Comparison of KIAA cDNA sequences between mouse and human (KIAA0452)
<<Original sequence data>>
mouse mKIAA0452 (mid16058) length: 2257 bp, CDS: 2 - 1726
human KIAA0452 (hg00323) length: 6256 bp, CDS: 2 - 1363
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 17 - 19 2 1 33.3
CDS: 20 - 1363 770 112 12.7
3'UTR: 1364 - 6118 770 627 44.9
amino acid
CDS: 20 - 1363 269 179 40.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
H G Q R P G R P A G -
mid16058 1 ................CACGGCCAGCGGCCCGGGCGACCTGCCGGCGG.. 32
|| ||| | || | | ||| | || |
hg00323 1 GGTGGAGACACCGCCTCAGGGCTCGGTGCACAGTGGACATTTGGGGAGCG 50
V E T P P Q G S V H S G H L G S V
51 ----+----*----+----*----+----*----+----*----+----* 100
mid16058 33 .................................................. 33
hg00323 51 TTGTGGGTGACCCCCACACAGGCACTGGGAATGCAGGGGAGAGGGGGCCA 100
V G D P H T G T G N A G E R G P
101 ----+----*----+----*----+----*----+----*----+----* 150
mid16058 33 .................................................. 33
hg00323 101 AGGGGGAAAGGGGCCAGAGTGTTGGCTTTGGATTCAGGAGGGATGGATTC 150
R G K G A R V L A L D S G G M D S
151 ----+----*----+----*----+----*----+----*----+----* 200
S P V S S L H E A
mid16058 33 .......................GGTCTCCTGTGAGCAGCCTCCATGAGG 59
|| |||||| |||||||||||||||||
hg00323 151 CAGTCCTAGCTTGCCACTTATTAGGACTCCTGAGAGCAGCCTCCATGAGG 200
S P S L P L I R T P E S S L H E A
201 ----+----*----+----*----+----*----+----*----+----* 250
L D Q C M T A L D L F L T N Q F
mid16058 60 CCCTGGACCAGTGCATGACAGCCCTGGACCTCTTCCTTACCAACCAGTTC 109
||||||||||||||||||| ||||||||||||||||| ||||||||||||
hg00323 201 CCCTGGACCAGTGCATGACCGCCCTGGACCTCTTCCTCACCAACCAGTTC 250
L D Q C M T A L D L F L T N Q F
251 ----+----*----+----*----+----*----+----*----+----* 300
S E A L S Y L K P R T K E S M Y H
mid16058 110 TCAGAAGCACTCAGCTACCTCAAACCCAGAACCAAGGAGAGCATGTATCA 159
||||||||||||||||||||||| |||||||||||||| |||||||| ||
hg00323 251 TCAGAAGCACTCAGCTACCTCAAGCCCAGAACCAAGGAAAGCATGTACCA 300
S E A L S Y L K P R T K E S M Y H
301 ----+----*----+----*----+----*----+----*----+----* 350
S L T Y A T I L E M Q A M M T F D
mid16058 160 CTCCCTGACGTATGCCACCATCCTGGAGATGCAGGCCATGATGACCTTCG 209
||| ||||| |||||||||||||||||||||||||||||||||||||| |
hg00323 301 CTCACTGACATATGCCACCATCCTGGAGATGCAGGCCATGATGACCTTTG 350
S L T Y A T I L E M Q A M M T F D
351 ----+----*----+----*----+----*----+----*----+----* 400
P Q D I L L A G N M M K E A Q S
mid16058 210 ACCCCCAGGACATCCTGCTTGCTGGCAACATGATGAAAGAAGCGCAGTCG 259
|||| ||||||||||||||||| |||||||||||||| || || ||| |
hg00323 351 ACCCTCAGGACATCCTGCTTGCCGGCAACATGATGAAGGAGGCACAGATG 400
P Q D I L L A G N M M K E A Q M
401 ----+----*----+----*----+----*----+----*----+----* 450
L C Q R H R R K S S M T D S F S N
mid16058 260 CTGTGTCAGAGGCATCGAAGGAAGTCTTCTATGACGGACTCATTCAGCAA 309
|||||||||||||| || |||||||||||| | || || || |||||||
hg00323 401 CTGTGTCAGAGGCACCGGAGGAAGTCTTCTGTAACAGATTCCTTCAGCAG 450
L C Q R H R R K S S V T D S F S S
451 ----+----*----+----*----+----*----+----*----+----* 500
L V H R P T I D Q F T E E E I H A
mid16058 310 CCTGGTGCACCGTCCTACCATTGACCAGTTCACAGAAGAGGAAATCCATG 359
||||||| |||| || || | | ||| ||||| |||||||||||||| |
hg00323 451 CCTGGTGAACCGCCCCACGCTGGGCCAATTCACTGAAGAGGAAATCCACG 500
L V N R P T L G Q F T E E E I H A
501 ----+----*----+----*----+----*----+----*----+----* 550
E V C Y A E C L L Q R A A L T -
mid16058 360 CAGAGGTCTGTTATGCAGAATGCCTACTACAGAGAGCGGCCCTGACCT.. 407
| |||||||| |||||||| ||||| || ||| |||| ||||||||||
hg00323 501 CTGAGGTCTGCTATGCAGAGTGCCTGCTGCAGCGAGCAGCCCTGACCTTC 550
