# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mid07075.fasta.nr -Q ../query/mKIAA4193.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4193, 703 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7910676 sequences Expectation_n fit: rho(ln(x))= 6.3111+/-0.000192; mu= 8.0757+/- 0.011 mean_var=105.8202+/-20.966, 0's: 37 Z-trim: 84 B-trim: 257 in 1/66 Lambda= 0.124678 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|40796184|gb|AAH65172.1| Hnrpm protein [Mus musc ( 690) 4654 848.0 0 gi|74204715|dbj|BAE35426.1| unnamed protein produc ( 690) 4649 847.1 0 gi|16124253|gb|AAA83442.2| M4 protein [Rattus norv ( 697) 4630 843.7 0 gi|158186696|ref|NP_446328.2| heterogeneous nuclea ( 690) 4618 841.5 0 gi|71152132|sp|Q62826.4|HNRPM_RAT RecName: Full=He ( 690) 4605 839.2 0 gi|16905456|gb|AAL31359.1|L32611_1 ribonucleoprote ( 691) 4549 829.1 0 gi|3126878|gb|AAC16002.1| M4 protein deletion muta ( 691) 4516 823.2 0 gi|220941777|emb|CAX15841.1| heterogeneous nuclear ( 640) 4299 784.1 0 gi|73986965|ref|XP_868359.1| PREDICTED: similar to ( 587) 3916 715.2 1.7e-203 gi|149031665|gb|EDL86628.1| rCG37572, isoform CRA_ ( 571) 3840 701.5 2.1e-199 gi|73986967|ref|XP_868362.1| PREDICTED: similar to ( 672) 3841 701.7 2.1e-199 gi|114675116|ref|XP_001158806.1| PREDICTED: hetero ( 672) 3838 701.2 3.1e-199 gi|119589329|gb|EAW68923.1| heterogeneous nuclear ( 571) 3805 695.2 1.7e-197 gi|55976201|sp|Q9D0E1.3|HNRPM_MOUSE RecName: Full= ( 729) 3611 660.4 6.5e-187 gi|56789218|gb|AAH88317.1| Heterogeneous nuclear r ( 535) 3606 659.4 9.5e-187 gi|149031664|gb|EDL86627.1| rCG37572, isoform CRA_ ( 610) 3591 656.7 6.8e-186 gi|158186698|ref|NP_001103381.1| heterogeneous nuc ( 729) 3591 656.8 7.9e-186 gi|149031663|gb|EDL86626.1| rCG37572, isoform CRA_ ( 731) 3591 656.8 7.9e-186 gi|73986955|ref|XP_854270.1| PREDICTED: similar to ( 730) 3559 651.0 4.3e-184 gi|1200089|emb|CAA50897.1| ORF [Homo sapiens] ( 570) 3556 650.4 5.1e-184 gi|119589328|gb|EAW68922.1| heterogeneous nuclear ( 610) 3556 650.4 5.4e-184 gi|119894863|ref|XP_001253663.1| PREDICTED: hetero ( 730) 3557 650.7 5.5e-184 gi|114675130|ref|XP_001159175.1| PREDICTED: hetero ( 626) 3556 650.4 5.5e-184 gi|55977747|sp|P52272.3|HNRPM_HUMAN RecName: Full= ( 730) 3556 650.5 6.2e-184 gi|119589327|gb|EAW68921.1| heterogeneous nuclear ( 730) 3556 650.5 6.2e-184 gi|187281|gb|AAA36192.1| M4 protein ( 729) 3547 648.9 1.9e-183 gi|148678255|gb|EDL10202.1| heterogeneous nuclear ( 527) 3535 646.6 6.6e-183 gi|73986969|ref|XP_868365.1| PREDICTED: similar to ( 679) 3481 637.0 6.7e-180 gi|114675104|ref|XP_001158845.1| PREDICTED: hetero ( 679) 3478 636.4 9.8e-180 gi|126323781|ref|XP_001365846.1| PREDICTED: simila ( 699) 3391 620.8 5.1e-175 gi|126323785|ref|XP_001365966.1| PREDICTED: simila ( 727) 3273 599.6 1.3e-168 gi|220941776|emb|CAX15840.1| heterogeneous nuclear ( 679) 3256 596.5 1e-167 gi|74177661|dbj|BAE38931.1| unnamed protein produc ( 679) 3250 595.4 2.2e-167 gi|114675114|ref|XP_001159124.1| PREDICTED: hetero ( 697) 3216 589.3 1.5e-165 gi|114675118|ref|XP_001158329.1| PREDICTED: hetero ( 692) 3201 586.6 9.9e-165 gi|114675138|ref|XP_001158631.1| PREDICTED: hetero ( 468) 3158 578.8 1.5e-162 gi|114675122|ref|XP_001158275.1| PREDICTED: hetero ( 670) 3063 561.8 2.9e-157 gi|73986963|ref|XP_533929.2| PREDICTED: similar to ( 568) 2947 540.9 4.8e-151 gi|114675128|ref|XP_001158691.1| PREDICTED: hetero ( 568) 2944 540.3 7e-151 gi|33874022|gb|AAH08895.2| HNRPM protein [Homo sap ( 425) 2840 521.5 2.4e-145 gi|73986959|ref|XP_868350.1| PREDICTED: similar to ( 692) 2814 517.0 8.9e-144 gi|73986961|ref|XP_868354.1| PREDICTED: similar to ( 595) 2625 483.0 1.4e-133 gi|73986971|ref|XP_868367.1| PREDICTED: similar to ( 715) 2625 483.0 1.6e-133 gi|114675136|ref|XP_001158566.1| PREDICTED: hetero ( 595) 2622 482.4 2e-133 gi|62089046|dbj|BAD92970.1| heterogeneous nuclear ( 615) 2622 482.4 2e-133 gi|114675108|ref|XP_512342.2| PREDICTED: heterogen ( 676) 2622 482.5 2.2e-133 gi|114675110|ref|XP_001159225.1| PREDICTED: hetero ( 715) 2622 482.5 2.3e-133 gi|13543181|gb|AAH05758.1| Hnrpm protein [Mus musc ( 386) 2602 478.7 1.7e-132 gi|74208457|dbj|BAE37519.1| unnamed protein produc ( 366) 2463 453.7 5.5e-125 gi|126323783|ref|XP_001365907.1| PREDICTED: simila ( 738) 2448 451.2 6.2e-124 >>gi|40796184|gb|AAH65172.1| Hnrpm protein [Mus musculus (690 aa) initn: 4654 init1: 4654 opt: 4654 Z-score: 4526.2 bits: 