Comparison of KIAA cDNA sequences between mouse and human (FLJ00177)
<<Original sequence data>>
mouse mFLJ00177 (mid10035) length: 3165 bp, CDS: 1 - 2448
human (sj01081) length: 4677 bp, CDS: 32 - 1612
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 43 - 73 26 5 16.1
CDS: 74 - 1654 1425 153 9.7
3'UTR: 1655 - 4762 1226 274 18.3
amino acid
CDS: 74 - 1654 495 32 6.1
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mid10035 1 AGAAATCGACACGGCTCCGGGACCGCTTGCTTCCTGTTTGTCGGACGAGG 50
|||||||
sj01081 1 ..........................................CGACGAGG 8
51 ----+----*----+----*----+----*----+----*----+----* 100
R L E L G P A G G
mid10035 51 AGACATGGCGGCAGCGCCCGCAGCGGCTGGAGCTGGGGCCAGCCGGGGGA 100
| |||||||||| ||||| | ||||||||| |||| ||| |||| ||||
sj01081 9 AAACATGGCGGCGGCGCCGGTAGCGGCTGGGTCTGGAGCCGGCCGAGGGA 58
R L G L E P A E G
101 ----+----*----+----*----+----*----+----*----+----* 150
G G W Q L P R R R G A A G E V D R
mid10035 101 GGCGGTTGGCAGCTACCGCGGCGGCGTGGGGCGGCTGGGGAGGTCGACCG 150
| |||| |||||| || | |||||| |||||||| ||||| || || |||
sj01081 59 GACGGTCGGCAGCCACAGTGGCGGCTTGGGGCGGATGGGGCGGCCGGCCG 108
D G R Q P Q W R L G A D G A A G R
151 ----+----*----+----*----+----*----+----*----+----* 200
G R V T S C C S C G - G Q L T G R
mid10035 151 CGGCCGGGTAACATCCTGCTGCAGCTGCGGCA.GGGCCAGCTCACCGGCC 199
||||| |||||||| ||||||||||||||||| ||||||||| |||||||
sj01081 109 CGGCCTGGTAACATTCTGCTGCAGCTGCGGCAGGGGCCAGCTGACCGGCC 158
G L V T F C C S C G R G Q L T G R
201 ----+----*----+----*----+----*----+----*----+----* 250
G L V R A V Q F T E T F L T E R
mid10035 200 GAGGCCTGGTCCGGGCGGTGCAGTTCACTGAGACCTTTTTGACCGAGAGG 249
| |||||||||||||||||||||||||||||||| |||||||| ||||||
sj01081 159 GGGGCCTGGTCCGGGCGGTGCAGTTCACTGAGACTTTTTTGACGGAGAGG 208
G L V R A V Q F T E T F L T E R
251 ----+----*----+----*----+----*----+----*----+----* 300
D K L S K W S G I P Q L L L K L Y
mid10035 250 GACAAATTGTCCAAATGGAGTGGAATTCCTCAGTTGCTCCTTAAGCTGTA 299
|||||| ||||| |||||||||||||||||| ||||||| |||||| |
sj01081 209 GACAAACAATCCAAGTGGAGTGGAATTCCTCAGCTGCTCCTCAAGCTGCA 258
D K Q S K W S G I P Q L L L K L H
301 ----+----*----+----*----+----*----+----*----+----* 350
A T S H L H S D F V E C Q S I L K
mid10035 300 TGCCACCAGCCATCTGCACAGTGACTTCGTTGAGTGCCAAAGCATTCTCA 349
|||||||||| || ||||||||||| |||||||| |||| ||| ||||
sj01081 259 CACCACCAGCCACCTCCACAGTGACTTTGTTGAGTGTCAAAACATCCTCA 308
T T S H L H S D F V E C Q N I L K
351 ----+----*----+----*----+----*----+----*----+----* 400
E I S P L L S M E A M A F V T E
mid10035 350 AGGAGATTTCTCCTCTTCTCTCTATGGAGGCTATGGCGTTTGTAACTGAA 399
|||| ||||||||||||||||| |||||||||||||| ||||| ||||||
sj01081 309 AGGAAATTTCTCCTCTTCTCTCCATGGAGGCTATGGCATTTGTTACTGAA 358
E I S P L L S M E A M A F V T E
401 ----+----*----+----*----+----*----+----*----+----* 450
D R K F T Q E A T Y P N T Y I F D
mid10035 400 GACAGGAAATTTACTCAAGAAGCTACATACCCAAATACATATATTTTTGA 449
|| |||||| |||| |||||| | || || |||||||| |||||||||||
sj01081 359 GAGAGGAAACTTACCCAAGAAACCACTTATCCAAATACTTATATTTTTGA 408
E R K L T Q E T T Y P N T Y I F D
