# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mid09080.fasta.nr -Q ../query/mKIAA1926.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1926, 400 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919162 sequences Expectation_n fit: rho(ln(x))= 5.0438+/-0.000186; mu= 12.5260+/- 0.010 mean_var=84.8830+/-16.343, 0's: 43 Z-trim: 50 B-trim: 25 in 1/66 Lambda= 0.139208 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47605664|sp|Q80WM4.2|HPLN4_MOUSE RecName: Full= ( 400) 2854 582.7 4.9e-164 gi|148696832|gb|EDL28779.1| hyaluronan and proteog ( 413) 2854 582.7 5e-164 gi|30349291|gb|AAP22050.1| hyaluronan and proteogl ( 400) 2847 581.3 1.3e-163 gi|149035980|gb|EDL90646.1| hyaluronan and proteog ( 400) 2810 573.9 2.2e-161 gi|109124008|ref|XP_001115151.1| PREDICTED: simila ( 402) 2612 534.1 2.1e-149 gi|109124010|ref|XP_001115139.1| PREDICTED: simila ( 437) 2605 532.7 5.9e-149 gi|47605684|sp|Q86UW8.1|HPLN4_HUMAN RecName: Full= ( 402) 2599 531.5 1.3e-148 gi|126323426|ref|XP_001365936.1| PREDICTED: simila ( 395) 1946 400.4 3.8e-109 gi|209155810|gb|ACI34137.1| Hyaluronan and proteog ( 390) 1608 332.5 1e-88 gi|94733594|emb|CAK05354.1| novel protein similar ( 344) 1509 312.5 9e-83 gi|224088065|ref|XP_002196379.1| PREDICTED: simila ( 264) 1293 269.0 8.6e-70 gi|149622117|ref|XP_001521634.1| PREDICTED: simila ( 545) 1234 257.5 5.3e-66 gi|224091677|ref|XP_002190848.1| PREDICTED: hyalur ( 354) 1231 256.7 5.9e-66 gi|148745013|gb|AAI42410.1| HAPLN3 protein [Bos ta ( 360) 1221 254.7 2.4e-65 gi|130309|sp|P07354.1|HPLN1_CHICK RecName: Full=Hy ( 355) 1220 254.5 2.7e-65 gi|126273826|ref|XP_001370515.1| PREDICTED: simila ( 362) 1219 254.3 3.2e-65 gi|73951441|ref|XP_851468.1| PREDICTED: similar to ( 362) 1217 253.9 4.2e-65 gi|109077867|ref|XP_001112341.1| PREDICTED: cartil ( 354) 1215 253.5 5.5e-65 gi|130311|sp|P10859.1|HPLN1_PIG RecName: Full=Hyal ( 354) 1213 253.1 7.3e-65 gi|149408431|ref|XP_001509283.1| PREDICTED: simila ( 354) 1213 253.1 7.3e-65 gi|73952134|ref|XP_849484.1| PREDICTED: similar to ( 354) 1212 252.9 8.3e-65 gi|189524679|ref|XP_697529.3| PREDICTED: hyalurona ( 353) 1211 252.7 9.6e-65 gi|2499842|sp|Q28381.1|HPLN1_HORSE RecName: Full=H ( 354) 1211 252.7 9.6e-65 gi|114599309|ref|XP_517666.2| PREDICTED: cartilage ( 354) 1209 252.3 1.3e-64 gi|194039626|ref|XP_001925657.1| PREDICTED: simila ( 360) 1209 252.3 1.3e-64 gi|1709660|sp|P55252.1|HPLN1_BOVIN RecName: Full=H ( 354) 1207 251.9 1.7e-64 gi|194206305|ref|XP_001916615.1| PREDICTED: simila ( 359) 1206 251.7 1.9e-64 gi|90075768|dbj|BAE87564.1| unnamed protein produc ( 353) 1205 251.5 2.2e-64 gi|130310|sp|P10915.2|HPLN1_HUMAN RecName: Full=Hy ( 354) 1205 251.5 2.2e-64 gi|34784736|gb|AAH57808.1| HAPLN1 protein [Homo sa ( 354) 1204 251.3 2.5e-64 gi|4218976|gb|AAD12253.1| link protein [Mus muscul ( 355) 1204 251.3 2.5e-64 gi|9978489|sp|Q9QUP5.1|HPLN1_MOUSE RecName: Full=H ( 356) 1204 251.3 2.5e-64 gi|56377975|dbj|BAD74165.1| hyaluronan proteoglyca ( 359) 1204 251.3 2.6e-64 gi|1346731|sp|P03994.2|HPLN1_RAT RecName: Full=Hya ( 354) 1203 251.1 2.9e-64 gi|44890689|gb|AAH66853.1| Hyaluronan and proteogl ( 356) 1202 250.9 3.4e-64 gi|118764374|gb|AAI28741.1| Hyaluronan and proteog ( 354) 1199 250.3 5.1e-64 gi|126321494|ref|XP_001363211.1| PREDICTED: simila ( 354) 1197 249.9 6.7e-64 gi|109082296|ref|XP_001090582.1| PREDICTED: simila ( 360) 1192 248.9 1.4e-63 gi|47605665|sp|Q80WM5.2|HPLN3_MOUSE RecName: Full= ( 359) 1188 248.1 2.4e-63 gi|30349289|gb|AAP22049.1| hyaluronan and proteogl ( 359) 1186 247.7 3.1e-63 gi|47605734|sp|Q96S86.1|HPLN3_HUMAN RecName: Full= ( 360) 1184 247.3 4.2e-63 