Comparison of KIAA cDNA sequences between mouse and human (KIAA0039)
<<Original sequence data>>
mouse mKIAA0039 (mid11031) length: 2954 bp, CDS: 1 - 1413
human KIAA0039 (ha02030) length: 3430 bp, CDS: 1 - 1476
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 49 - 1476 1226 191 13.5
3'UTR: 1477 - 3277 1021 517 33.6
amino acid
CDS: 49 - 1476 396 80 16.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
E
mid11031 1 ................................................GA 2
ha02030 1 AGACGTTTCCCGCCGGCGGGAGCTGTGGCTGTGATTGAGAGAGGGGTTAG 50
R R F P P A G A V A V I E R G V R
51 ----+----*----+----*----+----*----+----*----+----* 100
R G A R S R T T M A E Q L Y L E N
mid11031 3 GCGCGGGGCTCGAAGCCGCACCACCATGGCGGAACAGCTGTATCTAGAAA 52
||||| | | || || |||||||||||| ||||| ||||| ||||
ha02030 51 AGGCGGGTCCCAGCGCTGCCGCACCATGGCGGACCAGCTTTATCTGGAAA 100
G G S Q R C R T M A D Q L Y L E N
101 ----+----*----+----*----+----*----+----*----+----* 150
I D E F V T D Q N K I V T Y K W
mid11031 53 ACATAGACGAGTTCGTCACGGACCAGAACAAGATCGTGACTTACAAGTGG 102
| ||||||||||||||||||||||| |||||||||||||| ||||| |||
ha02030 101 ATATAGACGAGTTCGTCACGGACCAAAACAAGATCGTGACATACAAATGG 150
I D E F V T D Q N K I V T Y K W
151 ----+----*----+----*----+----*----+----*----+----* 200
L S Y T L G V H V N Q A K Q M L Y
mid11031 103 CTAAGCTATACACTAGGGGTTCATGTTAACCAGGCCAAACAGATGCTCTA 152
|| |||||||||||||||||||||||||||||||||||||||||||| ||
ha02030 151 CTGAGCTATACACTAGGGGTTCATGTTAACCAGGCCAAACAGATGCTGTA 200
L S Y T L G V H V N Q A K Q M L Y
201 ----+----*----+----*----+----*----+----*----+----* 250
E Y V E R K R K E N S G A Q L H V
mid11031 153 TGAATATGTTGAAAGGAAACGGAAAGAAAATTCGGGAGCTCAGCTGCATG 202
||| ||||||||||||||||| ||||||||||| ||||| || |||||||
ha02030 201 TGATTATGTTGAAAGGAAACGAAAAGAAAATTCAGGAGCCCAACTGCATG 250
D Y V E R K R K E N S G A Q L H V
251 ----+----*----+----*----+----*----+----*----+----* 300
T Y L V S G S L I Q N G H S C H
mid11031 203 TTACCTACTTGGTGTCTGGCAGTCTTATACAGAACGGACATTCTTGCCAC 252
||||||||||||||||||||||||| || ||||| |||||||| ||||||
ha02030 251 TTACCTACTTGGTGTCTGGCAGTCTCATTCAGAATGGACATTCCTGCCAC 300
T Y L V S G S L I Q N G H S C H
301 ----+----*----+----*----+----*----+----*----+----* 350
K V A V V R E D K L E A V K S K L
mid11031 253 AAGGTTGCAGTAGTGAGAGAAGATAAACTGGAAGCAGTGAAGTCCAAGTT 302
||||||||||||||||||||||||||| |||||||||||||||||||| |
ha02030 301 AAGGTTGCAGTAGTGAGAGAAGATAAATTGGAAGCAGTGAAGTCCAAGCT 350
K V A V V R E D K L E A V K S K L
351 ----+----*----+----*----+----*----+----*----+----* 400
A V T A S I H V Y S I Q K A M L K
mid11031 303 AGCTGTGACTGCCAGCATCCATGTGTACAGCATCCAGAAAGCTATGCTAA 352
|||||||||||||||||||||||||||||||||||||||||| |||||||