E V C Y A E C L L Q R A A L T F
551 ----+----*----+----*----+----*----+----*----+----* 600
mid16058 408 .................................................. 408
hg00323 551 CTGCAGGGTTCCTCACACGGAGGGGCAGTCAGGCCCAGAGCCTTGCATGA 600
L Q G S S H G G A V R P R A L H D
601 ----+----*----+----*----+----*----+----*----+----* 650
mid16058 408 .................................................. 408
hg00323 601 TCCCTCTCACGCCTGCAGCTGCCCACCTGGGCCAGGCCGTCAGCATCTTT 650
P S H A C S C P P G P G R Q H L F
651 ----+----*----+----*----+----*----+----*----+----* 700
L Q D E N M V S F I K G G I K
mid16058 408 ...TCCTGCAGGACGAGAACATGGTGAGCTTCATCAAGGGCGGCATCAAA 454
|||||||||||||||||||||||||||||||||| ||||||||||||
hg00323 651 TCCTCCTGCAGGACGAGAACATGGTGAGCTTCATCAAAGGCGGCATCAAA 700
L L Q D E N M V S F I K G G I K
701 ----+----*----+----*----+----*----+----*----+----* 750
V R N S Y Q T Y K E L D S L V Q S
mid16058 455 GTGCGGAACAGCTACCAGACTTACAAGGAACTGGATAGCCTCGTCCAGTC 504
|| || |||||||||||||| |||||||| ||||| ||||| || |||||
hg00323 701 GTTCGAAACAGCTACCAGACCTACAAGGAGCTGGACAGCCTTGTTCAGTC 750
V R N S Y Q T Y K E L D S L V Q S
751 ----+----*----+----*----+----*----+----*----+----* 800
S Q Y S K G E S H R H F E G G V K
mid16058 505 CTCGCAATACTCTAAGGGAGAGAGCCACAGACACTTTGAAGGAGGGGTGA 554
||| ||||||| ||||| |||| |||| |||||||||||||| ||||
hg00323 751 CTCACAATACTGCAAGGGTGAGAACCACCCGCACTTTGAAGGAGGAGTGA 800
S Q Y C K G E N H P H F E G G V K
801 ----+----*----+----*----+----*----+----*----+----* 850
L G V G A F N L T L S M L P T R
mid16058 555 AGCTTGGCGTAGGAGCCTTCAACCTGACGCTGTCCATGCTTCCCACCAGG 604
||||||| ||||| |||||||||||||| |||||||||||||| || |||
hg00323 801 AGCTTGGTGTAGGGGCCTTCAACCTGACACTGTCCATGCTTCCTACTAGG 850
L G V G A F N L T L S M L P T R
851 ----+----*----+----*----+----*----+----*----+----* 900
I L R L L E F V G F S G N K D Y G
mid16058 605 ATTCTGAGGCTGCTGGAGTTTGTTGGGTTTTCAGGAAACAAGGACTATGG 654
|| ||||||||| |||||||||| ||||||||||||||||||||||||||
hg00323 851 ATCCTGAGGCTGTTGGAGTTTGTGGGGTTTTCAGGAAACAAGGACTATGG 900
I L R L L E F V G F S G N K D Y G
901 ----+----*----+----*----+----*----+----*----+----* 950
L L Q L E E G A T G H S F R A V L
mid16058 655 GCTGCTGCAGCTGGAGGAGGGCGCAACCGGACACAGCTTCCGTGCAGTGC 704
||||||||||||||||||||| || | || ||||||||||| | ||||
hg00323 901 GCTGCTGCAGCTGGAGGAGGGAGCGTCAGGGCACAGCTTCCGCTCTGTGC 950
L L Q L E E G A S G H S F R S V L
951 ----+----*----+----*----+----*----+----*----+----* 1000
C V M L L L C Y H T F L T F V L
mid16058 705 TGTGCGTCATGCTGTTGCTGTGTTATCACACCTTCCTCACCTTCGTGCTC 754
| || |||||||| ||||||| || ||||||||||||||||||||||||
hg00323 951 TCTGTGTCATGCTCCTGCTGTGCTACCACACCTTCCTCACCTTCGTGCTC 1000
C V M L L L C Y H T F L T F V L
1001 ----+----*----+----*----+----*----+----*----+----* 1050
G T G N V N I E E A E K L L K P Y
mid16058 755 GGTACTGGGAATGTCAACATCGAGGAGGCAGAGAAGCTGCTGAAGCCCTA 804
||||||||||| ||||||||||||||||| |||||||| ||||||||||
hg00323 1001 GGTACTGGGAACGTCAACATCGAGGAGGCCGAGAAGCTCTTGAAGCCCTA 1050
G T G N V N I E E A E K L L K P Y
1051 ----+----*----+----*----+----*----+----*----+----* 1100
L N R Y P K G A I F L F F A G R I
mid16058 805 CCTGAACCGATACCCCAAGGGCGCCATCTTCCTGTTCTTTGCTGGGCGGA 854
||||||||| ||||| ||||| |||||||||||||||||||| ||| |||
hg00323 1051 CCTGAACCGGTACCCTAAGGGTGCCATCTTCCTGTTCTTTGCAGGGAGGA 1100
L N R Y P K G A I F L F F A G R I
1101 ----+----*----+----*----+----*----+----*----+----* 1150
E A I K G N I D -
mid16058 855 TTGAAGCTATCAAAGGAAATATTGATGC...................... 882
|||||| || ||||| || ||||||||
