FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1567.ptfa, 668 aa vs ./tmplib.26680 library 1768349 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.4278+/-0.00414; mu= 17.6693+/- 0.278 mean_var=81.4185+/-19.036, 0's: 0 Z-trim: 3 B-trim: 142 in 1/35 Lambda= 0.1421 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4215 ( 703 res) mph01538 ( 703) 1425 302 1e-82 >>mKIAA4215 ( 703 res) mph01538 (703 aa) initn: 2694 init1: 1349 opt: 1425 Z-score: 1577.5 bits: 302.3 E(): 1e-82 Smith-Waterman score: 3609; 74.965% identity (82.083% ungapped) in 715 aa overlap (4-668:1-703) 10 20 30 40 50 60 mKIAA1 VPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNM ...:::::. ::::::::::::::::. :: .::::::::::::::::::..:.: mKIAA4 ETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKM 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 MLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHCG ::::::::::::.:::.:::.:::::...:.:: :::::::::::::::.:::::.:::: mKIAA4 MLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCG 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 QMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYSLQLKHPHLPCLQVGQE :::::::::::::::::::::::: :.::..:::::::::....: :..::::::::::: mKIAA4 QMKRKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQE 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 QKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSMVGGPD ::::::::::::::::::::::::::::::::.::::::::::::::.:..: :. . : mKIAA4 QKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSASF--NTD 180 190 200 210 220 230 250 mKIAA1 PYLKEFGIVVHNEMT--------------------------------------------- ::..::::.:..::: mKIAA4 PYVREFGIMVKDEMTDVTGRVLQPPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVW 240 250 260 270 280 290 260 270 280 290 300 310 mKIAA1 ---CF--RLQCCSMEAGSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMT :: . :: .. :::.::::::.::::::::::::::::::::::::::.::: : mKIAA4 AIACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNT 300 310 320 330 340 350 320 330 340 350 360 370 mKIAA1 YVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKMNAKL :.::::.::::::::::::::::::::.:::::::::.::: .:.::::::::::.:.:: mKIAA4 YAGLQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKL 360 370 380 390 400 410 380 390 400 410 420 430 mKIAA1 GGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRV ::.::.:.:. :: ::::::::::::::::::::::::::::::::::.::.:::::::: mKIAA4 GGVNNILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPNRYCATVRV 420 430 440 450 460 470 440 450 460 470 480 490 mKIAA1 QTSRQEITQELLYSQEVVQDLTSMAWELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAW : :::: .:::..:. ::::::::::::::::::.:: ::::::..:: mKIAA4 QQHRQEI----------IQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLH 480 490 500 510 520 500 510 520 530 540 550 mKIAA1 PELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCADKMERVGKSGNVPAGTTVDSTVT ::.:::.:::.::.::.::::.:::::::::::::.:: ::::::::.:::::::. .: mKIAA4 HELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKIT 530 540 550 560 570 580 560 570 580 590 600 610 mKIAA1 HPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPA ::.:::::::::::::::::::::.:::::: :..::::.:::::::::::::::::::: mKIAA4 HPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPA 590 600 610 620 630 640 620 630 640 650 660 mKIAA1 PAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTQHTMYFA :::::.:::::::::::::.::::::::.:::::::: ::::::::.:.:: .::::: mKIAA4 PAYYAHLVAFRARYHLVDKEHDSAEGSHTSGQSNGRDHQALAKAVQVHQDTLRTMYFA 650 660 670 680 690 700 668 residues in 1 query sequences 1768349 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:48:27 2006 done: Mon Mar 27 10:48:28 2006 Scan time: 0.750 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]