ha02030 351 AGCTGTGACTGCCAGCATCCATGTGTACAGCATCCAGAAAGCCATGCTAA 400
A V T A S I H V Y S I Q K A M L K
401 ----+----*----+----*----+----*----+----*----+----* 450
D S G P L F N T D Y D I L K S N
mid11031 353 AGGACAGTGGGCCTCTGTTCAATACCGACTATGACATCCTTAAAAGCAAT 402
||||||||||||||||||||||||| |||||||||||||||||||||||
ha02030 401 AGGACAGTGGGCCTCTGTTCAATACTGACTATGACATCCTTAAAAGCAAC 450
D S G P L F N T D Y D I L K S N
451 ----+----*----+----*----+----*----+----*----+----* 500
L Q N C S K F S A I Q C A A A V P
mid11031 403 TTGCAGAACTGCAGCAAGTTTAGTGCCATACAGTGTGCAGCTGCAGTCCC 452
||||||||||||||||| |||||||| ||||| ||||||||||| |||||
ha02030 451 TTGCAGAACTGCAGCAAATTTAGTGCTATACAATGTGCAGCTGCCGTCCC 500
L Q N C S K F S A I Q C A A A V P
501 ----+----*----+----*----+----*----+----*----+----* 550
R A P A E S P S S R K Y E Q S N
mid11031 453 CAGAGCTCCTGCAGAATCC...CCATCTTCCAGAAAGTATGAACAGTCAA 499
||||||||||| |||||| | ||||||| ||||| ||| ||||||
ha02030 501 TAGAGCTCCTGCTGAATCCTCTTCGTCTTCCAAAAAGTTTGAGCAGTCAC 550
R A P A E S S S S S K K F E Q S H
551 ----+----*----+----*----+----*----+----*----+----* 600
L Q A A S E A Q - S E L T T N
mid11031 500 ATCTTCAGGCAGCGAGTGAGGCACAAGC...CAGTGAGCTGACTACCAAT 546
||||||| | |||||| ||||||| || ||||||||| ||||||
ha02030 551 ATCTTCACATGTCAAGTGAGACACAAGCCAACAATGAGCTGACCACCAAT 600
L H M S S E T Q A N N E L T T N
601 ----+----*----+----*----+----*----+----*----+----* 650
G H G P P A S K Q A S Q Q P K G I
mid11031 547 GGCCATGGTCCACCTGCCTCCAAACAGGCTTCCCAGCAGCCCAAAGGAAT 596
|| ||||| |||||||| ||||| |||| |||||||||||||||||||||
ha02030 601 GGTCATGGCCCACCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAAGGAAT 650
G H G P P A S K Q V S Q Q P K G I
651 ----+----*----+----*----+----*----+----*----+----* 700
M G M L I S K A A T K T Q D T N K
mid11031 597 TATGGGAATGTTAATCTCTAAAGCTGCTACTAAAACCCAGGACACCAACA 646
|||||||||||| ||| ||||||||| |||||||||| || |||||||
ha02030 651 TATGGGAATGTTTGCCTCCAAAGCTGCTGCTAAAACCCAAGAAACCAACA 700
M G M F A S K A A A K T Q E T N K
701 ----+----*----+----*----+----*----+----*----+----* 750
E T K P E A R E V T S A S S A G
mid11031 647 AGGAAACCAAACCAGAGGCCCGAGAAGTAACCAGTGCATCTTCTGCTGGG 696
||||||| ||| ||||||| ||||||||| | ||||||| | || ||
ha02030 701 AGGAAACGAAAACAGAGGCTAAAGAAGTAACAAATGCATCTGCAGCAGGC 750
E T K T E A K E V T N A S A A G
751 ----+----*----+----*----+----*----+----*----+----* 800
G K A P G K G S V M S N F F G K A
mid11031 697 GGCAAAGCACCAGGAAAAGGGAGTGTGATGAGCAACTTTTTTGGAAAAGC 746
||| |||||||| ||||||| | |||||||||||||||||||||||||
ha02030 751 AACAAGGCACCAGGGAAAGGGAATATGATGAGCAACTTTTTTGGAAAAGC 800
N K A P G K G N M M S N F F G K A
801 ----+----*----+----*----+----*----+----*----+----* 850
