FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4036.ptfa, 629 aa vs ./tmplib.26680 library 1768388 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.0731+/-0.00417; mu= 19.2185+/- 0.280 mean_var=82.1639+/-19.133, 0's: 0 Z-trim: 2 B-trim: 17 in 1/35 Lambda= 0.1415 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0255 ( 643 res) mph00815 ( 643) 1179 251 2.7e-67 >>mKIAA0255 ( 643 res) mph00815 (643 aa) initn: 775 init1: 651 opt: 1179 Z-score: 1300.4 bits: 250.8 E(): 2.7e-67 Smith-Waterman score: 1184; 36.439% identity (41.714% ungapped) in 601 aa overlap (95-629:53-643) 70 80 90 100 110 120 mKIAA4 RARSDEHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEAL : :.:.::::: : :.. :.:::.: mKIAA0 TFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSLPFCQPIK--ITYKAENLGEVL 30 40 50 60 70 80 130 140 150 160 170 mKIAA4 QGVELEFSGLDIKFKDDVMPGTYCE-----IDLDKEKRDAFVYAIKNHYWYQMYIDDLPI .: .. . ... .... . :. : : :. . : ..:. .. :.::. mKIAA0 RGDRIVNTPFQVLMNSEKKCEVLCNQSNKPITLTVEQSRLVAERITEEYYVHLIADNLPV 90 100 110 120 130 140 180 190 mKIAA4 W-------------------------GI-VGEAD------------------ENGEDYYL : .: .: :. :. mKIAA0 ATRLELYSSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLHNHLSFILYYHREDMEEDQE 150 160 170 180 190 200 200 210 220 230 240 mKIAA4 WTYK--KLEIGFNGNRIVDVNL-------TSEGKVKLV----PNTKIQM--SYSVKWKKS ::. ..:. .. :. :.. :: .: :. . :. .:::.:..: mKIAA0 HTYRVVRFEVIPQSIRLEDLKTGEKSSCTLPEGANSLPQEIDPTKENQLYFTYSVHWEES 210 220 230 240 250 260 250 260 270 280 290 300 mKIAA4 DVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEE :.:. .:.: :: : : ::::::.:: ..:.:: :..:::..:::::: : :.:: mKIAA0 DIKWASRWDTYLTMSDVQ--IHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANYNKE-- 270 280 290 300 310 310 320 330 340 350 mKIAA4 MDDMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLY-T ::.. : .: ::: :::::::: ..:.:.:::.::: :.: . ::::.:::. : . mKIAA0 -DDIE-DTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPS 320 330 340 350 360 370 360 370 380 390 400 410 mKIAA4 ERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGRRWIKQMFIGAFLIPAMVCGTAFFINF ::....:: :.. . .:. .: :: :.:: : : : : :..: : : .: mKIAA0 SRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPGVVFGICFVLNC 380 390 400 410 420 430 420 430 440 450 460 470 mKIAA4 IAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQP-NFPCRVNAVPRPIP . :.: :.:: ::::. :. : . ::: .: .: . :: . : :.: .:: :: mKIAA0 FIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFG--FRKQPYDNPVRTNQIPRQIP 440 450 460 470 480 490 480 490 500 510 520 530 mKIAA4 EKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCV :..:.:. : . ..::::::..:::..:::...: ..::..::..::..:: . . mKIAA0 EQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQI 500 510 520 530 540 550 540 550 560 570 580 590 mKIAA4 TIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAV .:: .:: : :::::: : .:: ....:.:: .:...:. : . .. . .:::: .. mKIAA0 SIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTL 560 570 580 590 600 610 600 610 620 mKIAA4 FSTALGIMCGAIGYMGTSAFVRKIYTNVKID . .. .. :.::.... ::::::. :::: mKIAA0 MVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 620 630 640 629 residues in 1 query sequences 1768388 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:59:50 2006 done: Mon Mar 27 10:59:51 2006 Scan time: 0.790 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]