451 ----+----*----+----*----+----*----+----*----+----* 500
L F G G V D L L V E I L M R P T I
mid10035 450 CTTATTTGGAGGTGTTGATCTTCTTGTAGAAATTCTTATGAGGCCTACCA 499
||| |||||||||||||||||||||||||||||||||||||||||||| |
sj01081 409 CTTGTTTGGAGGTGTTGATCTTCTTGTAGAAATTCTTATGAGGCCTACGA 458
L F G G V D L L V E I L M R P T I
501 ----+----*----+----*----+----*----+----*----+----* 550
S I R G Q K L K I S D E M S K D
mid10035 500 TCTCTATCCGGGGACAGAAACTAAAAATAAGTGACGAGATGTCGAAGGAC 549
|||||||||||||||||||||| ||||||||||| || ||||| ||||||
sj01081 459 TCTCTATCCGGGGACAGAAACTGAAAATAAGTGATGAAATGTCCAAGGAC 508
S I R G Q K L K I S D E M S K D
551 ----+----*----+----*----+----*----+----*----+----* 600
C L S I L Y N T C V C T E G V T K
mid10035 550 TGCTTGAGCATCCTGTACAATACCTGTGTCTGCACGGAAGGAGTAACGAA 599
|||||||| |||||||| |||||||||||||| || || ||||| || ||
sj01081 509 TGCTTGAGTATCCTGTATAATACCTGTGTCTGTACAGAGGGAGTTACAAA 558
C L S I L Y N T C V C T E G V T K
601 ----+----*----+----*----+----*----+----*----+----* 650
R L A E K N D F V I F L F T L M T
mid10035 600 GCGTTTGGCAGAAAAGAATGATTTTGTGATTTTTCTGTTCACACTGATGA 649
||||||||||||||||||||| |||||||| || ||||| ||| ||||||
sj01081 559 GCGTTTGGCAGAAAAGAATGACTTTGTGATCTTCCTGTTTACATTGATGA 608
R L A E K N D F V I F L F T L M T
651 ----+----*----+----*----+----*----+----*----+----* 700
S K K T F L Q T A T L I E D I L
mid10035 650 CAAGTAAGAAGACATTCTTACAAACAGCGACTCTCATTGAAGACATTTTG 699
|||||||||||||||||||||||||||| || ||||||||||| ||||||
sj01081 609 CAAGTAAGAAGACATTCTTACAAACAGCAACCCTCATTGAAGATATTTTG 658
S K K T F L Q T A T L I E D I L
701 ----+----*----+----*----+----*----+----*----+----* 750
G V K K E M I R L D E V P N L S S
mid10035 700 GGTGTTAAGAAGGAAATGATCCGGCTAGATGAAGTTCCCAATCTGAGTTC 749
|||||||| |||||||||||||| ||||||||||| ||||||||||||||
sj01081 659 GGTGTTAAAAAGGAAATGATCCGACTAGATGAAGTCCCCAATCTGAGTTC 708
G V K K E M I R L D E V P N L S S
751 ----+----*----+----*----+----*----+----*----+----* 800
L V S N F D Q Q Q L A N F C R I L
mid10035 750 CTTAGTATCCAATTTCGATCAGCAGCAGCTTGCTAACTTCTGCAGGATCC 799
|||||||||||||||||||||||||||||| ||||| |||||| |||| |
sj01081 709 CTTAGTATCCAATTTCGATCAGCAGCAGCTCGCTAATTTCTGCCGGATTC 758
L V S N F D Q Q Q L A N F C R I L
801 ----+----*----+----*----+----*----+----*----+----* 850
A V T I S E M D T G N D D K H T
mid10035 800 TGGCTGTCACCATTTCAGAGATGGACACGGGGAATGACGACAAACACACG 849
||||||||||||||||||||||||| || |||||||| ||||| ||||||
sj01081 759 TGGCTGTCACCATTTCAGAGATGGATACAGGGAATGATGACAAGCACACG 808
A V T I S E M D T G N D D K H T
851 ----+----*----+----*----+----*----+----*----+----* 900
L L A K N A Q Q K K S L S L G P S
mid10035 850 CTTCTTGCCAAAAATGCTCAGCAGAAGAAGAGTTTGAGTTTGGGGCCTTC 899
|||||||||||||||||||| ||||||||||| |||||||||||||||||
sj01081 809 CTTCTTGCCAAAAATGCTCAACAGAAGAAGAGCTTGAGTTTGGGGCCTTC 858
L L A K N A Q Q K K S L S L G P S
901 ----+----*----+----*----+----*----+----*----+----* 950
A A E I N Q A A L L S I P G F V E
mid10035 900 TGCAGCTGAAATCAACCAAGCTGCTCTTCTCAGCATCCCTGGCTTTGTGG 949
