ref|XP_391944.3| PREDICTED: similar t (2484) 379 89.6 8.1e-15 gi|119900517|ref|XP_001250862.1| PREDICTED: talin (2541) 379 89.6 8.2e-15 gi|109081377|ref|XP_001101705.1| PREDICTED: simila (2542) 379 89.6 8.2e-15 gi|109081375|ref|XP_001101608.1| PREDICTED: simila (2543) 379 89.6 8.2e-15 gi|73971312|ref|XP_866654.1| PREDICTED: similar to (1543) 376 88.8 8.7e-15 gi|73971314|ref|XP_866664.1| PREDICTED: similar to (1561) 376 88.8 8.8e-15 gi|55859707|emb|CAI10978.1| talin 1 [Homo sapiens] (2429) 378 89.4 9.2e-15 gi|6739602|gb|AAF27330.1| talin [Homo sapiens] (2540) 378 89.4 9.5e-15 gi|119578757|gb|EAW58353.1| talin 1, isoform CRA_b (2541) 378 89.4 9.5e-15 gi|224090250|ref|XP_002192479.1| PREDICTED: talin (2541) 378 89.4 9.5e-15 gi|27552808|gb|AAH42923.1| Talin 1 [Homo sapiens] (2541) 378 89.4 9.5e-15 gi|81175200|sp|Q9Y490.3|TLN1_HUMAN RecName: Full=T (2541) 378 89.4 9.5e-15 gi|114657431|ref|XP_510461.2| PREDICTED: talin 2 i (2542) 378 89.4 9.5e-15 gi|114657429|ref|XP_001173465.1| PREDICTED: talin (2543) 378 89.4 9.5e-15 >>gi|24418560|sp|Q9ERE8.1|MESD1_MOUSE RecName: Full=Meso (362 aa) initn: 2349 init1: 2349 opt: 2349 Z-score: 2672.8 bits: 503.2 E(): 3.6e-140 Smith-Waterman score: 2349; 100.000% identity (100.000% similar) in 362 aa overlap (20-381:1-362) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK ::::::::::::::::::::::::::::::::::::::::: gi|244 MASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK 10 20 30 40 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS 290 300 310 320 330 340 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|244 QALRERSSPRTLPPVNSNSVN 350 360 >>gi|24418561|sp|Q9H1K6.1|MESD1_HUMAN RecName: Full=Meso (362 aa) initn: 2313 init1: 2313 opt: 2313 Z-score: 2631.9 bits: 495.6 E(): 6.9e-138 Smith-Waterman score: 2313; 98.066% identity (99.724% similar) in 362 aa overlap (20-381:1-362) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK ::::::::::::::::::.::.:::::::::::::.::::: gi|244 MASGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCK 10 20 30 40 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|244 GKMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::.:: gi|244 STSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|244 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLS 290 300 310 320 330 340 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|244 QALRERSSPRTLPPVNSNSVN 350 360 >>gi|114658499|ref|XP_510543.2| PREDICTED: mesoderm deve (362 aa) initn: 2308 init1: 2308 opt: 2308 Z-score: 2626.2 bits: 494.6 E(): 1.4e-137 Smith-Waterman score: 2308; 97.790% identity (99.724% similar) in 362 aa overlap (20-381:1-362) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK ::::::::::::::::::.::.:::::::::::::.::::: gi|114 MASGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCK 10 20 30 40 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|114 GKMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QGCAVLRGTPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::.:: gi|114 STSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|114 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLS 290 300 310 320 330 340 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|114 QALRERSSPRTLPPVNSNSVN 350 360 >>gi|109082135|ref|XP_001109814.1| PREDICTED: similar to (362 aa) initn: 2305 init1: 2305 opt: 2305 Z-score: 2622.8 bits: 494.0 E(): 2.2e-137 Smith-Waterman score: 2305; 97.514% identity (99.724% similar) in 362 aa overlap (20-381:1-362) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK ::::::::::::::::::..:.::.::::::::::.::::: gi|109 MASGSAGKPTGEAASPAPATAIGGTSSQPRKRLVSVCDHCK 10 20 30 40 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|109 GKMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::.:: gi|109 STSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLS 290 300 310 320 330 340 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|109 QALRERSSPRTLPPVNSNSVN 350 360 >>gi|194206224|ref|XP_001916023.1| PREDICTED: mesoderm d (362 aa) initn: 2303 init1: 2303 opt: 2303 Z-score: 2620.5 bits: 