FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0685.ptfa, 814 aa vs ./tmplib.26680 library 1768203 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.1328+/-0.00532; mu= 6.0693+/- 0.353 mean_var=186.5554+/-44.107, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.0939 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1558 ( 502 res) mbg17170 ( 502) 1013 150 6.8e-37 mKIAA1115 ( 774 res) mbg00401 ( 774) 614 96 1.7e-20 >>mKIAA1558 ( 502 res) mbg17170 (502 aa) initn: 882 init1: 636 opt: 1013 Z-score: 754.7 bits: 149.9 E(): 6.8e-37 Smith-Waterman score: 1240; 51.344% identity (54.728% ungapped) in 372 aa overlap (2-372:143-492) 10 20 30 mKIAA0 LQVIMFLKKKEKFISQLLKHIGTSALMDLLL :.. :::::. :.. ..:::::::.::::: mKIAA1 SFLLNESPLNPLLASFFSKVLSILISRKPEQIVDFLKKKRDFVDLIIKHIGTSAIMDLLL 120 130 140 150 160 170 40 50 60 70 80 90 mKIAA0 RLVSCVEPVGLRQEVLHWLNEEKIIQRIVALIHPHQDEDRQSNASQALCDIIRLGRDQGS ::..:.:: ::.::.:::::.::::.: ..:: :.:::.:::::.::.:.::.::: mKIAA1 RLLTCIEPPQPRQDVLNWLNEERIIQRLVEIVHPSQEEDRHSNASQSLCEIVRLSRDQML 180 190 200 210 220 230 100 110 120 130 140 150 mKIAA0 QLQETVEPDPLLITLESQDCVEQLLKNMFDGDQTESCLVSGMQVLLALLEPRRVGTEGLV :.:...:::::: :::.:. .::::.:.: ...:: .::..:.::.::: :: :: . mKIAA1 QVQNSTEPDPLLATLEKQEIIEQLLSNIFHKEKNESAIVSAIQILLTLLETRRPTFEGHI 240 250 260 270 280 290 160 170 180 190 200 210 mKIAA0 DSFSQGLERSH-SVSSSILRGIEPWLKNFHQLLLNPPKKKAILTTIGVLEEPLGNARLHG . :. .: ::..:.:..:. : .::.:::.::::... :: :.:. :.::.::. mKIAA1 EICPPGMSHSACSVNKSVLEAIRGRLGSFHELLLEPPKKSVMKTTWGILDPPVGNTRLNV 300 310 320 330 340 350 220 230 240 250 260 270 mKIAA0 ARLMAALLHTNTPGINQELCRLNTMDLLLDLFFKYTWNNFLHLQVELCIAAILSHAAREE ::...::.::: .:: .: .::.. ..::.::::::::::: :::.::: :: :. : mKIAA1 IRLISSLLQTNTSSINGDLMELNSIGVILDMFFKYTWNNFLHTQVEICIALIL--ASPFE 360 370 380 390 400 410 280 290 300 310 320 330 mKIAA0 QAEASGSDGKVEPLQGSGDGNGKLETTPSITSPPENTMVTHLFQKCCLVQRILEAWEAND .:: .: . ...:: : .. :::::: :..::::::..:. mKIAA1 NAE----NGTITDQDSTGD----------------NLLLKHLFQKCQLIERILEAWDTNE 420 430 440 450 340 350 360 370 380 390 mKIAA0 HTQAAGGMRRGNMGHLTRIANAVVQNLEQGPVQAHISEVIRGLPADCRGRWESFVEETLM . :: :: :.: ::::::::: .:.. ..:: .: ....:.: mKIAA1 KKQAEGGRRHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKGKLVNNLITCV 460 470 480 490 500 400 410 420 430 440 450 mKIAA0 ETNRRNTVDLVSTHHLHSSSEDEDIEGTFPNELSLQQAFSEYQIQQMTANFVDQFGFNDE >>mKIAA1115 ( 774 res) mbg00401 (774 aa) initn: 1556 init1: 614 opt: 614 Z-score: 460.4 bits: 96.0 E(): 1.7e-20 Smith-Waterman score: 1291; 36.684% identity (47.386% ungapped) in 766 aa overlap (2-740:152-771) 10 20 30 mKIAA0 LQVIMFLKKKEKFISQLLKHIGTSALMDLLL :.. ::.::. :.. ::.::::::.::::: mKIAA1 GFLQSGDSLNPLLASFFSKVMGILINRKTDQLVSFLRKKDDFVDLLLRHIGTSAIMDLLL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA0 RLVSCVEPVGLRQEVLHWLNEEKIIQRIVALIHPHQDEDRQSNASQALCDIIRLGRDQGS ::..::: :::.:..:::::::.::.. ::: .:....:::::.:::::::.:.: mKIAA1 