|||||| |||||||| ||||| || ||||||||||| ||||||||||| |
sj01081 859 TGCAGCGGAAATCAATCAAGCGGCCCTTCTCAGCATTCCTGGCTTTGTTG 908
A A E I N Q A A L L S I P G F V E
951 ----+----*----+----*----+----*----+----*----+----* 1000
R L C K L A T R K V S E S T G T
mid10035 950 AACGGCTTTGCAAACTGGCAACTAGGAAAGTGTCAGAGTCAACGGGCACA 999
| ||||||||||||||||| ||| | || |||||||||||||||||||||
sj01081 909 AGCGGCTTTGCAAACTGGCGACTCGAAAGGTGTCAGAGTCAACGGGCACA 958
R L C K L A T R K V S E S T G T
1001 ----+----*----+----*----+----*----+----*----+----* 1050
A S F L Q E L E E W Y T W L D N A
mid10035 1000 GCCAGCTTCCTTCAAGAACTGGAGGAGTGGTACACATGGCTCGACAATGC 1049
|||||||||||||| || |||| ||||||||||||||||| ||||||||
sj01081 959 GCCAGCTTCCTTCAGGAGTTGGAAGAGTGGTACACATGGCTAGACAATGC 1008
A S F L Q E L E E W Y T W L D N A
1051 ----+----*----+----*----+----*----+----*----+----* 1100
L V L D A L M R V A N E E S E H N
mid10035 1050 GTTGGTGCTAGATGCCCTGATGCGAGTGGCCAATGAGGAGTCTGAACACA 1099
||||||||||||||||||||||||||||||||||||||||| || ||||
sj01081 1009 TTTGGTGCTAGATGCCCTGATGCGAGTGGCCAATGAGGAGTCAGAGCACA 1058
L V L D A L M R V A N E E S E H N
1101 ----+----*----+----*----+----*----+----*----+----* 1150
Q A P T V F P S L G T S E E G G
mid10035 1100 ATCAAGCCCCCACTGTGTTCCCTTCTCTAGGCACTTCGGAGGAGGGTGGG 1149
|||||||| ||| |||||||||| ||| ||| |||| |||||| |||
sj01081 1059 ATCAAGCCTCCATTGTGTTCCCTCCTCCAGGGGCTTCTGAGGAGAATGGC 1108
Q A S I V F P P P G A S E E N G
1151 ----+----*----+----*----+----*----+----*----+----* 1200
L P H T S A R A Q L P Q S M K I M
mid10035 1150 CTGCCACACACCTCGGCCAGGGCGCAGCTGCCCCAGTCCATGAAGATTAT 1199
||||| ||||| || ||||| | |||||||||||||| |||||||||||
sj01081 1109 CTGCCTCACACGTCAGCCAGAACCCAGCTGCCCCAGTCAATGAAGATTAT 1158
L P H T S A R T Q L P Q S M K I M
1201 ----+----*----+----*----+----*----+----*----+----* 1250
H E I M Y K L E V L Y V L C V L L
mid10035 1200 GCATGAGATTATGTACAAACTGGAAGTGCTTTATGTCCTCTGCGTGCTGC 1249
||||||||| |||||||||||||||||||| |||||||||||||||||||
sj01081 1159 GCATGAGATCATGTACAAACTGGAAGTGCTCTATGTCCTCTGCGTGCTGC 1208
H E I M Y K L E V L Y V L C V L L
1251 ----+----*----+----*----+----*----+----*----+----* 1300
M G R Q R N Q V H R M I A E F K
mid10035 1250 TGATGGGGCGTCAGCGAAACCAGGTCCACAGGATGATTGCTGAGTTCAAG 1299
||||||||||||||||||||||||| ||||| |||||||| |||||||||
sj01081 1209 TGATGGGGCGTCAGCGAAACCAGGTTCACAGAATGATTGCAGAGTTCAAG 1258
M G R Q R N Q V H R M I A E F K
1301 ----+----*----+----*----+----*----+----*----+----* 1350
L I P G L N N L F D K L I W R K H
mid10035 1300 TTGATCCCAGGACTCAATAATTTGTTCGACAAACTGATTTGGAGGAAGCA 1349
||||||| ||||| ||||||||||| |||||||||||||||||||||||
sj01081 1259 CTGATCCCTGGACTTAATAATTTGTTTGACAAACTGATTTGGAGGAAGCA 1308
L I P G L N N L F D K L I W R K H
1351 ----+----*----+----*----+----*----+----*----+----* 1400
S A S A L V L H G H N Q N C D C S
mid10035 1350 TTCAGCATCTGCCCTTGTCCTCCATGGCCACAACCAGAACTGTGACTGTA 1399
||||||||||||||||||||||||||| ||||||||||||||||||||||
sj01081 1309 TTCAGCATCTGCCCTTGTCCTCCATGGTCACAACCAGAACTGTGACTGTA 1358
S A S A L V L H G H N Q N C D C S