hg00323 1101 TTGAAGTCATTAAAGGCAACATTGATGCAGTGAGTGATGGGGGTCCGGGC 1150
E V I K G N I D A V S D G G P G
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mid16058 883 .................................................. 883
hg00323 1151 CGGGGCTGGGGATCCCTCGGGGTCTCCCAGACCAGCAGGAAGTCAGGCAC 1200
R G W G S L G V S Q T S R K S G T
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mid16058 883 .................................................. 883
hg00323 1201 ATGTGACATACTCAGGGACAGGATAGACTGGGGGCGGGGGGGGGGGCCAA 1250
C D I L R D R I D W G R G G G P R
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mid16058 883 .................................................. 883
hg00323 1251 GAGAGAACCAACCAGAGAGCAGGGGCAGGAGAGGCCCTTCTGGCAGAGCA 1300
E N Q P E S R G R R G P S G R A
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mid16058 883 .................................................. 883
hg00323 1301 GCCTGGGAAGACAAGGGAGGAGGAGGCATTTGTGGTGCCTGGGATTTTGA 1350
A W E D K G G G G I C G A W D F D
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mid16058 883 .................................................. 883
hg00323 1351 CTGGGAGATATAGGACTGCAGCATTGCAGTGGAGGGAGGTGGAGGGAGGT 1400
W E I *
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mid16058 883 .................................................. 883
hg00323 1401 GCTTGAGGGAGGCAGAGGTTAGGAAAGCCCATCTGTTTAGGGCATGACGA 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mid16058 883 .................................................. 883
hg00323 1451 TTAGGCTGGAGTCTGGTACCTCCCCTCCATTATAGCTCTCTCCTGCTCTT 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mid16058 883 .................................................. 883
hg00323 1501 TCATTTTGTTACTAAAAACCAGAGTCCTAGGCGGGGGCTGTATTTGAGCC 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mid16058 883 .................................................. 883
hg00323 1551 CAACGTCATGTAAGACTTAGGAGGTAAAACCAGGACTGGAGGCCAGATCT 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mid16058 883 .................................................. 883
hg00323 1601 CCTGGCTCCTGGGGCCCCACCTGAGCCTAGCACAGGGCTGGACCACTATG 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mid16058 883 .................................................. 883
hg00323 1651 CCCTGGAGGAGTCCCGGTCTGCTGTGGTGTTGGGAGGTTCGGAGGATGCA 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mid16058 883 .................................................. 883
hg00323 1701 GAGGGGTTGGGGCTGGGTGGGCACCCGTCAGGCTGACCAGAAGGTGCCTG 1750
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mid16058 883 ..TGCTGTCCGGCGGTTTGAGGAGTGCTGCGAGGCCCAGCAGCACTGGAA 930
|| ||||||| || ||||||||||| ||||||||||||||||||||
hg00323 1751 CAGGCCATCCGGCGTTTCGAGGAGTGCTGTGAGGCCCAGCAGCACTGGAA 1800
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mid16058 931 GCAGTTTCACCACATGTGCTACTGGGAGCTGATGTGGTGCTTTACCTACA 980
|||||| ||||||||||||||||||||||||||||||||||| |||||||
hg00323 1801 GCAGTTCCACCACATGTGCTACTGGGAGCTGATGTGGTGCTTCACCTACA 1850
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mid16058 981 AGGGCCAGTGGAAAATGGCCTACTTCTACGCCGACCTGCTGAGCAAGGAG 1030
||||||||||||| ||| |||||||||||||||||||||| |||||||||
hg00323 1851 AGGGCCAGTGGAAGATGTCCTACTTCTACGCCGACCTGCTCAGCAAGGAG 1900
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mid16058 1031 AACTCCTGGTCCAAGGCCACCTACATCTACATGAAGGCTGC......... 1071
|||| ||||||||||| || | || || | ||
hg00323 1901 AACTGCTGGTCCAAGGTGGGCTGATGCCACGTGTTAGGGGCATTGGGTGA 1950
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mid16058 1072 .................................................. 1072