A M N K L K V N L D S E Q A V K E
mid11031 747 TGCAATGAATAAACTTAAAGTCAATTTGGATTCAGAACAAGCAGTAAAGG 796
||| ||||||||| |||||||||||||||| |||||||||||||| || |
ha02030 801 TGCTATGAATAAATTTAAAGTCAATTTGGACTCAGAACAAGCAGTGAAAG 850
A M N K F K V N L D S E Q A V K E
851 ----+----*----+----*----+----*----+----*----+----* 900
E K T V E Q P P V S V T E P K L
mid11031 797 AAGAAAAAACAGTGGAGCAACCTCCAGTGTCTGTCACTGAACCAAAGCTG 846
||||||||| ||||||||| ||| ||||||||||||| ||||||||||||
ha02030 851 AAGAAAAAATAGTGGAGCAGCCTACAGTGTCTGTCACGGAACCAAAGCTG 900
E K I V E Q P T V S V T E P K L
901 ----+----*----+----*----+----*----+----*----+----* 950
A A P P A Q K K S S R K S E P G K
mid11031 847 GCAGCTCCCCCAGCTCAGAAGAAATCCAGCAGAAAGTCCGAGCCTGGGAA 896
||| |||| ||| | ||| |||||||||| ||| | ||||||| ||
ha02030 901 GCAACTCCTGCAGGCCTGAAAAAATCCAGCAAAAAAGCAGAGCCTGTTAA 950
A T P A G L K K S S K K A E P V K
951 ----+----*----+----*----+----*----+----*----+----* 1000
V Q Q K E K S R G K R V D L S D E
mid11031 897 GGTGCAGCAGAAGGAGAAAAGCAGGGGCAAGCGAGTAGACTTGTCGGATG 946
||||| ||||||||| |||| ||||| |||||||||| || || ||||
ha02030 951 GGTGCTGCAGAAGGAAAAAAAAAGGGGGAAGCGAGTAGCATTATCTGATG 1000
V L Q K E K K R G K R V A L S D D
1001 ----+----*----+----*----+----*----+----*----+----* 1050
E A K E T E H L K K K R R R I K
mid11031 947 AGGAGGCAAAGGAAACCGAACACCTGAAGAAAAAGAGAAGAAGAATCAAG 996
| ||| |||||||||| ||| || ||| ||||||||| |||||||||||
ha02030 1001 ATGAGACAAAGGAAACTGAAAACATGAGGAAAAAGAGGAGAAGAATCAAA 1050
E T K E T E N M R K K R R R I K
1051 ----+----*----+----*----+----*----+----*----+----* 1100
L P Q S D S S E D E V F E D S P E
mid11031 997 CTTCCTCAGTCTGATAGCAGTGAAGATGAAGTCTTCGAAGACTCCCCTGA 1046
|||||| | |||||||||||||||||||||||||| |||||| ||||
ha02030 1051 CTTCCTGAATCTGATAGCAGTGAAGATGAAGTCTTTCCAGACTCTCCTGG 1100
L P E S D S S E D E V F P D S P G
1101 ----+----*----+----*----+----*----+----*----+----* 1150
M Y E A D S P S P P P V S P P P
mid11031 1047 GATGTATGAAGCAGACTCACCATCTCCA...CCTCCTGTATCTCCACCTC 1093
| |||||||| || |||||||| ||| |||||| ||||||||||
ha02030 1101 GGCTTATGAAGCTGAGTCACCATCCCCACCTCCTCCTCCGTCTCCACCTC 1150
A Y E A E S P S P P P P P S P P L
1151 ----+----*----+----*----+----*----+----*----+----* 1200
D P M P K T E P P P V K R S
mid11031 1094 CTGATCCTATGCCAAAAACTGAG......CCCCCTCCTGTCAAGCGTTCA 1137
||| || ||||||| |||||| || ||| |||||||| | |||
ha02030 1151 TTGAACCAGTGCCAAAGACTGAGCCTGAACCTCCTTCTGTCAAGAGCTCA 1200
E P V P K T E P E P P S V K S S
1201 ----+----*----+----*----+----*----+----*----+----* 1250
S G E T K R R R K R V L K S K T F
mid11031 1138 AGTGGAGAAACCAAAAGGAGACGAAAGCGTGTACTGAAATCTAAAACCTT 1187
|||||||||| |||||| | |||||| || ||||| ||||||||||| |