1401 ----+----*----+----*----+----*----+----*----+----* 1450
P D I T L K I Q F L R L L Q S F
mid10035 1400 GCCCGGACATCACCTTGAAGATCCAGTTTTTGAGACTTCTCCAGAGTTTC 1449
|||||||||||||||||||||| ||||||||||| ||||| ||||| |||
sj01081 1359 GCCCGGACATCACCTTGAAGATACAGTTTTTGAGGCTTCTTCAGAGCTTC 1408
P D I T L K I Q F L R L L Q S F
1451 ----+----*----+----*----+----*----+----*----+----* 1500
S D H H E N K Y L L L N N Q E L N
mid10035 1450 AGTGACCACCATGAGAACAAGTACTTGCTGCTCAACAACCAGGAGCTAAA 1499
||||||||||| ||||||||||||||| | ||||||||||||||||| ||
sj01081 1409 AGTGACCACCACGAGAACAAGTACTTGTTACTCAACAACCAGGAGCTGAA 1458
S D H H E N K Y L L L N N Q E L N
1501 ----+----*----+----*----+----*----+----*----+----* 1550
E L S A I S L K A N I P E V E A V
mid10035 1500 TGAGCTCAGTGCCATCTCGCTGAAAGCCAACATCCCTGAGGTGGAGGCTG 1549
||| |||||||||||||| || || |||||||||||||||||||| ||||
sj01081 1459 TGAACTCAGTGCCATCTCTCTCAAGGCCAACATCCCTGAGGTGGAAGCTG 1508
E L S A I S L K A N I P E V E A V
1551 ----+----*----+----*----+----*----+----*----+----* 1600
L N T D R S L V C D G K R G L L
mid10035 1550 TCCTCAACACTGACAGGAGTCTGGTGTGTGACGGCAAGAGGGGCCTACTA 1599
|||||||||| ||||||||| |||||||||| || ||||||||| || ||
sj01081 1509 TCCTCAACACCGACAGGAGTTTGGTGTGTGATGGGAAGAGGGGCTTATTA 1558
L N T D R S L V C D G K R G L L
1601 ----+----*----+----*----+----*----+----*----+----* 1650
T R L L Q V M K K E P A E S S F -
mid10035 1600 ACTCGGCTGCTGCAGGTCATGAAGAAGGAGCCAGCGGAGTCTTCATTCAG 1649
||||| ||||||||||||||||||||||||||||| ||||| || |||||
sj01081 1559 ACTCGTCTGCTGCAGGTCATGAAGAAGGAGCCAGCAGAGTCGTCTTTCAG 1608
T R L L Q V M K K E P A E S S F R
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mid10035 1650 .................................................. 1650
sj01081 1609 GTGAGTCTGGGGAAAAGTACCTGCCGATTCTGCGGGGCTGCAGAGCCAGG 1658
*
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mid10035 1650 .................................................. 1650
sj01081 1659 TGTTTCTCAGGAGGTTAGGAATACCTCCTTTAGTCACCAGCGTCCATGCC 1708
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mid10035 1650 .................................................. 1650
sj01081 1709 TCCTGAAGCACAATTACTGTTGGGGAGAGGTGGTTTGACTGCCATCTTGT 1758
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mid10035 1650 ...GTTTTGGCAAGCCCGGGCTGT.......................... 1670
|||||| | | | || |||
sj01081 1759 GTAGTTTTGACTCGACAGGTATGTGAGAGCTTCTTCTGCAGCCCACAGTG 1808
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mid10035 1671 .................................................. 1671
sj01081 1809 ACCGAGCATTCACCAAGCACCTGTTCTGTGCTGGTGCCTTATGGGTGGGA 1858
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mid10035 1671 .................................................. 1671
sj01081 1859 GAGAACTAGGATACGGGCCCTGCCATGAATTCCCTAGAGCTGTGCTGTTT 1908
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mid10035 1671 .................................................. 1671
sj01081 1909 CAATGCAGTGTGGGAAGGAATGGAGCCAGGGTTGGCCCAGGAGCTATAGG 1958
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mid10035 1671 ......GGAAAGTTTCCTCCGAGG.......................... 1688