493.5 E(): 3e-137 Smith-Waterman score: 2303; 98.066% identity (99.448% similar) in 362 aa overlap (20-381:1-362) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK ::::::::::::::::::.::::::::::::::::.::::: gi|194 MASGSAGKPTGEAASPAPASAVGGASSQPRKRLVSVCDHCK 10 20 30 40 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|194 GKMQLVADLLLLSSEARPVLFEGPASSCAGAESFEQCRDTIIARTKGLSILTHDVQSQLN 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::.:: gi|194 STSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|194 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLS 290 300 310 320 330 340 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|194 QALRERSSPRTLPPVNSNSVN 350 360 >>gi|151554712|gb|AAI50078.1| MESDC1 protein [Bos taurus (362 aa) initn: 2288 init1: 2288 opt: 2288 Z-score: 2603.5 bits: 490.4 E(): 2.6e-136 Smith-Waterman score: 2288; 97.514% identity (99.171% similar) in 362 aa overlap (20-381:1-362) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK :::::::::. :::::::.::::::::::::::::.::::: gi|151 MASGSAGKPSVEAASPAPASAVGGASSQPRKRLVSVCDHCK 10 20 30 40 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|151 GKMQLVADLLLLSSEARPVLFEGPASSCAGAESFEQCRDTIIARTKGLSILTHDVQSQLN 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::.:: gi|151 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVGALVGFATEPQFLGRAAAVSAEG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|151 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLS 290 300 310 320 330 340 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|151 QALRERSSPRTLPPVNSNSVN 350 360 >>gi|57048439|ref|XP_545882.1| PREDICTED: similar to mes (363 aa) initn: 1879 init1: 1879 opt: 2280 Z-score: 2594.3 bits: 488.7 E(): 8.4e-136 Smith-Waterman score: 2280; 97.245% identity (98.898% similar) in 363 aa overlap (20-381:1-363) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK :::::::::.::::::::.::::.: :::::::::.::::: gi|570 MASGSAGKPSGEAASPAPASAVGAACSQPRKRLVSVCDHCK 10 20 30 40 70 80 90 100 110 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGA-ESFEQCRDTIIARTKGLSILTHDVQSQL :::::::::::::::::::::::::. ::: :::::::::::::::::::::::::::: gi|570 GKMQLVADLLLLSSEARPVLFEGPAASCAGAAESFEQCRDTIIARTKGLSILTHDVQSQL 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 NMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 NMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEV 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 EQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 EQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKC 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 MSTSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|570 MSTSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAE 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 GKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 GKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLL 290 300 310 320 330 340 360 370 380 mKIAA4 SQALRERSSPRTLPPVNSNSVN :::::::::::::::::::::: gi|570 SQALRERSSPRTLPPVNSNSVN 350 360 >>gi|126273641|ref|XP_001363119.1| PREDICTED: similar to (370 aa) initn: 2029 init1: 1798 opt: 2115 Z-score: 2406.7 bits: 454.0 E(): 2.4e-125 Smith-Waterman score: 2115; 90.000% identity (95.946% similar) in 370 aa overlap (20-381:1-370) 10 20 30 40 50 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASP-APGSAVG-----GASSQPRKRLVS :::::.:: ::::::: ::.:.: :..::::::::: gi|126 MASGSSGKSTGEAASPPAPASGVCHSSAVGVGSQPRKRLVS 10 20 30 40 60 70 80 90 100 110 mKIAA4 ICDHCKGKMQLVADLLLLSSEARPVLFEGP-ASPGAGA-ESFEQCRDTIIARTKGLSILT .::::: :::::::::::::::::::.:: :: : :. ::::.:::::::::::::::: gi|126 VCDHCKVKMQLVADLLLLSSEARPVLLEGSTASSGPGSGESFEKCRDTIIARTKGLSILT 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 HDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRV ::::::::::::.::::::.:::.:::::::::::::::::::::::::::::::::::: gi|126 HDVQSQLNMGRFSEAGDSLAELGELVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRV 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 TRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQ :::::::::::.::::::::::::::::::::.::::::::::::::::.::::::.::: gi|126 TRCRHEVEQGCGVLRATPLADMTPQLLLEVSQSLSRNLKFLTDACALASEKSRDRFAREQ 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 FKLGVKCMSTSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FKLGVKCMSTSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGR 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 AAAVSTEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAV ::.:: :::::::::::::::::::::::::::::.::::::.:::.::::::::::::: gi|126 AASVSPEGKAVQTAILGGAMSVVSACVLLTQCLRDIAQHPDGGAKMTDHRERLRNSACAV 290 300 310 320 330 340 360 370 380 mKIAA4 SEGCTLLSQALRERSSPRTLPPVNSNSVN :.::.:::::::::::::::::::::::: gi|126 SDGCNLLSQALRERSSPRTLPPVNSNSVN 350 360 370 >>gi|50753053|ref|XP_413848.1| PREDICTED: similar to MES (355 aa) initn: 1659 init1: 1659 opt: 1871 Z-score: 2129.7 bits: 402.7 E(): 6.5e-110 Smith-Waterman score: 1871; 78.729% identity (94.475% similar) in 362 aa overlap (20-381:1-355) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK ::::..:: ..:.. :... ..:: ::.:.::::::: gi|507 MASGGSGKSSSEVS----GGGIPSGSSLQRKKLISICDHCK 10 20 30 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN ::::::::::::::.::: :. . : ::::.:::::::::::::::::::::::: gi|507 IKMQLVADLLLLSSETRPVNTESLSVFG---ESFEKCRDTIIARTKGLSILTHDVQSQLN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE ::::::.:.::.:.:.:::::::::::::::::: :::::::.:::::::.::::::::: gi|507 MGRFGEVGESLMEMGELVVSLTECSAHAAYLAAVETPGAQPAMPGLVDRYKVTRCRHEVE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM .::.::..::::::.:::::::::..:.:::::::::.:::.::.:.:..:::::.:::: gi|507 HGCGVLKTTPLADMSPQLLLEVSQNMSKNLKFLTDACVLASEKSKDKFAKEQFKLSVKCM 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::.:::..::::.:.::.::::::::.: :::::::::::::.::... :: gi|507 STSASALLACVKEVKTSPSELTRNRCVLFSGPLVQSVYALVGFATEPQFLGKAATINPEG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS :::::::::::::::::::::::::::.::::..:.::::.::::::::::::.::.::: gi|507 KAVQTAILGGAMSVVSACVLLTQCLRDIAQHPESSTKMSDYRERLRNSACAVSDGCNLLS 280 290 300 310 320 330 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|507 QALRERSSPRTLPPVNSNSVN 340 350 >>gi|224062623|ref|XP_002199295.1| PREDICTED: mesoderm d (355 aa) initn: 1659 init1: 1659 opt: 1865 Z-score: 2122.8 bits: 401.4 E(): 1.5e-109 Smith-Waterman score: 1865; 79.006% identity (94.199% similar) in 362 aa overlap (20-381:1-355) 10 20 30 40 50 60 mKIAA4 VAAAVVAGSPAACQCPLGAMASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCK ::::..:: ..:.. : : . ..:: ::.:.::::::: gi|224 MASGGSGKSSSEVS--AGG--IPSSSSLQRKKLISICDHCK 10 20 30 70 80 90 100 110 120 mKIAA4 GKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLN ::::::::::::::.::: :. . : ::::.:::::::::::::::::::::::: gi|224 IKMQLVADLLLLSSETRPVNTESLSVFG---ESFEKCRDTIIARTKGLSILTHDVQSQLN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 MGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVE ::::::.:.::.:.:.:::::::::::::::::: :::::::.:::::::.::::::::: gi|224 MGRFGEVGESLMEMGELVVSLTECSAHAAYLAAVETPGAQPAMPGLVDRYKVTRCRHEVE 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 QGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCM .::.::..::::::.:::::::::..:.:::::::::.:::.::.:.:..:::::.:::: gi|224 HGCGVLKTTPLADMSPQLLLEVSQNMSKNLKFLTDACVLASEKSKDKFAKEQFKLSVKCM 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 STSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEG :::::::::::.:::..::::.:.::.::::::::.: :::::::::::::.::... :: gi|224 STSASALLACVKEVKTSPSELTRNRCVLFSGPLVQSVYALVGFATEPQFLGKAATINPEG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA4 KAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLS :::::::::::::::::::::::::::.::::..:.::::.::::::::::::.::.::: gi|224 KAVQTAILGGAMSVVSACVLLTQCLRDIAQHPESSTKMSDYRERLRNSACAVSDGCNLLS 280 290 300 310 320 330 370 380 mKIAA4 QALRERSSPRTLPPVNSNSVN ::::::::::::::::::::: gi|224 QALRERSSPRTLPPVNSNSVN 340 350 381 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 22:25:01 2009 done: Tue Mar 17 22:31:22 2009 Total Scan time: 866.940 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]