hg00323 1951 CCAGGGCTGACTGTGTGCCTCCAGACCACGGGCCAAATCCCTAACTGAAC 2000
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mid16058 1072 .................................................. 1072
hg00323 2001 ACAGATGTCTCAGCTGGAATCTAAACATAACCTTAAATTCTAATAGGACT 2050
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mid16058 1072 .................................................. 1072
hg00323 2051 CAGGCTTGGAAGGAACTAAAGACCACAAGAGAAACTTCTGAACCACAATG 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mid16058 1072 .................................................. 1072
hg00323 2101 TGTCACAAAGAGATTTCTAGTCACAAAGGACAGAAACATGGCTCCCTCTG 2150
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mid16058 1072 .................................................. 1072
hg00323 2151 TCCAGTAGAACTGTTTCTGTGGTAGAAATGTTCTACTTATGCACTGCCCA 2200
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mid16058 1072 .................................................. 1072
hg00323 2201 AATATGGTAGTCACCAGCCACATGTGCACACTGAGCACATGAAATGTGCC 2250
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mid16058 1072 .................................................. 1072
hg00323 2251 TAGTGCAACTGGGAAACTGATTGTTTTCAGTTTTATTTAATTTTAATTAA 2300
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mid16058 1072 .................................................. 1072
hg00323 2301 CTAAATGTTAAATTTAAATAGCCATGTAGGGCTTGTGGCCACTATATTGG 2350
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mid16058 1072 ...............................CTACCTCAGCATGTTTGGG 1090
|| || | ||| ||||
hg00323 2351 ACTATGCAGGTCCAAAACACAAAAGGCTCATATAACTGAACATTCTTGGC 2400
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mid16058 1091 AAGGAAGACTACAAGCCATTCGGGGACAATGAAGTGGAGTTAT....... 1133
| |||| || | | || | | ||| | | | ||
hg00323 2401 ACATCCGACTTCAGGTAGGGCTGGATCCAGGAATTCAAATGATGTCGTCT 2450
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mid16058 1134 .................................................. 1134
hg00323 2451 GGCTTGGTCTTTCCATTTGTGGCTGTGCTCTCTCCTATGACATCTTTGTT 2500
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mid16058 1134 .................................................. 1134
hg00323 2501 TCTGCTGCATCTTTGCAGGAAGGTTCTCTCCATGTGACAGGCAAGGTGGC 2550
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mid16058 1134 .................................................. 1134
hg00323 2551 CACGGGCTGCTTCTACTCATATCCTCCCCTTGGTTTCAACCAGAGTCCCA 2600
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mid16058 1134 .................................................. 1134
hg00323 2601 CAGTTTGAGCCTCACTGGTCTGACTTGTCACCTGCCAATGCCTGGAACAG 2650
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mid16058 1134 .................................................. 1134
hg00323 2651 AGGGGTGGGAAGATTCCTCATGGGCTGAGAGTAGGAGAGGGGTGGTTCCA 2700
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mid16058 1134 .................................................. 1134
hg00323 2701 CAGAAGAAAATGATGCACCCAGAAATAGTGGAGGGATTAACAAGATGCCA 2750
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mid16058 1134 .................................................. 1134
hg00323 2751 TACAGGCAAAACAAAGCCAAACAGATGCCCGCCTACCAAAGATGAAATTT 2800
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mid16058 1134 .................................................. 1134
hg00323 2801 ATCATGGTAAGTATTGAAATAAGTGTTAGCTTGTACCATCATAGTAATGA 2850
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mid16058 1134 .................................................. 1134