|||||| || |||| |
sj01081 1959 AGCAAAGGAAAGCCTCTTCCGCTGCTAGGGCTGGGGGCTGGGTGAATACA 2008
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mid10035 1689 .................................................. 1689
sj01081 2009 GGGAGACCTTCTCTGAGGTCCTTAGATACATCTAAGATGAGTCTTGAAGT 2058
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mid10035 1689 .................................................. 1689
sj01081 2059 CAGTGGACAGGTAGAGTTCCATCAGGGCCGGGCGTGAGCTGTCAGGAGGC 2108
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mid10035 1689 ..........................................GACCACCT 1696
|| |||
sj01081 2109 TTCATGCCCACATGGGCCTTTGTCACTTCAGTGCCTTGTCCAAACTCCCT 2158
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mid10035 1697 CCTATGCAGACCAGATGTTCC............................. 1717
|| | ||| | ||| ||
sj01081 2159 GTCGTGGATACCCGCTGTGCCCTCTGGGTCCCTCGGTCAGCATCAACCAC 2208
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mid10035 1718 .................................................. 1718
sj01081 2209 TACTTCCCTAGGCCAGCCCATCGTCTGTGAGCCCAGTGGCCTGTCTGCAT 2258
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mid10035 1718 .................................................. 1718
sj01081 2259 GTGTTCGTCCGCTTCCCACACACATTCCTGGCCCCTCAATTGCACGTCCT 2308
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mid10035 1718 ...............................................TGC 1720
||
sj01081 2309 CCCATTCTTGTGAAAGGGCAAGGCCTAGAGTATGTTTCACGGGGGCTCGC 2358
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mid10035 1721 TGAAGCGAGGCCTTCTGGAGCACATCTTA..................... 1749
| ||| || ||||| || || |||
sj01081 2359 AGGAGCCAGCCCTTCGATCCCAGATGTTACCCTTTCTGTGACACAGCCCC 2408
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mid10035 1750 .................................................. 1750
sj01081 2409 TTCCAGACAGACCCAGATAGAAGACTTCTCCACTGAGCTGGCTCTCTGTG 2458
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mid10035 1750 ..........................................TACTGCAT 1757
| ||| |
sj01081 2459 AGGATGGGGGCACTGCTGTGTCCCCAGGCCCAGGATGAAGCCTGATGCTT 2508
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mid10035 1758 TGTGGACAGTGAGTGCAAGTCTAG.......................... 1781
|| || | ||| | || ||
sj01081 2509 GGTAGATGTTCAGTAAATGTTGAGTACATGAAAAGGCAACAAACATCTCC 2558
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mid10035 1782 .................................................. 1782
sj01081 2559 CAACCCCTTGGAGAACTGAACATGGGCCGGAAGAGGGCAGCCTTAGCCAC 2608
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mid10035 1782 .................................................. 1782
sj01081 2609 CTGAGCCAGTATTTGGGTCGCAGGTTTTGGCAAGCTCGGGCTGTGGAGAG 2658
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mid10035 1782 ................................GGATGTACTCCAGAGCTA 1799
||||| |||||||| ||
sj01081 2659 TTTCCTCCGAGGGACCACCTCCTATGCAGACCAGATGTGCTCCAGAGTTA 2708
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mid10035 1800 CTTTGATCTCCTGGGAGAGCTGATGAAGTTCAACGTCGATGCATTCAAGA 1849