ha02030 1201 AGTGGAGAAAACAAAAGAAAACGAAAACGCGTACTAAAATCTAAAACTTA 1250
S G E N K R K R K R V L K S K T Y
1251 ----+----*----+----*----+----*----+----*----+----* 1300
V D E E G C I V T E K V Y E S E S
mid11031 1188 TGTGGATGAAGAAGGCTGCATAGTGACTGAGAAAGTCTATGAGAGTGAGT 1237
|||||| |||||||||||||||||||| |||||||| |||||||| |
ha02030 1251 CCTGGATGGGGAAGGCTGCATAGTGACTGAAAAAGTCTACGAGAGTGAAT 1300
L D G E G C I V T E K V Y E S E S
1301 ----+----*----+----*----+----*----+----*----+----* 1350
C T D S E E E L K M K P A S A H
mid11031 1238 CCTGCACAGACAGTGAGGAGGAGCTTAAGATGAAGCCGGCCTCAGCACAC 1287
|||||||||| ||||| ||||||||||| |||||| | |||||| ||||
ha02030 1301 CCTGCACAGATAGTGAAGAGGAGCTTAACATGAAGACATCCTCAGTACAC 1350
C T D S E E E L N M K T S S V H
1351 ----+----*----+----*----+----*----+----*----+----* 1400
K P P A A A V K R E P R E E R K G
mid11031 1288 AAACCCCCTGCTGCCGCTGTGAAAAGGGAGCCCAGAGAAGAACGGAAGGG 1337
| ||||||||| ||||||||| || |||||||| ||||| |||||
ha02030 1351 AGACCCCCTGCCATGACTGTGAAAAAAGAACCCAGAGAGGAACGAAAGGG 1400
R P P A M T V K K E P R E E R K G
1401 ----+----*----+----*----+----*----+----*----+----* 1450
P K K G A A A L G K A N R Q V S I
mid11031 1338 CCCCAAGAAAGGGGCTGCTGCTCTGGGCAAAGCCAACAGACAAGTGTCCA 1387
||||||||||||| |||||||||||||||||||||||||||| |||||||
ha02030 1401 CCCCAAGAAAGGGACTGCTGCTCTGGGCAAAGCCAACAGACAGGTGTCCA 1450
P K K G T A A L G K A N R Q V S I
1451 ----+----*----+----*----+----*----+----*----+----* 1500
T G F F Q K K *
mid11031 1388 TTACTGGCTTCTTCCAGAAAAAGTAAA.TGCTACCTCTGAAAG......G 1430
|||||||||||||||||| || |||| ||| | ||||| || |
ha02030 1451 TTACTGGCTTCTTCCAGAGGAAATAAACTGCCATCTCTGGTAGATCAGAG 1500
T G F F Q R K *
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mid11031 1431 ACTCGGGCTGGTCAAGGGAGAAGACCAAGAAGTATAGACTGTCACTTACT 1480
||| || ||||||||||||||||||||||| | || | |||||||||
ha02030 1501 ACTTGGAGTGGTCAAGGGAGAAGACCAAGAAATGTACTC.CTCACTTACT 1549
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mid11031 1481 GTGTAAGTTTGCCTCGCTCCTTGCCTCGCCTGGATCAGATG.CTGCTCTG 1529
|||||||| || | || |||| |||| |||| | | ||| |||
ha02030 1550 ATGTAAGTTCATCTAGATCTCCACCTCACCTGTATCAAAAGACTGTTCTT 1599
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mid11031 1530 CCATCACGGGACACGTGTACCACTTCTGTTTTCTTCACCCAAAAGGAAGT 1579
|||| | || | ||| | ||||| || || | |||||||||| |
ha02030 1600 TCATCCTGTGAGGTTTATACTATTTCTGGTT..TTTAACCAAAAGGAAAT 1647
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mid11031 1580 CACCTGGAAACGGGGCAAAAGAACATTTTAAAAGCTGTTACATTGTAATA 1629
|| |||||| | || | |||||||||||| || ||||
ha02030 1648 CATCTGGAAGCAGG..........AGGCAAAAAGCTGTTACCTTCTAATG 1687
