# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mid10003.fasta.nr -Q ../query/mKIAA1637.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1637, 368 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914244 sequences Expectation_n fit: rho(ln(x))= 6.4941+/-0.000203; mu= 5.2371+/- 0.011 mean_var=129.9383+/-24.620, 0's: 28 Z-trim: 48 B-trim: 115 in 1/65 Lambda= 0.112514 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26339936|dbj|BAC33631.1| unnamed protein produc ( 422) 1985 333.1 6.7e-89 gi|28380077|sp|Q91W39.1|NCOA5_MOUSE RecName: Full= ( 579) 1985 333.2 8.5e-89 gi|148674494|gb|EDL06441.1| nuclear receptor coact ( 669) 1985 333.2 9.4e-89 gi|149042901|gb|EDL96475.1| nuclear receptor coact ( 578) 1977 331.9 2.1e-88 gi|220938223|emb|CAX16081.1| nuclear receptor coac ( 299) 1954 327.9 1.7e-87 gi|194044705|ref|XP_001929131.1| PREDICTED: simila ( 585) 1861 313.1 9.8e-83 gi|149733323|ref|XP_001503454.1| PREDICTED: simila ( 579) 1858 312.6 1.4e-82 gi|73992116|ref|XP_866625.1| PREDICTED: similar to ( 467) 1855 312.0 1.6e-82 gi|73992120|ref|XP_866646.1| PREDICTED: similar to ( 526) 1855 312.0 1.8e-82 gi|73992118|ref|XP_852980.1| PREDICTED: similar to ( 573) 1855 312.1 1.9e-82 gi|73992112|ref|XP_534443.2| PREDICTED: similar to ( 579) 1855 312.1 1.9e-82 gi|119596176|gb|EAW75770.1| nuclear receptor coact ( 474) 1840 309.6 8.9e-82 gi|114682415|ref|XP_514691.2| PREDICTED: nuclear r ( 681) 1842 310.0 9.3e-82 gi|28380083|sp|Q9HCD5.2|NCOA5_HUMAN RecName: Full= ( 579) 1840 309.7 1e-81 gi|11526821|gb|AAG36793.1|AF230533_1 nuclear recep ( 621) 1840 309.7 1.1e-81 gi|119596170|gb|EAW75764.1| nuclear receptor coact ( 633) 1840 309.7 1.1e-81 gi|109091937|ref|XP_001108239.1| PREDICTED: simila ( 707) 1839 309.6 1.3e-81 gi|55728170|emb|CAH90835.1| hypothetical protein [ ( 579) 1835 308.8 1.8e-81 gi|118100834|ref|XP_417476.2| PREDICTED: hypotheti ( 717) 1248 213.6 1e-52 gi|220938224|emb|CAX16082.1| nuclear receptor coac ( 406) 713 126.6 9.3e-27 gi|27882420|gb|AAH44688.1| Ncoa5-prov protein [Xen ( 630) 706 125.6 2.8e-26 gi|27503875|gb|AAH42244.1| MGC53372 protein [Xenop ( 619) 697 124.1 7.7e-26 gi|209154240|gb|ACI33352.1| Nuclear receptor coact ( 582) 685 122.2 2.8e-25 gi|209152341|gb|ACI33108.1| Nuclear receptor coact ( 676) 685 122.2 3.2e-25 gi|119596172|gb|EAW75766.1| nuclear receptor coact ( 287) 671 119.6 8.2e-25 gi|86438147|gb|AAI12848.1| Nuclear receptor coacti ( 406) 669 119.4 1.3e-24 gi|73992114|ref|XP_866612.1| PREDICTED: similar to ( 406) 667 119.1 1.7e-24 gi|51859365|gb|AAH81621.1| Zgc:92194 [Danio rerio] ( 479) 535 97.7 5.3e-18 gi|47220726|emb|CAG11795.1| unnamed protein produc ( 610) 432 81.1 6.8e-13 gi|89267367|emb|CAJ82795.1| nuclear receptor coact ( 436) 428 80.3 8.3e-13 gi|38174742|gb|AAH61404.1| Hypothetical protein MG ( 625) 428 80.5 1.1e-12 gi|108868870|gb|EAT33095.1| hypothetical protein A ( 304) 251 51.5 0.00028 gi|159163216|pdb|1V95|A Chain A, Solution Structur ( 130) 245 50.2 0.0003 >>gi|26339936|dbj|BAC33631.1| unnamed protein product [M (422 aa) initn: 1985 init1: 1985 opt: 1985 Z-score: 1752.3 bits: 333.1 E(): 6.7e-89 Smith-Waterman score: 1988; 93.333% identity (95.455% similar) in 330 aa overlap (49-368:93-422) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|263 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 70 80 90 100 110 120 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP 130 140 150 160 170 180 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL 190 200 210 220 230 240 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS 250 260 270 280 290 300 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA 310 320 330 340 350 360 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY 370 380 390 400 410 420 >>gi|28380077|sp|Q91W39.1|NCOA5_MOUSE RecName: Full=Nucl (579 aa) initn: 2011 