848.0 E(): 0 Smith-Waterman score: 4654; 100.000% identity (100.000% similar) in 690 aa overlap (14-703:1-690) 10 20 30 40 50 60 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK ::::::::::::::::::::::::::::::::::::::::::::::: gi|407 MAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK 10 20 30 40 70 80 90 100 110 120 mKIAA4 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME 590 600 610 620 630 640 670 680 690 700 mKIAA4 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA ::::::::::::::::::::::::::::::::::::::::::: gi|407 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA 650 660 670 680 690 >>gi|74204715|dbj|BAE35426.1| unnamed protein product [M (690 aa) initn: 4649 init1: 4649 opt: 4649 Z-score: 4521.4 bits: 847.1 E(): 0 Smith-Waterman score: 4649; 99.855% identity (100.000% similar) in 690 aa overlap (14-703:1-690) 10 20 30 40 50 60 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK ::::::::::::::::::::::::::::::::::::::::::::::: gi|742 MAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK 10 20 30 40 70 80 90 100 110 120 mKIAA4 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NLGPVGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME 590 600 610 620 630 640 670 680 690 700 mKIAA4 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA ::::::::::::::::::::::::::::::::::::::::::: gi|742 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA 650 660 670 680 690 >>gi|16124253|gb|AAA83442.2| M4 protein [Rattus norvegic (697 aa) initn: 4630 init1: 4630 opt: 4630 Z-score: 4502.9 bits: 843.7 E(): 0 Smith-Waterman score: 4630; 98.847% identity (99.712% similar) in 694 aa overlap (10-703:4-697) 10 20 30 40 50 60 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK :::::::::::::::::::::::::::::::::::::: :::::::::::: gi|161 SARDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPVPKGEERPTQNEK 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|161 RKEKNIKRGGNRFEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA4 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|161 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA4 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|161 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGMG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA4 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA4 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 KQGGSGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA4 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA4 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|161 IERMGSGVERMGPAIERMGLSMDRMVPTGMGAGLERMGPVMDRMATGLERMGANNLERMG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA4 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|161 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRTIEMER 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA4 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|161 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME 600 610 620 630 640 650 670 680 690 700 mKIAA4 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA ::::::::::::::::::::::::::::::::::::::::::: gi|161 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA 660 670 680 690 >>gi|158186696|ref|NP_446328.2| heterogeneous nuclear ri (690 aa) initn: 4618 init1: 4618 opt: 4618 Z-score: 4491.3 bits: 841.5 E(): 0 Smith-Waterman score: 4618; 99.130% identity (99.710% similar) in 690 aa overlap (14-703:1-690) 10 20 30 40 50 60 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK :::::::::::::::::::::::::::::::::: :::::::::::: gi|158 MAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPVPKGEERPTQNEK 10 20 30 40 70 80 90 100 110 120 mKIAA4 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|158 RKEKNIKRGGNRFEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|158 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|158 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGMG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|158 IERMGSGVERMGPAIERMGLSMDRMVPTGMGAGLERMGPVMDRMATGLERMGANNLERMG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME 590 600 610 620 630 640 670 680 690 700 mKIAA4 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA ::::::::::::::::::::::::::::::::::::::::::: gi|158 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA 650 660 670 680 690 >>gi|71152132|sp|Q62826.4|HNRPM_RAT RecName: Full=Hetero (690 