gi|84569921|gb|AAI10475.1| Hyaluronan and proteogl ( 359) 1183 247.1 4.8e-63 gi|28277320|gb|AAH46259.1| MGC53495 protein [Xenop ( 359) 1181 246.7 6.3e-63 gi|158257638|dbj|BAF84792.1| unnamed protein produ ( 360) 1179 246.3 8.3e-63 gi|89269891|emb|CAJ83435.1| hyaluronan and proteog ( 359) 1176 245.7 1.3e-62 gi|114658757|ref|XP_001165450.1| PREDICTED: hyalur ( 360) 1176 245.7 1.3e-62 gi|60552295|gb|AAH91610.1| Usp12 protein [Xenopus ( 383) 1176 245.7 1.3e-62 gi|50417764|gb|AAH78043.1| LOC446245 protein [Xeno ( 394) 1167 243.9 4.7e-62 gi|80477845|gb|AAI08852.1| Unknown (protein for MG ( 359) 1166 243.7 5.1e-62 gi|47228555|emb|CAG05375.1| unnamed protein produc ( 319) 1149 240.2 5e-61 >>gi|47605664|sp|Q80WM4.2|HPLN4_MOUSE RecName: Full=Hyal (400 aa) initn: 2854 init1: 2854 opt: 2854 Z-score: 3101.3 bits: 582.7 E(): 4.9e-164 Smith-Waterman score: 2854; 100.000% identity (100.000% similar) in 400 aa overlap (1-400:1-400) 10 20 30 40 50 60 mKIAA1 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSH 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 RGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 RGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQ 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 NDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 NDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTFV 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA1 EAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGGTGSTGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 EAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGGTGSTGAG 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA1 GGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 GGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAK 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA1 VGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 VGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVY 310 320 330 340 350 360 370 380 390 400 mKIAA1 CYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV :::::::::::::::::::::::::::::::::::::::: gi|476 CYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 370 380 390 400 >>gi|148696832|gb|EDL28779.1| hyaluronan and proteoglyca (413 aa) initn: 2854 init1: 2854 opt: 2854 Z-score: 3101.2 bits: 582.7 E(): 5e-164 Smith-Waterman score: 2854; 100.000% identity (100.000% similar) in 400 aa overlap (1-400:14-413) 10 20 30 40 mKIAA1 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGS ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GKRTGRSARATTRMACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGS 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA1 VVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQH 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA1 RAFGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RAFGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFP 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA1 YHPRGGRYKMTFVEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YHPRGGRYKMTFVEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHA 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA1 REPCGGTGSTGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 REPCGGTGSTGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGA 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA1 VRACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VRACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSL 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA1 GFPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GFPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 370 380 390 400 410 >>gi|30349291|gb|AAP22050.1| hyaluronan and proteoglycan (400 aa) initn: 2847 init1: 2847 opt: 2847 Z-score: 3093.7 bits: 581.3 E(): 1.3e-163 Smith-Waterman score: 2847; 99.750% identity (99.750% similar) in 400 aa overlap (1-400:1-400) 10 20 30 40 50 60 mKIAA1 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSH 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 RGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQ ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|303 RGGTIVLPCRYHYEADAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQ 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 NDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 NDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTFV 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA1 EAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGGTGSTGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 EAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGGTGSTGAG 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA1 GGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 GGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAK 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA1 VGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 VGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVY 310 320 330 340 350 360 370 380 390 400 mKIAA1 CYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV :::::::::::::::::::::::::::::::::::::::: gi|303 CYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 370 380 390 400 >>gi|149035980|gb|EDL90646.1| hyaluronan and proteoglyca (400 aa) initn: 2810 init1: 2810 opt: 2810 Z-score: 3053.6 bits: 573.9 E(): 2.2e-161 Smith-Waterman score: 2810; 98.250% identity (99.500% similar) in 400 aa overlap (1-400:1-400) 10 20 30 40 50 60 mKIAA1 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSH 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 RGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQ 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 NDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTFV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::. gi|149 NDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPRGGRYKMTFA 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA1 EAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGGTGSTGAG ::::::::::::::::::::.::::::::::::::::::::::::.::: :::.:: ::: gi|149 EAQRACAEQDGILASAEQLHTAWRDGLDWCNAGWLRDGSVQYPVSQAREACGGSGSPGAG 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA1 GGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAK 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA1 VGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVY 310 320 330 340 350 360 370 380 390 400 mKIAA1 CYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV :::::::::::::::::::::::::::::::::::::::: gi|149 CYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 370 380 390 400 >>gi|109124008|ref|XP_001115151.1| PREDICTED: similar to (402 aa) initn: 1463 init1: 1418 opt: 2612 Z-score: 2838.6 bits: 534.1 E(): 2.1e-149 Smith-Waterman score: 2612; 91.337% identity (96.040% similar) in 404 aa overlap (1-400:1-402) 10 20 30 40 50 mKIAA1 MACAPGALGHRALWAVAWGLLLLV-PVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVS :.:: .::: ::::.:::.:::. : :::::::::::::::::::::::::::::::: gi|109 MVCARAALGPGALWAAAWGVLLLTAP--AGAQRGRKKVVHVLEGESGSVVVQTAPGQVVS 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 HRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAEL :::::::::::::::::::::::::::::::::::::.:::::::::::::: ::::::: gi|109 HRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAFGSYRGRAEL 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 QNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTF :.::::::::::::::::::::::::::::::::.::::::::::::::::::::::.:: gi|109 QGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPRGGRYKLTF 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 VEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGG---TGS .::::::::::::::::::::::::::::::::::::::::::::.. :::::: ::: gi|109 AEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPCGGLGGTGS 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 TGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGA :: :: .::::::::::::::::::::::::::::::::::::::: ..::.:::::::: gi|109 TGDGGDANGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAARACAARGA 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 TVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRL .::::::::::::::::::::::::::::::::::::: :::: ::::::::::::.::: gi|109 AVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRMRCGGRRPGVRSLGFPDATRRL 300 310 320 330 340 350 360 370 380 390 400 mKIAA1 FGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV ::::::::::::::::::::::::::::::::.::::::::::: gi|109 FGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLRV 360 370 380 390 400 >>gi|109124010|ref|XP_001115139.1| PREDICTED: similar to (437 aa) initn: 1463 init1: 1418 opt: 2605 Z-score: 2830.6 bits: 532.7 E(): 5.9e-149 Smith-Waterman score: 2605; 91.521% identity (96.010% similar) in 401 aa overlap (3-400:38-437) 10 20 30 mKIAA1 MACAPGALGHRALWAVAWGLLLLVPVLAGAQR :: .::: ::::.:::.:::. ::::: gi|109 AVGKAGPGGSQASERPRLGAGLSPVPVPQVCARAALGPGALWAAAWGVLLLTAP-AGAQR 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 GRKKVVHVLEGESGSVVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GRKKVVHVLEGESGSVVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVD 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 PLAFADVFVALGPQHRAFGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELED ::::.:::::::::::::: ::::::::.::::::::::::::::::::::::::::::: gi|109 PLAFTDVFVALGPQHRAFGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELED 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 DVGMVKLDLEGVVFPYHPRGGRYKMTFVEAQRACAEQDGILASAEQLHAAWRDGLDWCNA :.::::::::::::::::::::::.::.:::::::::::::::::::::::::::::::: gi|109 DAGMVKLDLEGVVFPYHPRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNA 190 200 210 220 230 240 220 230 240 250 260 mKIAA1 GWLRDGSVQYPVSHAREPCGG---TGSTGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNL ::::::::::::.. :::::: ::::: :: .:::::::::::::::::::::::::: gi|109 GWLRDGSVQYPVNRPREPCGGLGGTGSTGDGGDANGGVRNYGYRHNAEERYDAFCFTSNL 250 260 270 280 290 300 270 280 290 300 310 320 mKIAA1 PGRVFFLKPLRPVALAGAVRACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYP ::::::::::::: ..::.::::::::.:::::::::::::::::::::::::::::::: gi|109 PGRVFFLKPLRPVPFSGAARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYP 310 320 330 340 350 360 330 340 350 360 370 380 mKIAA1 IVNPRTRCGGPRPGVRSLGFPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGS ::::: :::: ::::::::::::.:::::::::::::::::::::::::::::::::::. gi|109 IVNPRMRCGGRRPGVRSLGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGA 370 380 390 400 410 420 390 400 mKIAA1 RDPAAWTPLRV ::::::::::: gi|109 RDPAAWTPLRV 430 >>gi|47605684|sp|Q86UW8.1|HPLN4_HUMAN RecName: Full=Hyal (402 aa) initn: 2613 init1: 1428 opt: 2599 Z-score: 2824.5 bits: 531.5 E(): 1.3e-148 Smith-Waterman score: 2599; 90.594% identity (96.535% similar) in 404 aa overlap (1-400:1-402) 10 20 30 40 50 mKIAA1 MACAPGALGHRALWAVAWGLLLLV-PVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVS :.:: .::: ::::.:::.:::. : :::::::::::::::::::::::::::::::: gi|476 MVCARAALGPGALWAAAWGVLLLTAP--AGAQRGRKKVVHVLEGESGSVVVQTAPGQVVS 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 HRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAEL :::::::::::::::::::::::::::::::::::::.:::::::::::::: ::::::: gi|476 HRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAFGSYRGRAEL 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 QNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTF :.::::::::::::::::::::::::::::::::.::::::::::::::::::::::.:: gi|476 QGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPRGGRYKLTF 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 VEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGG---TGS .::::::::::::::::::::::::::::::::::::::::::::.. :::::: ::: gi|476 AEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPCGGLGGTGS 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 TGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGA .:.:: .:::.::::::::::::::::::::::::::::::::::: ..::.:::::::: gi|476 AGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAARACAARGA 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 TVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRL .:::::::::::::::::::::::::::::::::::::.:::: ::::::::::::.::: gi|476 AVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRSLGFPDATRRL 300 310 320 330 340 350 360 370 380 390 400 mKIAA1 FGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV ::::::::::::::::::::::::::::::::.:::::::::.: gi|476 FGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV 360 370 380 390 400 >>gi|126323426|ref|XP_001365936.1| PREDICTED: similar to (395 aa) initn: 1995 init1: 1188 opt: 1946 Z-score: 2115.9 bits: 400.4 E(): 3.8e-109 Smith-Waterman score: 1971; 72.280% identity (86.010% similar) in 386 aa overlap (16-400:27-395) 10 20 30 40 mKIAA1 MACAPGALGHRALWAVAWGLLLLVP-VLAGAQRGRKKVVHVLEGESGSV . : ::... .:.:..:::::.::::: :::.: gi|126 MDMSLGFICLQPNLQGMGPFCQPVGIIIWILLVFAASALGGSDRGRKKIVHVLEDESGAV 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA1 VVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHR :::::::.::.::::::::::::::. .:: .: .:::::::.::::: :::::.: ..: gi|126 VVQTAPGKVVTHRGGTIVLPCRYHYDISAHDEDEIRLKWTKVTDPLAFRDVFVAMGKERR 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA1 AFGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPY ::: ::::. ::.::::::::..::::::::::::::::::::::.:::.::::::.::: gi|126 AFGSYRGRTSLQEDGPGDASLIIRNVTLQDYGRYECEVTNELEDDAGMVSLDLEGVIFPY 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA1 HPRGGRYKMTFVEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAR ::: ::: .:. ::::::::::::::: ::::::::.::::::::::.::::::::.. : gi|126 HPRLGRYTLTYPEAQRACAEQDGILASYEQLHAAWREGLDWCNAGWLQDGSVQYPVGQPR 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA1 EPCGGTGSTGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAV : :: : :::::::::. .:::::::::::: ..:::::: : :.. :: gi|126 EECGRRESPV-------GVRNYGYRHKEDERYDAFCFTSNLQSQVFFLKPYRKVSFPEAV 250 260 270 280 290 290 300 310 320 330 340 mKIAA1 RACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLG ::::. ::.:::::::.::::::::::: ::::.:::.::::::::.:::: :::::.:: gi|126 RACAGSGAAVAKVGQLYAAWKLQLLDRCEAGWLGDGSVRYPIVNPRARCGGQRPGVRNLG 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA1 FPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV ::: ..::::::::::::. ::. . ::::: :::.:: ::.: gi|126 FPDKKHRLFGVYCYRAPGSRDPGAARWGWGW----------RDPSAWRPLHV 360 370 380 390 >>gi|209155810|gb|ACI34137.1| Hyaluronan and proteoglyca (390 aa) initn: 1620 init1: 1012 opt: 1608 Z-score: 1749.1 bits: 332.5 E(): 