hg00323 2851 TAGTGCAGAAATTGGAACCAAGAGTCTTACAACCACCTAGCTCAGCAAAC 2900
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mid16058 1134 .................................................. 1134
hg00323 2901 GTCTAATCTGTTATTTGTAAATACACAGGACATGTGTCTTCATGGCTTCA 2950
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid16058 1134 .................................................. 1134
hg00323 2951 TCCCCTGCCCATGGCAGACATTGCTAATCAATCCTCTGCCATGAGCCTAG 3000
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid16058 1134 .................................................. 1134
hg00323 3001 CTGTGACCTTAGATACCTTCCCTGCAAAGCTCCAGGCAGCCGTTAGAACT 3050
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid16058 1134 .................................................. 1134
hg00323 3051 GACCCACATTGGCACCTGTTAGGAGACCTGTCATCTGCATCTGGTCCCTC 3100
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid16058 1134 ...................TCAGGGCCGT.GCCAGGCTTGAAGCTCAAGA 1163
|| |||| ||| || || | ||||
hg00323 3101 CCCCTCCTCTGCATGGAGGTCTCTTCCGTAGCCCTGCCTGGGGACCAAGC 3150
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid16058 1164 TTGCTGGGAAATCTCTACCCACAGAGAAGTTTGCTATCCGGAAG...... 1207
| ||||| ||||| | | || | | | |||||
hg00323 3151 TGAAGGGGAATTCTCTGGGTCTGGGGCAGGTGGGGCTGGGGAAGGGAGCA 3200
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid16058 1208 .................................................. 1208
hg00323 3201 GGCTTCTACTGAGCTCTCAACATGTCTGGCACCTGTCATGTCCTCCACAC 3250
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid16058 1208 .................................................. 1208
hg00323 3251 CACACCCAGTGAGGAGAAGTTATTATCTCCATTGGGCACATGAGGGCCAC 3300
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid16058 1208 .................................................. 1208
hg00323 3301 TGATGCTAAGCGAGGACTGTGACTTTCCCACCCACATGGCTGTTGGTGAC 3350
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mid16058 1208 .................................................. 1208
hg00323 3351 AGACACCGGATTTGAGGACAGTCCTGTGTGACTCAGAGGCCTCTGCTTCT 3400
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mid16058 1208 .................................................. 1208
hg00323 3401 CTCTTGCTCCTAGAGTCCTCCTGAGGAGTCGGGGCTTGCCCTGAGCCCAC 3450
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mid16058 1208 ........TCCAGGCGCTACCTCTCCCCCAACCCC............... 1234
| ||| ||| |||| |||| | ||
hg00323 3451 CCTGCTGTTGAAGGTGCTTCCTCAGGCCCAGCTCCCATGGCCCCCACACC 3500
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mid16058 1235 .................................................. 1235
hg00323 3501 CCCTCCTCATCACCTCCTACTCCCAAAAAGGACAAAGCCTCAGGGAACCT 3550
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mid16058 1235 .................................................. 1235
hg00323 3551 TTTTTCTTTTTTTAGAGACGGGGTCTTGCTATGTTGGTCAGGCTGGTCTT 3600
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mid16058 1235 ...................ATCTCCTTGCCGATCCCTGCT......CTGG 1259
|||| | ||| | ||| || ||||
hg00323 3601 GAACTCCTGGGCCCAGGCAATCTTCCCGCCTCTGCCTCCTAAAGTGCTGG 3650
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mid16058 1260 AAATGATGTACATCTGGAATGGCTATGCTGTGATTGGGAAGCAGCCGACA 1309
| | | | | |||| | || ||| | || || |
hg00323 3651 GATTCTGGGCCTTAGGGAACCTTTTTGAACTGAAAGTGACGCTCGAAGCC 3700
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mid16058 1310 CTCACG........GATGGGATGCTGGAGGTCATCACCAAGGCTGAAGAG 1351
|| | | |||| ||||| | | | || | || | |||