aa) initn: 4605 init1: 4605 opt: 4605 Z-score: 4478.6 bits: 839.2 E(): 0 Smith-Waterman score: 4605; 98.841% identity (99.710% similar) in 690 aa overlap (14-703:1-690) 10 20 30 40 50 60 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK :::::::::::::::::::::::::::::::::: :::::::::::: gi|711 MAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPVPKGEERPTQNEK 10 20 30 40 70 80 90 100 110 120 mKIAA4 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|711 RKEKNIKRGGNRFEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|711 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|711 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGMG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 KQGGSGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|711 IERMGSGVERMGPAIERMGLSMDRMVPTGMGAGLERMGPVMDRMATGLERMGANNLERMG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|711 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRTIEMER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME 590 600 610 620 630 640 670 680 690 700 mKIAA4 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA ::::::::::::::::::::::::::::::::::::::::::: gi|711 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA 650 660 670 680 690 >>gi|16905456|gb|AAL31359.1|L32611_1 ribonucleoprotein [ (691 aa) initn: 4329 init1: 4329 opt: 4549 Z-score: 4424.2 bits: 829.1 E(): 0 Smith-Waterman score: 4549; 97.540% identity (99.421% similar) in 691 aa overlap (14-703:1-691) 10 20 30 40 50 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGE-ERPTQNE ::::::::::::::: ::::::::: ::::::::::::: :::.::: gi|169 MAAGVEAAAEVAATEIKMEEESGAPGVPSGNGAPGPKGEGERPAQNE 10 20 30 40 60 70 80 90 100 110 mKIAA4 KRKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|169 KRKEKNIKRGGNRFEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 EGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 EGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTV 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 FVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNG ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|169 FVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNG 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 QLLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGM ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|169 QLLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGM 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 GNLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEII ::.::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|169 GNIGPAGMGMEGIGFGINKMGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEII 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 AKQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGS :::::::.::::::::::::::::..:::::::::::::::::::::::::::::::::: gi|169 AKQGGGGGGGSVPGIERMGPGIDRLGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGS 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 VERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQ ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 VERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQ 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 TIERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERM :::::::::::::::::::::::.::::.::::.:::::::::::::::::::::::::: gi|169 TIERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERM 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 GLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEME :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|169 GLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEME 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 RGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 RGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKM 590 600 610 620 630 640 660 670 680 690 700 mKIAA4 ENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA :::::::::::::::::::::::::::::::::::::::::::: gi|169 ENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA 650 660 670 680 690 >>gi|3126878|gb|AAC16002.1| M4 protein deletion mutant [ (691 aa) initn: 4307 init1: 4307 opt: 4516 Z-score: 4392.1 bits: 823.2 E(): 0 Smith-Waterman score: 4516; 97.106% identity (98.987% similar) in 691 aa overlap (14-703:1-691) 10 20 30 40 50 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGE-ERPTQNE ::::::::::::::: ::::::::: ::::::: ::::: :::.::: gi|312 