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mid11031 1630 AGTTTATAAATATAAAGCACAATCTTTGCCCTGCCTAGGAGAA....TTC 1675
| || || |||||||| |||||| |||| | ||||||| ||
ha02030 1688 ACATT.....TAAAAAGCACAGTCTTTGACCTGTCCAGGAGAAGGATTTA 1732
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mid11031 1676 ATTCAAGAATGACCTG.................................. 1691
| ||| | | |||
ha02030 1733 CTCCAAAATTATACTGGAACAGTTTTCAGAATTCTCACTGAAGCCATTTA 1782
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mid11031 1692 ...................................CTGGGCCACACTTGC 1706
|||| || || ||
ha02030 1783 GTGGCTAACCCACTGTGCTCCACTCACCCTATGCCCTGGTCCGCATATGG 1832
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mid11031 1707 CCTGCGCATGTGCCTCTCCTGGT.CTCTGTGTTCTGTGAGCGGGAGGCAG 1755
| | || | || || | |||||| |||| || | |
ha02030 1833 CACAGGAATTATTCCTTCTTGTTCCTCTGTATTCTAAGAATTCATGTGGG 1882
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mid11031 1756 TGTTTTTATTTGATGAGTTCTACTGGATGTGTTCACCGCGTCTCCACTTT 1805
||||| | | | |||| |||||| ||| ||| || |||
ha02030 1883 TGTTTCTTATCCTTACATTCTGCTGGATACGTTTACC......CCTCTTG 1926
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mid11031 1806 CCTCTCCACACTACCATACTTCTGTCCCCCGACC.CCACAATCTGTTTTC 1854
|| | || ||||| |||||||||||| ||| || | ||||| ||
ha02030 1927 TCTTCCTGCAGTACCACACTTCTGTCCCCTAACCTCCTGAGGCTGTTCTC 1976
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mid11031 1855 TGTAAATCTTTTAAGTCTTAGTCAGATGAGAAGCTAAAACTAAAATCT.T 1903
||||| |||||||||| || || || | | ||| || |||||||
ha02030 1977 TGTAAGTCTTTTAAGTTTTGGTTGGACTAAAGGCTGAAGTGAAAATCTCC 2026
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mid11031 1904 CTGTAATTCCCGATCTCCGT..TGATGTAGTGAGTGACTCAGCTCCAGGC 1951
||||||| | | |||| | || ||| | || ||| ||| |
ha02030 2027 CTGTAATCCTCTTCCTCCATTATGCAGTACACGGACACCTGGCTACAGAC 2076
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mid11031 1952 TAGGCCAGTGTGCATCGTCCAGTCCTTTCATCTCATCCGCTCCCTCTCAC 2001
||| | | | || |||||||| || |||| || ||
ha02030 2077 CAGGACGTGGCTTGTGTTCTGTTCCTTTCA...CAAAAGCTCTCTGGGAC 2123
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mid11031 2002 TTCC......................................CTCAGACT 2013
| | | || |
ha02030 2124 CTTCACTTGCAATTAGTGGTTAGGGAAAAGCCTCAGGCAGAACACAAATA 2173
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mid11031 2014 GAGATGTGCTGATGAATCCAGCCTCACCAGAAATGACTTAAAGTCA.CAT 2062
|| || | ||||| | || | |||||||||| || | ||||| |||
ha02030 2174 GAAATTTAATGATGTGTTCAACTCCACCAGAAATTACCTCGAGTCAGCAT 2223
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mid11031 2063 GGTGGCCAATGACAGAGCTGGCATGTTGCTAGCACAGGGTATGCAT.... 2108
| | | || |||||| | || |||| || |||| ||| |
ha02030 2224 TGACGATATTGGAGGAGCTGCCGTGCTGCTGATACGGGGTGTGCTTTATG 2273