RLLTCVERPQLRQDVFNWLNEEKIVQRLIEQIHPSKDDNQHSNASQSLCDIIRLSREQMI 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA0 QLQETVEPDPLLITLESQDCVEQLLKNMFDGDQTESCLVSGMQVLLALLEPRRVGTEGLV : :.. ::: :: :::.:. .::::.:::.:.: .: .:::.::::.:::::: mKIAA1 QGQDSPEPDQLLATLEKQETIEQLLSNMFEGEQCQSVIVSGIQVLLTLLEPRR------- 250 260 270 280 290 160 170 180 190 200 210 mKIAA0 DSFSQGLERSHSVSSSILRGIEPWLKNFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGA :: ::. ..:: .. . : . :.:.. :.. :: mKIAA1 -------PRSDSVT----------MNNF----FSSVDGQLELLAQGALDNALSSM---GA 300 310 320 330 220 230 240 250 260 270 mKIAA0 RLMAALLHTNTPGINQELCRLNTMDLLLDLFFKYTWNNFLHLQVELCIAAILSHAAREEQ ::. : ::. . :: mKIAA1 ------LHALRP-------RLDRFHQLL-------------------------------- 340 280 290 300 310 320 330 mKIAA0 AEASGSDGKVEPLQGSGDGNGKLETTPSITSPPENTMVTHLFQKCCLVQRILEAWEANDH :: ::. ..:.:.: ::.::: .:: ::. mKIAA1 ----------------------LE-------PPK----VQLLQHCRLVERILASWEENDR 350 360 370 340 350 360 370 380 390 mKIAA0 TQAAGGMRRGNMGHLTRIANAVVQNLEQGPVQAHISEVIRGLPADCRGRWESFVEETLME .:..:: :.: ::::::.::::::: :::: ....... :: . . :::.:: : : mKIAA1 VQSGGGPRKGYMGHLTRVANAVVQNAEQGPNAEQLGQLLKELPEEQQQRWEAFVSGPLAE 380 390 400 410 420 430 400 410 420 430 440 mKIAA0 TNRRNTVDLVSTHHLHSSSEDED---IEGTFPNELSLQQAFSEYQIQQMTANFVDQFGFN ::..::::::.::::::::.::: : .::.: ::::: ..:.:.::. :.:.:::: mKIAA1 TNKKNTVDLVNTHHLHSSSDDEDDRLKEFNFPEEAVLQQAFMDFQMQRMTSAFIDHFGFN 440 450 460 470 480 490 450 460 470 480 490 500 mKIAA0 DEEFADQDDNINAPFDRIAEINFNIEADEDSPSAALFEACCSDRIQPFDDDEEED----- ::::..:....:::::. :.:.:...::...:.: :.: : .:::: :::.:::. mKIAA1 DEEFGEQEESVNAPFDKTANITFSLNADDENPNANLLEICYKDRIQQFDDEEEEEEEGQG 500 510 520 530 540 550 510 520 530 540 550 mKIAA0 ---------IWEDDETRCAARVMARARFGAPHVSDNYSKNALEHGGQDRKTGSAVARNVP :. .. :... . .:. .. : .: . :.: .:. : mKIAA1 SAESDGEYGAWQGSQPVRASQASQPPGVRSGGSTDSEEEDEEEDEEED-EGGAACGRTSP 560 570 580 590 600 610 560 570 580 590 600 610 mKIAA0 GLAAPSSPTQKEGPRSESDSAGTTWTAVFDE-PVNPLSATPGAARDVGSSAWAAGPSVVE . . :: :: :: .:::.:: :.. .. : . . :: :: mKIAA1 S-SFPSPSTQPPGP---------SWTATFDTVPMDAPTGPPVSKEADMSSIQI--PSSPP 620 630 640 650 620 630 640 650 660 670 mKIAA0 EKGWAKFTDFQPFCCSETGPRCSSPVDMDHSNAEGGQSPGPEKTFGPTSPCAWNVCVT-- .: .. . .: : : :.: .. :. :. : .:: : :. mKIAA1 AHGSPQLRSQDP-----THP--SAPQEVTDSS----------KVAEPLAPCQALVSVADV 660 670 680 690 700 680 690 700 710 720 mKIAA0 -------RKAPLVASDSSSSGGSDSEDDEKAAGAVEAVCTGHTGKVSPPPRTAEAAVGRA :.:: . ::.. : : : :: . ... :: :: . . mKIAA1 QATLHGMRSAP-SSLDSATRDPSTSVPDFKAHQSPQTM----EGKRSPEHLGLPQSQSAL 710 720 730 740 750 730 740 750 760 770 780 mKIAA0 ECPDSTVLAPACPAPSEVTISPAVATIAPSKAGSPTATIVVSSSVAAAVPPGPIVAVTTA : :.... :. : : mKIAA1 EMPNGST--PGGPISSGSQ 760 770 814 residues in 1 query sequences 1768203 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:26:10 2006 done: Mon Mar 27 10:26:11 2006 Scan time: 0.920 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]