|||||| |||||||| |||||||||||||||||||| |||||||||||||
sj01081 2709 CTTTGACCTCCTGGGGGAGCTGATGAAGTTCAACGTTGATGCATTCAAGA 2758
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mid10035 1850 GATTCAATAAATATATCAACACTGATGCAAAGTTCCAGGTGTTCCTGAAA 1899
|||||||||||||||||||||| ||||||||||||||||| ||||||||
sj01081 2759 GATTCAATAAATATATCAACACCGATGCAAAGTTCCAGGTATTCCTGAAG 2808
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mid10035 1900 CAGATCAACAGCTCGCTAGTGGACTCCAACATGCTGGTGCGCTGTGTCAC 1949
|||||||||||||| || ||||||||||||||||||||||||||||||||
sj01081 2809 CAGATCAACAGCTCCCTGGTGGACTCCAACATGCTGGTGCGCTGTGTCAC 2858
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mid10035 1950 TCTGTCACTGGACCGATTTGAAAACCAGGTGGACATGAAAGTGGCCGAGG 1999
|||||| |||||||||||||||||||||||||| |||||||| |||||||
sj01081 2859 TCTGTCCCTGGACCGATTTGAAAACCAGGTGGATATGAAAGTTGCCGAGG 2908
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mid10035 2000 TCCTGTCCGAGTGCCGCCTGCTTGCCTACATATCCCAGGTGCCCACGCAA 2049
| ||||| || ||||||||||| ||||||||||||||||||||||||||
sj01081 2909 TACTGTCTGAATGCCGCCTGCTCGCCTACATATCCCAGGTGCCCACGCAG 2958
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mid10035 2050 ATGTCCTTCCTCTTCCGCCTCATCAATATCATCCATGTGCAGACGCT... 2096
|||||||||||||||||||||||||| |||||||| |||||||||||
sj01081 2959 ATGTCCTTCCTCTTCCGCCTCATCAACATCATCCACGTGCAGACGCTGAC 3008
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mid10035 2097 .................................................. 2097
sj01081 3009 CCAGGTGAGAGGCCCCGGCAGACACACAGCAGGGAAGGTCGATTGGAAAC 3058
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mid10035 2097 .................................................. 2097
sj01081 3059 CACTTCCTTTGTCCTGGTGCCCAGCAGGTTTCTGTCCCCCACTCCAGAAG 3108
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mid10035 2097 .................................................. 2097
sj01081 3109 TGCGTCTCTGGAGACCCAGCTCTTCTGAGGACTGTGCTCAGGAGGAATCA 3158
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mid10035 2097 .................................................. 2097
sj01081 3159 GTGTCCCATTGTACAGACAGGGCCTAAGGAAGGAGGGCTCGCAAGTGCCC 3208
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mid10035 2097 .................................................. 2097
sj01081 3209 TCAGGTCACAGGCTGACTTGCAGGCCAGTGCTCTCCCCGCCTCCCCCATG 3258
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mid10035 2097 .................................................. 2097
sj01081 3259 TCCACGTCCCTCACACCTTCTGCCCTGCTGGGCTTTGGAATCGGACCTGA 3308
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mid10035 2097 .................................................. 2097
sj01081 3309 GGCTGCCCAACTCCCTCACTGAATAGTCATGCAGCCTTCCCTTCTCTGAG 3358
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mid10035 2097 .................................................. 2097
sj01081 3359 CCTCCTGCCCCCTCTTTTCTAGAGTGAGGGTGATCTTAGCACCTCTCAGA 3408
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mid10035 2097 .................................................. 2097