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mid11031 2109 ATACTCATGTGTGGTTTCTTTCTTCCAGATTTCCTATACTTATTACCCAG 2158
| ||| | | || | || | || | || | |||| ||
ha02030 2274 CTGCTCTTTGCGGTTTGTTGATCCCCTCCTCCCCCACTCTCAATACCTAG 2323
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mid11031 2159 AGAGTGGAACCTGTACAGCGAGATGAAAGATTAAAATAAGAATGCTTTC. 2207
|||||| |||| ||||| ||||| || | |||| | ||| | |||
ha02030 2324 AGAGTGAAACCCGTACAATGAGATAAAGACTAAAAAGAGAAATCCCTTCC 2373
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mid11031 2208 ................TATGCACCAGATAACTTACCTCAAGGAAATACAG 2241
|| || | | | | ||| ||| ||| | |
ha02030 2374 TATATACAGTGTGCTACATTTACAAAAAATTTCTCCTTAAGAAAACAGAA 2423
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mid11031 2242 AGTCCAGAAATGTCAGTTTCCTGTCCTGGGAAGGAAGGGAGAACTTAGCA 2291
| || ||| || ||| ||| || | | | ||| ||
ha02030 2424 TATTCAAAAACAGCACTTT....TCCAGGAAGTTAGTGAGGAAGATAAGG 2469
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mid11031 2292 CAC......ATTTCTACACAGATGTTGCTCCTCTGTTTTGTCAAGTTCTT 2335
||| |||| || | |||||||||||| ||| || | | |||
ha02030 2470 CACACATTTATTTATAAATGGATGTTGCTCCTTTGTATTTTTAGCTTCCC 2519
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mid11031 2336 CATTTGTCCAGCAGCACAGGCTCCCCAGGAGGGGACAGGGGG........ 2377
||||| | || |||||||||| | ||| ||| | | |
ha02030 2520 TATTTGCTTAAAAGTACAGGCTCCCTAAGAGAGGATGGAGAGGGAGAGAC 2569
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mid11031 2378 .................................................. 2378
ha02030 2570 TGAATTGTTAGTAGGTCTAAACATCAAAGAAAACATTTTTATTAGTTACT 2619
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mid11031 2378 ...............CTGACTTTTATAACTTTCAGTCACCTTCCATTCTG 2412
| || | ||||| |||| |||||||| ||
ha02030 2620 TATGGAAAATCATCTATTACAATGATAACCTTCAAGTGACTTCCATTATG 2669
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mid11031 2413 GCTGGGCAGGAGGTGAGCCCTGTCCGT....GTTGTGTGGCAGTGGCTTT 2458
||||| |||| ||||||| | || | || ||||| ||| |||
ha02030 2670 GCTGGACAGGCGGTGAGCTCAGTGGATTGCAGTGGTGTGCTGGTGATTTT 2719
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mid11031 2459 GCACACTGAGCTGTAGTGAGGGAACCCAGACTCCACTGCTGGTGTG...A 2505
||||| |||||| | || || ||| ||| ||||||| ||||
ha02030 2720 GCACAGTGAGCTCTGCGGAAGG.GGTCAGGCTCAACTGCTGATGTGTCTC 2768
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mid11031 2506 ACCCAGGGGAGATGAGGGATGTCTG........CTCCAACCCTCCGCTGA 2547
|| | | ||| |||| |||||| || || | ||
ha02030 2769 ACACGTAGCAGACAAGGGGTGTCTGACTGGCTTCTTTTGCCTCAAGATGG 2818
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mid11031 2548 GGGCTGGCTTGTGTCATGTAATCAGTTGCCTACTGTTGGAGGTTGGGGTT 2597