hg00323 3701 TTCCTGTAGAGTGAGGTGGGTGGCTGGGGCTAACCA.TATGGGGAAGGAG 3749
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mid16058 1352 ATGCTGGCAATGGGCCCAGAG............................. 1372
| | | |||| || ||
hg00323 3750 AGACCTGGTGGGGGCACACAGCTGCTATATAGAGGAACAGAAGGTGGGCC 3799
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mid16058 1373 .................................................. 1373
hg00323 3800 AGGCCTCCCAGCTGTCAGGAAATCTGGCTCAGTCCCCAGACCGCTGTGTG 3849
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mid16058 1373 ...........................AATGAGTACTCAGCAGATGACGA 1395
| |||| | |||| ||
hg00323 3850 GCTTTGGGGTGGCCAGTCCCTCTCTCTCTGCAACACTCTCCTCATGAGGA 3899
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mid16058 1396 CTGCTTGGTTAAATTGCTG............................... 1414
|| || | |||| | |
hg00323 3900 CTTCTGTGAAAAATGGGGGTTGTAACCCTCTGAGTTCTGGGGCCCCACCC 3949
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mid16058 1415 .................................................. 1415
hg00323 3950 ATTTCTAATCTCCAGAACTTGGCCACCACAGACTCCACCAACTTCTAGTC 3999
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mid16058 1415 .................................................. 1415
hg00323 4000 CTGGGGCCTGGGCCTCTGGCCATTGCCATAGGCACCACCTGCTCTGTGCA 4049
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mid16058 1415 .................................................. 1415
hg00323 4050 GGCAGCGCCCCCCTCTGCCAGGATCCTCCGAGGTCAGCTGCTGGGTCTGA 4099
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mid16058 1415 ............................................AAAGGC 1420
| ||||
hg00323 4100 CCCGCAGACCCTGGCTGAGCGACGGATGAACGGAGTATGCAGACACAGGC 4149
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mid16058 1421 CTGTGTCTGA.AATACCTGGGCCGAATCCAGGAGGCAGAGGAGAATTTCA 1469
|| | | | | | ||| | | | ||| ||| | | ||
hg00323 4150 TTGCTTGTCAGCAGATGGGGGACCCCTGCCAGAGTCAGCAGCGGCCCCCA 4199
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mid16058 1470 GGAGCATTTC........................................ 1479
||| | |
hg00323 4200 TAAGCCTGCCACGCTTGCATTTATTTAGTACAGATGTAATGACAAAGGCC 4249
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mid16058 1480 .................................................. 1480
hg00323 4250 TAAAGCAAACTCCATTTGTGGGTAATTAACATTGTCGCCCCCCCAGAAAG 4299
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mid16058 1480 ......................................TGCCAATGAAAA 1491
||| | | |||
hg00323 4300 AGCAGTCCTCCGCATGATGATTAAAGGCCAGGTTCCGAGGCCTAAGTAAA 4349
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mid16058 1492 GAAGATTAAATATGACCATTACTTGATTCCAAATGCCCTACTGGAACTG. 1540
| ||| || | ||| | | | | | | ||||| | |
hg00323 4350 CCAACTTATCTAGATCAATTCCCTTACTTCTTGTTATCTACTCTGAGAGA 4399
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mid16058 1541 .................................................. 1541
hg00323 4400 ATTCAGCTGCCTTCAGCCAAATCCTTTCCCGAAGCTTTTGCAAAACCTCC 4449
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mid16058 1541 .........................................GCCCTGCTA 1549
|||||
hg00323 4450 GAGCCTTCCAAGGTTTGCTTCTTTCTGTAATTTTTCTCACCACCCTGACC 4499
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mid16058 1550 TTTATGGAGCAAGGCAGAAATGAGGAGGCCATCAAACT............ 1587
| | | || || ||| || ||||||| | |
hg00323 4500 TATCTCCTGC.AGTCAGCCCTGTGGAGGCCTTTGTGTTTCCCCCAGTGCT 4548
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mid16058 1588 .....CTTAGAGTCTGCAAAGCAAAACTACAAGAACTACTCCATGGAGT. 1631
| ||||| ||| | | | ||||| | ||| ||
hg00323 4549 GGCAGCCTAGAGGCTGAGATGGCCAGAAACAAGGTGGTGACAGTGGCGTG 4598