1e-88 Smith-Waterman score: 1608; 65.774% identity (84.821% similar) in 336 aa overlap (28-363:28-356) 10 20 30 40 50 60 mKIAA1 MACAPGALGHRALWAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSH : :..::.::::::: ..:.:.::::::.:..: gi|209 MLSSQPLFLGTVTCLVLTFVLSVTSLPADAEKGRRKVVHVLEDDTGAVIVQTAPGKVITH 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 RGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQ :::.:.::::::.: . . .:.:::::.: :.: ::::::: :.:.:: ::::. :. gi|209 RGGSITLPCRYHHEPESSDPNRIRIKWTKVTDALVFEDVFVALGLQQRVFGLYRGRVSLE 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 NDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTFV ..::::::....::::.:::::::::::..:::.:.:.::::::::::.:: ::::... gi|209 QNGPGDASVIIHNVTLEDYGRYECEVTNDMEDDTGFVNLDLEGVVFPYYPRVGRYKLNYH 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA1 EAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGGTGSTGAG .:. .: :::.:::: ::: :: .::::::::::.:::::::.:: :. :: gi|209 QAEDVCKEQDAILASHAQLHKAWLEGLDWCNAGWLEDGSVQYPISHPRDQCGRKD----- 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 GGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAK : .:::::::::. .:::::::::::: :.:.::: .. : : ::.:: .. ::: gi|209 --TPAGVRNYGYRHKEDERYDAFCFTSNLNGKVYFLKRFKKVNYAEAVKACLRDSSMVAK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 VGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVY ::::.::::.:::::: :::: :.: ::::::::::::::.:::: ::::: . ::.::: gi|209 VGQLYAAWKIQLLDRCEAGWLEDASIRYPIVNPRTRCGGPQPGVRHLGFPDLKFRLYGVY 300 310 320 330 340 350 370 380 390 400 mKIAA1 CYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV :.: gi|209 CFRKNQENVNVDVVKLTQRQGKSSKDIPMNTTSTRTI 360 370 380 390 >>gi|94733594|emb|CAK05354.1| novel protein similar to v (344 aa) initn: 1522 init1: 908 opt: 1509 Z-score: 1642.3 bits: 312.5 E(): 9e-83 Smith-Waterman score: 1509; 64.688% identity (82.812% similar) in 320 aa overlap (44-363:7-319) 20 30 40 50 60 70 mKIAA1 WAVAWGLLLLVPVLAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSHRGGTIVLPCRYHY ..:.:.::::::.::.::::::.::::::. gi|947 MFNGKDDTGAVIVQTAPGKVVTHRGGTITLPCRYHH 10 20 30 80 90 100 110 120 130 mKIAA1 EAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRAFGPYRGRAELQNDGPGDASLVLRN : . .:.::::: : . : ::::::: :..::: :. :. :.. ::::::....: gi|947 EPEDIDPNRIRIKWTKVSDAFQFEDVFVALGRQQKAFGSYQERVSLEQAGPGDASVIIHN 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 VTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYHPRGGRYKMTFVEAQRACAEQDGIL .::.:::::::::::..:::.:.:.::::::::::.: .::::... .:...: :::.:: gi|947 ITLEDYGRYECEVTNDMEDDTGFVNLDLEGVVFPYYPPSGRYKLNYHQAEEVCREQDAIL 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 ASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHAREPCGGTGSTGAGGGTNGGVRNYGYR :: ::: :: .::::::::::.:::::::.:: :. :: : :::::::: gi|947 ASHPQLHKAWLEGLDWCNAGWLEDGSVQYPISHPRDQCGRKDSPP-------GVRNYGYR 160 170 180 190 200 260 270 280 290 300 310 mKIAA1 HNAEERYDAFCFTSNLPGRVFFLKPLRPVALAGAVRACAARGATVAKVGQLFAAWKLQLL :. .:::::::::::: :::.::: .. : ::.:: :: .::::::.::::.::: gi|947 HKDDERYDAFCFTSNLNGRVYFLKRFKKVNYLEAVKACQRDGAFIAKVGQLYAAWKIQLL 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA1 DRCTAGWLADGSARYPIVNPRTRCGGPRPGVRSLGFPDASRRLFGVYCYRAPGAPDPAPG ::: :::. ::: ::::::::.::::: ::::.::::: . ::.::::.: gi|947 DRCEAGWVEDGSIRYPIVNPRARCGGPDPGVRNLGFPDKKFRLYGVYCFRKNTDIQSTQT 270 280 290 300 310 320 380 390 400 mKIAA1 GWGWGWAGGGGWAGGSRDPAAWTPLRV gi|947 PTETTSKMANSTRSI 330 340 400 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 10:44:16 2009 done: Mon Mar 16 10:50:41 2009 Total Scan time: 875.300 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]