| || | | || ||| |||||| || || || || |||||||| ||
ha02030 2819 TGTATGTCGTAAGTGATGCAATCAGCTGTCTGCTTTTTAAGGTTGGGATT 2868
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mid11031 2598 GGGGCTGACTTGGGATTTACA.CATCTGCTTTAGCAACCAAGCCTGGGCT 2646
| | |||||||| ||| | || ||||||||||||||| || ||
ha02030 2869 GTGCTGACTTTGGGATTAACATGAGCTTCTTTAGCAACCAAGCATGAACT 2918
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid11031 2647 ACCTGGAGACCAGCAGCTTGGGAGATGAGTCCTGGTCTCCTGTCGAGAAC 2696
| ||||||| || |||||||||||||||||| | |||| || ||
ha02030 2919 TGATTAAGACCAGAAGTTTGGGAGATGAGTCCTGGCATTATGTCTAGGAC 2968
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid11031 2697 TGGAGGGCAGATGC.TTGTCCATCAAGCTGAGTAAAGGTTGGTGTACTCC 2745
| | |||| || |||| | |||||||||||||||||| || |||
ha02030 2969 T..AAAGCAGTGGCTTTGTATAGCAAGCTGAGTAAAGGTTGACATATTCC 3016
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid11031 2746 AAAACTGTTTTTTCTAACGTG............GAAAAGAGTGGAATGCC 2783
||||| || ||| ||| || || ||| ||||| |||
ha02030 3017 AAAACCCTTCTTTTTAAAATGAAAAAGGATGGAGAGAAGGATGGAAAGCC 3066
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid11031 2784 TGGACTTAAGC..TTACAGGAAAGCTCTGGAGAATTCCCTATTTTCAGTG 2831
||||||||| | ||| | ||| |||||||| | |||| |
ha02030 3067 TGGACTTAAACCTTTAGAAAAAACTTCTGGAGAGAAATCCCTTTTAAACA 3116
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid11031 2832 GTTATTTTTGTCATTGCCTCTAGTGATTTTTGTAAATGGGAATGGAAAAG 2881
|||| |||||||||||||||| || |||| | ||||| |||||||||||
ha02030 3117 GTTACTTTTGTCATTGCCTCTGGTCATTTGTCTAAATAGGAATGGAAAAT 3166
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid11031 2882 TACAAG....GCAACCATCCAGTCTTTAAAAAATTTTGATTATGGTGGGA 2927
|| ||| ||||| ||||| ||||| | |||||| ||||
ha02030 3167 TAAAAGAAAAGCAACAATCCAATCTTT..TTTCTAAAAATTATGCTGGGG 3214
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid11031 2928 TTTCTAATAAAACCAAATTTGAATTGG....................... 2954
| || | |||||| ||||||||||||
ha02030 3215 TCTCGACTAAAACTGAATTTGAATTGGAAAATTCTGGTGTTGGTTGGAGT 3264
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid11031 2955 .................................................. 2955
ha02030 3265 TCCATCTTGCAAGGGATAATACAAATCCTATGATCTCTATGCCCAATATG 3314
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mid11031 2955 .................................................. 2955
ha02030 3315 CTGCCTCAACTCTGAGCTGTCTGCAAGGCTTAGTAAGTATTGAGTGGTGT 3364
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mid11031 2955 .................................................. 2955
ha02030 3365 TTTTTTTTTCTTTTTATACAATACCATGTTAACCACATGAGTTAAATAAA 3414
3451 ----+----*----+- 3466
mid11031 2955 ................ 2955
ha02030 3415 TTTGAGAAGTTGTTTT 3430