init1: 1985 opt: 1985 Z-score: 1750.5 bits: 333.2 E(): 8.5e-89 Smith-Waterman score: 1988; 93.333% identity (95.455% similar) in 330 aa overlap (49-368:250-579) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|283 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 220 230 240 250 260 270 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP 280 290 300 310 320 330 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL 340 350 360 370 380 390 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS 400 410 420 430 440 450 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA 460 470 480 490 500 510 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY 520 530 540 550 560 570 >>gi|148674494|gb|EDL06441.1| nuclear receptor coactivat (669 aa) initn: 2024 init1: 1985 opt: 1985 Z-score: 1749.7 bits: 333.2 E(): 9.4e-89 Smith-Waterman score: 1988; 93.333% identity (95.455% similar) in 330 aa overlap (49-368:340-669) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|148 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 310 320 330 340 350 360 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP 370 380 390 400 410 420 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL 430 440 450 460 470 480 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS 490 500 510 520 530 540 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA 550 560 570 580 590 600 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY 610 620 630 640 650 660 >>gi|149042901|gb|EDL96475.1| nuclear receptor coactivat (578 aa) initn: 2003 init1: 1977 opt: 1977 Z-score: 1743.5 bits: 331.9 E(): 2.1e-88 Smith-Waterman score: 1980; 92.727% identity (95.455% similar) in 330 aa overlap (49-368:249-578) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|149 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 220 230 240 250 260 270 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP 280 290 300 310 320 330 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL 340 350 360 370 380 390 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KTQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS 400 410 420 430 440 450 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA 460 470 480 490 500 510 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SNMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY 520 530 540 550 560 570 >>gi|220938223|emb|CAX16081.1| nuclear receptor coactiva (299 aa) initn: 1954 init1: 1954 opt: 1954 Z-score: 1727.1 bits: 327.9 E(): 1.7e-87 Smith-Waterman score: 1954; 100.000% identity (100.000% similar) in 299 aa overlap (70-368:1-299) 40 50 60 70 80 90 mKIAA1 HCHHPAAPDSPFLHSQHHVRNTTRYREHRNMPQADAMVLVARNYERYKNDCREKEREEIA :::::::::::::::::::::::::::::: gi|220 MPQADAMVLVARNYERYKNDCREKEREEIA 10 20 30 100 110 120 130 140 150 mKIAA1 RQAAKMANDAILQERDRGGPEEGGRGGHPPAIQSLINLLADNRYLTAEETDKIINYLRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 RQAAKMANDAILQERDRGGPEEGGRGGHPPAIQSLINLLADNRYLTAEETDKIINYLRER 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 KERLLRSSADSLPGPISRQPLGAASGSSLKSQPSSQPLQSGQVLPSATPTPAAPPTSQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 KERLLRSSADSLPGPISRQPLGAASGSSLKSQPSSQPLQSGQVLPSATPTPAAPPTSQQE 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LQAKILSLFNSGAVAANSSSASPSVATGSSQNQNFSTAANSQPQQRPQASGNQPPNIVGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 LQAKILSLFNSGAVAANSSSASPSVATGSSQNQNFSTAANSQPQQRPQASGNQPPNIVGQ 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 AGSARNMGPRPGAPSQGLFGQPSSRLAPASTMASQRPVSSTGINFDNPSVQKALDTLIQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 AGSARNMGPRPGAPSQGLFGQPSSRLAPASTMASQRPVSSTGINFDNPSVQKALDTLIQS 220 230 240 250 260 270 340 350 360 mKIAA1 GPALSHLVSQTAAQVGRPQAPMGSYQRHY ::::::::::::::::::::::::::::: gi|220 GPALSHLVSQTAAQVGRPQAPMGSYQRHY 280 290 >>gi|194044705|ref|XP_001929131.1| PREDICTED: similar to (585 aa) initn: 1889 init1: 1861 opt: 1861 Z-score: 1641.7 bits: 313.1 E(): 9.8e-83 Smith-Waterman score: 1864; 86.364% identity (94.545% similar) in 330 aa overlap (49-368:256-585) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|194 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 230 240 250 260 270 280 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP ::::::::::::::::::::.:::::::::::::::::..::::::.::::.:: ::::: gi|194 NMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQERERGGPDEGMRGGHP 290 300 310 320 330 340 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::.:::.::::::::::::::.::.:: gi|194 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSTDSLPGPISRQPLGASSGASL 350 360 370 380 390 400 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :.:::::::::::::::::::::: ::::::::::::::::::.:::::::::::::.:. gi|194 KTQPSSQPLQSGQVLPSATPTPAAAPTSQQELQAKILSLFNSGTVAANSSSASPSVAAGN 410 420 430 440 450 460 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA .:::::::::::::::: ::::::::::.:::::::::::::::::::::::::.::::: gi|194 TQNQNFSTAANSQPQQRSQASGNQPPNILGQAGSARNMGPRPGAPSQGLFGQPSTRLAPA 470 480 490 500 510 520 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :..:::::::::.:::::::::::::::::::::::::::::.::::::::::::::::: gi|194 SNLASQRPVSSTAINFDNPSVQKALDTLIQSGPALSHLVSQTTAQVGRPQAPMGSYQRHY 530 540 550 560 570 580 >>gi|149733323|ref|XP_001503454.1| PREDICTED: similar to (579 aa) initn: 1884 init1: 1858 opt: 1858 Z-score: 1639.1 bits: 312.6 E(): 1.4e-82 Smith-Waterman score: 1861; 86.364% identity (94.848% similar) in 330 aa overlap (49-368:250-579) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|149 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 220 230 240 250 260 270 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP ::::::::::::::::::::.:::::::::::::::::..::::::.::::::: ::::: gi|149 NMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQERERGGPEEGVRGGHP 280 290 300 310 320 330 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::.:::.::::::::::::::.::.:: gi|149 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSTDSLPGPISRQPLGATSGASL 340 350 360 370 380 390 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :.:::::::::.:::::::::::::::::::::::::::::::.:.:::::::::::.:. gi|149 KTQPSSQPLQSSQVLPSATPTPAAPPTSQQELQAKILSLFNSGTVTANSSSASPSVAAGN 400 410 420 430 440 450 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA .::::::::.::::::: ::::::::::.:::::::::::::::::::::.::::::::: gi|149 TQNQNFSTAVNSQPQQRSQASGNQPPNILGQAGSARNMGPRPGAPSQGLFSQPSSRLAPA 460 470 480 490 500 510 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :..:::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|149 SNIASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTTAQVGRPQAPMGSYQRHY 520 530 540 550 560 570 >>gi|73992116|ref|XP_866625.1| PREDICTED: similar to nuc (467 aa) initn: 1881 init1: 1855 opt: 1855 Z-score: 1637.7 bits: 312.0 E(): 1.6e-82 Smith-Waterman score: 1858; 86.061% identity (94.545% similar) in 330 aa overlap (49-368:138-467) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|739 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 110 120 130 140 150 160 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP ::::::::::::::::::::.:::::::::::::::::..::::::.::::.:: ::::: gi|739 NMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQERERGGPDEGVRGGHP 170 180 190 200 210 220 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::.:::.::::::::::::::.::.:: gi|739 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSTDSLPGPISRQPLGATSGASL 230 240 250 260 270 280 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :.:::::::::::::::::::::::::::::::::::::::::.:.::::::::::..:. gi|739 KTQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGTVVANSSSASPSVVAGN 290 300 310 320 330 340 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA .::::::::.::::::: ::::::::::.::::::::::::::::::::::::::::::: gi|739 TQNQNFSTAVNSQPQQRSQASGNQPPNILGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA 350 360 370 380 390 400 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :.::::: :::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|739 SNMASQRSVSSTGINFDNPSVQKALDTLIQSGPALSHLVNQTTAQVGRPQAPMGSYQRHY 410 420 430 440 450 460 >>gi|73992120|ref|XP_866646.1| PREDICTED: similar to nuc (526 aa) initn: 1881 init1: 1855 opt: 1855 Z-score: 1637.0 bits: 312.0 E(): 1.8e-82 Smith-Waterman score: 1858; 86.061% identity (94.545% similar) in 330 aa overlap (49-368:197-526) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|739 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 170 180 190 200 210 220 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP ::::::::::::::::::::.:::::::::::::::::..::::::.::::.:: ::::: gi|739 NMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQERERGGPDEGVRGGHP 230 240 250 260 270 280 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::.:::.::::::::::::::.::.:: gi|739 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSTDSLPGPISRQPLGATSGASL 290 300 310 320 330 340 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :.:::::::::::::::::::::::::::::::::::::::::.:.::::::::::..:. gi|739 KTQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGTVVANSSSASPSVVAGN 350 360 370 380 390 400 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA .::::::::.::::::: ::::::::::.::::::::::::::::::::::::::::::: gi|739 TQNQNFSTAVNSQPQQRSQASGNQPPNILGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA 410 420 430 440 450 460 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :.::::: :::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|739 SNMASQRSVSSTGINFDNPSVQKALDTLIQSGPALSHLVNQTTAQVGRPQAPMGSYQRHY 470 480 490 500 510 520 >>gi|73992118|ref|XP_852980.1| PREDICTED: similar to nuc (573 aa) initn: 1855 init1: 1855 opt: 1855 Z-score: 1636.6 bits: 312.1 E(): 1.9e-82 Smith-Waterman score: 1858; 86.061% identity (94.545% similar) in 330 aa overlap (49-368:244-573) 20 30 40 50 60 mKIAA1 QHRGVPLTSAGGCQQRRLSLRHCHHPAAPDSPF---LHSQHHVRNTTRY-------REHR ::: . .::... . .::: gi|739 VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 220 230 240 250 260 270 70 80 90 100 110 120 mKIAA1 NMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGRGGHP ::::::::::::::::::::.:::::::::::::::::..::::::.::::.:: ::::: gi|739 NMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQERERGGPDEGVRGGHP 280 290 300 310 320 330 130 140 150 160 170 180 mKIAA1 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSL :::::::::::::::::::::::::::::::::::.:::.::::::::::::::.::.:: gi|739 PAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSTDSLPGPISRQPLGATSGASL 340 350 360 370 380 390 190 200 210 220 230 240 mKIAA1 KSQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSASPSVATGS :.:::::::::::::::::::::::::::::::::::::::::.:.::::::::::..:. gi|739 KTQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGTVVANSSSASPSVVAGN 400 410 420 430 440 450 250 260 270 280 290 300 mKIAA1 SQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA .::::::::.::::::: ::::::::::.::::::::::::::::::::::::::::::: gi|739 TQNQNFSTAVNSQPQQRSQASGNQPPNILGQAGSARNMGPRPGAPSQGLFGQPSSRLAPA 460 470 480 490 500 510 310 320 330 340 350 360 mKIAA1 STMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGRPQAPMGSYQRHY :.::::: :::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|739 SNMASQRSVSSTGINFDNPSVQKALDTLIQSGPALSHLVNQTTAQVGRPQAPMGSYQRHY 520 530 540 550 560 570 368 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 06:35:42 2009 done: Sun Mar 15 06:41:54 2009 Total Scan time: 849.920 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]