sj01081 3409 GGTGGTCTTTGGTTCCGTTCTGAGGTGAAGCACCAGGTGGGAGTGCATGG 3458
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mid10035 2097 .................................................. 2097
sj01081 3459 TGAGTGGGGCAGAACTCTTTCCCCACCGAGGCGCGCAGGCTAGTGCTGAA 3508
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mid10035 2097 .................................................. 2097
sj01081 3509 TGGCACTTCTGAAGCGGGATAACCGCCCCAACACACGCACCCAGCCCTGC 3558
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mid10035 2097 .................................AACCCAGGAGAACGTCA 2113
| |||||||||||||||
sj01081 3559 CTGGGACGGACCTTCCGGAAGGAGTGATGCTTGAGCCCAGGAGAACGTCA 3608
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mid10035 2114 GCTGCCTCAACACCAGCCTGGTAATCCTGATGCTGGCCCGACGGAAAGAG 2163
|||||||||||||||||||||| |||||||||||||||||||||||||||
sj01081 3609 GCTGCCTCAACACCAGCCTGGTGATCCTGATGCTGGCCCGACGGAAAGAG 3658
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mid10035 2164 CGGCTGCCCCTGTACCTGCGACTGCTACAGCGAATGGAGCACAGCAAGAA 2213
|||||||||||||||||||| ||||| ||||| |||||||||||||||||
sj01081 3659 CGGCTGCCCCTGTACCTGCGGCTGCTGCAGCGGATGGAGCACAGCAAGAA 3708
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mid10035 2214 ATACCCCGGCTTCCTGCTCAACAACTTCCACAACCTGCTGCGCTTTTGGC 2263
|||||||||||||||||||||||||||||||||||||||||||| ||||
sj01081 3709 GTACCCCGGCTTCCTGCTCAACAACTTCCACAACCTGCTGCGCTTCTGGC 3758
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mid10035 2264 AGCAGCACTACCTGCACAAGGATAAGGACAGCACCTGCCTGGAGAATAGC 2313
|||||||||||||||||||||| ||||||||||||||||| ||||| |||
sj01081 3759 AGCAGCACTACCTGCACAAGGACAAGGACAGCACCTGCCTAGAGAACAGC 3808
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mid10035 2314 TCCTGTATCAGCTTCTCGTACTGGAAGGAGACAGTGTCCATCTTGTTGAA 2363
||||| ||||||||||| |||||||||||||||||||||||| |||||||
sj01081 3809 TCCTGCATCAGCTTCTCATACTGGAAGGAGACAGTGTCCATCCTGTTGAA 3858
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mid10035 2364 CCCAGACCGCCAGTCGCCCTCTGCCCTCGTCAGCTACATTGAGGAGCCCT 2413
||| ||||| ||||| |||||||| ||||| |||||||||||||||||||
sj01081 3859 CCCGGACCGGCAGTCACCCTCTGCTCTCGTTAGCTACATTGAGGAGCCCT 3908
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mid10035 2414 ACATGGACATAGACAGAGACTTCACTGAGGAGTGACCTTGAGCCAGGCTT 2463
|||||||||||||||| ||||||||||||||||||||||| ||||||| |
sj01081 3909 ACATGGACATAGACAGGGACTTCACTGAGGAGTGACCTTGGGCCAGGCCT 3958
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mid10035 2464 CAAGAAGCTGCCAGGCAGGGGCGAGTGCAGAGAGCCAGAGTGCACGTGCC 2513
| || ||||| ||| | | | ||| || ||| |
sj01081 3959 CGGGAGGCTGCTGGGCCAGTGTGGGTG.........AGCGTGGGTACGAT 3999
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mid10035 2514 GCCTCGCACTCTGCCCATCCCTGTCCCTCTTGCCTCCCCAGTGCTCTGTC 2563
||| | | | |||| || |||| | | | | | ||||| |
sj01081 4000 GCCACACGCCCTGC....CCTGTTCCCGTTCCTCCCTGCTGCTCTCTGCC 4045
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mid10035 2564 CACCCCGGGTGTCCAGGTGCAGGCTCAGTGGAAGGAACATCCTAGAAGCT 2613