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mid16058 1632 ..................CAAGGACACATTTTCGAATCCAGGCAGCCACA 1663
|||||| | | ||||||| ||| |
hg00323 4599 CTCAGGGCTTGGGAAACCCAAGGAGCTAAAGGCATGCCCAGGCAACCAAA 4648
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mid16058 1664 .................................................. 1664
hg00323 4649 GAGGACAGGAAGGCTTCTGAGGAGAGACCTCTGAGGTGGGTCTTGGAGAG 4698
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mid16058 1664 .........................................CTCCAGGCC 1672
| | || |
hg00323 4699 GAAGGACTTAGGGAGGCAGAGTGGAGGAAGTGAGAGGACACCCCAAGCCA 4748
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mid16058 1673 AGATCTTCCCTAGAAGATGGCAACAGATCTCTAGTCTCGTCAGTGTCCTT 1722
||| | || | | |||| | | | | ||| | |
hg00323 4749 AGAGGGCGGCAGGACCAAAGGCTCAGAAGCCAGGGCGCTGCAGAGGGGCT 4798
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mid16058 1723 GT.AGCTTTCTGCAGCACTCTTGGGCTGCACGATGAACAGACAGCTAGCT 1771
|| || | | | || | || || | ||| ||| ||
hg00323 4799 GTGTGCCACAGGGTGAAGAGTTTGTGTGGCAGAAGGGCAGGGGGCTTGCA 4848
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mid16058 1772 GGACAGAGCACCTGGAAACATTT....CTAAAGATCACCTCCCCTGCCCT 1817
| | || | ||| | | | | ||| | ||||
hg00323 4849 TCAGGGGTGACAGCTGCTCTTTTGTCCCAGCATAGCCCCTGTACATCCCT 4898
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mid16058 1818 GCTCTTCCTTGGGGTCCA.............................CCT 1838
| | || ||||| |||
hg00323 4899 GGAGAGCTGGGGCGTCCACAACTCTAAGTCACAGCCCCCATCCTAACCCT 4948
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mid16058 1839 GGTGCTCCAGTAGGATTGCACAAGAATATCTGTGCAGAAGCAAAGACAGC 1888
|||| | |||| | || | | | || |||| || ||||| |
hg00323 4949 GGTGGTGCAGTGAGGGTG...AGCTGTCTGTGGGCAGGAGGGAAGAC.TC 4994
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mid16058 1889 ATTTTTACCAGTGTGGCCAAAGCCTTCACACATACGGGTACTTGTTTTA. 1937
| | || ||| || | | ||| | || | | |
hg00323 4995 TTGGAGATGAGCCTGGTGAAGGGATAATGGCATCCCGGGCCGAGGAGCAG 5044
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mid16058 1938 ..............CACTGTGATGTTTAAGAGAATGTATGAACAGTTTAC 1973
| || || | ||| | || | | |
hg00323 5045 CACAGGCAGAGGCCTGGGGAGAGTTTAAGGAGTGTAGGGGAGGAAATGGC 5094
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mid16058 1974 ATTTCTTTAGAAATACATCGA............................. 1994
| | || | | | ||
hg00323 5095 AGAAGATGAGCCAGAAAAAGAAAGGTTAGGGCAGGTCCTGGAGGACATGA 5144
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mid16058 1995 ..............................................TGGG 1998
|| |
hg00323 5145 GTGGCTGTTTGGGCTTTATCCAGCAGTGGGGGAGCCTTGGCAGGCTTGTG 5194
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mid16058 1999 ATTATAATTGGTGTTTAAAAAACCAAACCA.................... 2028
| || |||| || | ||| | ||||
hg00323 5195 GCTTAGATAGGTGCTTTAGAAAGCCCACCAGCAGTTGCTGGGCCACCCCG 5244
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mid16058 2029 ..........................................AACAAACT 2036
| |||
hg00323 5245 CTGGCTGGGTCCTGTTCTAAGGCAGGAAATACAAGAATGAGCAGGAAAAG 5294
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mid16058 2037 ACCCCCCCCCTCCAAAC...............AAACAAAAGCAACCCGAC 2071
|||||| | | || || ||| || | |
hg00323 5295 ACCCCCTCAAGGCTCACGTCCTAGTGGGGAGACAAGAAACACAGATGGGC 5344
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mid16058 2072 TGCCTGGAAAGCTGTTTAGCTCCTGACCTGGAAGTTCTCTACATGCTA.. 2119
| | | ||| | | ||| | | ||| ||| || |
hg00323 5345 AATATAACACGATGTCTGGTTCCAGTAAGTGCAGTGAAGAACAAGCGAGG 5394