MAAGVEAAAEVAATEIKMEEESGAPGVPSGNGASGPKGEGERPAQNE 10 20 30 40 60 70 80 90 100 110 mKIAA4 KRKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|312 KRKEKNIKRGGNRFEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 EGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTV :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|312 EGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGECARRAMQKAGRLGSTV 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 FVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNG ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|312 FVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNG 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 QLLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGM ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|312 QLLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGM 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 GNLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEII ::.::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|312 GNIGPAGMGMEGIGFGINKMGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEII 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 AKQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGS :::::::.::::::::::::::::..:::::::::::::::::::::::::::::::::: gi|312 AKQGGGGGGGSVPGIERMGPGIDRLGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGS 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 VERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQ ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 VERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQ 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 TIERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERM :::::::::::::::::::: ::.::::.::::.:::::::::::::::::::::::::: gi|312 TIERMGSGVERMGPAIERMGPSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERM 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 GLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEME :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|312 GLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEME 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 RGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 RGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKM 590 600 610 620 630 640 660 670 680 690 700 mKIAA4 ENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA :::::::::::::::::::::::::::::::::::::::::::: gi|312 ENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA 650 660 670 680 690 >>gi|220941777|emb|CAX15841.1| heterogeneous nuclear rib (640 aa) initn: 4299 init1: 4299 opt: 4299 Z-score: 4181.6 bits: 784.1 E(): 0 Smith-Waterman score: 4299; 100.000% identity (100.000% similar) in 637 aa overlap (14-650:1-637) 10 20 30 40 50 60 mKIAA4 RARSLTQSPDAEKMAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK ::::::::::::::::::::::::::::::::::::::::::::::: gi|220 MAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGEERPTQNEK 10 20 30 40 70 80 90 100 110 120 mKIAA4 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 RKEKNIKRGGNRFEPYSNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVF 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 VANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 LLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMG 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 NLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 KQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 ERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 IERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMDRMATGLERMGANNLERMG 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGAGGASFDRAIEMER 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME :::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGDLD 590 600 610 620 630 640 670 680 690 700 mKIAA4 NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA >>gi|73986965|ref|XP_868359.1| PREDICTED: similar to Het (587 aa) initn: 3916 init1: 3916 opt: 3916 Z-score: 3809.8 bits: 715.2 E(): 1.7e-203 Smith-Waterman score: 3916; 98.126% identity (99.830% similar) in 587 aa overlap (117-703:1-587) 90 100 110 120 130 140 mKIAA4 ITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNK :::::::::::::::::::::::::::::: gi|739 MDAEGKSRGCAVVEFKMEESMKKAAEVLNK 10 20 30 150 160 170 180 190 200 mKIAA4 HSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRA 40 50 60 70 80 90 210 220 230 240 250 260 mKIAA4 DILEDKDGKSRGIGIVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPER :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|739 DILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPER 100 110 120 130 140 150 270 280 290 300 310 320 mKIAA4 PQQLPHGLGGIGMGLGPGGQPIDANHLSKGIGMGNLGPAGMGMEGIGFGINKIGGMEGPF :::::::::::::::::::::::::::.:::::::.::::::::::::::::.::::::: gi|739 PQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGIGFGINKMGGMEGPF 160 170 180 190 200 210 330 340 350 360 370 380 mKIAA4 GGGMENMGRFGSGMNMGRINEILSNALKRGEIIAKQGGGGAGGSVPGIERMGPGIDRISG ::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::.: gi|739 GGGMENMGRFGSGMNMGRINEILSNALKRGEIIAKQGGGGGGGSVPGIERMGPGIDRIGG 220 230 240 250 260 270 390 400 410 420 430 440 mKIAA4 AGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSVERMGSSIERMGPLGLDHMASSIERMG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|739 AGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSVERMGSGIERMGPLGLDHMASSIERMG 280 290 300 310 320 330 450 460 470 480 490 500 mKIAA4 QTMERIGSGVERMGAGMGFGLERMAAPIDRVGQTIERMGSGVERMGPAIERMGLSMDRMV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|739 QTMERIGSGVERMGAGMGFGLERMAAPIDRVGQTIERMGSGVERMGPAIERMGLSMERMV 340 350 360 370 380 390 510 520 530 540 550 560 mKIAA4 PTGMGASLERMGPVMDRMATGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMG :.::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PAGMGAGLERMGPVMDRMATGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMG 400 410 420 430 440 450 570 580 590 600 610 620 mKIAA4 PAMGPALGAGIERMGLAMGGAGGASFDRAIEMERGNFGGSFAGSFGGAGGHAPGVARKAC ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 PAMGPALGAGIERMGLAMGGGGGASFDRAIEMERGNFGGSFAGSFGGAGGHAPGVARKAC 460 470 480 490 500 510 630 640 650 660 670 680 mKIAA4 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMN 520 530 540 550 560 570 690 700 mKIAA4 GMKLSGREIDVRIDRNA ::::::::::::::::: gi|739 GMKLSGREIDVRIDRNA 580 >>gi|149031665|gb|EDL86628.1| rCG37572, isoform CRA_c [R (571 aa) initn: 3840 init1: 3840 opt: 3840 Z-score: 3736.1 bits: 701.5 E(): 2.1e-199 Smith-Waterman score: 3840; 99.299% identity (99.825% similar) in 571 aa overlap (133-703:1-571) 110 120 130 140 150 160 mKIAA4 VKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDG :::::::::::::::::::::::::::::: gi|149 MEESMKKAAEVLNKHSLSGRPLKVKEDPDG 10 20 30 170 180 190 200 210 220 mKIAA4 EHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|149 EHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTV 40 50 60 70 80 90 230 240 250 260 270 280 mKIAA4 TFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHGLGGIGMGLG 100 110 120 130 140 150 290 300 310 320 330 340 mKIAA4 PGGQPIDANHLSKGIGMGNLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNM :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGGQPIDANHLNKGIGMGNLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMGRFGSGMNM 160 170 180 190 200 210 350 360 370 380 390 400 mKIAA4 GRINEILSNALKRGEIIAKQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GRINEILSNALKRGEIIAKQGGGGAGGSVPGIERMGPGIDRISGAGMERMGAGLGHGMDR 220 230 240 250 260 270 410 420 430 440 450 460 mKIAA4 VGSEIERMGLVMDRMGSVERMGSSIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAG :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|149 VGSEIERMGLVMDRMGSVERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAG 280 290 300 310 320 330 470 480 490 500 510 520 mKIAA4 MGFGLERMAAPIDRVGQTIERMGSGVERMGPAIERMGLSMDRMVPTGMGASLERMGPVMD ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|149 MGFGLERMAAPIDRVGQTIERMGSGVERMGPAIERMGLSMDRMVPTGMGAGLERMGPVMD 340 350 360 370 380 390 530 540 550 560 570 580 mKIAA4 RMATGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RMATGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGL 400 410 420 430 440 450 590 600 610 620 630 640 mKIAA4 AMGGAGGASFDRAIEMERGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AMGGAGGASFDRAIEMERGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKML 460 470 480 490 500 510 650 660 670 680 690 700 mKIAA4 KDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRN 520 530 540 550 560 570 mKIAA4 A : gi|149 A 703 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 00:49:25 2009 done: Wed Mar 18 00:57:23 2009 Total Scan time: 1055.050 Total Display time: 0.270 Function used was FASTA [version 34.26.5 April 26, 2007]