|||| ||| | ||| |||||| |||| ||| | ||||| ||||
sj01081 4046 TGCCCCAGGTCTTTGGGTACAGGCTTGGTGGGAGGGAAGTCCTAAAAGCC 4095
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mid10035 2614 CTTG..TCTCCTGGGTCTGAGGGCCC.AGGTCATGGGGAGCCTGTTTCTT 2660
|||| | ||||||||||||||||| ||||||||| ||||||
sj01081 4096 CTTGGTCCCCCTGGGTCTGAGGGCCCTAGGTCATGGAGAGCCT....... 4138
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mid10035 2661 CACTGTCCCCAGGGTAAGGACAATGGCACCATGCCCACCTTTCCCTCGCA 2710
| ||||||| | ||||| | || ||||||||||||||||| || |
sj01081 4139 ..CAGTCCCCATAATGAGGAC.AGGGTACCATGCCCACCTTTCCTTCAGA 4185
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mid10035 2711 ATCCTGGAGCCC.TGGCCTGCCAGAG...AAGGGGAACACGGGAAACCAT 2756
| ||||| |||| |||| |||||| | || | | | |
sj01081 4186 ACCCTGGGGCCCAGGGCCACCCAGAGGTAAGAGGACATTTAGCATTAGCT 4235
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mid10035 2757 CTGTCTGAGCTTCTCCC................ATCAGTCC..TGATGGA 2788
|||| |||||| || || ||||||| |||
sj01081 4236 CTGTGTGAGCTCCTGCCGGTTTCTTGGCTGTCAGTCAGTCCCAGAGTGGG 4285
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mid10035 2789 GAGGAAGAT...GCAGACCC...........CTGTGAGCCAAACC..... 2819
||||||||| | ||||| ||||||||||| ||
sj01081 4286 GAGGAAGATATGGGTGACCCCCACCCCCCATCTGTGAGCCAAGCCTCCCT 4335
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mid10035 2820 ..TCCCTGGCCTCAGGACGCAGGCAGAGAGGCTCCTGAGCCCTGGGCAGG 2867
|||||||||| |||| ||||| | ||||| ||||||||||||||||
sj01081 4336 TGTCCCTGGCCTTTGGACCCAGGC..AAAGGCTTCTGAGCCCTGGGCAGG 4383
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mid10035 2868 ...GGTGGGTATCGGAGAATGCTGCCTTCCCCGGGGTCTGCCCATCTCTC 2914
|||||||| | |||||||||||||||||| | |||||| |
sj01081 4384 GGTGGTGGGTACCAGAGAATGCTGCCTTCCCCCAAGCCTGCCCCT..... 4428
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mid10035 2915 CCTTCCTCACCTCCCTTGTCTTCCTTTAGCTCCTCTGGTTC..TTTGCTC 2962
|| ||| | ||||| ||||||||||||||| |||||||
sj01081 4429 ..........CTGCCTCATTTTCCTGTAGCTCCTCTGGTTCTGTTTGCTC 4468
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mid10035 2963 ATTGGCCACTGTGTTCATCCAGGAGGCT..CCCTAGAAGTGGGGGGAGCC 3010
|||||| ||||||||||||| | || | || ||||||| |||| |
sj01081 4469 ATTGGCTGCTGTGTTCATCCAAGGGGGTTCTCCCAGAAGTGAGGGG...C 4515
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mid10035 3011 TTTTCTCTCCATCCCTTGGGGCATGGAGTGCCTGTGCCTGCCTGAGCCC. 3059
|||| |||||||||||| |||| || | ||||||||||| | |
sj01081 4516 CTTTCCCTCCATCCCTTGAGGCACGGGGCAGCTGTGCCTGCCCTGCCTCT 4565
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mid10035 3060 .....AGACACGGGAGCCTGGCTGAGAGCTTACCCTTGGCTCCTCC.TGT 3103
|| || | |||| ||||| || ||| | ||| |||
sj01081 4566 GCCTGAGGCAGCCGCTCCTGCCTGAGCCTGGACATGGGGCCCTTCCTTGT 4615
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mid10035 3104 GTTGCCAGTTTATTAACAGCAAATAAACCGATTAAATGGAGACTATTAAA 3153
||||||| ||||||||||||||||||||| ||||||||||||||||||||
sj01081 4616 GTTGCCAATTTATTAACAGCAAATAAACCAATTAAATGGAGACTATTAAA 4665
4751 ----+----*-- 4762
mid10035 3154 GAACTTTATTTT 3165
|||||||||||
sj01081 4666 TAACTTTATTTT 4677