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mid16058 2120 ........................................TTAAAGGCCA 2129
| || |
hg00323 5395 CTGGATGCAGGGAGTGATGGGAGGGGCTTTGTAAGGGGAGGTCGGGGGAA 5444
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mid16058 2130 CACTGCTTCTCAGACCTCAGCTTTTGAGGACAGGGGTTCCTAGCATCTGA 2179
||| || || | | | ||| |||| | | | | |
hg00323 5445 GCCTGTCTCAGAGGACACCAGAATGGAGCGCAGGAGCAGCACGTGGCAGT 5494
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mid16058 2180 GTCATTGCA......................................... 2188
||| |||
hg00323 5495 CACATGGCAGGCCGTTAGGGCAGAGGGAGCTGGGCAGGGCACAGCAGGGC 5544
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mid16058 2189 .................................................. 2189
hg00323 5545 AGGAGTGTGTTTGATGTGTCCTGGGAACCGCCCTGAGGCCGTCGTGTGGC 5594
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mid16058 2189 .................................................. 2189
hg00323 5595 TGGAGTGCTGCAGGTGTCAAGGAAATTGTAGGAGATGTCTCCTGAGTGTG 5644
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mid16058 2189 .................................................. 2189
hg00323 5645 ATGGAATATAACCAGATTTCCAGAAGGAACTGACATGATCTGACTTAAAA 5694
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mid16058 2189 .................................................. 2189
hg00323 5695 AGGTCAGTGTGCGAAATGGCTTGCAGGGGACAGGAGTGGGAGCAGGGAGA 5744
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mid16058 2189 .................................................. 2189
hg00323 5745 TAGGAGACAATGTGTACCAGGACAGCAGAAAGACATCCCGGGTAGCCTGG 5794
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mid16058 2189 .................................................. 2189
hg00323 5795 AACAGGGAGACGGTGTGGAGATGGTGGCAGTCCGATAATGAGAGCCGTAG 5844
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mid16058 2189 .................................................. 2189
hg00323 5845 GGCAAGGCCAGCAGGATCCTAGAGTGAGACGGGAGGTAAAGTCACCGGGA 5894
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mid16058 2189 .................................................. 2189
hg00323 5895 CTTGGTGTCTCCACGTCAGGGGCAGGGGAAAGGGAGAGGACAAGGGTGAC 5944
5951 ----+----*----+----*----+----*----+----*----+----* 6000
mid16058 2189 .................................................. 2189
hg00323 5945 CCGGGAGGTTAAAGATGGGACCGGGGCCAGACGCAGTGGCTCATGCCTGT 5994
6001 ----+----*----+----*----+----*----+----*----+----* 6050
mid16058 2189 .................................................A 2189
|
hg00323 5995 AATCCTAGCACTTTGGGAGGCTGAGGCGGGCGGATGGCTTGAGGTCAGGA 6044
6051 ----+----*----+----*----+----*----+----*----+----* 6100
mid16058 2190 ATTCCAGGACAGCCACAGCTACGCAGTGAGACACTGGGTCCAAACAAAAT 2239
|| | | ||| | || |||| || | | || | |||
hg00323 6045 GTTTGAAACCGGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAATA 6094
6101 ----+----*----+----*----+----*----+----*----+----* 6150
mid16058 2240 AAAGCAAATTAAGTTGCT................................ 2257
| |||||| ||
hg00323 6095 TACAAAAATTAGCCTGGCGTGGTGGTGCATGCCTGCAGTCCCAGCTATTC 6144
6151 ----+----*----+----*----+----*----+----*----+----* 6200
mid16058 2258 .................................................. 2258
hg00323 6145 AGGAGGCTGAGGCGACAAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCA 6194
6201 ----+----*----+----*----+----*----+----*----+----* 6250
mid16058 2258 .................................................. 2258
hg00323 6195 GTGAGCCGAGATCGCGCCATAGCACTCCAGCCTTAGCCTGGGCGACAGAG 6244
6251 ----+----*-- 6262
mid16058 2258 ............ 2258
hg00323 6245 CGAGACCACATC 6256